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Homology
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: D8LST9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST9_ECTSI) HSP 1 Score: 548 bits (1411), Expect = 1.060e-192 Identity = 271/328 (82.62%), Postives = 291/328 (88.72%), Query Frame = 1
Query: 1 MAAPASSTARQVPIVCPGHSRPLAEVSYCPETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRSGEKVQKLQVAGAVMDLEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQTTA-SAAAATADGAAG 981
MAAPA++ ARQ+PIVCPGHSRPLAEVSYCPETPDG FLISGCHAKTPMIRNG+TGDWIGTFVGHKGAVWGVALD+TGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILR+FD ASPGS PTEITVFPGGEETPKVSRV+SKARWGKDPNT++TGSADGFVRVWDVRSGEK++K+QVAGAVMDLE+SWDK +ATVAAGDTVHFF+T GGKRF+AGGSDLWVRV D+DTGAELECLKGHHGPVRCLRYAPDGK+YATGSEDGTIRLWQ+ A SAAA A G +G
Sbjct: 1 MAAPAAA-ARQIPIVCPGHSRPLAEVSYCPETPDGTFLISGCHAKTPMIRNGSTGDWIGTFVGHKGAVWGVALDDTGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDT-------------------------GGKRFMAGGSDLWVRVLDFDTGAELECLKGHHGPVRCLRYAPDGKTYATGSEDGTIRLWQSNAPSAAAGAAAGTSG 302
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A6H5KS17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS17_9PHAE) HSP 1 Score: 516 bits (1330), Expect = 1.300e-180 Identity = 249/288 (86.46%), Postives = 272/288 (94.44%), Query Frame = 1
Query: 142 MIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRSGEKVQKLQVAGAVMDLEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLK-------GHHGPVRCLRYAPDGKSYATGSEDGTIRLWQTTA-SAAAATADGAAG 981
MIRNG+TGDWIGTFVGHKGAVWGVALD+TGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILR+FD ASPGS PTEITVFPGGEETPKV+RV+SKARWGKDPNT++TGSADGFVRVWD+RSGEK++K+QVAGAVMDLE+SWDK +ATVAAGDTVHFF+T D +E+KRH+MPINFRNEGGASLHPGGKRFIAGGSDLWVRVFD+DTGAELECLK GHHGPVRCLRYAPDGK+YATGSEDGTIRLWQ+ A +AAAA+A G +G
Sbjct: 1 MIRNGSTGDWIGTFVGHKGAVWGVALDDTGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVARVISKARWGKDPNTVLTGSADGFVRVWDIRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTGDLSEVKRHTMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDFDTGAELECLKASRGRARGHHGPVRCLRYAPDGKTYATGSEDGTIRLWQSNAPAAAAASAAGTSG 288
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A835YS18_9STRA (WD40-repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS18_9STRA) HSP 1 Score: 429 bits (1103), Expect = 6.970e-146 Identity = 203/311 (65.27%), Postives = 245/311 (78.78%), Query Frame = 1
Query: 1 MAAPASSTARQVPIVCPGHSRPLAEVSYCPETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRSGEKVQKLQVAGAVMDLEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLW 933
MA+P S +RQ+PIVCPGHSRPL EV + PETPDG+FL+SGCHAKTPM+R G TGDWIGTF GHKGAVWGVALD ++AATASADFSARLWDA++G HE+ HKHIVK V F+ D + LAT GHEGI+R+F VA P P + +V E T ++K RWG +P+ +++GS+DG VR+WD R+ E +++++V GAVMD+EVS S+ TVAAGD V F + +K+H MPINF+NEGGASLHP GKRFIAGGSDLWVRVFD++TGAELECLKGHHGPVRCLRY P G SYATGSEDGTIR+W
Sbjct: 1 MASPESVISRQIPIVCPGHSRPLTEVVFSPETPDGVFLMSGCHAKTPMLRRGDTGDWIGTFEGHKGAVWGVALDPQAMIAATASADFSARLWDAISGKLTHEWPHKHIVKGVDFSQDSTTLATGGHEGIVRLFQVAQPDEEPRQFSV--SSERT-----TINKVRWGLEPHQLLSGSSDGAVRMWDARTLELLKEVRVEGAVMDMEVSKPMSIITVAAGDKVTFLDARTLEVIKQHQMPINFKNEGGASLHPSGKRFIAGGSDLWVRVFDFETGAELECLKGHHGPVRCLRYTPGGLSYATGSEDGTIRIW 304
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A7S2XYA9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA9_9STRA) HSP 1 Score: 398 bits (1022), Expect = 1.480e-133 Identity = 193/315 (61.27%), Postives = 237/315 (75.24%), Query Frame = 1
Query: 28 RQVPIVCPGHSRPLAEVSYCPETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRS-GE-KVQKLQVAGAVMDLEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQTTASAAAATA 966
RQ+PIVCPGHSRPL+ V Y TPDG FLISGC K PM+R G TGDWIGTF GHKGAVW LD LAATAS DFSA+LW+A++G ++H+FVH+HIVKTV FA DRSKL + G EG+LR+FD++ P + P + ++ S V+KA WG + + ++TG++DG VR WD+RS G+ V+++ V GAVMD+E+S D TVAAG V+F + ED + LK H MP+NFR EGGASLHP +FIAGGSDLWVRVFDY+TG ELEC KGHHGPVRCLRY+PDG SYATGSEDGTIR+WQTT A ++A
