mRNA_P-fluviatile_contig12.1602.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1602.1
Unique NamemRNA_P-fluviatile_contig12.1602.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 556 bits (1434), Expect = 1.510e-183
Identity = 287/444 (64.64%), Postives = 346/444 (77.93%), Query Frame = 3 
Query:  198 QKTLPLQMARLCLKLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDLDGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMRLLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAKYSTWLPTSAYSDTGERSGFVSSV----EAGGGSDLLEESEMGGQRDS--------DAVPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKFDEMWMTYVRASGSQSLLDFDAFAVDWNEAVSAMEEGKSAVKPIFRKTAAYLKAHWTKHHESINMRDTMRAAEFADAAARSHLRAPVAVQGAAAAPAEPWLLRAPDAFSFP 1493
            ++ L L++A L +KLD FHA+QR+S+LILK+HGACRAY+ARLRDAFF +N+EDL  VE ALR  G S EEVE  K  DW YFLKRCRR+IP PA+LL+RFDLVN++YG L+DKKT QPL R EA EA++RLRVHI   C SD P+ ALYFE GKD  T C  +RC+RGT+DLEGYHLHMRLL    ISPRLAHLLLLE+NYRWNLRQ+++NRGLD +VGGF+DQP+LEA+QRMTS L+GKAKYS WLPTSAY DTGERSGFV S+      GGG+D + E  +GG  +S        +AVPLP+LT SAA LA MQGVQVP MPV++AAE+AKF +MW+ +V  +G Q+LLDFD+FA++WN+AVS MEEGKSAV PIFRKTA +LKA+W  HHE +NMRDT+R A   DA  R HLRAP  V G A   A+PW+L AP+ F  P
Sbjct:  692 EELLFLKVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEI-LGGAENSGIDPAFADEAVPLPELTGSAARLAKMQGVQVPHMPVTSAAEKAKFGDMWLEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSAVIPIFRKTAGHLKAYWKAHHEQVNMRDTLRPARGRDAPIREHLRAPGDVGGPAGGLAQPWILEAPEGFQMP 1134
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 3.270e-129
Identity = 205/312 (65.71%), Postives = 243/312 (77.88%), Query Frame = 3 
Query:  270 SRLILKAHGACRAYMARLRDAFFMLNSEDLDGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMRLLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAKYSTWLPTSAYSDTGERSGFVSSV----EAGGGSDLLEESEMGGQRDS-------DAVPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKFDEM 1172
            S+LILK+HGACRAY+ARLRD FF +N+EDL  VE ALR  G S EEVE  K  DW  FLKRCRR+IP PA+LLKRFD+VN++YG L+DKKT QPL R EA EA++RLRVHI   C SD P+ ALYFE GKD  T C  +RC+RGT+DLEG+HLHMRLL    ISPRLAHLLLLE+NYRWNLRQ+++NRGLD +VGGF+DQP+LEA+QRMTS L+GKAKYS WLPTSAY DTGERSGFV S+      GGG+D + E   G +  S       +AVPLP+LT SAA LA MQGVQVP MPV++AAE +KF ++
Sbjct:  318 SKLILKSHGACRAYLARLRDEFFKVNAEDLAAVEAALRQAGMSKEEVEAKKGKDWVLFLKRCRRLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPILEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSEVGGGGTDSVLEILGGAENSSMDPASVEEAVPLPELTGSAARLAKMQGVQVPHMPVTSAAENSKFGDI 629
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 7.130e-129
Identity = 201/302 (66.56%), Postives = 243/302 (80.46%), Query Frame = 3 
Query:  459 RVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMRLLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAKYSTWLPTSAYSDTGERSGFVSSV----EAGGGSDLLEESEMGGQRDS--------DAVPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKFDEMWMTYVRASGSQSLLDFDAFAVDWNEAVSAMEEGKSAVKPIFRKTAAYLKAHW 1328
