mRNA_P-fluviatile_contig12.1565.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1565.1
Unique NamemRNA_P-fluviatile_contig12.1565.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 5.780e-99
Identity = 144/223 (64.57%), Postives = 178/223 (79.82%), Query Frame = 2
Query:  317 IVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
            +VGVDDENRSCVL Q +LRSEC ETF+W L  ++ A+GGRRPKV LTD DRAMT+AL  W TTLHL+CLWH+FKNVL+NC+SS PD +ER++M  LFRSAAYAATPEAF +Y  +LE+ + GK C EY+  LI DKTKWAFSCRPT++T+GM ATQRTEG+FG+AKR+GV K LSLC LWEKLQ + + ++VE +R+ TR + AE PFQ  HL   F P++ E
Sbjct:    1 MVGVDDENRSCVLGQGVLRSECKETFQWFLEAYETAAGGRRPKVMLTDADRAMTSALEEWTTTLHLFCLWHVFKNVLKNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKIVKGKKCEEYMDALIQDKTKWAFSCRPTLLTMGMVATQRTEGMFGVAKRSGVHKKLSLCGLWEKLQLMYQKMDVEYSRVATRGVGAELPFQTKHLQGIFAPIQEE 223          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5L618_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L618_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 8.220e-78
Identity = 141/224 (62.95%), Postives = 150/224 (66.96%), Query Frame = 2
Query:  314 FIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
            FIVGVDDENRSC+LAQCLLRSECTETF+WIL  WDGASG RRPKVFLTDG++AMTAALRGWKTTLHLYCLWHIFKNVL+NCASS PD DER  M GLFRSA YA TPEAFNK+SA+LERTIAGK CA+Y+QDLI                                                               LGTRAIAAERPFQAAHLDKFFGPVKVE
Sbjct:   97 FIVGVDDENRSCILAQCLLRSECTETFKWILTSWDGASGDRRPKVFLTDGEKAMTAALRGWKTTLHLYCLWHIFKNVLKNCASSFPDADERKGMLGLFRSATYA-TPEAFNKHSADLERTIAGKECAKYMQDLI--------------------------------------------------------------ELGTRAIAAERPFQAAHLDKFFGPVKVE 257          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KWM8_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM8_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 8.000e-74
Identity = 123/204 (60.29%), Postives = 154/204 (75.49%), Query Frame = 2
Query:  377 ECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
            +CT+TFE +L  ++ A+GGRRPKV LTD D AMTAA+   W  TLHL+CLWHIFKNV +NC+SS PD D ++ M   FR AAYAATPEAF   +A L+  +AGK C +Y+ DLI +KTKWAF  RPTV+TLGM ATQRTEGLFG+AKR+GVEK LSLCALW++LQ V+K + +E+ARL T  I     F+  H+++FF PVK E
Sbjct:  256 QCTQTFERMLNRYETAAGGRRPKVILTDADLAMTAAIASCWPDTLHLHCLWHIFKNVRKNCSSSFPDNDAKTDMLRTFRRAAYAATPEAFATQAARLKTLVAGKKCEDYMTDLITNKTKWAFCWRPTVVTLGMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHVSKMIAIETARLATPLITPGVAFRDKHVEEFFQPVKQE 459          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: D7G4F0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F0_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 3.630e-64
Identity = 109/202 (53.96%), Postives = 138/202 (68.32%), Query Frame = 2
Query:  293 GTDALFFFIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVE 895
            GT ALF           +    +     ECTE FEWIL   + A+GG +PKV LTD D AMTAA+   W  TLHL+CLWH+FKNVL+N +SS  + D+++ M   FR+AA AATPE F    A LE+ +AGK C  YI DLI +K KWAF CRP V+TLGM ATQRTEGLFG+AKR+GV+K LSLCALW++LQ ++K + ++
Sbjct:  215 GTGALFCSSWASTTTIAAAFWGRAFCSLECTEMFEWILNRHEAAAGGPKPKVILTDADLAMTAAIASCWPGTLHLHCLWHVFKNVLKNFSSSSANNDDKTDMMRCFRNAADAATPEVFATQVARLEQLVAGKKCEGYIADLIKNKAKWAFCCRPAVLTLGMVATQRTEGLFGVAKRSGVDKKLSLCALWDRLQRLSKMIAID 416          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.570e-60
Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 2
Query:  200 WKTSSGLPWTSRTRSRDMGHASRWIRRSSRTGTDALF-------------------FFIVGVDDE---NRSCVL-----------AQCL---LRSECTETFEWILGCWDGASGGRRPKVF-------------------LTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESAR 904
            W    GLP  S+ R +D+G A   I+R SRTG    F                   + ++        +R  VL           A CL   LRSECTETFEWIL  ++ A+G R+PK                     LTD D AMTAA+   W  TL  +CLWH+FKNVL NC+SS  + D+++ M   F++AA+AATPE F    A LE  +AGK C  YI DLI +KTKWAF CRPTV+TLGM ATQRT GLFG+AKR+GVEK LSLCALW++LQ ++K + +E+AR
Sbjct:  822 WWMCFGLPSNSKNRFQDLGAAYSSIQRCSRTGAHNTFDRLQVPTAHVGPLVTLHCSWLLIKTPARRLWSRDLVLLERVSMRHVTRADCLSGLLRSECTETFEWILNRYEAAAGRRKPKTQKSLSSGCRHNRAVHGLSHPLTDAD-AMTAAIASCWPGTLDFHCLWHVFKNVLMNCSSSFANNDDKTDMMRCFKNAAFAATPEVFGTQVARLEHLVAGKKCEAYIADLIKNKTKWAFYCRPTVLTLGMVATQRTGGLFGVAKRSGVEKKLSLCALWDRLQRLSKMIAIETAR 1111          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KWR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR3_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 4.540e-58
Identity = 94/155 (60.65%), Postives = 125/155 (80.65%), Query Frame = 2
Query:  452 LTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTR 916
            LTD D+AM AALR WKTT+HL+CL H+ KNV+++C+SS  D+  R +M  LFR+AAYAATPE F  Y A+LERT+ GK C +YI+DL+ +KTKWAFSCR T +TLGM ATQRTEG+FG+AK++G+ KNLSLCALW++LQ V +++++E  R  T+
Sbjct:    2 LTDADQAMAAALREWKTTVHLWCLSHLNKNVVKHCSSSFSDMKTREKMLRLFRNAAYAATPETFAAYRADLERTVNGKKCDQYIRDLLEEKTKWAFSCRLTALTLGMFATQRTEGMFGVAKKSGIHKNLSLCALWDRLQHVYQTVDIEHGREKTK 156          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5JZB4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB4_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 6.130e-58
Identity = 116/258 (44.96%), Postives = 153/258 (59.30%), Query Frame = 2
Query:  314 FIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCAS---------------------SCPDI-----------------------------------------DERSR--MQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVE 895
            FIVGVDDENR+CVL Q +LRSE TETF+W L  ++ A+GGRRPKV LTD D+AM AALR WKT +HL+ LWH+ K+V+++C+S                     + P++                                         D R+R  M  LFR+AAYAATPEAF  Y A+LERT+A      +        TKWAFSCRPT +TLGM AT+RTEG+FG+AK++G+ K LSLCALW++LQ V +++++E
Sbjct:  423 FIVGVDDENRTCVLGQGVLRSESTETFKWFLDSYEEAAGGRRPKVMLTDADQAMAAALREWKTIVHLWYLWHLNKDVVKHCSSFFSDPRTREKMLRLFRNAAYAATPEVMLTDADQAMAAALREWKTIVHLWYLWHLNKDVVKHCSSFFSDPRTREKMLRLFRNAAYAATPEAFAAYRADLERTVATSTSGTF-------STKWAFSCRPTALTLGMVATKRTEGMFGVAKKSGIHKKLSLCALWDRLQHVYQTMDIE 673          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 8.520e-55
Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 2
Query:  440 PKVFLTDGDRAMTAALRGWKT--------TLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
            P  F    +R +     GW          T+HL+CLWH+FKNVL+NC+SS    D+++ M   FR+ AYAATPE F    A LE+ +AGK C  YI DLI +KTKWAF CRPTV+TLGM ATQRTEGLFG+AK +GVEK LSLCALW++LQ ++K + +E+ARL T  + A   F   H++ FF PVK E