Sbjct: 6 RQIPIVCPGHSRPLSNVHYSAVTPDGFFLISGCLDKLPMLRRGDTGDWIGTFEGHKGAVWCAKLDNDATLAATASGDFSAKLWNAISGEEMHQFVHRHIVKTVEFAPDRSKLISGGQEGLLRIFDLSRPEADPDQANHKQPDQQG---SLAVTKAVWGAEADLVVTGTSDGTVRTWDLRSLGDGPVKEVSVEGAVMDMEMSRDSRTVTVAAGTQVNFLSAEDLSVLKAHQMPVNFREEGGASLHPDKTKFIAGGSDLWVRVFDYETGQELECHKGHHGPVRCLRYSPDGGSYATGSEDGTIRIWQTTLKPATSSA 317
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A6U3S695_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S695_9STRA) HSP 1 Score: 355 bits (911), Expect = 1.750e-116 Identity = 174/319 (54.55%), Postives = 222/319 (69.59%), Query Frame = 1
Query: 16 SSTARQVPIVCPGHSRPLAEVSYCP----ETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDV---RSGEKVQKL----QVAGAVMDLEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQT 939
SS RQ+PIVCPGH+RPLAE+S+C + + FL+S CH K PM+R+ TGDWIGTF GHKGAVW LD GLLA TAS DFS ++WDA+TG+ + + HKHIVKT+ F+ D +AT GHEG+LRVFD+ +T+ GE+T ++K W + T++ +DG + W+V GE+ +L +V V D+E+S D TVAAG V+FF+ E+ + L H MPI+FR+EGGASLHP GK+F+AGGSDLWVRVFDY+TG ELEC KGHHGPVRC+RY PDGK+YATGSEDGTIRLW+T
Sbjct: 22 SSRGRQIPIVCPGHTRPLAELSFCTVEETKAEERTFLVSACHDKMPMLRDAKTGDWIGTFAGHKGAVWSCRLDPLGLLAGTASGDFSVKIWDAITGSSLFTYPHKHIVKTLDFSPDSKYIATGGHEGLLRVFDLRKEKEETPILTIKQNGEKTV----TITKCNW-LNATTVLAAGSDGSINYWNVDPKHEGEEQHRLMGTLKVDAEVRDMELSKDFKTLTVAAGTKVYFFDVENKSLLCSHQMPIHFRDEGGASLHPDGKKFVAGGSDLWVRVFDYETGTELECHKGHHGPVRCVRYDPDGKTYATGSEDGTIRLWKT 335
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: B8CFL5_THAPS (WD40-repeat protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFL5_THAPS) HSP 1 Score: 347 bits (890), Expect = 1.830e-113 Identity = 173/324 (53.40%), Postives = 223/324 (68.83%), Query Frame = 1
Query: 13 ASSTARQVPIVCPGHSRPLAEVSYCP--ETPDG-----IFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRSGEKVQKL----QVAGAVMDLEV----SWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQT 939
AS+ RQ+PIVCPGH+RPLAE+ +C + P+G FL+S CH K PM+R+ +GDWIGTF GHKGAVW LD L ATAS DFS ++WDA+TG+ +H F HKH+VK+ ++ D +LAT G+EGILRVFD+ P +P E ++ K +SK W D +T++ +DG +R W+V + + Q+L QV V D+E+ S +K++ TVAAGD V FF+ + + MPI+FR EGGASLHP G +FIAGGSDLWVRVFD+++G ELEC KGHHGPVRCLRY PDGKSYATGSEDGTIRLW+T
Sbjct: 9 ASTKGRQIPIVCPGHTRPLAELQFCSVNDNPNGDDEPRTFLVSACHDKCPMVRDAESGDWIGTFKGHKGAVWSCRLDPAAFLGATASGDFSVKVWDAITGSPLHSFPHKHVVKSCDWSPDSKRLATGGNEGILRVFDIVHPEKAPLEFV------QSEKEVVSISKCNW-IDNHTVLAACSDGSIRFWNVDASDPTQQLTRTLQVKDGVRDMELQALSSNNKTILTVAAGDKVTFFDMATGDMIHSYKMPIHFREEGGASLHPSGAKFIAGGSDLWVRVFDFESGEELECHKGHHGPVRCLRYHPDGKSYATGSEDGTIRLWKT 325
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A4D9D672_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D672_9STRA) HSP 1 Score: 343 bits (880), Expect = 3.550e-112 Identity = 174/315 (55.24%), Postives = 209/315 (66.35%), Query Frame = 1
Query: 1 MAAPASSTARQVPIVCPGHSRPLAEVSYCPETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGK-DPNTIITGSADGFVRVWDVRSGEKVQKLQVAGAVMDLEVSWDKS-MATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQT 939
MA S RQ+PIVCPGHSRPLA V Y P TPDG+FLIS CH K PM+RNG TGDWIGTF GHKGAVW L++ A T S DFSAR+WDA+TG ++ F HKHIV+TV FA D + + G+EG LRV+D+ P + P + + PK SKA W + DP +R+ + Q +V G VMDLE+S + + TV AGD V F +T +K MP++FR EGGASLHP + FIAGGSDLWVRVFDY+TGAELEC KGHHGPVRCLRYAP+G SYATGSEDGT+R+W T
Sbjct: 1 MAENKESRNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGETGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSARVWDAITGAELEHFPHKHIVRTVEFAPDSRRFVSGGNEGKLRVYDLMEPSAPPMTM-------DLPKSGTTFSKAVWDQSDPQXXXXXXXXXXXXXXXLRARMETQVAEVQGNVMDLELSPNVGDILTVCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWAT 308
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: K3WFN9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFN9_GLOUD) HSP 1 Score: 339 bits (869), Expect = 5.080e-110 Identity = 174/325 (53.54%), Postives = 218/325 (67.08%), Query Frame = 1
