mRNA_P-fluviatile_contig12.1612.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1612.1
Unique NamemRNA_P-fluviatile_contig12.1612.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: D8LST8_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST8_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 9.520e-175
Identity = 305/491 (62.12%), Postives = 351/491 (71.49%), Query Frame = 1 
Query:   19 MIYQLLGVWFSGAPWHPTAAFQHHIPLLQQRSETTLVKHGARRQLRRLALCATS----PAHDNRSCHPMPPDSSSSGSTVPKWLNLPPSRSAVNPGRSSALGVTESRNRRCGP--ISLTRSDLLDGLAAAVLGAAATAVTPRCALAATAEGENVVGETKIDSMPAPGGVVEGG-----EGKYKVASDEVGVLFGDGPIGVKLGENPLKATGVCRVYVTEVLKGSQAMRQADLRAGFGVAAVGGKAAEKLQPQEVAELIRISPRPMEIVFRDPELLAQRLQAEGDKKAKAARRSRRKAAGDAASPETEA----------TNVDARSGSAG-GGSDSAAGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNPSDVRTNFYTDDPCDAAAIAAGNASGQCNK 1425
            +++ L+G +   + WH   AF+    L Q+  E T  KH   R  R +  C+       A  ++      P  S+SG   P+      S +AV    ++  G +     RCG   +SLTR+ LL  +A A  G     + PR A AA  E   +V E       A  G V GG       KY V SDEVGVLFGDGPIG+KLG+NPLKA+GVCRVYVTEVL GSQA+RQA+LRAGFGVAAVGGK AE+L+P+EVAELIR+SPRPMEIVFRDPELL +RLQAE D+KA+A +R ++KAA DAASPET A          T VD RSGS G GG  +++GELRVTQVGKKP VCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDV+KGLDLSLFDMCVGE+RKIEIPARLAYGRKGSK FG+PPDDG GSADVVFGVELVSINFS+N SD R NFYTDDPCDAAA+AAGNASGQC K
Sbjct:    2 LLFHLVGGFLLVSFWHSAGAFRTGAALAQRGCERTSGKHD--RICREIEPCSAGRRSLSADASKGGWCASPQDSTSG---PREALAATSSAAV----ATMAGSSTEAVGRCGATAVSLTRNQLLSSMATAAAG---FLLAPRQASAADVE-TTLVSEAASTGPAAGQGEVGGGVEEVAAAKYVVQSDEVGVLFGDGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRRKQKAAADAASPETAAPDTGDSATATTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARDNFYTDDPCDAAAVAAGNASGQCKK 479
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BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A835Z5N8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.140e-48
Identity = 115/294 (39.12%), Postives = 163/294 (55.44%), Query Frame = 1 
Query:  556 VLFGDGPIGVKLGENPLKATGVCRVYVTEVLKGSQAMRQADLRAGFGVAAVGG-KAAEKLQPQEVAELIRISPRPMEIVFRDPELLAQRLQAEGDKKAKAARRSRRKAAGDAASPETEATNVDARSGSAGGGSDSAAGELRVTQVGK--KPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNPSDVR-TNFYTDDPCDAAAIAAGNASGQCNK 1425
            V F  GP+G++L E     +  C V V  V  GS+A     +  G GV+ VG     +   P EVA+ I+ +P P+ ++F+ P                               P  E T      G+   G+++    +    V +  +   CG  ++ GDLIE RY+AR+A D   E+D+SD+RGTG PYAI LG GDV++GLDLSL+DMC+GE+R++E+PA LAYG KG+ LFG+P    A SA +VFGV+LVSIN   + +  R +N+YT DPC+  A  AG ASG C++
Sbjct:    7 VTFESGPVGIELAE--ALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYP-------------------------------PVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIA-DTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVP----ANSA-LVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDR 261
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A7S0KXW8_9STRA (Peptidylprolyl isomerase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXW8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.970e-30
Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 1 
Query:  970 LRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNPSDVRT 1353
            L + +V     +CG +++ GD++E  Y AR+AS     +DSS++RGTG PY  VLGNGDV+KG+DL LFDMC GE R+++IP+ L YGRKGS LF IP     G   + + VELV +NF    ++ +T
Sbjct:   12 LVIKKVSPPGGICGIKSRRGDVLEINYEARVASPGGPIYDSSEQRGTGQPYQFVLGNGDVIKGVDLGLFDMCPGEVRELDIPSALGYGRKGSILFDIP-----GDVRLWWKVELVRLNFVGEGNNAKT 134
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BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A0M0J722_9EUKA (Peptidylprolyl isomerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J722_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 4.780e-26
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 1 
Query:  985 VGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNPSDVRTNF-----YTDDPCDAAAIAAG 1401
             G +   C  +T+A D++E  +S RLAS   +EFDSS+ R +G P+A  LGNGDV++GLDL   +MC+GE+R + +P+RL +G +GSK+FG+PPD     A + + V LVSIN   +P   R        Y++D       AAG
Sbjct:   72 TGPQDPKCAFKTRASDVVEIEFSGRLASS-GLEFDSSEMR-SGRPFAFTLGNGDVVRGLDLGTLEMCIGEERLLLVPSRLGFGTRGSKVFGVPPD-----APLDYRVRLVSINMITDPKARRAEVDDEQRYSEDESGDIVNAAG 208
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A1Z5KS47_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS47_FISSO)

HSP 1 Score: 110 bits (276), Expect = 1.210e-23
Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 1 
Query:  991 KKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSIN 1323
            +K   C  +++ GD++E +Y AR  S     +DSS+RRGTG PY +VLG+GD+L G+DL L+DMC GE R ++IP  L YG KG+K+F +PPD       + + V+L++IN
Sbjct:  160 QKTTKCSLQSRRGDVLEIKYEARFQSPQGPIYDSSERRGTGRPYQMVLGSGDILAGVDLGLYDMCPGEIRTLQIPPPLGYGPKGNKMFRVPPD-----TTLFWKVQLMTIN 265
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A8J6CFR5_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR5_DIALT)

HSP 1 Score: 113 bits (283), Expect = 4.220e-23
Identity = 82/243 (33.74%), Postives = 123/243 (50.62%), Query Frame = 1 
Query:  625 RVYVTEVLKGSQAMRQADLRAGFGVAAVGGKA-AEKLQPQEVAELIRISPRPMEIVFRDPELLAQRLQAEGDKKAKAARRSRRKAAGDAASPETEATNVDARSGSAGGGSDSAAGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNPSDVR 1350
            RV V+ ++ GS+A R   +RAG  + A+GG+  A  ++ ++V   I  +PRP+ + F      A  L A  D+    A ++RR         ETE                      ++ +  +    C  R++ GD IE  Y  RLA       DSS  RG G P+A+ LGNGDV + L+L ++DMC+GE R+I  P RLAYG  G++  G+PP+     A +VF V + +INF  +P+  R
Sbjct:  355 RVAVSRIVPGSEAERTG-VRAGVFLTAIGGEQLAPTVRAEDVRATIARAPRPVALTF------AGALGA--DEAVGLAAKARR--------AETE--------------------RFKLERTREPAPNCAIRSRKGDTIEIEYETRLADATQRVIDSSFMRGIGAPFALQLGNGDVPRALELGIYDMCIGEARRIVAPPRLAYGLAGNRALGVPPN-----ATIVFDVTMSAINFQTDPATRR 555
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A7S3AIC8_9EUKA (Peptidylprolyl isomerase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AIC8_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 1.870e-22
Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 1 
Query:  988 GKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNP 1338
            G +   C  RT+  D++E  YSA L +D   EFDSS++R +G P+A  LGNGDV++GL+L   +MC+GE+R + +P +LA+G +GSKL  +PPD     A VV+ ++L SIN   +P
Sbjct:  142 GPQDPSCRFRTRESDVVEIEYSASLEAD-GREFDSSEQR-SGRPFAFALGNGDVVRGLELGTLEMCIGEERLVHVPPQLAFGSRGSKLLRVPPD-----APVVYRIKLKSINMQADP 251
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BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A7S2ET29_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ET29_TRICV)

HSP 1 Score: 104 bits (260), Expect = 6.790e-21
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 1 
Query:  991 KKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSIN 1323
            +K   C  +++ GD++E  Y AR+       +DSS  RGTG PY  VLG+GDV+KG+DL ++DMC GE R++ +P+ LAYGR GSKL+ IP         V + VELV +N
Sbjct:  259 RKGGSCEIKSRRGDVLEMNYEARVGGRDGQVYDSSAERGTGQPYMFVLGSGDVIKGVDLGMYDMCPGEVRELSVPSELAYGRLGSKLYRIPS-----GFRVWWKVELVRVN 364
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A7S1V2L7_9STRA (Peptidylprolyl isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V2L7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.870e-20
Identity = 53/124 (42.74%), Postives = 80/124 (64.52%), Query Frame = 1 
Query:  952 DSAAGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSIN 1323
            D++   +   +V K+P     +++ GDL+E  YSA +A     E+DSS  RGTG PY +VLG+GD++ G+DL L+DM  GEKR+++IP  L +G +G K FGIP       + +V+ VELV++N
Sbjct:   61 DTSPAAVYTKRVLKEPPNRILQSRRGDLLEINYSATIAGT-DYEYDSSAIRGTGQPYQMVLGSGDMIPGVDLGLYDMSPGEKRQLDIPQTLGHGPRGRKNFGIPE-----GSSLVWTVELVALN 178
[Close]
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Match: A0A8J9S4D0_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S4D0_PHATR)

HSP 1 Score: 90.5 bits (223), Expect = 1.230e-18
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 1 
Query: 1069 DLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPARLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSIN 1323
            D  V +D+S  RGTG PY +VLG+GD+L G+D  L++MC GE R+I IP +L+YG +G+KLF IPPD     + +++ VELVS+N
Sbjct:    1 DNGVVYDASASRGTGRPYQMVLGSGDMLPGVDQGLYEMCPGEVREIVIPPQLSYGPRGNKLFRIPPD-----STLLWKVELVSVN 80
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST8_ECTSI9.520e-17562.12Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835Z5N8_9STRA1.140e-4839.12Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S0KXW8_9STRA8.970e-3047.66Peptidylprolyl isomerase n=1 Tax=Asterionellopsis ... [more]
A0A0M0J722_9EUKA4.780e-2642.36Peptidylprolyl isomerase n=1 Tax=Chrysochromulina ... [more]
A0A1Z5KS47_FISSO1.210e-2345.95Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A8J6CFR5_DIALT4.220e-2333.74Peptidylprolyl isomerase n=1 Tax=Diacronema luther... [more]
A0A7S3AIC8_9EUKA1.870e-2245.30Peptidylprolyl isomerase n=1 Tax=Haptolina ericina... [more]
A0A7S2ET29_TRICV6.790e-2145.95Peptidylprolyl isomerase n=1 Tax=Trieres chinensis... [more]
