mRNA_P-fluviatile_contig12.1610.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1610.1
Unique NamemRNA_P-fluviatile_contig12.1610.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: D8LST5_ECTSI (DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST5_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 1.790e-60
Identity = 114/161 (70.81%), Postives = 126/161 (78.26%), Query Frame = 1 
Query:    1 MKCSFLLALALRAQVGHAFVGPAGGLALSNCFSAAAGATTGILRRGVASTPSRAKASTDDGDGPVVLRKPALVEAMAERGDMSKVQAEAALAAFTDVIKSNVADGKKISLQGFGTFEGRSRKGRTGRNPSTGAELTIKPTTVPVFTAAKAFKDMVKAAHTD 483
            MKCS LLALA RAQ G  FVGP GGL LSNC S AA +   I+RRGVAST  +A AS +  D  V LRKPA+VEA+AER ++ K QAEAALAAFTDV+   VADG KISLQGFGTFEGR+RKGRTGRNP TG EL IK TT P F+A+KAFKDMVKAAHTD
Sbjct:    1 MKCSLLLALAFRAQSGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASDEGSDASVNLRKPAVVEAIAERSNLDKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMVKAAHTD 161
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 6.690e-36
Identity = 89/166 (53.61%), Postives = 108/166 (65.06%), Query Frame = -1 
Query: 1644 FCAVP------CRLGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIIS-FSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI 2120
            +CA P        LGILG+   RTS MGIT ERG  TG++MQ F D+DYAS    RRS  V     + G   ++ FSR Q      +  ST+E+EYVA+ DV+    F+RQVW FMLP+AG P +PVFED++ AIQIAHNP  NSNSKHIDV  HF+RELV RK I
Sbjct:  128 YCASPKMVHWKAALGILGYVR-RTSWMGITFERGVVTGMSMQVFVDADYASKATDRRS--VSGGLVMCGGGCVTWFSRTQKC----VTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEI 286
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 7.890e-35
Identity = 89/166 (53.61%), Postives = 108/166 (65.06%), Query Frame = -1 
Query: 1644 FCAVP------CRLGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIIS-FSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI 2120
            +CA P        LGILG+   RTS MGIT ERG  TG++MQ F D+DYAS    RRS  V     + G   ++ FSR Q      +  ST+E+EYVA+ DV+    F+RQVW FMLP+AG P +PVFED++ AIQIAHNP  NSNSKHIDV  HF+RELV RK I
Sbjct:  245 YCASPKMVHWKAALGILGYVR-RTSWMGITFERGVVTGMSMQVFVDADYASKATDRRS--VSGGLVMCGGGCVTWFSRTQKC----VTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEI 403
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.480e-34
Identity = 82/171 (47.95%), Postives = 107/171 (62.57%), Query Frame = -1 
Query: 1635 FCAVP------CRLGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDV---RGTAIISFSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI*II 2120
            +CA P        + ILG+   RTSH GI+ +RGT  G ++Q + D+D+AS    RRS     +  +    G A+  FSR Q      +  ST+E+EYVALG+VV    F+RQ+W FMLP+ G P +PVFED++ AIQ+A NP  NSNSKHIDV  HFLRELV RK I +I
Sbjct:   23 YCASPKLVHWNAAMDILGYAR-RTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSV----SGGIVTCGGGAVSWFSRTQKC----VTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 184