Query: 28 RQVPIVCPGHSRPLAEVSYCPETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVAS--------PGSSPTEITVFPGGEETPKVSRVVSKARWGK----DPNTIITGSADGFVRVWDVRSGEKVQKLQV-AGAVMDLEVSWDKSMATVAAGDTVHFFNT-EDFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQTTASAAAA 960
RQ+P+VCPGHSRPLAEV Y P TPDG FLIS CH K PM+R TGDWIGTF GHKGAVW +D + AAT SADFS + WDA++G+ + F HKHIVK+V F D ++L TAGHE +LRV+D+ + T I V P TP + +K + K +TG DG + VW++ S +KV + +V AG VMD+E S S+ TVAAG V+F++ +F ++ MPI+F EGGASLHP +FIAGGSD WVRVFDY TG LEC KGHHGPVRCLRY+P G+S+ATGSEDGTIR+WQ+ + +AAA
Sbjct: 14 RQIPVVCPGHSRPLAEVQYSPVTPDGCFLISACHDKLPMLRRADTGDWIGTFEGHKGAVWSATIDASAQFAATGSADFSVKFWDALSGDVITTFEHKHIVKSVAFTPDGARLLTAGHEKLLRVYDLLTVKEQFEHYKSEGRTGIFVPP----TPPTLELATKDQIRKVVVISDALAVTGEVDGTITVWNLESAQKVHEFKVDAGGVMDMEASRKNSVLTVAAGKKVYFYDVPNNFALIRSFMMPISFAEEGGASLHPHEDKFIAGGSDTWVRVFDYQTGEMLECHKGHHGPVRCLRYSPRGESFATGSEDGTIRIWQSDSKSAAA 334
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A7S2LD36_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LD36_9STRA) HSP 1 Score: 339 bits (869), Expect = 5.990e-110 Identity = 176/343 (51.31%), Postives = 219/343 (63.85%), Query Frame = 1
Query: 10 PASSTARQVPIVCPGHSRPLAEVSYCP-------ETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRSGEKVQKLQVAGAVMD-------LEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASLHPGGKRFIAGG-------------------SDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQT 939
PA++T RQ+PIVCPGH+RPLAE+ +C E FLIS CH K PM+R+G TGDWIGTF GHKGAVW LD LLA TAS DFS ++WDA+TG +H F HKH+VKTV ++ D +LAT GHEGILR+FD++ P P +++ K +SK W D +T++ DG +R W+V + ++L A AV D L +S K + TVAAG+ V FF+ ++K H MPI+F+ EGGASLHP GK+FIAGG SDL V VFD++TG LEC KGHHGPVRCLRY PDGKSYATGSEDGTIRLW+T
Sbjct: 14 PATTTGRQIPIVCPGHTRPLAELQFCSISENDSDEKQQRTFLISACHDKMPMLRDGATGDWIGTFAGHKGAVWSCRLDPAALLAGTASGDFSVQVWDAITGQSLHSFPHKHVVKTVDWSLDSKRLATGGHEGILRIFDMSQPKKEPLMF------DQSSKEKVSISKCNW-LDNSTVLAAGEDGNIRFWNVDETDPSKQLTKALAVGDSIRDMELLTLSSGKRILTVAAGEKVTFFDIASGQQIKSHKMPIHFKVEGGASLHPSGKKFIAGGGRRGGSMALGAGKEGGELGSDLLVYVFDFETGKMLECHKGHHGPVRCLRYHPDGKSYATGSEDGTIRLWKT 349
BLAST of mRNA_P-fluviatile_contig12.1606.1 vs. uniprot
Match: A0A7S1UTQ8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTQ8_9STRA) HSP 1 Score: 337 bits (863), Expect = 8.690e-109 Identity = 172/333 (51.65%), Postives = 220/333 (66.07%), Query Frame = 1
Query: 28 RQVPIVCPGHSRPLAEVSYCP---ETPDGIFLISGCHAKTPMIRNGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPGGEETPKVSRV---------------------VSKARW-GKDPNTIITGSADGFVRVWDVRSG---EKVQKLQVAGAVMDLEVSWDKSMATVAAGDTVHFFNTE-DFTELKRHSMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYATGSEDGTIRLWQT 939
RQ+PIVCPGH+RPLAE+ +C E D L+S CH K PM+R+G TGDWIGT+ GHKGAVW LD +G LAATAS DFSA++WDA+TG + E HKHIVK+ F+ D KLAT GHEGILR++D A ++T G++ + + ++K W G+ T++ + G ++ W V SG + + LQV V D+E S + + TVAAG V+FF TE D L + MPI+FR+EGGASLHP GK+F+AGGSDLWVRVFD++TG +LEC KGHHGP+RC RYAPDGK+YATGSEDGTIRLW+T
Sbjct: 41 RQIPIVCPGHTRPLAELQFCQISSEEEDRTLLVSACHDKLPMMRDGMTGDWIGTWSGHKGAVWSCRLDRSGNLAATASGDFSAKVWDAITGQALWELPHKHIVKSCDFSPDSKKLATGGHEGILRIYDFAE------KVTSAKAGQKKDPILEIEQIVNNXXXXXXXXXXXXXVAITKLVWIGR--GTVLAADSSGSIQRWKVESGIPTKPLLSLQVHAEVRDMEFSEYQQILTVAAGSKVYFFETEGDMKLLHAYDMPIHFRDEGGASLHPSGKKFVAGGSDLWVRVFDFETGQQLECHKGHHGPIRCCRYAPDGKTYATGSEDGTIRLWKT 365
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 549.7 |
| Seed ortholog evalue | 9.4e-154 |
| Seed eggNOG ortholog | 2880.D8LST9 |
| Preferred name | STRAP |
| KEGG ko | ko:K13137 |
| KEGG Pathway | ko03013,map03013 |
| KEGG Module | M00426 |