Sbjct:  655 PHPFARHNERCLGPKWPGWSNLWPXCWPGTMHLHCLWHVFKNVLKNCSSSFAYNDDKTDMMQCFRNEAYAATPEVFGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKSSGVEKKLSLCALWDRLQRLSKMIAIETARLATPPLGAGVAFGDIHVENFFRPVKQE 844          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KAB1_9PHAE (SWIM-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB1_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.110e-52
Identity = 117/277 (42.24%), Postives = 143/277 (51.62%), Query Frame = 2
Query:  311 FFIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGG--RRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIF-----------------------------KNVLENCASSCPDIDERSRMQGLFRSAAYAATPE-----------------------------------------------AFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESAR 904
            F  VGVDDENRSC+L Q LLRSEC ETFEW L  ++ A+GG  RRPKV LTD D AMT+A+   WK T HL+CLWH+                              KN+++ CA +  D D R+RM   FRSAAYA   E                                               AF     ++E+  AG  C EY+ +L  +K+KWAF CR T + LGMAATQR EGLF +AKR GV K LSLCALW+ L+ V+ SL +ESAR
Sbjct:   77 FLFVGVDDENRSCILGQGLLRSECAETFEWFLTQYESAAGGWERRPKVILTDADVAMTSAVASVWKGTQHLFCLWHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKNLVKKCAGALSDHD-RTRMLRSFRSAAYAVNAEVRFEASSPAPGTLFRSKLSDCLGSYLIQTWPNMALPVATRHRCAYFQAFASSRGQMEQISAGTKCEEYVDNLFKNKSKWAFYCRTTTLALGMAATQRVEGLFSVAKRMGVIKQLSLCALWDVLRRVDTSLAIESAR 352          
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 3.900e-51
Identity = 111/242 (45.87%), Postives = 135/242 (55.79%), Query Frame = 2
Query:  281 SSRTGTDALFFFIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGG--RRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPE-----------------------------------------------AFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALW 856
            ++R G   L F  VGVDDENRSC+L Q LLRSEC ETFEW L  ++ A+GG  RRPKV LTD D AMT+A+   WK T HL+CLWH+ KN+++ CA +  D D R+RM   FRSAAYA   E                                               AF     ++E+   G  C EY+ +L  +K+KWAF CR T + LGMAATQR EGLF +AKR GV K LSLCALW
Sbjct:  318 ANRYGCPVLLF--VGVDDENRSCILGQGLLRSECAETFEWFLTQYESAAGGWERRPKVILTDADVAMTSAVPSVWKGTQHLFCLWHVNKNLVKKCAGALSDHD-RTRMLRSFRSAAYAVNAEVRFEASSPAPGTLFRSKLSDCLGSYLIQTWPNMALPVATRHRCAYFQAFASSRGQMEQISTGTKCEEYVDNLFKNKSKWAFYCRTTTLALGMAATQRVEGLFSVAKRMGVIKQLSLCALW 556          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JY17_9PHAE5.780e-9964.57SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5L618_9PHAE8.220e-7862.95MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KWM8_9PHAE8.000e-7460.29MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G4F0_ECTSI3.630e-6453.96MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9T1_9PHAE1.570e-6045.36SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KWR3_9PHAE4.540e-5860.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZB4_9PHAE6.130e-5844.96SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBY4_9PHAE8.520e-5552.63SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAB1_9PHAE1.110e-5242.24SWIM-type domain-containing protein (Fragment) n=1... [more]
A0A6H5KG54_9PHAE3.900e-5145.87SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3075273..3077411 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score108.6
Seed ortholog evalue4.2e-21
Seed eggNOG ortholog2880.D7FLF6
EggNOG OGs2CMGX@1,2QQB8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size987
Cds size735