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5JI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI51_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 2.040e-34
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = -1 
Query: 1635 ILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDV---RGTAIISFSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI*II 2093
            ILG+   RTSH GI+ +RGT  G ++Q + D+D+AS    RRS     +  +    G A+  FSR Q      +  ST+E+EYVALGDVV    F+RQ+W FMLP+ G P +PVFED++ AIQ+A NP  NSNSKHIDV  HFLRELV RK   +I
Sbjct:    3 ILGYAR-RTSHFGISFQRGTVEGFSLQVYADADFASKAADRRSV----SGGIVTCGGGAVSWFSRTQKC----VTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQVAQNPISNSNSKHIDVRHHFLRELVERKESSVI 149
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.850e-34
Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = -1 
Query: 1635 FCAVPCR------LGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIIS-FSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI*II 2120
            +CA P R      +GILG+   RTS+MGI+ +RGT  G ++Q + D+D+AS    RRS  V       G  ++S FSR Q      +  ST+E+ YVALGDVV    F+RQVW FMLP+ G P +PVFED++ AIQ+A NP  NSNSKHIDV  HFLRELV RK I +I
Sbjct:  158 YCASPKRVHWDAAMGILGYA-KRTSYMGISFQRGTVEGFSLQGYADADFASKAADRRS--VSGGIVTCGGGVVSWFSRTQKC----VTLSTTEAGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 319
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5L114_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L114_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 4.580e-34
Identity = 106/279 (37.99%), Postives = 144/279 (51.61%), Query Frame = -1 
Query: 1635 LRARRASTSVITILSGLLCGIPTEL-----------------VYMRQPKGCGRISGKILHLVKSHHDLKQRGRGNEKHALLVNGAIVGGFG--------------------FCAVP------CRLGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIISFSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI*II 2342
            L A   S S + +L+ L C +  +L                 VYMR P+GCG +SG I+ L KS   + Q+   +E   L     + GG                      +CA P        +GILG+   RTS+MG++++RGT  G ++Q + D+D+ S    RRS   R      G  +  FSR Q   + +   ST+E+EYVALGDVV    F+RQVW FMLP+   P +PVFED++ AIQ+A NP  NSNS+H D   HFLRELV RK I +I
Sbjct:  758 LYAPTVSVSCVRMLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLLTISQQTFTDE---LAAEYGVPGGSSMWLATQTRPDIANAVRAVARYCASPKQVHWDAAMGILGYA-KRTSYMGVSVQRGTIEGFSLQGYADADFGSKAADRRSVSGR-IVKCGGGVVSWFSRTQKKCVTL---STTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSEHTDARHHFLRELVERKEISVI 1028
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5KD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD11_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 4.980e-34
Identity = 89/165 (53.94%), Postives = 106/165 (64.24%), Query Frame = -1 
