mRNA_P-fluviatile_contig12.1608.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5KNY4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY4_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.370e-47 Identity = 105/161 (65.22%), Postives = 121/161 (75.16%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG DSS DS ED +RS EE+ ALR ++ +LT+Q+ QL+ LV+ +M+A EEPAGT +G DRG A ESA A + AEGGAP GSA+D Y REP RESGPSGRHSGEAGGF P+EVRVAAAH+Q Y SA G G AVGFGYGATTPA GYQSVRY
Sbjct: 4 RKDGGDSSSDSAAEDRKRSREELVALRTQVSSLTDQMSQLMSLVEDTMKASKREEPAGTMEGAADRGDARESAAAESTNAEGGAPWTGSAQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRVAAAHNQ-DYSSAMGDGGAAVGFGYGATTPATGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5LCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCX0_9PHAE) HSP 1 Score: 161 bits (407), Expect = 5.170e-47 Identity = 103/161 (63.98%), Postives = 121/161 (75.16%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R++G DSS DS ED +RS EE+ AL ++G+LT+Q+ QL+ LV+ +M+A EEPAGT +G DRG A ESA + AEGGAP GSA+D Y REP RESGPSGRHSGEAGGF P+EVRVAAAH+Q Y SA G G AVGFGYGATTPA GYQSVRY
Sbjct: 4 RSNGGDSSSDSAAEDRKRSREELVALTTQVGSLTDQMSQLMSLVEDTMKASKKEEPAGTMEGAADRGDARESAAPESTNAEGGAPWTGSAQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRVAAAHNQ-EYCSAMGDDGAAVGFGYGATTPAMGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5K761_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K761_9PHAE) HSP 1 Score: 155 bits (392), Expect = 9.280e-45 Identity = 99/161 (61.49%), Postives = 118/161 (73.29%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG DSS DS ED +R EE+ ALR ++ +LT+Q+ QL+ LV+ +M+A EEPAGT +G DRG A ESA A + AEGGAP GSA+D Y REP RE GPSGRH+GEAGGF P+EVR+AAAH+Q +Y A G G AVGFGYG TTPA GYQSVRY
Sbjct: 4 RKDGGDSSSDSAAEDRKRPREELVALRTQVCSLTDQMSQLMSLVEDTMKASKKEEPAGTMEGAADRGDARESAAAESTNAEGGAPWTGSAQDGRYLREPIREYGPSGRHTGEAGGFVPQEVRIAAAHNQ-NYSRAMGDGGGAVGFGYGTTTPATGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5L8M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M7_9PHAE) HSP 1 Score: 152 bits (384), Expect = 6.250e-44 Identity = 100/159 (62.89%), Postives = 114/159 (71.70%), Query Frame = -1
Query: 1 DGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 471
DG DSS DS ED +RS EE+ ALR ++ +LT+Q GQL+ LV+ +M+ EEPAGT +G D G A ESA A + AE GAP GSA+D Y REP RE GPSGRHSGEAGGF P+EVRVAAAH Q Y SA G AVGFGYGATTPA GYQSVRY
Sbjct: 6 DGGDSSSDSAAEDRKRSREELVALRTQVNSLTDQTGQLMSLVEDTMKTSNKEEPAGTMEGAADLGDARESAAAESTNAEVGAPWTGSAQDGRYLREPVRECGPSGRHSGEAGGFVPQEVRVAAAHHQ-DYSSAMEDGGAAVGFGYGATTPATGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5L0N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N1_9PHAE) HSP 1 Score: 155 bits (391), Expect = 7.040e-44 Identity = 103/161 (63.98%), Postives = 117/161 (72.67%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG DSS DS ED +RS EE+ ALR + +LT+Q+ QL+ LV+ +M+A EEPAGT +G DR A ESA A + AEGGAP GSA+D Y REP RESGPS RHSGEAGGF P+EVRVAAAH QG Y S G G AVGFGYGATTPA GYQSVRY
Sbjct: 4 RKDGGDSSSDSAAEDRKRSREELVALRTQGSSLTDQMSQLISLVEDTMKASKKEEPAGTMEGAADRRDAMESAAAESTNAEGGAPWTGSAQDGRYLREPVRESGPSERHSGEAGGFVPQEVRVAAAHIQG-YCSVTGDGGAAVGFGYGATTPATGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5K0G8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G8_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.190e-43 Identity = 104/161 (64.60%), Postives = 120/161 (74.53%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG DSS DS ED +RS EE+ ALR ++ +LT+Q+ QL+ LV+ +M+A E PAGT +G DRG A ESA A + AEGGAP GSA+D Y REP RESGPSGRHSGEAGGF P+EVRVAAAH+Q Y SA G G AVGFGYGATTPA GYQSVRY