| GOs | GO:0000122,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0001894,GO:0001932,GO:0001933,GO:0002009,GO:0002165,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007586,GO:0008150,GO:0008152,GO:0008285,GO:0008380,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010632,GO:0010633,GO:0010646,GO:0010648,GO:0010669,GO:0010717,GO:0010719,GO:0016043,GO:0016070,GO:0016071,GO:0017015,GO:0019219,GO:0019220,GO:0019222,GO:0022600,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023057,GO:0030277,GO:0030334,GO:0030336,GO:0030512,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032797,GO:0032879,GO:0032991,GO:0034622,GO:0034641,GO:0034719,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040012,GO:0040013,GO:0042127,GO:0042325,GO:0042326,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045596,GO:0045892,GO:0045934,GO:0045936,GO:0046483,GO:0048513,GO:0048519,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048871,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051171,GO:0051172,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051270,GO:0051271,GO:0060249,GO:0060255,GO:0060393,GO:0060394,GO:0060429,GO:0060562,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090304,GO:0120114,GO:1901360,GO:1902679,GO:1903506,GO:1903507,GO:1903844,GO:1903845,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2001141 |
| EggNOG free text desc. | negative regulation of transforming growth factor beta receptor signaling pathway |
| EggNOG OGs | KOG0278@1,KOG0278@2759 |
| COG Functional cat. | E |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03041 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | WD40 repeat |
| Ec32 ortholog | Ec-15_002630.1 |
| Exons | 6 |
| Model size | 1492 |
| Cds size | 984 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815533.7048895-UTR-P-fluviatile_contig12:3477860..3478368 | 1622815533.7048895-UTR-P-fluviatile_contig12:3477860..3478368 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 3477861..3478368 - |
| 1693562164.2382004-UTR-P-fluviatile_contig12:3477860..3478368 | 1693562164.2382004-UTR-P-fluviatile_contig12:3477860..3478368 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 3477861..3478368 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815533.7199233-CDS-P-fluviatile_contig12:3478368..3478509 | 1622815533.7199233-CDS-P-fluviatile_contig12:3478368..3478509 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3478369..3478509 - |
| 1693562164.2512121-CDS-P-fluviatile_contig12:3478368..3478509 | 1693562164.2512121-CDS-P-fluviatile_contig12:3478368..3478509 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3478369..3478509 - |
| 1622815533.730906-CDS-P-fluviatile_contig12:3479498..3479659 | 1622815533.730906-CDS-P-fluviatile_contig12:3479498..3479659 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3479499..3479659 - |
| 1693562164.483967-CDS-P-fluviatile_contig12:3479498..3479659 | 1693562164.483967-CDS-P-fluviatile_contig12:3479498..3479659 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3479499..3479659 - |
| 1622815533.7437556-CDS-P-fluviatile_contig12:3480755..3481005 | 1622815533.7437556-CDS-P-fluviatile_contig12:3480755..3481005 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3480756..3481005 - |
| 1693562164.502915-CDS-P-fluviatile_contig12:3480755..3481005 | 1693562164.502915-CDS-P-fluviatile_contig12:3480755..3481005 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3480756..3481005 - |
| 1622815533.7554495-CDS-P-fluviatile_contig12:3481882..3482067 | 1622815533.7554495-CDS-P-fluviatile_contig12:3481882..3482067 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3481883..3482067 - |
| 1693562164.5190632-CDS-P-fluviatile_contig12:3481882..3482067 | 1693562164.5190632-CDS-P-fluviatile_contig12:3481882..3482067 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3481883..3482067 - |