            R+IP PA+LL+RFDLVN++YG L+DKKT QPL R EA EA++RLRVHI   C SD P+ ALYFE GKD  T C  +RC+RGT+DLEGYHLHMRLL    ISPRLAHLLLLE+NYRWNLRQ+++NRGLD +VGGF+DQP+LEA+QRMTS L+GKAKYS WLPTSAY DTGERSGFV S+      GGG+D + E  +GG  +S        +AVPLP+LT SAA LA MQGVQVP MPV++AAE+AKF +MW+ +V  +G Q+LLDFD+FA++WN+AVS MEEGKSAV PIFRKTA +LKA+W
Sbjct:  206 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEI-LGGAENSGIDPAFADEAVPLPELTGSAARLAKMQGVQVPHMPVTSAAEKAKFGDMWLEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSAVIPIFRKTAGHLKAYW 506
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 5.230e-76
Identity = 167/412 (40.53%), Postives = 238/412 (57.77%), Query Frame = 3 
Query:  237 KLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDL---DGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMR-LLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAK-YSTWLPTSAYSDTGERSGFVSSV--EAGGG------SDLLEESEMGGQRDSDAVPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKFDEMWMTYVRASGSQS-------LLDFDAFAVDWNEAVSAMEEGKSAVKPIFRKTAAYLKAHWTKHHESINMRDTMRAAEFADAAARSHLR 1412
            +LD FHALQR+S+L  K+HGA R +MARLRDA F++N +D+     VE+AL   G + E V   K  +W +F++ CRR++P    LL+RF+LV   + D++D K+ + LLRP AR+AV+ LR HI+ GCLSDP  + LY+        G +  RCVRGT+  EGYH ++R LLS    SP LAH +LLE NYRWN+R AV+NRGL   VG FFDQ  +E +QR T+  +  +  +  W+     +DTGE+SG   S+   A GG      SDL++E  +      +AVP+P LT SA   A M    +P  PV T AE+  F     + +   G           ++FDA+A  WN+  + +E G    + ++RKT+  L+++  K  E  N + TM       +A R HL+
Sbjct:  179 RLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTKS----AGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDVPSEPSDLVDEQGLA----QNAVPMPKLTHSAKKYAQMMHAGMPVTPVHTGAEKRNFASELNSQLYLPGQPEGRNEKYQNINFDAWAGAWNQHCAKIESGLVEFEAVYRKTSGQLQSYHQKFLERANAQFTMLPLRNQHSALRVHLQ 582
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 3.940e-71
Identity = 146/322 (45.34%), Postives = 203/322 (63.04%), Query Frame = 3 
Query:  237 KLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDL---DGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMR-LLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAK-YSTWLPTSAYSDTGERSGFVSSV--EAGGG------SDLLEESEMGGQRDSDAVPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKF 1163
            +LD FHALQR+S+L  K+HGA + +MARLRDA F++N +D+     VE+AL   G + E V   K  +W +F++ CRR++P    LL+RF+LV   + D++D K+ + LLRP AR+AV+ LR HI+ GCLSDP  + LY+ +GK+   G +  RCVRGT+  EGYH ++R LLS    SP LAH +LLE NYRWN+R AV+NRGL   VG FFDQ  +E +QR T+  +  +  +  W+     +DTGE+SG   S+   A GG      SDL++E  +      +AVP+P LT SA   A M    +P  PV T AE+ K+
Sbjct:  179 RLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSA-GITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDVPSEPSDLVDEQGLA----QNAVPMPKLTHSAKKYAQMMHAGMPVTPVHTGAEKRKY 495