A0A7S1V2L7_9STRA2.870e-2042.74Peptidylprolyl isomerase n=1 Tax=Grammatophora oce... [more]
A0A8J9S4D0_PHATR1.230e-1851.76Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3538021..3543530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score516.2
Seed ortholog evalue1.7e-143
Seed eggNOG ortholog2880.D8LST8
KEGG koko:K09569
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048856,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0545@1,KOG0549@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSecreted FKBP domain protein
Ec32 orthologEc-15_002640.1
Exons8
Model size1547
Cds size1410
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1612.1prot_P-fluviatile_contig12.1612.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 3538140..3543512 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.1846638-UTR-P-fluviatile_contig12:3538020..35381391622815534.1846638-UTR-P-fluviatile_contig12:3538020..3538139Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3538021..3538139 -
1693562167.1029599-UTR-P-fluviatile_contig12:3538020..35381391693562167.1029599-UTR-P-fluviatile_contig12:3538020..3538139Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3538021..3538139 -
1622815534.3155982-UTR-P-fluviatile_contig12:3543512..35435301622815534.3155982-UTR-P-fluviatile_contig12:3543512..3543530Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3543513..3543530 -
1693562167.2015831-UTR-P-fluviatile_contig12:3543512..35435301693562167.2015831-UTR-P-fluviatile_contig12:3543512..3543530Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3543513..3543530 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.1976357-CDS-P-fluviatile_contig12:3538139..35382891622815534.1976357-CDS-P-fluviatile_contig12:3538139..3538289Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3538140..3538289 -
1693562167.1191514-CDS-P-fluviatile_contig12:3538139..35382891693562167.1191514-CDS-P-fluviatile_contig12:3538139..3538289Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3538140..3538289 -
1622815534.2137113-CDS-P-fluviatile_contig12:3538753..35388851622815534.2137113-CDS-P-fluviatile_contig12:3538753..3538885Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3538754..3538885 -
1693562167.1298993-CDS-P-fluviatile_contig12:3538753..35388851693562167.1298993-CDS-P-fluviatile_contig12:3538753..3538885Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3538754..3538885 -
1622815534.2273345-CDS-P-fluviatile_contig12:3539458..35395581622815534.2273345-CDS-P-fluviatile_contig12:3539458..3539558Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3539459..3539558 -
1693562167.1378548-CDS-P-fluviatile_contig12:3539458..35395581693562167.1378548-CDS-P-fluviatile_contig12:3539458..3539558Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3539459..3539558 -
1622815534.2424014-CDS-P-fluviatile_contig12:3540025..35402401622815534.2424014-CDS-P-fluviatile_contig12:3540025..3540240Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3540026..3540240 -