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1565.1prot_P-fluviatile_contig12.1565.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 3075273..3076910 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.6618752-CDS-P-fluviatile_contig12:3075272..30753541622815527.6618752-CDS-P-fluviatile_contig12:3075272..3075354Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3075273..3075354 -
1693562138.830601-CDS-P-fluviatile_contig12:3075272..30753541693562138.830601-CDS-P-fluviatile_contig12:3075272..3075354Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3075273..3075354 -
1622815527.679984-CDS-P-fluviatile_contig12:3075574..30757601622815527.679984-CDS-P-fluviatile_contig12:3075574..3075760Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3075575..3075760 -
1693562138.8401763-CDS-P-fluviatile_contig12:3075574..30757601693562138.8401763-CDS-P-fluviatile_contig12:3075574..3075760Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3075575..3075760 -
1622815527.6970022-CDS-P-fluviatile_contig12:3075969..30760491622815527.6970022-CDS-P-fluviatile_contig12:3075969..3076049Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3075970..3076049 -
1693562138.8505328-CDS-P-fluviatile_contig12:3075969..30760491693562138.8505328-CDS-P-fluviatile_contig12:3075969..3076049Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3075970..3076049 -
1622815527.7114642-CDS-P-fluviatile_contig12:3076206..30763981622815527.7114642-CDS-P-fluviatile_contig12:3076206..3076398Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3076207..3076398 -
1693562138.860529-CDS-P-fluviatile_contig12:3076206..30763981693562138.860529-CDS-P-fluviatile_contig12:3076206..3076398Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3076207..3076398 -
1622815527.7245448-CDS-P-fluviatile_contig12:3076566..30767181622815527.7245448-CDS-P-fluviatile_contig12:3076566..3076718Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3076567..3076718 -
1693562138.8713744-CDS-P-fluviatile_contig12:3076566..30767181693562138.8713744-CDS-P-fluviatile_contig12:3076566..3076718Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3076567..3076718 -
1622815527.7380817-CDS-P-fluviatile_contig12:3076867..30769101622815527.7380817-CDS-P-fluviatile_contig12:3076867..3076910Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3076868..3076910 -
1693562138.889906-CDS-P-fluviatile_contig12:3076867..30769101693562138.889906-CDS-P-fluviatile_contig12:3076867..3076910Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3076868..3076910 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.7503703-UTR-P-fluviatile_contig12:3076910..30770911622815527.7503703-UTR-P-fluviatile_contig12:3076910..3077091Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3076911..3077091 -
1693562138.9023936-UTR-P-fluviatile_contig12:3076910..30770911693562138.9023936-UTR-P-fluviatile_contig12:3076910..3077091Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3076911..3077091 -
1622815527.7603161-UTR-P-fluviatile_contig12:3077342..30774111622815527.7603161-UTR-P-fluviatile_contig12:3077342..3077411Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3077343..3077411 -
1693562138.911974-UTR-P-fluviatile_contig12:3077342..30774111693562138.911974-UTR-P-fluviatile_contig12:3077342..3077411Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3077343..3077411 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1565.1