Sbjct: 4 RKDGGDSSSDSAAEDRKRSREELVALRTQVSSLTDQMSQLMSLVEDTMKASKKEGPAGTMEGAADRGDARESAAAESTNAEGGAPWTGSAQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRVAAAHNQ-DYSSAMGDGGAAVGFGYGATTPATGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5KG88_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG88_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.590e-43 Identity = 103/161 (63.98%), Postives = 120/161 (74.53%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
RNDG DSS DS ED +RS EE+ ALR ++ +LT+Q+ QL+ LV+ + +A EEPAGT +G DRG A ESA + AEGGAP GSA+D Y REP RESGPSGRHSGEAGGF P+EVR+AAAH+Q Y SA G G AVGFGYGATTPA GYQSVRY
Sbjct: 4 RNDGGDSSNDSAAEDRKRSREELVALRTQVSSLTDQMSQLMSLVEDTTEASKKEEPAGTMEGAADRGDARESAAVESTNAEGGAPWTGSAQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRLAAAHNQ-DYCSAMGDGGAAVGFGYGATTPATGYQSVRY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5KE03_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE03_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.480e-42 Identity = 101/161 (62.73%), Postives = 117/161 (72.67%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG DSS DS ED +RS EE+ ALR ++ +LT+Q+ QL LV+ +M+A EEPA T +G D G A ESA A + AEGGAP GSA+D Y REP RESGPSGRHSGEAGGF P+EVRVAAAH+Q Y SA G AVGFG+GATTPA GYQSVRY
Sbjct: 4 RTDGGDSSSDSAAEDRKRSREELVALRTQVSSLTDQMSQLRSLVEDTMKASKKEEPARTMEGAADCGDARESAAAESTNAEGGAPWTGSAQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRVAAAHNQ-DYSSAMGD--GAVGFGHGATTPATGYQSVRY 161
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5KUM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM2_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.240e-41 Identity = 100/161 (62.11%), Postives = 117/161 (72.67%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG DSS DS +D +RS EE+ ALR ++ +LT+Q+ QL+ LV+ +M+A EEPAGT +G DRG A ESA A + AEGGAP GSA+D Y REP RESGPSGRHSGEAGGF P+EVRVAAAH+Q SA G G AVG GY ATTPA GYQS RY
Sbjct: 4 RKDGGDSSSDSAAQDRKRSREELVALRTQVSSLTDQMSQLMSLVEDTMKASKKEEPAGTMEGAADRGDARESAAAESTNAEGGAPWIGSAQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRVAAAHNQDCR-SAMGDGGAAVGLGYEATTPATGYQSARY 163
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Match: A0A6H5KG71_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG71_9PHAE) HSP 1 Score: 154 bits (389), Expect = 7.150e-41 Identity = 100/161 (62.11%), Postives = 117/161 (72.67%), Query Frame = -1
Query: 1 RNDGDDSSRDSVVED-ERSTEEVSALRREIGTLTEQVGQLLLLVQGSMQARMTEEPAGTTDGVTDRGGATESAGAGAAGAEGGAPRPGSARDETYPREPFRESGPSGRHSGEAGGFDPREVRVAAAHSQGSYGSAPGGVGTAVGFGYGATTPA-GYQSVRY 477
R DG D S DS ++ +RS EE+ ALR + +LT+Q+ QL+ LV+ +M+A EEPAGT +G DRG A ESA A + AEGGAP GS +D Y REP RESGPSGRHSGEAGGF P+EVRVAAAH+Q Y SA G AVGFGYGATTPA GYQSVRY
Sbjct: 4 RKDGGDPSSDSAADNRKRSREELVALRTQDSSLTDQMSQLMSLVEDTMKASKEEEPAGTMEGAADRGDAWESAAAESTNAEGGAPWTGSVQDGRYLREPVRESGPSGRHSGEAGGFVPQEVRVAAAHNQ-DYSSAMGDGAAAVGFGYGATTPATGYQSVRY 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1608.1 >prot_P-fluviatile_contig12.1608.1 ID=prot_P-fluviatile_contig12.1608.1|Name=mRNA_P-fluviatile_contig12.1608.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=118bp VPYTLVPRRGGGSISKTYSSAHSSRGTTITSLTVSSGYSHLSGVETPCFAback to top mRNA from alignment at P-fluviatile_contig12:3494933..3495409+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1608.1 ID=mRNA_P-fluviatile_contig12.1608.1|Name=mRNA_P-fluviatile_contig12.1608.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=477bp|location=Sequence derived from alignment at P-fluviatile_contig12:3494933..3495409+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3494933..3495409+ >mRNA_P-fluviatile_contig12.1608.1 ID=mRNA_P-fluviatile_contig12.1608.1|Name=mRNA_P-fluviatile_contig12.1608.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=708bp|location=Sequence derived from alignment at P-fluviatile_contig12:3494933..3495409+ (Porterinema fluviatile SAG_2381)back to top |