mRNA_P-fluviatile_contig12.1574.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: D7G924_ECTSI (UPF0020 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G924_ECTSI) HSP 1 Score: 613 bits (1582), Expect = 9.930e-212 Identity = 340/560 (60.71%), Postives = 395/560 (70.54%), Query Frame = 2
Query: 32 RSKAVLVNARSLRLCAFRGRSRHTSGFEPFETFELAPQELIASVQSV--GSGRHAFQLEPTQGSQAFRWIQSHAEDAELMEAARRREWRNGKELEIRNLENGCVLLHGLFEVWGHGRDKEEAARDATRSGRFLGYVG-VSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIG--YGVEA---QANRQSLENLLRDFEALGLDPPMLVKADVGDKNSPVRRPEYYDAIITDPPYNIKAKVVTT-----IDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPLRGAEARLDKLPTSLVDRLRESDHDDSRGRDYLSLVYATKQRMTSPNMCRWLLVLEK 1672
R A+ + RSLRL AFRGRSRHTSGF P+E FELAPQELIAS + +L T GS F+W+ S +DAE+ EAA R CVLLHGLFEVWGHGR++E+A RDA +SGRFL + G SWSLG T YGRSNL++ E+QALAGGPVE FLS+ LKG R + NSDIR+RIIED CPPPA NLP DVR+RAE A+ AA RE FYICRELQ+GAAV GGTV+ T CGRRPTRGVLG LAL +RRCRGPTAIEPEVAL+MANLAK RPGS VLDPFCGSCSLLLPAAHMGA+TWG+DV GPATA SE A +G G E QA+R+ E + +DF+ALG+ P LV ADVGD+ SPVRRPE+YDAI+TDPPYNIKAKVVTT + E G+ + A DS A A EWKA GARA A A DLVG+V+W+L++LAR SLKPGGRLCFFLPLRGAEARLD+LPT L++++ + D R L++VY TKQRMTSPNMCRWL+VLEK
Sbjct: 10 RINALSASTRSLRLVAFRGRSRHTSGFGPYEKFELAPQELIASTTQTKRSEQQDMLRLRQTDGSDVFQWVDSRMDDAEIAEAASR-----------------CVLLHGLFEVWGHGRNREDAIRDAFKSGRFLQHAGNASWSLGVTRYGRSNLNKEEQQALAGGPVETFLSSFLKGPRIELVNSDIRVRIIEDLCPPPAENLPRDVRERAE-----------ASAAARRRRENTFYICRELQLGAAVGVGGTVMATGCGRRPTRGVLGALALNRRRCRGPTAIEPEVALIMANLAKVRPGSRVLDPFCGSCSLLLPAAHMGAKTWGSDVSGPATA----------SEEAGALVGGDTGAEGGVRQADREDFEQIYQDFQALGVAAPTLVAADVGDEESPVRRPEFYDAIVTDPPYNIKAKVVTTSLATKTSGRHEEAGSVLPAAGIDSTAHAASE-AGSEWKAGGGARAEASAKDLVGKVIWSLLALARSSLKPGGRLCFFLPLRGAEARLDRLPTGLLEKMSQGDLAGDPAR--LAVVYTTKQRMTSPNMCRWLIVLEK 528
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A1Y1HQE7_KLENI (Putative RNA methyltransferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQE7_KLENI) HSP 1 Score: 116 bits (291), Expect = 7.100e-24 Identity = 121/416 (29.09%), Postives = 174/416 (41.83%), Query Frame = 2
Query: 335 VLLHGLFEVWGHGRDKEEA-----ARDATRSGRFLGYVGVSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP--EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPLRGAEARLDKLPTSLVDRL 1558
+LL GL+EVWG G EE A R FLG VS+ + +G++ + Q + E F KG M + D+R II+ LP ++++ + RE +GA+ RGVLGK LKKRR GPT+++ E++ +MAN ARPGS V DPFCG+ S L+PAAH GA T GAD+ + V R H + +FE GL P+ +++AD + P R E + AI+ DPPY ++A R+ G LL+ P V ++ D + A + E + L+ LA +L GGRL FF+P + +LPT + RL
Sbjct: 65 ILLKGLYEVWGSGHTVEEVEAGIRAYPEERKAPFLG-EDVSFKVVVDGFGKAFTMEEQLQKM-----ERFAFIPWKGP-VRMKDPDVRFWIIDSLGGYDPLGLPP-------------------------LQDRIIFFGRE--IGAS----------------ERGVLGKYDLKKRRYIGPTSMDAEISFLMANQGLARPGSLVFDPFCGTGSCLIPAAHFGALTLGADI-----------DIRVVKYGKRGH---------------TIWSNFEQYGLTAPVAILRAD--NHQQPWRNDIRETFHAIVCDPPYGVRAG--------GRKSGGKKLLSGKAEPYVLTEQQKDGHIPST--------APYTLAECLHDLLDLAARTLVIGGRLVFFVPCSVPDYDPKQLPTHPILRL 386