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG)

HSP 1 Score: 233 bits (595), Expect = 3.210e-65
Identity = 116/234 (49.57%), Postives = 157/234 (67.09%), Query Frame = 3 
Query:  237 KLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDLDGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMR-LLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAKYSTW 935
            +LD FHA+ R+++ +LK+HGA + +MARLRDAFF+++ +DLD V  AL+  G S +E+E  K  DWA+FLK C R+IP   +LLKR+D V + + D++D KTN+PL R   ++ V+ LR HI+ GCLSD P + LYF  G+    G   YRC RGT+  EGYH HMR LL     SP L HLLLLE N+RWN+R AV+NRGL +  GGF+ Q +L+ + R +S L     Y  W
Sbjct:  436 RLDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQ-GLPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGFYSQSLLDEINRNSSGLSVHVPYLAW 668
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.760e-63
Identity = 154/423 (36.41%), Postives = 225/423 (53.19%), Query Frame = 3 
Query:  237 KLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDL-------------DGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMR-LLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAK-YSTWLPTSAYSDTGERSGFVSSVEAGGGSDLLEESEMGGQRDSDA-------------VPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKFDEMWMTYVRASGSQSLLDFDAFAVDWNEAVSAMEEGKSAVKPIFRKTAAYLKAHWTKHHESINMRDTMRAAEFADAAARSHLRAPV 1421
            +LD FH L R+SR+  K+HGA + +MARLRDA F++N +D+               VE  L   G   EEV+ L   +W++FL+  RR++P    LLKRFD V + +G  +D  + + LLRP+A +AV++LR HI+  CLSDP  MA+YF  GK+   G + YRCVRGT+D+EGYH ++R LL+    SP LA  +LLE NYRWNLR  ++NRGL  ++GG ++Q ++E++QR T+        +  W       DTGER G   S+  G       + E+ G  D+DA              P+ DLT SA + A M G  +P+  V T      +  +              +FDA+A  WN     +++G +    I+RKTA  L+ ++       N   T+        A R+ L+ PV
Sbjct:  489 RLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKH-GLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSLWGG-----ERDGEVWGIADNDAFCTDDGDSDVNGRTPMSDLTLSAKMYAKMMGESMPETRVHTWGRMQLYQRV--------------NFDAWAGKWNADCDQVQQGLAPFAKIYRKTAKQLEEYYGVLQRQANDTLTLLPRRNTANALRADLQQPV 891
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 9.380e-61
Identity = 111/224 (49.55%), Postives = 154/224 (68.75%), Query Frame = 3 
Query:  237 KLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDLDGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMR-LLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSM 905
            +LD FHAL RLSR I K HGA R  MARLRDA F++N +D+  +E+ L   G S  +V+  K  DW+YFL++CRR++PPP++LLKRFD V   +G+ +D  + + LLRP++ +AV  LR HI  GCLSDP  +A+Y+  GK    G   YRCVRGT+D+EGYH ++R LL+    SP LA  +LLE N+RWNL+  V+NRGL   +G  ++Q ++E +QR T +
Sbjct:  546 RLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKT-TDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRATEL 768
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.670e-49