1693562167.145849-CDS-P-fluviatile_contig12:3540025..35402401693562167.145849-CDS-P-fluviatile_contig12:3540025..3540240Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3540026..3540240 -
1622815534.2583983-CDS-P-fluviatile_contig12:3540743..35407801622815534.2583983-CDS-P-fluviatile_contig12:3540743..3540780Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3540744..3540780 -
1693562167.160374-CDS-P-fluviatile_contig12:3540743..35407801693562167.160374-CDS-P-fluviatile_contig12:3540743..3540780Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3540744..3540780 -
1622815534.270741-CDS-P-fluviatile_contig12:3541146..35412981622815534.270741-CDS-P-fluviatile_contig12:3541146..3541298Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3541147..3541298 -
1693562167.1747444-CDS-P-fluviatile_contig12:3541146..35412981693562167.1747444-CDS-P-fluviatile_contig12:3541146..3541298Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3541147..3541298 -
1622815534.2836127-CDS-P-fluviatile_contig12:3542086..35421791622815534.2836127-CDS-P-fluviatile_contig12:3542086..3542179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3542087..3542179 -
1693562167.183182-CDS-P-fluviatile_contig12:3542086..35421791693562167.183182-CDS-P-fluviatile_contig12:3542086..3542179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3542087..3542179 -
1622815534.2999203-CDS-P-fluviatile_contig12:3542981..35435121622815534.2999203-CDS-P-fluviatile_contig12:3542981..3543512Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3542982..3543512 -
1693562167.1918042-CDS-P-fluviatile_contig12:3542981..35435121693562167.1918042-CDS-P-fluviatile_contig12:3542981..3543512Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3542982..3543512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1612.1

>prot_P-fluviatile_contig12.1612.1 ID=prot_P-fluviatile_contig12.1612.1|Name=mRNA_P-fluviatile_contig12.1612.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=470bp
MIYQLLGVWFSGAPWHPTAAFQHHIPLLQQRSETTLVKHGARRQLRRLAL
CATSPAHDNRSCHPMPPDSSSSGSTVPKWLNLPPSRSAVNPGRSSALGVT
ESRNRRCGPISLTRSDLLDGLAAAVLGAAATAVTPRCALAATAEGENVVG
ETKIDSMPAPGGVVEGGEGKYKVASDEVGVLFGDGPIGVKLGENPLKATG
VCRVYVTEVLKGSQAMRQADLRAGFGVAAVGGKAAEKLQPQEVAELIRIS
PRPMEIVFRDPELLAQRLQAEGDKKAKAARRSRRKAAGDAASPETEATNV
DARSGSAGGGSDSAAGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLAS
DLSVEFDSSDRRGTGLPYAIVLGNGDVLKGLDLSLFDMCVGEKRKIEIPA
RLAYGRKGSKLFGIPPDDGAGSADVVFGVELVSINFSVNPSDVRTNFYTD
DPCDAAAIAAGNASGQCNK*
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mRNA from alignment at P-fluviatile_contig12:3538021..3543530-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1612.1 ID=mRNA_P-fluviatile_contig12.1612.1|Name=mRNA_P-fluviatile_contig12.1612.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5510bp|location=Sequence derived from alignment at P-fluviatile_contig12:3538021..3543530- (Porterinema fluviatile SAG_2381)