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A1J7IK81_LUPAN (UPF0020 domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7IK81_LUPAN) HSP 1 Score: 103 bits (257), Expect = 1.320e-19 Identity = 127/412 (30.83%), Postives = 175/412 (42.48%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEAARDATRSGRFLGYVG----------VSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANN-LPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPL 1504
RN+ N +L+ G++E+WG G EE RD+ L YVG ++ + S+G++ +S E+ L ++ F KG+ + I+ D ANN LP V+KR F+ RE VGAA R ++ LK R GPTA++ E+A +MAN A A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G + N+ +F+ GL P+ L++A D N P RP E +DAII DPPY ++A R+ G LL +P V D DK R G A LV E V L+ LA L GGRL FF P+
Sbjct: 68 RNIANRSILVKGMYELWGEGGSYEEL-RDSV-----LSYVGDGKLPCLESGSTFRITVDSFGKA-ISLKEQMEL----IQGFSYIPFKGQVKLKDPDHNFCLIVVDNNNDGANNGLPPVVQKR-------------------------FFFGRE--VGAA----------------DRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATPGKLVYDPFVGTGSILVAAAHFGAMTMGADI-----------DIRVVRD------GRGPDC--------NVWSNFKQYGLPMPVALLRA---DNNLPPWRPGLKEVFDAIICDPPYGVRAG--------GRKSGGRKLLKGTVAPYVVPD---DK----RTGHIPSTGAYCLV-ECVHDLLDLAARMLIMGGRLVFFYPV 381
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A2G5DVY5_AQUCA (UPF0020 domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DVY5_AQUCA) HSP 1 Score: 102 bits (254), Expect = 2.930e-19 Identity = 121/404 (29.95%), Postives = 167/404 (41.34%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEA--ARDATRSGRFLGYVG--VSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPMLVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPL 1504
RN+ N +L+ G++E+WG G EE A A R L Y+ ++ + S+G+ + + + G F KGR ++ N D + +IE N LP V++R + RE VGAA R +L LK R+ GPTA++ E+A +MAN A A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G E N+ +F+ GL PM V D N P RP E +DAII DPPY ++A R+ G LL P D DK R+G + A + E + L LA L GGRL FF P+
Sbjct: 62 RNIANRSILVKGMYELWGEGCSYEELEEAIKAYPDDRKLPYLTSETTFRIIVDSFGKVISFEEQNKRIRG-----FTYIPFKGR-VNLKNPDHKFWLIETDEYGSNNGLPPVVQRR-------------------------LFFGRE--VGAA----------------DRKLLPTYQLKSRKYLGPTAMDAEMAFLMANQALATPGKLVYDPFVGTGSILVAAAHFGAMTMGADI-----------DIRVVRD------GRGPEC--------NVWSNFKQYGL--PMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYGVRAG--------GRKSGGRKLLKGVIDPYTVPD---DK----RLG-HIPSTAPYSLAECIHDLFELAARMLVMGGRLVFFYPV 373
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A835I9D1_9MAGN (UPF0020 domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835I9D1_9MAGN) HSP 1 Score: 102 bits (254), Expect = 2.960e-19 Identity = 116/412 (28.16%), Postives = 168/412 (40.78%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEA--ARDATRSGRFLGYV--GVSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPMLVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPLRGAEARLD 1528