Query: 1644 FCAVP------CRLGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIISFSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI 2120
            +CA P        LGILG+   RTS MGIT ERG  TG++MQ F D+DYAS    RRS          G  +  FSRMQ      +  ST+E+EYVA+ DV+    F+RQVW FMLP+AG P +PVFED++ AIQIAHNP  NSNSKHIDV  HF+RELV RK I
Sbjct:  271 YCASPKMVHWKAALGILGYVR-RTSWMGITFERGVVTGMSMQVFSDADYASKATDRRSVPGGLMM-CGGECVTWFSRMQRC----VTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEI 429
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BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 6.590e-34
Identity = 87/166 (52.41%), Postives = 106/166 (63.86%), Query Frame = -1 
Query: 1644 FCAVP------CRLGILGHTTSRTSHMGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIIS-FSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI 2120
            +CA P        LGILG+   RTS MGIT ERG  TG++MQ F D+DYAS    RRS  V     + G   ++ FSR Q      +  ST+E+EYVA+ DV+    F+RQVW FMLP+A  P +PVFED++ AIQI HNP  NSNSKHIDV  HF+RELV RK I
Sbjct:  183 YCASPKMVHWKAALGILGYVR-RTSWMGITFERGVVTGMSMQVFVDADYASKATDRRS--VSGGLVMCGGGCVTWFSRTQKC----VTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEI 341
[Close]
BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.540e-33
Identity = 77/140 (55.00%), Postives = 93/140 (66.43%), Query Frame = -1 
Query: 1644 MGITLERGTATGITMQRFGDSDYASIILGRRSARVRRNSDVRGTAIIS-FSRMQSALLPMIIWSTSESEYVALGDVVN*AQFIRQVWTFMLPEAGDPSVPVFEDSRVAIQIAHNPF*NSNSKHIDVLRHFLRELVARKRI 2060
            MGIT ERG  TG++MQ F D+DYAS    RRS  V     + G   ++ FSR Q      +  ST+E+EYVA+ DV+    F+RQVW FMLP+AG P +PVFED+   IQIAHNP  NSNSKHIDV  HF+RELV RK I
Sbjct:    1 MGITFERGVVTGMSMQVFVDADYASKAADRRS--VSGGLVMCGGGCVTWFSRTQKC----VTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEI 134
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST5_ECTSI1.790e-6070.81DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KP70_9PHAE6.690e-3653.61Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE7.890e-3553.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KEZ8_9PHAE1.480e-3447.95Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI51_9PHAE2.040e-3450.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF9_9PHAE2.850e-3450.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L114_9PHAE4.580e-3437.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD11_9PHAE4.980e-3453.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE6.590e-3452.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTT9_9PHAE1.540e-3355.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3510916..3517069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score93.2
Seed ortholog evalue1.2e-16
Seed eggNOG ortholog585394.RHOM_02335
Preferred namehup
KEGG koko:K03530