CGGCCGCCGGCCGCCGCGATGATATACCAGCTCCTCGGTGTTTGGTTTTC
TGGCGCACCATGGCACCCTACCGCAGCCTTCCAGCATCATATTCCGTTAC
TGCAGCAGCGCAGCGAAACAACTCTTGTGAAACATGGCGCGCGAAGACAG
CTTCGTAGACTGGCGCTGTGTGCAACCAGCCCTGCACACGACAACCGAAG
TTGCCACCCAATGCCGCCGGACAGCAGCAGCAGCGGCAGCACTGTACCCA
AATGGCTCAACCTGCCACCAAGCCGATCAGCGGTCAACCCCGGCCGAAGC
AGCGCGCTCGGCGTCACGGAGAGCCGGAACAGAAGATGCGGCCCAATTTC
GTTGACCCGATCCGATCTTCTTGACGGCCTGGCGGCGGCGGTGCTAGGAG
CGGCGGCTACTGCGGTAACACCACGGTGTGCATTAGCAGCGACGGCGGAA
GGCGAAAACGTAGTAGGGGAAACGAAAATTGATTCCATGCCGGCGCCCGG
TGGGGTCGTGGAGGGCGGGGAAGGGAAGTACAAGGTGGCGTCTGACGAGG
TGTGTGCGGATCGAAAAAGGCCTATCGAAAACATGCGCAAACACGGCACA
TTTGACCTTCGTGCGGTTCAAAGTTGCGTCGGGTACATGGGCGCATTGTT
CGTTCGACCTCGTCGGAGACCGCACACAATATCTGGCCTTTGGCCTGTGA
GGCTTTCCCATTGACGTAGAAACGCACAACAAAGCCCGTTGATGCACACA
AAAAGTTGACATCAAAGTTTCAAGGTACACTTGGTGAGAGGAGGCCGCCC
TCCCAAACTCAGATATGCGCGAAGTCCCGGAACATCCCTACGTTTGCAGC
GTCCGAAGAGCATATCGTACCGCTCAGTAGGATGTGTAAAAGATTGCAGT
CCTTCGACAGCAAGTAACCTGGGAGAAAAGGCCTCGAATACGCTACGCAC
TCAGATGAAGCTTCATTAGTAGGAAGACGATCGGCTTGGAGTGCTGGACT
CTGATGTGTCCCGTAAATGAAAGCCCGCTGCTGTAGATTAGTCAAGCCAC
TGGTAGTCTGTTCGATGCAATTATGTGTTGGTACGATACCAACTCTTGTT
GTTTACGAACGCGAGATCGTCTTGTCCTTTATTATCCTCCGGCGGACATG
AAAATATTACAATCTCGCGATCACACGTGGTCGAAAGGTATGATCATTAG
AAGCAAATATACTCGAACAGCCGCTTCACAAGCCGTTTTTCCAACGACTA
CACTAGGATAGAAGGTCTGTGTTGGTGATTTTCATGTGAATAGTTTTTTT
CTTCCCGTTACGTGGCATGATGATCGTAAAAATGTGCGGCGCTGGTGACA
GGTGGGCGTGCTGTTCGGCGACGGGCCCATCGGCGTCAAGCTCGGGGAAA
ATCCGCTCAAGGCTACTGGGGTGTGCAGGGTCTACGTTACAGAGGTGAAA
GAGAGTTCTGGGAGAGGATTTGTACATCCACCAGGATGCATAGGTTCTAC
ACAACGGAGATGTACGAGTGTTTGGCAAGAGAGAGGGGTTGTTCATCAAC
CGGAGTGTGCGGGGTTTGTGTTACAGAGAAAACAATATTTCAGGGAGAGG
AGTCGTAAATCCACTGGTGTGTGCAGGGTCTACGTGACAAGGGTGAAGAG
AGTTCGGGCAGAGAAGTTGCACACCGCTCATGGCGGAAGCACTGTAGTTT
ACATCGCAAAAGTGTTATTTCTTTGTGGTTTTTTGTTTCGACGAACCCGT
ACCCCGTTGCGACATTCGCTCCTCTCATTTCGTCAAAGGTTGCCTATGAT
GGGATGCTAGTGAAATCACAGTCCAAACGCGAGTTGAACCAAACTTCACT
GCATCGTCCGGTGTGTTAGCGATCGTTTGAATGACAACTGGCGGGACCCC
CCGAATCTGTTCGTACTTGCATGCTTTTTTTGTTCCAAAAGAAGGTAGAT
CGTGCGAAACATGATCGGGTATCAAGGCTGAAAGTGCGCCTGCGGGACGC
ATAAATTTCTTTTTCTGCTATCGATCATGGGTGGCAAAGTACGCGAACGG
CTCGGTTTGTTTCCCCTCTGAAAGTGCCCAAGAACCGATCGTGCAGCATT
GATCCGGTCAGCGGACTCCATCCACAACTCAGAGCAATTGCCGGATTACT
CCCATGCTATTCGGATCCCATGCTTTAAATTGTGTTCGGACTGAACGGTG
ATCCTTACTGCCGCGGCAAAAACATGAAAAAGGTGCTGAAGGGGTCTCAG
GCGATGCGCCAGGCGGACCTCCGGGCCGGGTTCGGTGTTGCGGCCGTGGG
TGGCAAGGCGGCCGAAAAGCTCCAGCCGCAGGAAGTGGCAGAGCTGATAA
GGATATCGCCGCGGCCGATGGAGATCGTTTTCAGGTGTTTGCGGCTTTGT
GCTAGATGCCTTGTCTTGACTTACTGTCGTTGCTGCTGCTGCTGCTTATA
CTGCTGCTTTCGGTGTTGTCGTTGTTGCGGCTTGTTCCCTTGGCACCACC
GATATCACTGACGACCGAATGCAATGACCTGCGTTCATGGTTTAGAGCCG
ATCCATTTGGCGTCGTGTAGGATTGACCGCCGGCCTGGGATTCTCCGTAT
CGACAAGATAGAAAAGCGTCGTATACTTTGTGGCCGCCCCTCCTCTGATC
CATACAGGGAACGCCATATCTCAGCGAGGCATAGTACCGACAGAACGCTT
CCTCATTATCCCACTCTACTACGTTTGCTCGGGTATCGTTTCATCGGCAG
GGACCCCGAGCTCCTTGCGCAAAGGCTACAAGCCGAGGTAGGCCGAATTT
TCTTTGCCGTCCCATCGCGTCTTCAACCGAAGGCTTTATCGAGTGCTACT
TCTCGACTTTTATTGTGTTGCATGTGCCTTAGTCGCGCGGCTTCCCCTTC