+++ N +L+ G++E+WG G EE A A R L Y+ G ++ + S+G++ + + + + G F KGR ++ N + + +IE N LP V++R + RE VGAA R +L LK R+ GPTA++ E+A +MAN A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G E N+ +FE GL PM V D N P RP E +DAII DPPY ++A + G +L D V D+ D + A + E + L LA L GGRL FF P+ + D
Sbjct: 64 KSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISFQEQNERIYG-----FKYIPFKGR-VNLKNPEHKFWLIETDEYGSNNGLPPVVQRR-------------------------IFFGRE--VGAA----------------DRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAMTMGADI-----------DIRVVRD------GRGPEC--------NVWSNFEQYGL--PMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYGVRAGG-------RKSGGRKLLKGTVDPYTVPDDKRLD---------HIPSTAPYSLAECIHDLFELAARMLVMGGRLVFFYPVLREDGSTD 383
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A6J1ICG5_CUCMA (tRNA (Guanine(10)-N2)-methyltransferase homolog n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1ICG5_CUCMA) HSP 1 Score: 102 bits (253), Expect = 3.980e-19 Identity = 119/418 (28.47%), Postives = 176/418 (42.11%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEAARDAT-----RSGRFLGYVGVSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLP-LRGAEARLDKLP 1537
RN+ N +L+ G++E+WG G D EE R +L G ++ + S+G++ + + + + G F KG+ ++ N D + ++E N LP P ++ +F+ +VG A R ++ LK R GPTA++ E+A +MAN A A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G + N+ +F+ GL PP+ L++A D N P RP E +DAII DPPY ++A R+ G LL +P D DK R A LV E V L++LA L GGRL FF P LR + ++ P
Sbjct: 63 RNIANRSILVKGMYELWGVGSDYEELQESIKTFPEERKSPYL-LQGSTFKISVESFGKAISFQEQNERIQGLAYIPF-----KGQ-VNLRNPDHKFSLMEAADYGLNNGLP------------------------PVAQRTIFF---GREVGGA----------------DRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATPGKLVYDPFVGTGSILVGAAHFGAMTMGADI-----------DIRVVRD------GRGPDC--------NVWSNFKQYGLPPPIALLRA---DNNLPPWRPGLKEIFDAIICDPPYGVRAG--------GRKSGGRKLLKGTVAPYTVPD---DK----RTDHIPSTAAYSLV-ECVHDLLNLAAKMLVMGGRLVFFYPVLREEDCVFNQFP 386
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A118K0S5_CYNCS (DNA methylase, N-6 adenine-specific, conserved site-containing protein n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118K0S5_CYNCS) HSP 1 Score: 102 bits (253), Expect = 4.040e-19 Identity = 120/405 (29.63%), Postives = 171/405 (42.22%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEA--ARDATRSGRFLGYV--GVSWSLGFTSYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPL 1504
RN+ N +L+ GL+E+WG G EE A ++ R L Y+ ++ + S+G++ + + + G F KGR + N + + +IE N LP V +K + RE VGAA R +L LK R GPTA++ EVA +MAN A+A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G + N+ +F+ GL P+ L++A D N P RP E +DAII DPPY ++A R+ G LL P + D DK R G + A + E V L+ LA L GGRL +F P+