| 1622815533.7675045-CDS-P-fluviatile_contig12:3486168..3486285 | 1622815533.7675045-CDS-P-fluviatile_contig12:3486168..3486285 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3486169..3486285 - |
| 1693562164.5287867-CDS-P-fluviatile_contig12:3486168..3486285 | 1693562164.5287867-CDS-P-fluviatile_contig12:3486168..3486285 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3486169..3486285 - |
| 1622815533.7771719-CDS-P-fluviatile_contig12:3488411..3488541 | 1622815533.7771719-CDS-P-fluviatile_contig12:3488411..3488541 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3488412..3488541 - |
| 1693562164.5378997-CDS-P-fluviatile_contig12:3488411..3488541 | 1693562164.5378997-CDS-P-fluviatile_contig12:3488411..3488541 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 3488412..3488541 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1606.1 >prot_P-fluviatile_contig12.1606.1 ID=prot_P-fluviatile_contig12.1606.1|Name=mRNA_P-fluviatile_contig12.1606.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=328bp
MAAPASSTARQVPIVCPGHSRPLAEVSYCPETPDGIFLISGCHAKTPMIR
NGTTGDWIGTFVGHKGAVWGVALDETGLLAATASADFSARLWDAVTGNQV
HEFVHKHIVKTVHFAADRSKLATAGHEGILRVFDVASPGSSPTEITVFPG
GEETPKVSRVVSKARWGKDPNTIITGSADGFVRVWDVRSGEKVQKLQVAG
AVMDLEVSWDKSMATVAAGDTVHFFNTEDFTELKRHSMPINFRNEGGASL
HPGGKRFIAGGSDLWVRVFDYDTGAELECLKGHHGPVRCLRYAPDGKSYA
TGSEDGTIRLWQTTASAAAATADGAAG* back to topmRNA from alignment at P-fluviatile_contig12:3477861..3488541- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig12.1606.1 ID=mRNA_P-fluviatile_contig12.1606.1|Name=mRNA_P-fluviatile_contig12.1606.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10681bp|location=Sequence derived from alignment at P-fluviatile_contig12:3477861..3488541- (Porterinema fluviatile SAG_2381)
ATGGCAGCGCCAGCATCCAGCACCGCACGGCAAGTCCCGATCGTTTGCCC
TGGGCACTCCCGCCCGCTGGCGGAGGTATCTTACTGTCCCGAGACTCCCG
ACGGCATCTTCCTCATCAGCGGTTGCCACGGTGAGGGCTCAGTAAACGTA
AAAGTTTGATCGAGGGCGTGTGTGTGTGCAATACCCTGCAACCCGCTGGG
GCTCTCTTTTGTGCTGCAGTTTGTTGATGTGGATGGTGCAGGGGAGACTA
GGAGCGCGCGAAAAGAACGGGGGGGGATTTCCCCCCCGAAAGCATGATCC
CTTCGCTCTGTAGCATTTATTTGCTTTGTGGTCGGTTCTATTGTATTCTA
GATTTGCTCATTTTACACCACCACGGAGCTCTCTCCCTATCTCTCTCTCT
CTCTCTCTCTCTCTCTCATGTCGCGAGCGCGCATCCATACTCCAAAGCGT
CACTTCTACCCCATATCTTGCCTCTGTTCGGGGGGGGGGGGTATGCCGCA
CGTAGCCACAGCAGCAGCGGCGTCTGGAATTTGGAATTTGGAACTGTCTC
AAATCCCGCCGCCCCCTCTCCAAGTCGCACCAGCAGTCTTAATTGTAGAA
TGAAGCAGAGGAAGTACCGGTGTAGCTGCAGCATCGATGTTATACGACAG
GATAAACTTAACACGGCTCTTTTCATGCGCAAGAAGAGAGTGCATAGATT
ACCCACGCCACGGTGTGGCCAAGATCACGGGAAGTCGCCGCCACATCAGT
GTTTCTTGAAACTTGCCGTGTTTGCATGGGCCAAAAATATCCCACCTTGG
AGCCTGTTGTAAGACCAGTGCTCCCGCAGCATTTCCGTCCGTCTCTGCCT
GAGAATGCCGAGGAGTTCCAACACCGGGTCATGCAAAGGCGGTGTGAGAA
ATACCTAAAATGAATCCAATGAGTTATTGAGAAATTCAATCGTCCTCCGG
TAGGTGAGATATGGTGTACCTCCATTAATCACCCAAGTTACATCCCTGGT
GGTTGCCGGGTGTGTAAAGAGAGATACACTCACCCCCCCCCCACACACCC
CGATCTCCCTTTGGTTCTCGCGCCGTCGCTGTCCCTACGTCATCGTGTCC
TCTCTTTTCGCCGCGTCAAACCAAGATGCGACTTTCTCTCCCTGAAGTTC
AAGTCAATTTGTTGGCGGGATGTAGGCTTGTTGTGGGCATTTTTTTCTCG
ATTTATATACTAAAACTTTGACTCGATACGAATTTTAGCATGATATCTCC
CCCGCCCCTTCGACAATCAGTCCATCGCCTGCGGAGTACAGGCCTCGTGC
CAGCAACCCGGAGTGAGATGCAATTCTTGATGCGTTTGACTGCTGTGGCC
CATTGTTGCCGCACCACGAACACTTCCAAGACACACGATAAGCCATGGGC
CCCGGCCCCGGCGTGTCTGTCGTCTCAAGCGGAGGAGAGCGTGCATCGAC
CCCTGCTGGGGTCGCTCTCTCGTCTCACTTACCCAGAGACACGTGCGGTA
ATTCTACTCCATCGTGCCTTCAATAAACACAGTTTCCATCCTATGCGTCG
CCGTAAAGAAAACTCTCGCTTTACACCCTCTGCCTGCAACGCATGCAAGA
CTTCAGAGTGCACAGTCAGAATGCTACGCACATTGTGTTATGCCCATTGT
GTGCTCCCCGGGCCTTCGCTCTGACGAGGCCCCCCATCCACCATCATTGC
AATCATTGTTGCCTTCAATTTTCAACTTTGAACGCGATAACATTTTCAGC
AGTCGCGTGCCCTTGATGTGGTCTCACACACCGTTGCGCTTTGCCACAAC
TGGGTAGAAGATTGTACGAAGACAGATCGCACACGCACCCCCCTCACGAG
GTGTAGGGCTGCGTCGCTCTCTCTCGATCTCGCGTCTCAAGCCTCGGACT
GTCCCGGCGAGGCTTAATCTTCATCTCTCTACTCGTCTTGAGTCTAACTT
TTAGACGACGACACCATCTCGCTTCGTCCAATCCTACTCTTTGTTGCCCT
CAATGAATCTGGAGTTGTTTTCGCAGTATCGCTGCTACGAATAGTGAATA
