mRNA_P-fluviatile_contig12.1593.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: D7G247_ECTSI (NB-ARC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G247_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.780e-46 Identity = 82/119 (68.91%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 1 LEDLASRVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTS--DGCSSETPRVV-GLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPVGQGAKDRLPSLTFDLAGMVYETVLS 348
+ DLASRVK PSG PR+RDWYV+R+ VA AC HL++ SS S S+E RVV GL GP G GKSTVASMVI R+DVRASFHKGVLWLPVGQGAKDRLPS DLAGMV++T LS
Sbjct: 1 MADLASRVKIPSGTPRVRDWYVQRRAEVAHACDHLEITSSSRDSFERNNSAENQRVVFGLAGPGGAGKSTVASMVITREDVRASFHKGVLWLPVGQGAKDRLPSPMLDLAGMVHKTALS 119
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.790e-32 Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 13 ASRVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSSETPRVVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPVGQGAKDRLPSLTFDLAGMVYETVL 345
A V PSGAPRI +W+VERK VA+AC L + S G S+ E PRVVG++GP G+GKST+ASMVIAR+DVR F+KGVLWLPVG+GAK LP L LA MVYETVL
Sbjct: 119 AGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGS--GKSEFF--EMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVL 225
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 125 bits (313), Expect = 6.190e-31 Identity = 70/112 (62.50%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 19 RVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSS---ETPRVVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPVGQGAKDRLPSLTFDLAGMVYETVL 345
RV PSGAP IRDWYVER V AQ C HL + GTS+G S E PR+VGL GP G GKSTVASMV+ + DV+A F VLWL VG+GAKDRLP+L F+LA V ETVL
Sbjct: 172 RVNIPSGAPSIRDWYVERVKVEAQICHHLGI----GTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVL 279
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 124 bits (312), Expect = 7.100e-31 Identity = 69/112 (61.61%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 19 RVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSS---ETPRVVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPVGQGAKDRLPSLTFDLAGMVYETVL 345
RV PSGAP IRDWYVER V Q C HL + GTS+G S E PR+VGL GP G GKSTVASMV+ + DV+A F VLWL VG+GAKDRLP+L F+LA V ETVL
Sbjct: 6 RVNIPSGAPSIRDWYVERVGVATQICHHLGI----GTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVL 113
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: D7FQM2_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM2_ECTSI) HSP 1 Score: 121 bits (304), Expect = 6.410e-30 Identity = 68/112 (60.71%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 19 RVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSS---ETPRVVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPVGQGAKDRLPSLTFDLAGMVYETVL 345
RV PSGAP IRDWYVE V Q C HL + GTS+G S E PR+VGL GP G GKSTVASMV+ + DV+A F VLWL VG+GAKDRLP+L F+LA V ETVL
Sbjct: 6 RVNIPSGAPSIRDWYVEWVGVATQICHHLGI----GTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVL 113
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 120 bits (300), Expect = 3.650e-29 Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 10 LASRVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSSETPRVVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPV-GQGAKDRLPSLTFDLAGMVYETVL 345
LAS+VK PS APRI+ WY+ R V C L V S D E PR+VGL GP+G GKSTV S+V+AR+DVRA F G++WLPV G+GA+ RLP L LA MVYET+L
Sbjct: 235 LASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETIL 347
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.390e-24 Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 10 LASRVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSSETPRVVGLTGPSGTGKSTVASMVIARKDVRASF-HKGVLWLPVGQGAKDRLPSLTFDLAGMVYETVLS 348
L S+ K P+ AP ++DW+++R+ VVA C L V G+ +S P VVG+ GPSG GKST+ASM+IAR DVR F K ++WLPVGQGA+DRL + + LA MV+E V++
Sbjct: 298 LYSKAKGPAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSR---ASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVN 408
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 104 bits (260), Expect = 8.850e-24 Identity = 66/117 (56.41%), Postives = 78/117 (66.67%), Query Frame = 1
Query: 1 LEDLASRVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSSETP--RVVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPVGQGA-KDRLPSLTFDLAGMVYETV 342
+ DLAS V+ P+ APRIRD +VER V++Q C S LG D ++ +VVGL G G+GKSTVASMVI R+DVRA F GVLWL VGQ A +DRL L LAGMVYETV
Sbjct: 17 VADLASTVRIPTTAPRIRDRFVERGEVISQVC------SLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETV 127
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 100 bits (248), Expect = 3.730e-22 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 1
Query: 25 KDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSSETPRVVGLTGPSGTGKSTVASMVIARKDVRASF-HKGVLWLPVGQGAKDRLPSLTFDLAGMVYE 336
K P+ AP ++DW+++R+ VVA C L V + G S +S P VVG+ GPSG GKST+ASM++AR DVR F KGV+WL VGQGA+DRL + + LA MV+E
Sbjct: 259 KSPAEAPLLQDWFIQREPVVAAICDRLGV-NDRGRSR--ASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHE 360
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.520e-15 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 160 VVGLTGPSGTGKSTVASMVIARKDVRASFHKGVLWLPV-GQGAKDRLPSLTFDLAGMVYETVL 345
+VGL GP+G GKSTV S+V+AR+DVRA F G++WLPV G+GA+ RLP L LA MVYETVL
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVL 63 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1593.1 >prot_P-fluviatile_contig12.1593.1 ID=prot_P-fluviatile_contig12.1593.1|Name=mRNA_P-fluviatile_contig12.1593.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=116bp LEDLASRVKDPSGAPRIRDWYVERKVVVAQACQHLDVASSLGTSDGCSSEback to top mRNA from alignment at P-fluviatile_contig12:3414897..3415244- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1593.1 ID=mRNA_P-fluviatile_contig12.1593.1|Name=mRNA_P-fluviatile_contig12.1593.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=348bp|location=Sequence derived from alignment at P-fluviatile_contig12:3414897..3415244- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3414897..3415244- >mRNA_P-fluviatile_contig12.1593.1 ID=mRNA_P-fluviatile_contig12.1593.1|Name=mRNA_P-fluviatile_contig12.1593.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=696bp|location=Sequence derived from alignment at P-fluviatile_contig12:3414897..3415244- (Porterinema fluviatile SAG_2381)back to top |