EggNOG free text desc.Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
EggNOG OGs1V9XQ@1239,24MM0@186801,COG0776@1,COG0776@2
COG Functional cat.L
Best tax levelClostridia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03032,ko03036,ko03400
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionHistone-like bacterial DNA-binding protein
Ec32 orthologEc-15_002670.1
Exons4
Model size2615
Cds size486
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1610.1prot_P-fluviatile_contig12.1610.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 3510916..3514940 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.0166736-CDS-P-fluviatile_contig12:3510915..35111011622815534.0166736-CDS-P-fluviatile_contig12:3510915..3511101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3510916..3511101 +
1693562167.0080404-CDS-P-fluviatile_contig12:3510915..35111011693562167.0080404-CDS-P-fluviatile_contig12:3510915..3511101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3510916..3511101 +
1622815534.0286503-CDS-P-fluviatile_contig12:3511915..35120391622815534.0286503-CDS-P-fluviatile_contig12:3511915..3512039Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3511916..3512039 +
1693562167.024426-CDS-P-fluviatile_contig12:3511915..35120391693562167.024426-CDS-P-fluviatile_contig12:3511915..3512039Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3511916..3512039 +
1622815534.039133-CDS-P-fluviatile_contig12:3514310..35144621622815534.039133-CDS-P-fluviatile_contig12:3514310..3514462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3514311..3514462 +
1693562167.0333753-CDS-P-fluviatile_contig12:3514310..35144621693562167.0333753-CDS-P-fluviatile_contig12:3514310..3514462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3514311..3514462 +
1622815534.0528457-CDS-P-fluviatile_contig12:3514916..35149401622815534.0528457-CDS-P-fluviatile_contig12:3514916..3514940Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3514917..3514940 +
1693562167.0424144-CDS-P-fluviatile_contig12:3514916..35149401693562167.0424144-CDS-P-fluviatile_contig12:3514916..3514940Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3514917..3514940 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.0639544-UTR-P-fluviatile_contig12:3514940..35170691622815534.0639544-UTR-P-fluviatile_contig12:3514940..3517069Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3514941..3517069 +
1693562167.054394-UTR-P-fluviatile_contig12:3514940..35170691693562167.054394-UTR-P-fluviatile_contig12:3514940..3517069Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3514941..3517069 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1610.1

>prot_P-fluviatile_contig12.1610.1 ID=prot_P-fluviatile_contig12.1610.1|Name=mRNA_P-fluviatile_contig12.1610.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=162bp