CTCAGGTATGGGAGATCCCACCCGTTTACTGTTCGTTTCCGGGCAGCTCT
TCGACCATTGCAACACACGAAAACCACTGGGGAATACCGCCCCAACAGGC
TGTCACGATACCTACTCACCCCCCCACCTTCACAGCCTGCACCCCCATTC
GACCCCTTGAACGCGCCACGACGCATGTTGACTGCTCACGCCGGCCGCTC
TCGTAGCTAAGACCCCGATGATCCGTAACGGGACGACTGGGGACTGGATC
GGGACGTTCGTGGGGCACAAGGGGGCGGTGTGGGGGGTGGCGCTGGACGA
AACCGGCCTGCTCGCTGCGACAGGTGTGCGAGTGTGAGTGTGAGAGTGCT
TGCTTGCTCGCGTGCTTGCTTGCTTGCCTGTGGGCGCTGTTATAATGCAT
TATTTTTGTCGCGGGCTGTCACTCTTTGTTGTGTTTTGGCGAGTTGAACC
ATTAGGAGTGTGTTCAAATGAATTATTATTGCTTGGTGTGCTTTCGTTTT
TTTCGGTTTTTCTCAAGACAATATTATGTCTGAGGTGTATTTTTTCGATT
CTTTGTGTTCGTTCTTTTTTTCTTTCCCGTTTTTTTTTTTTTTTTTTTTG
GCAAGAAACATGGGGCTTATGTGCGCAAAATCGGTGTTGGATGCCGACGC
TCTTGCTCGGCTTCGCCTCAGGGTATGGTCGTTAACATCGAACAATCCGA
AGCACACACTCGTACTGGATCGCGACTGCTTTACGGCAGAATACTCGGGA
AATATAGAATCCCGTGGTGGCTGGATGTGCAATTTTTTCCTAATGTCTTT
TCTCGAGGAGTGATTTTCTTCTTAACACGAGTCAGTATATGCGTGCGCAA
TCGCCCGAACCAGAAGAGGTAGCGTAACCGAATAACTTCGAGTCATGCAC
CAAAACTAGCATGCAATGAGGGGCCTTTTAATTGACCCCTCCCCTCGCCA
ACTGAACACAACCGCAGAGGAAGTGATAGGGAAAAAGATGATCCGGTGTG
GTCAGGCGGTTAAGTGGTGGGACGAAGAGTGGAGGGAAGATATAGGGGAA
CGAAGAAAACTGTTTACGCGGCACATGGATGAGAAGACAGAGGAGAGTTG
GGAAACCTACAGAGCCAAGGAAACATGTGAATGGAGTAGTGAAAAAGAAG
AAGAAAGGCATCTGGGACGAGGTGATGCAGGAAGCGAACGGGGGGTTGGA
GGGTAGCGTAAAACAGATGTGGCAGGGAATAATGGATTGGTAAAAAAGAA
TGAGGATGGGGGGGAAACAGGAGTAGCAACATTGCGAGGCGTAGGCGGTA
AACTAGTCAGCAGTGGCATGGGTGAGAGGCAGGTACTAGCAGGACACTAT
AGGAGACTCGGGGTGCCGTCGGAAAAGGCAGACTTCGACCAAGTATTCAA
GGAAGAGGTAGACGCGTGGGCCCAAGCAGAAGAGAGAGCTTCGATGGAGG
ACGTTGGGAATGCAGAGCTCCAAAAGAAGTTCACCGAGGAAGAGGTTGAG
AGTTGTGTGAAAAAACTGCAGTGTCACAAGGCCGCAGGGGTCGACGGGAT
AGTGAACGAAATCATGAAGTTCGGGGGGGAGGGGATGATTCAGATGATGG
TGCTGTTGTTCAACTGGGTATGGGAAAACGAATACGCACCGAGTAGATGG
AGGGAAGGGGTGGTGGTGAACCTGTTTAAGAAAGGAGATAAGACTGACCC
AGGAAACTATAGGGGAATCACCCTGTTGAGCACGGTAGGGAAAGTGTTCT
TCTAGATCCTCAACAACAGAATAGTACGAGTACTGGAGATGGAAAAGAGA
ATTAGTGAGGGCCAAGCAGGTTTCAGGGAGGTAGGGGGTGTGGAGATCAC
CTACACGGTAGGGAGAATCATACAAGGTCGGAAGAGGGTGGGAAAGCCGA
CATACTGCTTTTTCCTAGACGTTCAGAAAGCGTATGATACAGTATGGAGA
AATGGGCTCTGGAAAAAGTTGGCGAAGTATGGGATGAACGGGAAGATGTG
GAGAATGATTAAGATGACAAGAGAGCAACAAAAGCGCCGTGATGTTAGAT
GGAGAACTCTCGAGGTTCTTCGACATTGAGCAGGGGTCCCACAGGGGTGC
ACAATGTCCCCAACGTTGTTCCAGGTATTCATCAACGACTTACTGAAAGA
GGTAGAGGCGGTAGGGAAGGGAGTAGAAGTAGGGGAAACCTCGGTATCGG
GACTGCTATTTGCTGACGACTTTGTTGGGATGTCGGACACGCCTGAGGGG
CTCCAACTACAGATTAACGCAGCGAAGGCCTATGCTGGTAAGTGGAGATT
CTCGGCCAACGTTCCGAAGTGTGCCGTTATGGTATGCAACGAAGATGGTG
ACGAGGAAGTAGGTGCCAAGTGGACATGGGGGAACAAGGAGCTGCCAAGA
GTGGAAAAATACACATACCGTGGAGTAGAGATAGCAAGAGACTGTAAATG
GGATGCACACATGCACAAAATAGCGGACAAGGGCAAAGCAAGGGCAGGGA
AGTTGCACCCAATCCTAGCAAACCGGCACCTTGATACACGGGTCAAAATG
ACCATTCTGAAAAGTGTTATTATCCCGCCACTAGAGTACGCGGGAGAAGT
TTGGGAAGCGAACAAGAAAATAGCAGCAGAGTTGGAGGCAGCGCAGATGA
AAGCAGCGAAGATCATTCTAGGATGCTCCCAGCGCACAAGTAACGCAGCA
GTAAGAGCAGAGTTGGGGATCTACTCCTTAAGAACGGGAAGAGACAGGAG
GAAGTTGACATGGCAATACCGTACGGAAATCATGGGAAAGGAGAGGTTAC
CGAGAATAGCTTGGGAGGCGAGATGGGTAAACAAGGCCAAGACCCATTGA
GTGGGCTAAGGTTATACAGGGAGTGTGGAGTGGGTTAGATATCGACGAAC
GGGATACGACGGGAGCGGAACGCTTAGAAGGGTACAAGAAGAGTATCTCA
GAAGCCTTTGAAAATGAGAAGACCAAAGCTTGCGGAAAGAGACCAAGGGA
AAGGAGGTTCTAGAAGTGTACGGAAGGCTGAACGAAGGAAAAGGGTTCAA
GGAGTACCTGAACGGACCATTGGATGAAGGGACAAAGATGAAGGCCGAAT
TTAGAACGGGCGACATTGACCTACGGGAACGTAGAAGAGGTTTAGGAAGG
TAGACGACGACGAAGAGAAGTTCAAATGTGACTGGGGCGCCGAATGCGAA
GACCGGGTACATGTAGTTGCGGAATGCCCGTTATACGATCAGGAGAGAGA
AGGGTAAATGGTTGAGACGGAAAATGTAGACAGTCGGTATAGAGAGAAGT
TTGAGGCATGGAACAAAGAGGAGAAGACGGTAGCGGTACTCGGGTGTAAG
ATGTGGCCCAGGACGGACAGGTATAAAGTAGACAGGTTAGGGAAAACATT
TTTGAGCCACCTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGTGATC
GATCCTGCGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGT
CTAACAACTAAGGCATGCAAAACATGAGTACGCCCCCCTCCCCTCGCCAA
CCCTCATAGCGCCTCGCGAGGAGTTTCAGTGATCCAGCAAGTCACAATAA
AGGTTAGGTTGAGGTACATCGCATCGGCGGAAGAAATTCCACTCTACTCT
