mRNA_P-fluviatile_contig12.1615.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A6H5L128_9PHAE (COX assembly mitochondrial protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L128_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.260e-39 Identity = 71/89 (79.78%), Postives = 81/89 (91.01%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNASFQQELELRQKELEQEQREQAGR 392
MHPPL RPHPSC EEVK+L+ACHEE+PYGKFFGACND K+ALD CF +EKEEKRRKNL +ARRF+A FQ+ELELR+KELEQEQ +QAGR
Sbjct: 1 MHPPLLRPHPSCHEEVKMLMACHEENPYGKFFGACNDLKLALDSCFVLEKEEKRRKNLAKARRFDAGFQKELELRRKELEQEQ-QQAGR 88
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: F0Y773_AURAN (COX assembly mitochondrial protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y773_AURAN) HSP 1 Score: 97.8 bits (242), Expect = 4.590e-22 Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNASFQQELELRQ 353
MHPPL RPHP C V +LV CH+E+PYGKF+GACND K A+D CFK EKEEKRR N E+ R FN ++++ + R+
Sbjct: 1 MHPPLYRPHPKCAALVDLLVKCHDENPYGKFWGACNDEKAAMDWCFKEEKEEKRRANFEKTRSFNEEWRKKQDARE 76
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A8J2WQW2_9STRA (COX assembly mitochondrial protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQW2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.340e-20 Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNAS 326
MHPPL RPHP C V LV CH+ + YGKF+GACND K A+D CFK EK+EKRR+NL +AR F+A+
Sbjct: 1 MHPPLYRPHPKCAALVDALVECHDANVYGKFWGACNDQKAAMDACFKAEKDEKRRENLRKARAFDAA 67
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: K3WST6_GLOUD (COX assembly mitochondrial protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WST6_GLOUD) HSP 1 Score: 89.7 bits (221), Expect = 6.270e-19 Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNASFQQELELR 350
MH PL RPHP CQE + L CHEE+P KFFGACN+ KVALD CFK EKE KR +NL +AR +A +Q+++ R
Sbjct: 1 MHAPLDRPHPDCQEVIMALNLCHEENPRMKFFGACNEAKVALDKCFKKEKERKRDENLRRARASDAYVRQKMKER 75
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: F0WMZ2_9STRA (COX assembly mitochondrial protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMZ2_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.100e-18 Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNL 299
MHPPL RPHP CQ+ +K L CH E+P KF GACN+ K ALDDCF+MEKEEKR++NL
Sbjct: 1 MHPPLDRPHPLCQQVIKNLKQCHTENPRAKFLGACNEAKRALDDCFRMEKEEKRKQNL 58
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A0P1AB85_PLAHL (COX assembly mitochondrial protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB85_PLAHL) HSP 1 Score: 86.3 bits (212), Expect = 1.200e-17 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNASFQQELELRQKELEQEQR 377
MH PL RPHP CQ E+K L+ CH ++PY KFFGACND K ALD CFK EK R +NL A+ +A +++++ R+ + E++
Sbjct: 1 MHAPLDRPHPDCQIEIKALLDCHNDNPYAKFFGACNDVKSALDQCFKKEKIRIRSENLRHAKASDAYVRRKMQERRDRVAAEEK 84
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A835ZCC5_9STRA (COX assembly mitochondrial protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.970e-17 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNASFQQELELRQ 353
MHPPL +PHP CQE V+ LV CH+E+PYGKF GACN+ K ALD CF+ EK + + N+E A+ + +Q RQ
Sbjct: 1 MHPPLFKPHPMCQEMVEQLVKCHDENPYGKFLGACNEAKTALDKCFRQEKIARYKANMESAKAMDEKRRQRTAERQ 76
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A024FTV6_9STRA (COX assembly mitochondrial protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FTV6_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.700e-16 Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNL 299
MHPPL RPHP CQ+ ++ L CH ++P KF GACN+ K ALD+CF+ EKEEKRR+NL
Sbjct: 1 MHPPLDRPHPLCQKVIQNLKKCHADNPRRKFIGACNEAKRALDECFRKEKEEKRRQNL 58
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A2R5GHB7_9STRA (COX assembly mitochondrial protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHB7_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.920e-16 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQAR 311
MHPPL RPHP CQ+ + L CHE++PY KF G+CN+ K ALD CF+ EKE R+ N E+AR
Sbjct: 1 MHPPLDRPHPYCQDVIDALRKCHEDNPYMKFLGSCNEPKAALDQCFRAEKEVMRKANAERAR 62
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Match: A0A024TQ03_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ03_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.400e-15 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 3
Query: 126 MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKEEKRRKNLEQARRFNASF 329
MH L +PHP CQ V L CH E+PYGKF GACND K AL++CF E +R+ N+++AR FN +
Sbjct: 1 MHSSLDKPHPECQAIVDALRECHAENPYGKFVGACNDMKAALNECFAKENAFRRKVNMDKARAFNKEW 68 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1615.1 >prot_P-fluviatile_contig12.1615.1 ID=prot_P-fluviatile_contig12.1615.1|Name=mRNA_P-fluviatile_contig12.1615.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=90bp MHPPLKRPHPSCQEEVKVLVACHEEHPYGKFFGACNDFKVALDDCFKMEKback to top mRNA from alignment at P-fluviatile_contig12:3567285..3570399- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1615.1 ID=mRNA_P-fluviatile_contig12.1615.1|Name=mRNA_P-fluviatile_contig12.1615.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3115bp|location=Sequence derived from alignment at P-fluviatile_contig12:3567285..3570399- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3567285..3570399- >mRNA_P-fluviatile_contig12.1615.1 ID=mRNA_P-fluviatile_contig12.1615.1|Name=mRNA_P-fluviatile_contig12.1615.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=540bp|location=Sequence derived from alignment at P-fluviatile_contig12:3567285..3570399- (Porterinema fluviatile SAG_2381)back to top |