MKCSFLLALALRAQVGHAFVGPAGGLALSNCFSAAAGATTGILRRGVAST
PSRAKASTDDGDGPVVLRKPALVEAMAERGDMSKVQAEAALAAFTDVIKS
NVADGKKISLQGFGTFEGRSRKGRTGRNPSTGAELTIKPTTVPVFTAAKA
FKDMVKAAHTD*
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mRNA from alignment at P-fluviatile_contig12:3510916..3517069+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1610.1 ID=mRNA_P-fluviatile_contig12.1610.1|Name=mRNA_P-fluviatile_contig12.1610.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6154bp|location=Sequence derived from alignment at P-fluviatile_contig12:3510916..3517069+ (Porterinema fluviatile SAG_2381)
ATGAAGTGCTCGTTTCTCCTTGCTCTGGCACTCCGAGCCCAGGTTGGCCA
CGCCTTTGTCGGGCCGGCGGGAGGGTTGGCCCTTTCAAACTGCTTCTCGG
CCGCTGCTGGAGCGACAACCGGCATCCTGCGGAGGGGAGTGGCTTCGACA
CCGTCGAGGGCCAAGGCATCAACCGACGATGGAGACGTGAGTGGTTCTTG
TGGGTGTCAATTGCATCCAGTTTGACAGATGTTTGCAGCAGTGGCAGTGG
TTGAGAGGAAAGCGCAACCGACCCATCAACGGCGGTCTGAAAACTGCTTC
CAACAACCAGGTCCAGCAAATCGCGCACGCCTTGAAAAACAGATAACACG
AGTCGTTGAACGCACCCCACCCAAATGCGTCGACGGTGGTGTGAATGGTT
CTCAGCAACGTAGTTTCGAGCGAGATAGAGTTCCATCAAAGGTCGCTAAT
TGCACTACTCCGGAGTATATTCCAACAGGTCACCCACGAGCGGCTGCCGA
TTACACCAAGTGACCACATGCAAGAGAGATACGGCGATGTTCTGCGAAGG
AACCGTTCAGTTCTCGCGAGGGAGAGAGTCCCGGTGCCCAGCCCGGCGTC
GATGCATAATTTTCTCTTCCCCGTTGTCTCTCATTTTGTCAAAAACTTGT
CCCGAAATAAGTGTGCAGTAGAGCCGTATTGTCGCGCGCGACAGAGAGCA
AGCGTTCCTCTTGCCGTCCCCCTTTTTCAAATTTCAGCTCCTCCGGAAAA
TCGGTCAAAACCGACGGAACTATTTGTGTGCTGAAATACCGCGGATAAAC
CGGACTTGAAATGGACGAGTGGTCAAGACATACATAGTAAAGCTTGTGGG
AACTCCGATTCGGCGGCCCTGCACTCTGTCCGCATTTTTTTCTTTCTTTT
TTTGACTAAAAGGTATGCGCGCGCGTGTCACACGGCTGCTGTTTTTCCTG
TTCATGCACGTTCTAACGCGTTTGCACCATCAAAATCGGCCACACCGAAG
GGACCGGTAGTCTTGAGGAAGCCGGCTTTAGTCGAGGCCATGGCGGAAAG
GGGCGACATGAGCAAGGTGCAGGCCGAAGCGGCACTGGCTGCGTTCACCG
ACGTCATCAAGAGCAACGTCGCCGGTGAGAGGAAAGGATTCTGCCGCACG
TAATTTGACGGTGTGTACCACACCCCCTCGAGGCGATTAAAAAAAAATAA
ACGGAAGCTCCGGAGAATCAGCGCCGGGATTCTTAAGGGGTGGCGTTGAC
AAGAAATTCACCAAGCGCTTTAGGAAACCACATGGTTTGGCACTCGATGC
AGAACTGGAGTTTTGCAAATCAGCTCAAGGGTGTGGTAGAATCGCCATCA
TTAAAATTATTAGTAAATATTTCTAATGTCCCCCTTCGGCATGTTGCGTA
GGTTTCTCCTAAGGGCAACGCAAGTGGAAAATGTAACATGACAGGCTCAC
AAGATGTGCTGGTATGAGTGGGTGCCCTGTGTCTCTGTGAGAATATGTAG
CCTTCGGAAGTCAAGCTTGTATGCGCGCAGTATTTCCCTGCCGCTTGCAG
CGGTCTCTTACTTCTGCTGTGTCGCTGCTGCGCTGTCGATACCTCAGGGT
GCCAGCTCAGTGTAGCACGAGCCCTGCCACGTGTGGCGTGCCAAACCACG
TGGGTATACCGTATATGTCACAAGATAACACACCCCCTTGACCGATTTTC
GAAGCTCGATTTCCCATCTGCAGGAACGGTCGCAGCGCCGAAAACGGCGG
CGTTGAAACCGTCTTGTCGAGAGCTTTTCGAAAATTTATCATTTCGTTTA
TGCATCCTCTTCGTCGTGGAGTAATCGAGCTTTGAAAATCGGTCCAGGGG
GTGTGTTATCTTGTGTCATATACGGTAACCCTGCATCAGGCCGCGTTCCA
TGCGCCCGCAGTCGGTCACTCTGTCACCTTCCCTTTTCGTATGGCTAGTC
ATTGCTCCGGTCGAAAGAGTAGTCTTTTTTTGGGTGTACGGTAAAGCTGA
GGAGCGTGCATCAGCTTTTCTCCCTGCTGTACTGAGACACCCGGACGTGT
TTGAACTATTCCATGCTTTCGTCCGACCTGTCAACATGGCTCTTGGTGCG