Sbjct: 66 RNIANRSILVKGLYEIWGEGSSYEELKEAINSYPDDRKLPYLTSDSTFRIIVDSFGKAISFKDQTARIQGMSYIPF-----KGR-VELRNPEHKFWLIETDDYEANNGLPPVV-------------------------DKTIFFGRE--VGAA----------------DRKLLPTYQLKSRTYLGPTAMDAEVAFLMANQAQAMPGKLVYDPFVGTGSILVAAAHFGAMTMGADI-----------DIRVVRD------GRGPDC--------NVWSNFKQYGLQMPVSLLRA---DNNLPPWRPGLKEVFDAIICDPPYGVRAG--------GRKSGGRKLLKGVVGPYIVPD---DK----RTG-HIPSTAAYCLAECVHDLLDLAAKMLVMGGRLVYFYPV 377
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A2Z6N4P2_TRISU (UPF0020 domain-containing protein n=9 Tax=IRL clade TaxID=2233839 RepID=A0A2Z6N4P2_TRISU) HSP 1 Score: 102 bits (253), Expect = 4.040e-19 Identity = 130/464 (28.02%), Postives = 192/464 (41.38%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEAARDATR--SGRFLGYVGVSWSLGFT--SYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIE-DTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPLRGAEARLDKLPTSLVDRLRESD--HDDSRGRDYLSLVYATKQRMTSPNMCRWLLVLEK 1672
RN+ N +L+ G++E+WG G EE R L Y+ + + T ++G+ +S E++ L ++ F KG+ ++ N D +IE D C N LP V +K + RE+ GG+ R ++ LK R GPTA++ E+A +MAN A A PG V DPF G+ S+L+ AAH GA T GAD+ ++ V + P R N+ +F+ GL+ P+ L++A D N P RP E +DAII DPPY ++A R+ G LL P + D DK + A + E V L+ LA L GGRL FF P+ LRE D H+ L+ +++Q ++S CR LL + K
Sbjct: 67 RNIANRSILVKGMYELWGEGGTYEELKESILSYPDERKLPYLDSNSTFRITVDTFGKV-ISLQEQKEL----IQGFTYIPFKGK-VNLRNPDHNFWLIEVDNCEG-NNGLPPVV-------------------------QKTMFFGREV--------GGS----------DRKLIPTYELKSRNYLGPTAMDAEIAFLMANQALATPGKLVYDPFVGTGSILVAAAHFGAMTMGADID--------IRVVRDGRGPDR-----------------NVWSNFKQYGLEMPVGLLRA---DNNLPPWRPGLKEVFDAIICDPPYGVRAG--------GRKSGGRKLLKGAVEPYIVPD---DKRTD-----HIPSTAPYSLVECVHDLLDLAAKMLVMGGRLVFFYPI-----------------LREEDSPHNHFPEHPCFKLISSSEQILSS-RYCRVLLTMVK 418
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: A0A2P5W4J5_GOSBA (UPF0020 domain-containing protein n=29 Tax=Malvoideae TaxID=214907 RepID=A0A2P5W4J5_GOSBA) HSP 1 Score: 102 bits (253), Expect = 4.070e-19 Identity = 128/465 (27.53%), Postives = 191/465 (41.08%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEAARDATRS---GRFLGYVGVSWSLGFT--SYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPLRGAEARLDKLPTSLVDRLRESDHDDSRGRDYLSL-VYATKQRMTSPNMCRWLLVLEKGS 1678
RN+ N +L+ G++E+WG G D EE +A +S R L Y+ + T S+G+ + + + + G F KGR ++ N D ++E N LP V++R + RE+ GG R ++ LK R GPTA++ E+A +MAN A+A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G + N+ +F+ GL P+ L++A D N P RP E +DAII DPPY ++A + G +L + V D+ AD + A + E V L+ LA L GGRL FF P+ LRE ++ ++L + AT ++M S R LL + K S