Identity = 107/260 (41.15%), Postives = 154/260 (59.23%), Query Frame = 3 
Query:  216 QMARLCLKLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDLDGVEEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMRLLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLF-GKAKYSTWLPTSAYSDTGERSGFVSSV 992
            +   L ++LD FHALQR+SRL  K+HGA + +MARLRDA F++N +D+  VE+AL   G + E V   K  +W YFL+ CRR++P    LL+RF+ V + + +++D K+ + L+RP+A +AV +LR HI+  CLSDP  + LY+ TG++   G +  RCVRGT+                           E NYRWN+R AV+NRGL   VG FFDQ  +E +QR TS  +     +  W+     +DTGE+SG   S+
Sbjct:  494 EQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQN-AAGITTRRCVRGTN-------------------------YTEFNYRWNIRMAVKNRGLPREVGEFFDQFEIEIIQRETSSWYPDNPLFPEWISALDAADTGEKSGLSQSL 727
[Close]
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.010e-48
Identity = 117/315 (37.14%), Postives = 175/315 (55.56%), Query Frame = 3 
Query:  513 IYGDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPVTGCSRYRCVRGTSDLEGYHLHMR-LLSDCVISPRLAHLLLLEHNYRWNLRQAVRNRGLDTSVGGFFDQPVLEAVQRMTSMLF-GKAKYSTWLPTSAYSDTGERSGFVSSV--EAGGGS---DLLEESEMGGQRDSDAVPLPDLTQSAAVLANMQGVQVPQMPVSTAAERAKFDEMWMTYVRASGSQ-------SLLDFDAFAVDWNEAVSAMEEGKSAVKPIFRKTAAYLKAHWTKHH-ESINMRDTMRAAEFADAAARSHLR 1412
            ++G+++D K+ + LLR +A + V  L  HI+ GCLSDP  + LY+ TG++   G + +RCVRGT+  EGYH ++R LLS    SP LAH +LLE N+RWN+R AV+NRGL   VG FFDQ   E +QR T+  +     +  W+     +DTGERSG   S+   A GG    DL++E          A+P+P LT SA   A    + +P  PV T AER KF     +Y+   G           ++FD ++ +WN   + +E G    + ++RKT+  L++++  +  E  N R TM A +  +   R+ L+
Sbjct:    1 MFGNVVDAKSGEKLLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQN-AAGITTHRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPDNPLFPEWVSALDVADTGERSGLSQSMWGPASGGDAPGDLVDEQAS----PQHAIPMPKLTHSAKKYAETMNIGMPCTPVHTGAERRKFTSEMNSYLYVPGEARGRRQIYQTINFDRWSHEWNNHCAQIESGAVEWEAVYRKTSHQLESYYKNNVVERANSRVTMMAVQSMNNYLRARLQ 310
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE1.510e-18364.643'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KEU8_9PHAE3.270e-12965.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD89_9PHAE7.130e-12966.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE5.230e-7640.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPK9_9PHAE3.940e-7145.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y2A9B5_9FUNG3.210e-6549.573'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE1.760e-6336.413'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI9.380e-6149.553'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV1_ECTSI1.670e-4941.15Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
A0A6H5K9U3_9PHAE1.010e-4837.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3445861..3447873 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.2
Seed ortholog evalue1.2e-55
Seed eggNOG ortholog2880.D7G3Q9