CTTGTGTGCGGAAAATGCTGCGCGACTCCGGCGTGAACAGCAGGGTTAAT
GGCGGGAAAGAGAACACCAGCGAACGGGACACCAGACCGCTTTTGGTAGC
TGCAGCCGCCGCCATACTTCAAACCATTTTCCAAAGGCGACCCCTGTGTC
GCGAGCCCGACGTCTCCAAAGGGCTGCTTGCTTCACGGCGGAATGGAAAA
GGCAAACAGCAAATGAGCGCTCTATCCGCCCGCTTCGATGTACAGCACAA
TACAGCTGCCCCGCACCTTCCCACTTGTTGTCCGTGTACGCCACGCACGT
GGGTGCATCGTAAAATATAAAATGCCAGTTGCTGAACCTTCTTCATCATC
CTCCCCCGCCCGCCCCCCGTTGTTTTTTCTTTTGCGGCAGGGCGACAAAA
AAGCGAAGGCCGCGAGACGCAGTAGGCGGAAGGCTGCGGGCGACGCGGCA
TCGCCGGAGACGGAAGCGACCAACGTCGACGCCCGCAGCGGTAGCGCCGG
CGGCGGCAGTGATTCGGCGGCGGGGGAGCTGAGGGTAACGCAAGTGGGCA
AGAAGCCGGCGGTCTGCGGCACGAGGACCAAGGCTGGCGATCTGATCGAG
TTCAGGTGTGTTTTGCGAGCGTTGCGGTGCGGAAAGCCGCGGTGCGGAAG
TCTAGTTGCGTTAAGGTGCGGGACGATGGTGTGTGTTGCGGTACAGTACG
GTACTTGATCATCACATCGTGGCGAAAGCAGCATGTCATGTACCAGTATG
ACGTTGGAACATTGGGAAAGATGTGCTGGAGATCGAGTAATTTTGTCGCT
GTCGGAGATCCATCGGATGAGCGCATATATAGTGCGATGTATTTAGGCCC
GGCCAGAGAGCGACCAAGAGGCCAATCGCACCGCTCTCAAAGGCACTGCA
CTCTCTGCTGTGGAATCGCGGACGTAGCGCTGCCCAGGGCATCTTGTCTC
TCGTAGAGTTGGTGTTGCTACTGCTTCTGCCGCCGCTGCCGCTGTAGGTG
ACGCTGTTGTCGGTGTCGATGATGCTGTCGTTCCTGCTGCTGTCGCTGGT
TTGTGATGTTGCTCGTCCTAAGGTACTCGGCGCGCTTAGCGAGCGACCTC
TCGGTGGAGTTCGACTCAAGCGACAGAAGGGGAACGGGACTGCCATACGC
GATCGTCCTCGGGAACGGCGATGTGAGGAAAAGAGATCCGGGCAAGCACC
GACGATTGGCCTTTAGATTGTTCCTGCGGCTGCTGCTCCTCCTGCGGCTG
CTTCTGCTACTACATTTTTCGCGTCTGTTTCAATTGAGAACCTCGGGACT
GCTTCTAGCGTCAATGATGGTGATGTTGGTGCGCCGCTAGTTGTTTATGC
GCTTTGCGTTGCCTGGGGTCCAAAAAGTACGCAATCGCAACTCAGCTTAA
CAAAAAATTGGATTTGTGCGCTGGCTTGCCGCTGCAAGTTGGTGCTCAGA
AGAGTACGGCTTTCGCGCCGATGTGGGATCTGACAAACGTGCACTGCTTT
CGCACTCGAACCACGAAAAAATGTCGAACGCATGGCTTTTCATCCGCTTC
GGCTGCTGCTTCCGCCCTCGGCATTGGTTATGGTTCCTGCCTTCCCGCCG
TCGCTGCTCGTTTGCCACCATAACTTGACTTGTTCACCCTTTCCCGCATA
CGCACTGTTAGTGTCGCTATTGCCGCTGTTTGTTCCCGTCTTGATGCACT
TTGCTTCTTGTGCCGTCAACGCGTGCTTCCTCGTCCCCTCGTCAGGTTTT
GAAGGGCCTGGATCTGTCGCTGTTCGACATGTGCGTCGGAGAAAAGAGGA
AAATAGAGATACCCGCCCGCCTGGCGTACGGGCGGAAAGGGAGCAAGCTG
TTCGGAATACCTCCGGATGACGGAGCGGTGAGGGCGTGTGCAGACATGGG
CAGACATGGCTCGGAGGGACAAAGTGAACAGATGTTGTTTGCGATCACTT
TCTGTTTGTGAGATTGATCGGGCGGACGGCGCAGGGGCACTGATCCGTTG
CTACCTTAACACCTGCCGTTTTGACCACTTCCACGGAGCGGGGGTCCCGA
CTGGGGCAATGTTGCCAAGACTCTGAGGAACCGTGCGGATCCCTTACAGC
TGCTGTGTTCGTGGCAGGACCGATTGTTTTGGATCCTTTTGCCCAATGAT
GCGTCATTGCGGTTCGCTCTCGTTCCCGCAATACGAGCTTTCCCTCCGTG
TACCTCTGCATGTCGCTCAAGCTTGTCGCTCGTATCATTCTTGTTCTAGC
GCCAAACAACGAACGCCGTTTGTTTCCCCGTGCGCTCTGCCCCACAATAC
CAACACTGAAATACACCCGACGTAAAATCGGGGCGAGACAGGGGTCCGCG
GACGTGGTGTTCGGAGTCGAGCTTGTGAGTATCAACTTCTCCGTCAACCC
TTCCGACGTGCGGACTAACTTCTACACGGACGACCCCTGCGACGCGGCAG
CCATTGCCGCTGGGAACGCCAGCGGGCAGTGCAACAAATGATGAGCACGG
CGGGAAAATGTGACTTGAGCACATGGGGCACCGGGGGGGGGGCAGGTGTA
CTCAGAGTCATTCATGCCGTAGTCACAGGAACTCGCGTCCTTACCAAGTC
GGGTTTGGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:3538021..3543530-

>mRNA_P-fluviatile_contig12.1612.1 ID=mRNA_P-fluviatile_contig12.1612.1|Name=mRNA_P-fluviatile_contig12.1612.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2820bp|location=Sequence derived from alignment at P-fluviatile_contig12:3538021..3543530- (Porterinema fluviatile SAG_2381)