ATCTACGAATTAGTGCGGAGAATTGTGCCGGTTTAGAGGTGAAATATTTC
AAGGGTCCGTTGTGCAGGGTTTGCAGTACCCGGTTCTGTATCGAAGCGGT
ACCAGCTAATTTTTGCCAGCAGAGTATCCAGGTAGCACCGGTCTTCTGCG
GGTGCTGTACCGAGGCGATACCGAACAGAGTGCTCGGTTCTCTATCGGAG
GGCGTACTGAACAGACGGTATAGACCCGACCGGGAAATCACCCGGAAATA
TGTCCCCCTGTACGGGTTTGTAGTACCCTACGAACCAACAATTGAATTTT
TGGCCTAGTGAAAGGTCAGTCGATTTCGGCCATGTCCCGCCTCTCTACCG
TCTCTCGTTCCGTTGGAGGCGGCGTACACCATACCCCCTTCAGCCGATTT
CCTACAAGACCAACGGCTGTGACTAGTCAGTAGCCTCCACTTGTGCCATG
CTCTCGGAGGCCGATTATTCGCACGCCGTAGTTGGACAGAGTCCACCGCT
TATATCATCCTCGCGACTGCGCCTTCTTTTTCTCTTATTCTCGTCTCTTT
TCCGAGCTCCTGTCGTTCTTACGCGCGCCCGTTTCCCTCTGTTGGTGCAC
ACCCACAGTAACCTCCCCTCCCTCTCCCCCACCCGCGACACACTATCTGC
CCCCGCTCGATCCCACTTTCCTCGCACGCGACCCCTTCCCCTTTCCCATC
TCCATCCGACCCAACCCCCCTTCGCCCCCCCCGTCATCGTGGTCGTCGTC
GTTACCTACATGCATTCATCACAGCGTCCGCGGATTTCTCCGCCCGGCTG
TGGGACGCCGTGACCGGTAACCAGGTCCACGAGTTCGTCCACAAGCACAT
CGTGAAGACGGTGCACTTCGCGGCCGACCGGTCTAAGCTGGCCACGGCGG
GCCACGAGGGCATCCTCAGGGTGTTCGACGTCGCGTCCCCCGGGAGCTCT
CCGACCGAGGTGAGAGCCTGCGGGGATTGCGCGGTTTGTGCGTGTATCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
CCTCGCTCTCTCTCTCTCTCCCTCTCGCTCTCGCTATCTCTCTCCCCCTT
CTTCCTCCCGGTCTCTCGTCTGGTCGGCCTCGCTTGCCAGCTGTGTTTTT
CATCGTTTCATCATGCTCATCAACCGCTCACTGGCCAGTAACGAGCACCT
AATCTTATGCGCTAACAATAACATTCGACACACGCTTGAGACGCTGCGGA
GCCCCTCGAATGATGTGCGCTTATTTGGTGGGCTTCTTCGCGTTTTCGTT
GGCGTTTATGGGGTGGAGTTGAGACGGGCGAATATAGCGTGGTTGTGAAG
TCATCGCGCAGCGTCGCGCGCGCGTCATGGGGTGCATTATTTCCCACGCA
CTCTGTGCTTTTGTGAATATTGGCGTGGTTCTTTGCTCGATCGTCTCTCG
TCGAGAAAACACCTAAGCTCCCCGCTTGTCTTGCATTTTTCCCGTCCGCT
CTGTCGTTTGGAGCTGAGTTTGTTCGTTCGCACCTAAATGCCCCTACGCC
CTCGATCCCGCACGTGTGTTGGCTGTCTGTTTCTTACCTCTTGCTTAATC
ATGTGCTTCTACACCTCTTGTCCGCTGCCGTTCGCTGCGCTGCGGCACCA
ATACATGCACCACAGCTCCTGCCGTTCCCGCTCTTGCGCCGACTCGGAAG
GGTCTATGATCGTCTAATGATAAAAGGCAAGCAGCAAATGAATACCCCCC
CCCACCTGCTCGCTTATTCCTCCCGCTTTCCTCCCGCGTACCTCCCCCCC
TCCCTCCCCCCTTCTCTGGAACGCGATGCCCCGCAGATCACCGTCTTCCC
GGGGGGCGAAGAGACGCCAAAGGTGTCCCGAGTGGTCTCCAAGGCGAGGT
GGGGTAAGGACCCGAACACCATCATCACCGGGTCGGCGGACGGTTTTGTC
AGGGTGTGGGACGTGCGAAGCGGGGAGAAAGTGCAGAAGTTGCAGGTGGC
GGGGGCGGTGATGGACCTGGAGGTGTCGTGGGATAAGTCCATGGCAACTG
TGGCAGCGGGAGACACAGTGCACTTTTTCAACACAGGTGTGTGTGTGCGC
GCGCATAAAGCATATTTGCATCATTGTGATTGTGAAGTGTGAGTGTGTTT
CGTTTCGTGCGTGTTCGTGTGCATTTGTATGTTGAACGTCGGCAATGCTA
ACCGGCGGACCGGCGGAAACAGGCCGGTCTCAGCAGCCAGCAGCCGAGCA
GACAGAGCAGGTTTCGCGGAGCGTCACGTGTGTTTATGTGTGCATGTATC
GGCGACTTTTTCGTAGTCAACCGGGCGTCCTACGACCAGCCGGCAAAAGC
AACCGCGCCAAATGCAGAGATAGAAAAGTGAAGCACGTTTTCCTGCGGGT
CGGGGTCACATTGGGTTCCGCAGCGTGCTTCAGGCGGGCCTTACTGTAGT
TTGAAGGTGTCGTGTTGTGCCGGTCGTCTCTTGTGTGCCGCGACTTTTGT
TATGTGGCTTGGCTTGACAGTTGAAGTTGGGATAGCAAATTCGTAGGACT
GCGAGCCAAAGGCGGTAGATGTTCAGAGATGGCCACTTTTCAAAATAGTC
ACATGGTGCCAGCGACAGCAAATTCACGGCGGGAAGGTAAGACCCCTTTC
ACGGTGATTTGTTTTGATAGCGCGCTCCTGTTTGCTTTGCCTATTCTCGC
ATGTCGTTTGGCCGTCTTTGGTGTTTGCTCGTCTATCAGCGAAGGTCCCG
ACAGGCATGTCTACCCCAGTATTTTGTGTTTGTCGGCCATGTTTTGGTCG
CGTCTTGGGGGCCTGTGCTTGATCCTTCGCACCAGATCAAGCCGAACCAA
TCGCCCAAAAGCAAGCACACCCACACCGATCGTGACCCCCCCCCCTCCCG
AGATCCCTCTTTCTCCTCGCGCACCAAGCCGACATGTGATTGGTGCCTCC
AGATGGTGGCGAGATATGGTGCTCCCTGTCAGGAAAGGGATAAATTTGCT
CAATGGTGAAGACACCGCAAAGCGATCAAGCAAAACCGTGTACAATAGAA
CACCCCTCCCCTCTCCACCCTCTGCCCTCTGCCGTGTGGACTCGAGCTGA
CCTTTTTCCCTTCGTCATCTCCCTCGTACCCTCCCTGCCGCCCCGATTGT
CCCCCCACCCGTATTTATCCTCGCTCTTGAAGAGGACTTTACGGAGCTGA
AGCGCCACAGCATGCCCATCAACTTCCGCAACGAGGGGGGCGCCTCCCTC
CATCCCGGCGGGAAGCGATTCATAGCCGGAGGGTCGGACCTGTGGGTCCG
TGTGTTCGACTACGACACCGGGGCGGAGCTGGAGTGTCTCAAGGTGAGTA
CAGGGCAGAACGGCTAGAGGAGTGTTGAGTGTTTTCACGAGAGCGATGTT
GCGCCGCAGCACCTTTATTTTTGGCTTGTTTTCATGGGGAGACGGGTACA
TAATTGCTGCACCACCCCCTCCCCTCCTCCCGTTATTACTTTGTCTGGGG
CAGGAAGTAGCGGCAGCAGCGGCGGCATGTTTTTTTCCTTTTCAAATCCT
GATTGTTGGGATGCTTCAGCCTGGCACTGTCGTGTTTTGTGTGCTGTCGT
CTGAGGCAAGGTTGTTTGACGAAGATTAGGTTAAAACTGAAATTTGGATG
AACTCAGAGCAGGCAGGTTTTCGATGCGTTGATGCATCCGGTGCCGGGTT