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categorymitochondrion
Exons4
Model size1516
Cds size1296
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1602.1prot_P-fluviatile_contig12.1602.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 3446079..3447873 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815533.274095-UTR-P-fluviatile_contig12:3445860..34460781622815533.274095-UTR-P-fluviatile_contig12:3445860..3446078Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3445861..3446078 +
1693562163.8335323-UTR-P-fluviatile_contig12:3445860..34460781693562163.8335323-UTR-P-fluviatile_contig12:3445860..3446078Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3445861..3446078 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815533.288301-CDS-P-fluviatile_contig12:3446078..34463201622815533.288301-CDS-P-fluviatile_contig12:3446078..3446320Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3446079..3446320 +
1693562163.8449893-CDS-P-fluviatile_contig12:3446078..34463201693562163.8449893-CDS-P-fluviatile_contig12:3446078..3446320Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3446079..3446320 +
1622815533.3017395-CDS-P-fluviatile_contig12:3446554..34469841622815533.3017395-CDS-P-fluviatile_contig12:3446554..3446984Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3446555..3446984 +
1693562163.8535776-CDS-P-fluviatile_contig12:3446554..34469841693562163.8535776-CDS-P-fluviatile_contig12:3446554..3446984Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3446555..3446984 +
1622815533.3144217-CDS-P-fluviatile_contig12:3447125..34475681622815533.3144217-CDS-P-fluviatile_contig12:3447125..3447568Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3447126..3447568 +
1693562164.0959592-CDS-P-fluviatile_contig12:3447125..34475681693562164.0959592-CDS-P-fluviatile_contig12:3447125..3447568Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3447126..3447568 +
1622815533.3249936-CDS-P-fluviatile_contig12:3447692..34478731622815533.3249936-CDS-P-fluviatile_contig12:3447692..3447873Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3447693..3447873 +
1693562164.1080484-CDS-P-fluviatile_contig12:3447692..34478731693562164.1080484-CDS-P-fluviatile_contig12:3447692..3447873Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3447693..3447873 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1602.1

>prot_P-fluviatile_contig12.1602.1 ID=prot_P-fluviatile_contig12.1602.1|Name=mRNA_P-fluviatile_contig12.1602.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=432bp
MARLCLKLDAFHALQRLSRLILKAHGACRAYMARLRDAFFMLNSEDLDGV
EEALRLLGKSFEEVETLKRTDWAYFLKRCRRVIPPPADLLKRFDLVNDIY
GDLMDKKTNQPLLRPEAREAVQRLRVHIKLGCLSDPPSMALYFETGKDPV
TGCSRYRCVRGTSDLEGYHLHMRLLSDCVISPRLAHLLLLEHNYRWNLRQ
AVRNRGLDTSVGGFFDQPVLEAVQRMTSMLFGKAKYSTWLPTSAYSDTGE