TCTGGATCAACGGGTCACAAGTTTGTAACATGGTCGGCGAATGTATTCAT
CTGTGGTATGCGCGTGCGCCGAGAGAATCCTTTTTTTTTATGTGTTAGCA
GCGCGTCCGGTGCTTGTTTTGCAGCTGTTCGAAGTCCATGTAAAAGGCCA
CATCAAAGATCGTGGGATAAAGCTGATTGAAAAGCCAGCCTTGAGATGTG
TCGTTGCTCACCTCCGTTGGTTTAAGCCTGTATGTGTCCAGTTACAGCGA
AAAAAGCGTCCCGCCGAGACGCCTGCAGTGTACGTCTTTTAGGGTTTCAA
CATCTTTGGCGCGCTCTGGTTAAGCACGGAAAACATCTCAGAAAAAAGTC
AGCTCCGGTGGCTGTATTTGTCGGGCACACGTGCCTCAGATGCCTGGCAA
TCTCTACGCTTGTTCGGTAATTTACCGACAGGCCCGAAGTTTGACGGCAG
GAAACAAGCACGCGAAAAGATGGACTCTCACCGGAGAAATGGATGCACAG
GTGCAAGAAATTGTGGGTTTGTATGCTTACATAATTGTGTTGGAGGCTTG
CGATGCACGCAATCGACACGATCGCCTTACTTTTACGCCCTGCTTCATTT
CCTCAAAATGACGGCGGAGTGATTGCACTTGACGCTCGATCGCACAGTAC
CTTGCGAAATGTGCACGCGACGTGTGGTTTTCTCGGCATCTCACGCTACG
CAGAAGGCCTCTCGGCTGAGATTGGTATCAAGAGGTAGTAGGAGGCGAAA
AAAGCTTTGCGTTGCGAAGAAAATGAAATATAATGTCTTTTTGCCCCGTT
TCGTTCAACGGTGTTGACATGCCATGTTCGAAACTCTCGAAGGCTTTCGT
TCGTATCCTGAATCCTTGTTCGTCGAGTTCAATGCAGCAATGCTTATCAG
ACATTTCGCATTGTACCACCCTTGAGGACAAGCGAAACCTCCCCTCCCGG
CGATGGCATCTGGCACAGCGTCGATATTGTCTTTTCCAAATTCCTCCTTC
GGCATCTCAAAACTTCAATGCTAACGGGATGCGAGCAGTTAGGTCTTTGT
TGTTCCCTCCACTTTCTTCCCAAGTTTTCTCGTTTTTGGCTCAGCTAAAA
TCGATCTCACCTCGTTTCGGGCTTCAAAAATCGTTAGCCGTACATTCGGG
ACCAAATCAGCAACTGCCCGTACCTGATTCAACGGAGAACGTTCCCAATC
ACATTTGGGTGGTGCTGAGAAGGAATGGGTAGATAGACGCGACGTTCAGG
TTACTGAAATCGAGCGCAATCCAAATACTTGGCTGGTCTGGACAGATGGG
AAGAAGATCAGCTTGCAGGGGTTTGGGACGTTCGAGGGACGCTCCCGAAA
GGGCCGCACGGGCCGCAACCCGTCCACCGGCGCGGAGCTAACAATCAAGC
CAACCACCGTACCAGTATTCACAGCGGCGAAGGCCTTCAAGGACATGGTG
AGAGCCCCTCCCCATACTACACGAGACACACCAACTACGCGTTCACGCTA
GAGCTCCGCGCACGCTAAGCGGGCACGCTTGCAGAAGGAAGTCATAATTT
TGGCACCTTTACCCGCGTGCGCTTTTGTCACTCGCGCAAGGCCGCAGATA
GCGCAAAACATGGTGTATCTTTTTCGTGGCATTGCTGCTCTCGCAGGTGT
GGGGCGTATGTCCCTGTGTTTGTTTTCCGCCGTTGAGCCTGGTTGCTTTC
GATTCAGATTGAGCACAGGAACTTGTGTGAGCCCGCGTGGGTGACTCGGG
GCTTGAAAGCTCGTGGGTCAGGTTTGATCATGACTCGAATTTTCGGGTCG
AAGATTCACCCTGAGAATCAAGTGCCTTTGGGAGTTGGAAAGCGTGCTTC
TTTTTGTGGTACTGACGCCTTCCCATCACTTCGTGCTTGATGCTTCACCA
GGTAAAGGCTGCGCACACAGACTGAAAGGCTGTGCACTCCAAATCGGGCG
GCTGAGGGCGGGCGAAGAGTTTGTCGCCCCCGTGTATCTTTCCGTATCTG
GTTTTTGCCTGTCGATGACGGATCACCGTTTCCACGCACTAGTACAGGTG
TGGAACCGTGGGAAAGTAGTATTCGGGAGTTTTATGGAGAGGCAGGGGCA
GGCGAAGGCAGATAGCTGATGATCCTTACCGTTGTGACTTTGGGACGCCA
GGCATATATACTTTGTGTGCCTCTGTTGCTTCTCCCCTTCCCGGCTTATC
AGGCGCTGAAATCATTCGCAGACCAGCAAGGCCAATGGTCGCCAGCGAGT
TTGTTTCATTGCTCGCACTCATTGCTCGCACGGCGGTGCGCCCTGCACAC
ATCAGGTGCCCGGTGAAGGAGACGCTGACTCCGCATAGCTGTCACACAAT
TCAACACCCCAACCATGCCTTGTGTTGTCAACTTGGTTGCTACAGAGGCT
GTCAGCCATGATGTAAACAATGTTTCCCTTGTTGTCACATGTTTGTAGAT
TCACCCCACGCGCATGTACGCCGCGGAGGCGAGGGACACACAGTAATCCC
AACGCATCATGCCAAACTCATTGCACCGCAGGTGATCTGCGAACGGTCCA
GAAGTACTCTGCGAATCACAAATTGTCACAAATTCACGGTCAAGTACACT
CAACAGCCCCCTTGCTTGTGGCATAACCATATACTTCAAAAACCAAAGCG
GGGACTCCAACATAATTGACTTATTATTTCACTCCTACAAGCATACTAGC