Sbjct: 70 RNIANRSILVKGIYELWGEGNDFEEL-EEAVKSYPDERKLPYLESESTFKVTVDSFGKVLSLQEQNERIQGLSYIPF-----KGR-VNLKNPDHNFWLMETDENETNNGLPPVVKRR-------------------------IFFGREI--------GGA----------DRKLIPLYQLKTRNYLGPTAMDAEMAFLMANQAQAAPGKLVYDPFVGTGSILVSAAHFGAMTMGADI-----------DIRVVRD------GRGPDC--------NVWSNFKQYGLPMPIGLLRA---DNNLPPWRPGLKEVFDAIICDPPYGVRAGG-------RKSGGRKLLKGIVGPYTVPDDKRAD---------HIPSTAAYTLVECVHDLLDLAARMLVMGGRLVFFYPV-----------------LREDGSVETHFPEHLCFKLVATSEQMLSSRYSRVLLTMVKTS 423
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Match: V4TGE8_CITCL (UPF0020 domain-containing protein n=7 Tax=Citrus TaxID=2706 RepID=V4TGE8_CITCL) HSP 1 Score: 101 bits (252), Expect = 5.030e-19 Identity = 116/417 (27.82%), Postives = 174/417 (41.73%), Query Frame = 2
Query: 314 RNLENGCVLLHGLFEVWGHGRDKEEAARDATRS---GRFLGYVGVSWSLGFT--SYGRSNLSRAEEQALAGGPVEEFLSASLKGRRTSMNNSDIRIRIIEDTCPPPANNLPEDVRKRAEGVWAAAKAGAGAAGAAPASREKMFYICRELQVGAAVPPGGTVLTTMCGRRPTRGVLGKLALKKRRCRGPTAIEPEVALVMANLAKARPGSTVLDPFCGSCSLLLPAAHMGARTWGADVGGPATAAAALQSVNEVSEPARTHIGYGVEAQANRQSLENLLRDFEALGLDPPM-LVKADVGDKNSPVRRP---EYYDAIITDPPYNIKAKVVTTIDEPNRERGNTMLLALPDSPAVERDRGADKEWKARVGARAVARANDLVGEVVWALVSLARYSLKPGGRLCFFLPLRGAEARLDKLP 1537
R++ N +L+ G++EVWG G EE +A RS + L Y+ + T S+G+ + + + G F KGR ++ N D + +IE N LP P + ++F+ ++GAA R ++ LK R GPTA++ EVA +MAN A PG V DPF G+ S+L+ AAH GA T GAD+ + V + G G + N+ +F+ GL P+ L++A D N P RP E +DAII DPPY ++A + G +L + D V D+ RVG + A + E V L+ LA L GGRL +F P+ ++ + P
Sbjct: 58 RSIANRSILVKGMYEVWGEGSSYEEL-EEAIRSYPEDQMLPYLSSDTTFKITVDSFGKVFSFQEQNDRIKGLSYIPF-----KGR-VNLKNPDHKFWLIETDDYGVNNGLP------------------------PVAERRIFF---GREIGAA----------------DRKLIPTYQLKSRNYLGPTAMDAEVAFLMANQALVEPGKLVYDPFVGTGSILVAAAHFGAMTMGADI-----------DIRVVRD------GRGPDT--------NVWSNFKQYGLQMPIGLLRA---DNNLPPWRPGLKEVFDAIICDPPYGVRAGG-------RKSGGRKLLKGVVDPYTVPDDK--------RVG-HIPSTAPYCLSECVHDLLDLAGRMLVMGGRLVYFYPVLREDSTRNPFP 380 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1574.1 >prot_P-fluviatile_contig12.1574.1 ID=prot_P-fluviatile_contig12.1574.1|Name=mRNA_P-fluviatile_contig12.1574.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=481bp MEAARRREWRNGKELEIRNLENGCVLLHGLFEVWGHGRDKEEAARDATRSback to top mRNA from alignment at P-fluviatile_contig12:3124393..3138858+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1574.1 ID=mRNA_P-fluviatile_contig12.1574.1|Name=mRNA_P-fluviatile_contig12.1574.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14466bp|location=Sequence derived from alignment at P-fluviatile_contig12:3124393..3138858+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3124393..3138858+ >mRNA_P-fluviatile_contig12.1574.1 ID=mRNA_P-fluviatile_contig12.1574.1|Name=mRNA_P-fluviatile_contig12.1574.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2886bp|location=Sequence derived from alignment at P-fluviatile_contig12:3124393..3138858+ (Porterinema fluviatile SAG_2381)back to top |