RSGFVSSVEAGGGSDLLEESEMGGQRDSDAVPLPDLTQSAAVLANMQGVQ
VPQMPVSTAAERAKFDEMWMTYVRASGSQSLLDFDAFAVDWNEAVSAMEE
GKSAVKPIFRKTAAYLKAHWTKHHESINMRDTMRAAEFADAAARSHLRAP
VAVQGAAAAPAEPWLLRAPDAFSFPAPVAEVG
back to top

mRNA from alignment at P-fluviatile_contig12:3445861..3447873+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1602.1 ID=mRNA_P-fluviatile_contig12.1602.1|Name=mRNA_P-fluviatile_contig12.1602.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2013bp|location=Sequence derived from alignment at P-fluviatile_contig12:3445861..3447873+ (Porterinema fluviatile SAG_2381)
AGCATGCACTACTCGAGGCAAGACCAACATGTTGTGTGTTCGTGTTGATC
GCTTTTGAAACCCCATGTATGCTTCGTCCTGTCTACACTCTTCGTCTGTT
CCGTTTTCGAATCCTTGGCTCATGATTCGGGCCATCCTCGCGTGGTGTTG
TGGGCTCTTCGTTCCAGCACCTTTCGTCGCGCCTCTGAACAACATCTCAA
AAAACGCTACCTCTGCAGATGGCCCGGCTGTGCCTCAAGCTAGATGCTTT
TCACGCACTTCAGCGGCTGAGTAGACTAATCCTCAAGGCTCACGGTGCAT
GTCGTGCGTACATGGCGCGCCTGAGAGACGCATTTTTTATGCTGAACTCT
GAGGATCTGGACGGCGTGGAAGAAGCCCTACGCCTCTTGGGCAAGAGCTT
CGAAGAAGTCGAAACGTTGAAGAGAACTGACTGGGCGTACTTCCTCAAGC
GGTGCCGCAGGTGAGTCGAGGTGTTTGAGGAGATGCTGGTTGATATTTGT
TGTGCGGAAAGTACATCGTTTCTGGATCGATGCGTGCACTGATGGATTTT
TACTTGACATATGTAGAGTGTGCTTGCATGTCGGTCGAGCTGTTTGTCGG
TCGCGTCGAGACCAAAGCAACAATGGCGAGGGAATCTGACCGTGAGTACT
TTTTCATCATCCTTCCGTCCGGGCGGTGCATGCCCCATCCTCAGGGTGAT
TCCGCCACCCGCCGACCTTCTAAAGCGTTTCGATTTGGTCAACGACATCT
ACGGCGACCTCATGGACAAGAAAACCAACCAGCCTTTGCTTCGGCCAGAA
GCGCGAGAGGCCGTCCAGCGACTTCGCGTCCACATCAAGCTCGGTTGTTT
GAGTGACCCGCCAAGCATGGCTCTGTATTTCGAGACTGGCAAGGATCCTG
TGACAGGCTGCTCGCGGTATCGCTGTGTTCGCGGCACCAGCGACCTGGAG
GGATATCACCTTCACATGCGCTTGCTTTCGGACTGTGTCATTTCGCCCAG
GCTTGCTCATCTCCTCCTCCTCGAGCACAATTACAGGTGGAACCTGCGCC
AGGCCGTTAGGAACCGTGGCCTTGACACCTCTGTGGGGGGATTCTTCGAC
CAGCCGGTGCTCGAAGCGGTGCAGGTCGGTCTTCCTCATAAAACGTACAG
ACATCCACTTGCAGGACCTCAGGAAGCAATGAGCTTTTTCGCACAAAGGT
CGCCTTCTCTGTTCAAGTCCCTCTCTCTTTCATGCGGCGGTAAACTATGC
GAATTGTTGTGGCAGAGAATGACGTCGATGCTGTTCGGCAAGGCCAAGTA
CTCAACCTGGTTACCGACTAGCGCGTACAGCGACACGGGGGAACGCAGCG
GGTTCGTCTCGAGTGTTGAGGCGGGGGGCGGGTCAGATCTTCTGGAAGAA
TCTGAAATGGGCGGACAGCGAGACAGCGACGCTGTTCCGCTCCCGGACTT
AACGCAGTCAGCAGCTGTGCTCGCCAACATGCAGGGAGTACAGGTACCCC
AGATGCCTGTCAGCACTGCTGCTGAGCGCGCCAAGTTTGATGAGATGTGG
ATGACGTACGTGCGTGCAAGCGGATCGCAGTCCCTTCTCGACTTCGACGC
CTTTGCCGTCGACTGGAACGAAGCGGTGTCTGCCATGGAAGAGGGGAAGA
GTGCGGTCAAGCCCATCTTCAGGAAGACGGCTGCATACTTGAAGGCGCAC
TGGACCAAGTGAGGAAAAGTCGGGCTATATTCCACTTTTTATGACTTTAT
CTCATCTGTTCGTCCCGGTTGACAGAGTTCCTCACCATTTGATAAACGGT
GATCTCTATTCAACGACGATACCGCGTGGCAGGCACCACGAATCCATCAA
TATGAGGGACACCATGCGAGCTGCTGAGTTCGCCGATGCGGCCGCTCGGA
GCCACCTTCGTGCACCCGTGGCGGTGCAAGGCGCCGCAGCCGCCCCGGCA
GAGCCCTGGTTACTACGAGCGCCCGATGCCTTCTCCTTTCCTGCTCCGGT
GGCCGAAGTGGGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig12:3445861..3447873+