ATGATATACCAGCTCCTCGGTGTTTGGTTTTCTGGCGCACCATGGCACCC
TACCGCAGCCTTCCAGCATCATATTCCGTTACTGCAGCAGCGCAGCGAAA
CAACTCTTGTGAAACATGGCGCGCGAAGACAGCTTCGTAGACTGGCGCTG
TGTGCAACCAGCCCTGCACACGACAACCGAAGTTGCCACCCAATGCCGCC
GGACAGCAGCAGCAGCGGCAGCACTGTACCCAAATGGCTCAACCTGCCAC
CAAGCCGATCAGCGGTCAACCCCGGCCGAAGCAGCGCGCTCGGCGTCACG
GAGAGCCGGAACAGAAGATGCGGCCCAATTTCGTTGACCCGATCCGATCT
TCTTGACGGCCTGGCGGCGGCGGTGCTAGGAGCGGCGGCTACTGCGGTAA
CACCACGGTGTGCATTAGCAGCGACGGCGGAAGGCGAAAACGTAGTAGGG
GAAACGAAAATTGATTCCATGCCGGCGCCCGGTGGGGTCGTGGAGGGCGG
GGAAGGGAAGTACAAGGTGGCGTCTGACGAGATGATATACCAGCTCCTCG
GTGTTTGGTTTTCTGGCGCACCATGGCACCCTACCGCAGCCTTCCAGCAT
CATATTCCGTTACTGCAGCAGCGCAGCGAAACAACTCTTGTGAAACATGG
CGCGCGAAGACAGCTTCGTAGACTGGCGCTGTGTGCAACCAGCCCTGCAC
ACGACAACCGAAGTTGCCACCCAATGCCGCCGGACAGCAGCAGCAGCGGC
AGCACTGTACCCAAATGGCTCAACCTGCCACCAAGCCGATCAGCGGTCAA
CCCCGGCCGAAGCAGCGCGCTCGGCGTCACGGAGAGCCGGAACAGAAGAT
GCGGCCCAATTTCGTTGACCCGATCCGATCTTCTTGACGGCCTGGCGGCG
GCGGTGCTAGGAGCGGCGGCTACTGCGGTAACACCACGGTGTGCATTAGC
AGCGACGGCGGAAGGCGAAAACGTAGTAGGGGAAACGAAAATTGATTCCA
TGCCGGCGCCCGGTGGGGTCGTGGAGGGCGGGGAAGGGAAGTACAAGGTG
GCGTCTGACGAGGTGGGCGTGCTGTTCGGCGACGGGCCCATCGGCGTCAA
GCTCGGGGAAAATCCGCTCAAGGCTACTGGGGTGTGCAGGGTCTACGTTA
CAGAGGTGGGCGTGCTGTTCGGCGACGGGCCCATCGGCGTCAAGCTCGGG
GAAAATCCGCTCAAGGCTACTGGGGTGTGCAGGGTCTACGTTACAGAGGT
GCTGAAGGGGTCTCAGGCGATGCGCCAGGCGGACCTCCGGGCCGGGTTCG
GTGTTGCGGCCGTGGGTGGCAAGGCGGCCGAAAAGCTCCAGCCGCAGGAA
GTGGCAGAGCTGATAAGGATATCGCCGCGGCCGATGGAGATCGTTTTCAG
GTGCTGAAGGGGTCTCAGGCGATGCGCCAGGCGGACCTCCGGGCCGGGTT
CGGTGTTGCGGCCGTGGGTGGCAAGGCGGCCGAAAAGCTCCAGCCGCAGG
AAGTGGCAGAGCTGATAAGGATATCGCCGCGGCCGATGGAGATCGTTTTC
AGGGACCCCGAGCTCCTTGCGCAAAGGCTACAAGCCGAGGGACCCCGAGC
TCCTTGCGCAAAGGCTACAAGCCGAGGGCGACAAAAAAGCGAAGGCCGCG
AGACGCAGTAGGCGGAAGGCTGCGGGCGACGCGGCATCGCCGGAGACGGA
AGCGACCAACGTCGACGCCCGCAGCGGTAGCGCCGGCGGCGGCAGTGATT
CGGCGGCGGGGGAGCTGAGGGTAACGCAAGTGGGCAAGAAGCCGGCGGTC
TGCGGCACGAGGACCAAGGCTGGCGATCTGATCGAGTTCAGGGCGACAAA
AAAGCGAAGGCCGCGAGACGCAGTAGGCGGAAGGCTGCGGGCGACGCGGC
ATCGCCGGAGACGGAAGCGACCAACGTCGACGCCCGCAGCGGTAGCGCCG
GCGGCGGCAGTGATTCGGCGGCGGGGGAGCTGAGGGTAACGCAAGTGGGC
AAGAAGCCGGCGGTCTGCGGCACGAGGACCAAGGCTGGCGATCTGATCGA
GTTCAGGTACTCGGCGCGCTTAGCGAGCGACCTCTCGGTGGAGTTCGACT
CAAGCGACAGAAGGGGAACGGGACTGCCATACGCGATCGTCCTCGGGAAC
GGCGATGTACTCGGCGCGCTTAGCGAGCGACCTCTCGGTGGAGTTCGACT
CAAGCGACAGAAGGGGAACGGGACTGCCATACGCGATCGTCCTCGGGAAC
GGCGATGTTTTGAAGGGCCTGGATCTGTCGCTGTTCGACATGTGCGTCGG
AGAAAAGAGGAAAATAGAGATACCCGCCCGCCTGGCGTACGGGCGGAAAG
GGAGCAAGCTGTTCGGAATACCTCCGGATGACGGAGCGGTTTTGAAGGGC
CTGGATCTGTCGCTGTTCGACATGTGCGTCGGAGAAAAGAGGAAAATAGA
GATACCCGCCCGCCTGGCGTACGGGCGGAAAGGGAGCAAGCTGTTCGGAA
TACCTCCGGATGACGGAGCGGGGTCCGCGGACGTGGTGTTCGGAGTCGAG
CTTGTGAGTATCAACTTCTCCGTCAACCCTTCCGACGTGCGGACTAACTT
CTACACGGACGACCCCTGCGACGCGGCAGCCATTGCCGCTGGGAACGCCA
GCGGGCAGTGCAACAAATGAGGGTCCGCGGACGTGGTGTTCGGAGTCGAG
CTTGTGAGTATCAACTTCTCCGTCAACCCTTCCGACGTGCGGACTAACTT
CTACACGGACGACCCCTGCGACGCGGCAGCCATTGCCGCTGGGAACGCCA
GCGGGCAGTGCAACAAATGA
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