AAGAGAACTACGGCAACAAAATGTTGCTGCTGGCAAAGAGTAGTCTATTG
CAAAACAAACACAAAATATAAAGTGCTCGTCAGGAATGACACGAAGGCTT
CCGTGACGAAATAACCTCTCCGTACCAAACCTCGTGTAAATACCGGGGGC
AAAGGCAGACAAATAATAGTTCCCCAACAATCTCCCAAACCTAAACTCCT
GGAAATCATCACTTGGATGAAAAACGAAACATAAAACCAAGGACAAATAC
CGTGTTCTTGCAAATCAGCAAACAATCAATTCGAATTTATGGCAAACCTG
CCGCGAAAGTCATAAAATTGGAACGGCAGTGCCTCCTCCACAAGAACGTC
AGCGTGTTGAAACACCATCCCTGAATAATCTAAATCCGCTTCCTCGCGAC
GAGCTCCCTCAGAAAGTGGCGCAGCACGTCGATGTGCTTCGAGTTCGAGT
TTTAAAAAGGGTTGTGCGCAATCTGGATCGCAACCCTGCTGTCCTCAAAC
ACCGGAACAGACGGGTCACCAGCCTCGGGCAACATGAACGTCCATACCTG
CCTGATAAACTGCGCCTAGTTCACAACGTCCCCGAGCGCGACGTACTCCG
ACTCAGACGTCGACCAGATAATCATGGGTAGTAACGCACTCTGCATCCTC
GAGAAAGAAATTATTGCTGTCCCCCGCACATCACTATTCCTCCTGACACG
GGCAGACCTCCTTCCTAAAATTATACTGGCGTAGTCAGAGTCTCCAAATC
TCTGCATGGTGATACCAGTCGCCGTACCTCTCTCAAGTGTAATCCCCATG
TGACTTGTTCTGCTAGTGGTGTGCCCCAAGATCCCCAATCGGCAAGGCAC
TGCACAAAACCCAAAGCCACCAACGATCGCTCCATTCACCAGAAGCGCGT
GCTTTTCATTTCCTCGACCCCTCTGCTTCAAGTCATGATGACTCTTGACC
AGATGCAGTATCTTTCCCGAGATACGACCACACCCCTTTGGCTGTCGCAT
GTATACAAGCTCCGTGGGTATACCGCACAAAAGTCCGCTCAATATCGTAA
TGACAGATGTAGAGGCCCTTCTCGCACGTAAGGGCAGTCAGCAGACGAGA
ACTAGACGCGGACACGGTCGGCGTATGGCCCTCACCGTAGACACAGACAG
ACAAACAGTCCAAGCCGGTCCTCAGCTTTGAGGTGAGGGCTTCTCGGGCG
GGAGACGTCAGTCTGGCGCTGGTTGGTTGAGAACCGCGGCGCAGCGGGCC
GTGGCGGTGACGCACGTTGCAGCTCATGGCCGGGACTCGCGGCCCGGCAA
CGTCCATGGGCGCCGATCCCTCTCCTTCGCCCGCGACGTGATGTGATGCG
GGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:3510916..3517069+

>mRNA_P-fluviatile_contig12.1610.1 ID=mRNA_P-fluviatile_contig12.1610.1|Name=mRNA_P-fluviatile_contig12.1610.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=972bp|location=Sequence derived from alignment at P-fluviatile_contig12:3510916..3517069+ (Porterinema fluviatile SAG_2381)
ATGAAGTGCTCGTTTCTCCTTGCTCTGGCACTCCGAGCCCAGGTTGGCCA
CGCCTTTGTCGGGCCGGCGGGAGGGTTGGCCCTTTCAAACTGCTTCTCGG
CCGCTGCTGGAGCGACAACCGGCATCCTGCGGAGGGGAGTGGCTTCGACA
CCGTCGAGGGCCAAGGCATCAACCGACGATGGAGACATGAAGTGCTCGTT
TCTCCTTGCTCTGGCACTCCGAGCCCAGGTTGGCCACGCCTTTGTCGGGC
CGGCGGGAGGGTTGGCCCTTTCAAACTGCTTCTCGGCCGCTGCTGGAGCG
ACAACCGGCATCCTGCGGAGGGGAGTGGCTTCGACACCGTCGAGGGCCAA
GGCATCAACCGACGATGGAGACGGACCGGTAGTCTTGAGGAAGCCGGCTT
TAGTCGAGGCCATGGCGGAAAGGGGCGACATGAGCAAGGTGCAGGCCGAA
GCGGCACTGGCTGCGTTCACCGACGTCATCAAGAGCAACGTCGCCGGGAC
CGGTAGTCTTGAGGAAGCCGGCTTTAGTCGAGGCCATGGCGGAAAGGGGC
GACATGAGCAAGGTGCAGGCCGAAGCGGCACTGGCTGCGTTCACCGACGT
CATCAAGAGCAACGTCGCCGATGGGAAGAAGATCAGCTTGCAGGGGTTTG
GGACGTTCGAGGGACGCTCCCGAAAGGGCCGCACGGGCCGCAACCCGTCC
ACCGGCGCGGAGCTAACAATCAAGCCAACCACCGTACCAGTATTCACAGC
GGCGAAGGCCTTCAAGGACATGATGGGAAGAAGATCAGCTTGCAGGGGTT
TGGGACGTTCGAGGGACGCTCCCGAAAGGGCCGCACGGGCCGCAACCCGT
CCACCGGCGCGGAGCTAACAATCAAGCCAACCACCGTACCAGTATTCACA
GCGGCGAAGGCCTTCAAGGACATGGTAAAGGCTGCGCACACAGACTGAGT
AAAGGCTGCGCACACAGACTGA
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