>mRNA_P-fluviatile_contig12.1602.1 ID=mRNA_P-fluviatile_contig12.1602.1|Name=mRNA_P-fluviatile_contig12.1602.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2592bp|location=Sequence derived from alignment at P-fluviatile_contig12:3445861..3447873+ (Porterinema fluviatile SAG_2381)
ATGGCCCGGCTGTGCCTCAAGCTAGATGCTTTTCACGCACTTCAGCGGCT
GAGTAGACTAATCCTCAAGGCTCACGGTGCATGTCGTGCGTACATGGCGC
GCCTGAGAGACGCATTTTTTATGCTGAACTCTGAGGATCTGGACGGCGTG
GAAGAAGCCCTACGCCTCTTGGGCAAGAGCTTCGAAGAAGTCGAAACGTT
GAAGAGAACTGACTGGGCGTACTTCCTCAAGCGGTGCCGCAGATGGCCCG
GCTGTGCCTCAAGCTAGATGCTTTTCACGCACTTCAGCGGCTGAGTAGAC
TAATCCTCAAGGCTCACGGTGCATGTCGTGCGTACATGGCGCGCCTGAGA
GACGCATTTTTTATGCTGAACTCTGAGGATCTGGACGGCGTGGAAGAAGC
CCTACGCCTCTTGGGCAAGAGCTTCGAAGAAGTCGAAACGTTGAAGAGAA
CTGACTGGGCGTACTTCCTCAAGCGGTGCCGCAGGGTGATTCCGCCACCC
GCCGACCTTCTAAAGCGTTTCGATTTGGTCAACGACATCTACGGCGACCT
CATGGACAAGAAAACCAACCAGCCTTTGCTTCGGCCAGAAGCGCGAGAGG
CCGTCCAGCGACTTCGCGTCCACATCAAGCTCGGTTGTTTGAGTGACCCG
CCAAGCATGGCTCTGTATTTCGAGACTGGCAAGGATCCTGTGACAGGCTG
CTCGCGGTATCGCTGTGTTCGCGGCACCAGCGACCTGGAGGGATATCACC
TTCACATGCGCTTGCTTTCGGACTGTGTCATTTCGCCCAGGCTTGCTCAT
CTCCTCCTCCTCGAGCACAATTACAGGTGGAACCTGCGCCAGGCCGTTAG
GAACCGTGGCCTTGACACCTCTGTGGGGGGATTCTTCGACCAGCCGGTGC
TCGAAGCGGTGCAGGGTGATTCCGCCACCCGCCGACCTTCTAAAGCGTTT
CGATTTGGTCAACGACATCTACGGCGACCTCATGGACAAGAAAACCAACC
AGCCTTTGCTTCGGCCAGAAGCGCGAGAGGCCGTCCAGCGACTTCGCGTC
CACATCAAGCTCGGTTGTTTGAGTGACCCGCCAAGCATGGCTCTGTATTT
CGAGACTGGCAAGGATCCTGTGACAGGCTGCTCGCGGTATCGCTGTGTTC
GCGGCACCAGCGACCTGGAGGGATATCACCTTCACATGCGCTTGCTTTCG
GACTGTGTCATTTCGCCCAGGCTTGCTCATCTCCTCCTCCTCGAGCACAA
TTACAGGTGGAACCTGCGCCAGGCCGTTAGGAACCGTGGCCTTGACACCT
CTGTGGGGGGATTCTTCGACCAGCCGGTGCTCGAAGCGGTGCAGAGAATG
ACGTCGATGCTGTTCGGCAAGGCCAAGTACTCAACCTGGTTACCGACTAG
CGCGTACAGCGACACGGGGGAACGCAGCGGGTTCGTCTCGAGTGTTGAGG
CGGGGGGCGGGTCAGATCTTCTGGAAGAATCTGAAATGGGCGGACAGCGA
GACAGCGACGCTGTTCCGCTCCCGGACTTAACGCAGTCAGCAGCTGTGCT
CGCCAACATGCAGGGAGTACAGGTACCCCAGATGCCTGTCAGCACTGCTG
CTGAGCGCGCCAAGTTTGATGAGATGTGGATGACGTACGTGCGTGCAAGC
GGATCGCAGTCCCTTCTCGACTTCGACGCCTTTGCCGTCGACTGGAACGA
AGCGGTGTCTGCCATGGAAGAGGGGAAGAGTGCGGTCAAGCCCATCTTCA
GGAAGACGGCTGCATACTTGAAGGCGCACTGGACCAAAGAATGACGTCGA
TGCTGTTCGGCAAGGCCAAGTACTCAACCTGGTTACCGACTAGCGCGTAC
AGCGACACGGGGGAACGCAGCGGGTTCGTCTCGAGTGTTGAGGCGGGGGG
CGGGTCAGATCTTCTGGAAGAATCTGAAATGGGCGGACAGCGAGACAGCG
ACGCTGTTCCGCTCCCGGACTTAACGCAGTCAGCAGCTGTGCTCGCCAAC
ATGCAGGGAGTACAGGTACCCCAGATGCCTGTCAGCACTGCTGCTGAGCG
CGCCAAGTTTGATGAGATGTGGATGACGTACGTGCGTGCAAGCGGATCGC
AGTCCCTTCTCGACTTCGACGCCTTTGCCGTCGACTGGAACGAAGCGGTG
TCTGCCATGGAAGAGGGGAAGAGTGCGGTCAAGCCCATCTTCAGGAAGAC
GGCTGCATACTTGAAGGCGCACTGGACCAAGCACCACGAATCCATCAATA
TGAGGGACACCATGCGAGCTGCTGAGTTCGCCGATGCGGCCGCTCGGAGC
CACCTTCGTGCACCCGTGGCGGTGCAAGGCGCCGCAGCCGCCCCGGCAGA
GCCCTGGTTACTACGAGCGCCCGATGCCTTCTCCTTTCCTGCTCCGGTGG
CCGAAGTGGGAGCACCACGAATCCATCAATATGAGGGACACCATGCGAGC
TGCTGAGTTCGCCGATGCGGCCGCTCGGAGCCACCTTCGTGCACCCGTGG
CGGTGCAAGGCGCCGCAGCCGCCCCGGCAGAGCCCTGGTTACTACGAGCG
CCCGATGCCTTCTCCTTTCCTGCTCCGGTGGCCGAAGTGGGA
back to top