TATGCAGCCGGTGCCTGGTTGATGCACAAATTCGATGGCGACCGAAATGA
CGCTTGAAAACTTGTTTCTCCTTCAACGTCTTGAGTCGAAGCTGACGGAC
AGGGACCCGCTTAATGAATCATATTGCTACAAGTGTCCAGCTCTCTGTAG
GTGAACTCCTCTTTTTGCTTGGATCCACTGAAGGGCTGCGCGTTTTGCTT
CGCCCGGGGATATGTCGCGCGTTCCCGCGATCGATCCCGTCGACGACTTT
GTACCACTCACGGTTTGATCGCCTTCTGTCCTTTTTTCACTTCCGCCCTC
ATGCGTGCATCTTCGGCTGCTAAACGCTTTGCATTCTGTTCGCTTAGCCC
ACTCTCGCTGGCCCTTTGCCCCCAAATAAATGCTGGAAACTTTGCTTTCG
CCTCGTTCTCGCTCGTTGGACTTTCGCCCGCCTAGACTACGCGCCGTATC
CCCGTGGGATAAGGCTGGAACGCTTCTTGATTTCGTTCTCGTTTCATTTT
AGTTCACTTAATTTCGCTCTCTTTTATTTCGTTCACTTGTTTTCTACCTC
TCGATTTTTCTGTCTTCACTTTGTCTTGTTGTCGCTCGGTTACCATCGTG
CCCCCGGATCGAATGAAACAAACAAAATATAGGGCCACCACGGGCCGGTG
CGGTGCTTGCGGTACGCTCCGGACGGGAAGTCGTACGCAACGGGTTCAGA
GGACGGCACTATCCGCCTGTGGCAGACCACCGCCTCCGCCGCGGCGGCAA
CCGCGGATGGTGCCGCCGGATGATCCCGCCCGATCGGTCGGTGCCGAACG
GATCCTATCAAAACCGAAAACTTTCACCAGGAGGGGGGTAAATCGGGAAC
AGAAAGAGATTGTCGAGGCGAGGTGATCAATGGCAAGCGTATTATGCTGC
TTGGTGCCACGGAGCGTTGCTTTTTTTCCTTTCTATATTTCTTTCTGCGC
CTGTGGCTCTTGTTTTTCGGCGAATGAAGGATCTGGCGCGCTTTGACCTG
GTTTGTGCGGAGAAGGGCGAGAAATTTTGCACACGCTGGGAAACGTCTCA
GCGGCGTCCGAACGCCGGGCCTGACTTTTGTCTGAATGGGGCGTGGGCCG
GCAGGCACTTTAGGCGGTGGGCGGCGGTGGAAAGAAATGACTGCCTCGCT
TTGTATTTACAAATGAGTGTTTCCCTCTCGGGCACGAAACAAATCAAATC
AAATCAAATCAAATCAATCGCGGATCGCATGCAGCAGCATTCTGCTGGGC
ACGTGTTATAGTAGTGGGTAAATGCGCATCC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig12:3477861..3488541- >mRNA_P-fluviatile_contig12.1606.1 ID=mRNA_P-fluviatile_contig12.1606.1|Name=mRNA_P-fluviatile_contig12.1606.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1968bp|location=Sequence derived from alignment at P-fluviatile_contig12:3477861..3488541- (Porterinema fluviatile SAG_2381)
ATGGCAGCGCCAGCATCCAGCACCGCACGGCAAGTCCCGATCGTTTGCCC
TGGGCACTCCCGCCCGCTGGCGGAGGTATCTTACTGTCCCGAGACTCCCG
ACGGCATCTTCCTCATCAGCGGTTGCCACGATGGCAGCGCCAGCATCCAG
CACCGCACGGCAAGTCCCGATCGTTTGCCCTGGGCACTCCCGCCCGCTGG
CGGAGGTATCTTACTGTCCCGAGACTCCCGACGGCATCTTCCTCATCAGC
GGTTGCCACGCTAAGACCCCGATGATCCGTAACGGGACGACTGGGGACTG
GATCGGGACGTTCGTGGGGCACAAGGGGGCGGTGTGGGGGGTGGCGCTGG
ACGAAACCGGCCTGCTCGCTGCGACAGCTAAGACCCCGATGATCCGTAAC
GGGACGACTGGGGACTGGATCGGGACGTTCGTGGGGCACAAGGGGGCGGT
GTGGGGGGTGGCGCTGGACGAAACCGGCCTGCTCGCTGCGACAGCGTCCG
CGGATTTCTCCGCCCGGCTGTGGGACGCCGTGACCGGTAACCAGGTCCAC
GAGTTCGTCCACAAGCACATCGTGAAGACGGTGCACTTCGCGGCCGACCG
GTCTAAGCTGGCCACGGCGGGCCACGAGGGCATCCTCAGGGTGTTCGACG
TCGCGTCCCCCGGGAGCTCTCCGACCGAGCGTCCGCGGATTTCTCCGCCC
GGCTGTGGGACGCCGTGACCGGTAACCAGGTCCACGAGTTCGTCCACAAG
CACATCGTGAAGACGGTGCACTTCGCGGCCGACCGGTCTAAGCTGGCCAC
GGCGGGCCACGAGGGCATCCTCAGGGTGTTCGACGTCGCGTCCCCCGGGA
GCTCTCCGACCGAGATCACCGTCTTCCCGGGGGGCGAAGAGACGCCAAAG
GTGTCCCGAGTGGTCTCCAAGGCGAGGTGGGGTAAGGACCCGAACACCAT
CATCACCGGGTCGGCGGACGGTTTTGTCAGGGTGTGGGACGTGCGAAGCG
GGGAGAAAGTGCAGAAGTTGCAGGTGGCGGGGGCGGTGATGGACCTGGAG
GTGTCGTGGGATAAGTCCATGGCAACTGTGGCAGCGGGAGACACAGTGCA
CTTTTTCAACACAGATCACCGTCTTCCCGGGGGGCGAAGAGACGCCAAAG
GTGTCCCGAGTGGTCTCCAAGGCGAGGTGGGGTAAGGACCCGAACACCAT
CATCACCGGGTCGGCGGACGGTTTTGTCAGGGTGTGGGACGTGCGAAGCG
GGGAGAAAGTGCAGAAGTTGCAGGTGGCGGGGGCGGTGATGGACCTGGAG
GTGTCGTGGGATAAGTCCATGGCAACTGTGGCAGCGGGAGACACAGTGCA
CTTTTTCAACACAGAGGACTTTACGGAGCTGAAGCGCCACAGCATGCCCA
TCAACTTCCGCAACGAGGGGGGCGCCTCCCTCCATCCCGGCGGGAAGCGA
TTCATAGCCGGAGGGTCGGACCTGTGGGTCCGTGTGTTCGACTACGACAC
CGGGGCGGAGCTGGAGTGTCTCAAGAGGACTTTACGGAGCTGAAGCGCCA
CAGCATGCCCATCAACTTCCGCAACGAGGGGGGCGCCTCCCTCCATCCCG
GCGGGAAGCGATTCATAGCCGGAGGGTCGGACCTGTGGGTCCGTGTGTTC
GACTACGACACCGGGGCGGAGCTGGAGTGTCTCAAGGGCCACCACGGGCC
GGTGCGGTGCTTGCGGTACGCTCCGGACGGGAAGTCGTACGCAACGGGTT
CAGAGGACGGCACTATCCGCCTGTGGCAGACCACCGCCTCCGCCGCGGCG
GCAACCGCGGATGGTGCCGCCGGATGAGGCCACCACGGGCCGGTGCGGTG
CTTGCGGTACGCTCCGGACGGGAAGTCGTACGCAACGGGTTCAGAGGACG
GCACTATCCGCCTGTGGCAGACCACCGCCTCCGCCGCGGCGGCAACCGCG
GATGGTGCCGCCGGATGA back to top
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