>prot_P-fluviatile_contig12.1565.1 ID=prot_P-fluviatile_contig12.1565.1|Name=mRNA_P-fluviatile_contig12.1565.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=245bp
MGHASRWIRRSSRTGTDALFFFIVGVDDENRSCVLAQCLLRSECTETFEW
ILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLE
NCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEY
IQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCA
LWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE
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mRNA from alignment at P-fluviatile_contig12:3075273..3077411-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1565.1 ID=mRNA_P-fluviatile_contig12.1565.1|Name=mRNA_P-fluviatile_contig12.1565.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2139bp|location=Sequence derived from alignment at P-fluviatile_contig12:3075273..3077411- (Porterinema fluviatile SAG_2381)
GGAGAAATCTTCAAGCTACCTCAAATGGATCAAGAGGGCAAGGTTTAGTG CAGGGACGGGAAGAAGAAGGTGAGTTTTGGCTTGGTTACCCTTGGTCATG CTTGCGAAGTGTTTGTATGGCATGAAGTGGTGCCGGTAACAGGGAAAACT AGGACGTCGTCATGCTCTGAGCACGTCCGCCCAATCCTCTCCCCACTCAT GTATAGTCGATGCCTCTTGATTCGGAGGTAGGGTCTCACTTGGCCTGTGC GAATGTTGATCCTGCCGCCACTTTGTGTATCGTGTGTGTATGTGTGTTGG CATTGCTGCCCCAACGCTAGGTGTACAATGCGATGGCCGCGATTAAAGAC CAGCTGTACTCGAGTCCCGAAGACGGGTCGAATTTCCTGGTGACTCTCCA GTCGGAGCCCGGTTTGTTCGTCGAAAGCACTTTCGACGAAACCGGGAGGC TGGAAAACATCTTCTGGGCTACCGTGGACCAGCAGAACAAGATCGCGAGA TATGGGGCATGCATCCAGATGGATACGACGGTCTTCACGAACAGGTACTG CCTCTGAGTGTTTCAGAGGAGGGCACGCGTAGGGCTATTGAGTGTGGCGA AGGCCCCGACTTAACTCCCCGCGTCGTAGCGAAATGCATTAATTGATGCC TTCGTGTGATGTCGCCACCCGCCCGTGCCTCCCCTATTGACAGGTACGGA TGCCCTCTTCTTTTTTATTGTGGGCGTTGACGACGAAAACCGGAGCTGCG TCTTGGCGCAGTGCCTGCTGCGGTCGGAATGCACTGAGACATTCGAGTGG ATCTTGGGTTGCTGGGACGGCGCTTCTGGAGGCCGGAGGCCGAAGGTACG ACACATTAATCCCGCAGTCGATATCTGGGAGGTGGCACGTTCTATCGCAC CCTCAGGAGTTCACCCGTCACGAGGTCCCCGAGACCGTCCTCGCGCGCCT TCGCTTTTGTGCTGGCACGACACATCGCCCTGCCTCCGAACCCTGGAATG CTGATGTGGCCAGGTCTTCCTGACGGATGGGGACAGGGCGATGACCGCTG CCCTGCGGGGATGGAAGACAACGTTGCACCTGTACTGTCTGTGGCACATC TTCAAGAACGTCCTCGAGAACTGTGCCTCGTCTTGCCCCGACATTGATGA GCGCAGCAGGATGCAAGGTCTCTTTCGCAGCGCCGCCTACGCAGCGACGC CGGAGGTGAGATACCGGCATACCAACTGTGTGCGTTGACGTGAATATGCT GTCGACGTTTTGCAATGCCCCCGTGACGAATGGAGCATACTTTCGGAAGA CCCCACTCACGTGTACCCCTCATGACCATCATGGCGGCTGGGATATTTGC TCTTGCGTGCAGGCCTTTAACAAGTACAGTGCTGAACTGGAGAGGACAAT TGCGGGCAAGGCGTGTGCCGAGTACATACAGGACTTAATCGTGTAAGTAC GCCGTTGCTTCTCACGCCCCGATTGGCGAATAAACTTCGATGTTGAATTT GTTGGTCGCATGTTCGAAAACTTTGGTCCTCTGCAGGGCAAAGACTACGA GCTAAGTCCAACCCTGGCCTGTCCTTTCAGTAGGGAAAGCCGCAGATTCA AAGCCTAACCCCACTTGGATGACGCCGCTGCTGTTTACCCTAACCCCCAA GGGACAAGACTAAGTGGGCATTCTCATGTCGGCCGACGGTTATGACCCTC GGCATGGCCGCGACCCAGCGCACAGAGGGCTTATTCGGGATTGCTAAACG AGCTGGAGTAGAGAAAAATCTTTCCCTGTGCGCTCTTTGGGAGAAGCTTC AAAGTGTGAACAAGTCTCTGGAGGTAGAATCTGCCAGGCGAGTATCGCAC GACGCACTAGCGCCATGAAGTTTCTACGGGCATCGCTCATAGTCGTGTCG ATGGGAACGTACGCAGTTGACCCATGTCGCCATCAGCGAAGGCCATGATG TGTCCACAACAACTTTGCTCCGATGTCGAATGAAGTTAGTCCTGCGCTTC GGCCAACAACATGCTTCATCCACCCCATGCTTCACCTCCCTAACCTCGTC CGTGCAGGTTGGGAACGCGAGCTATTGCAGCAGAGAGGCCATTCCAGGCT GCGCACCTTGATAAGTTTTTCGGGCCCGTCAAAGTGGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:3075273..3077411-

>mRNA_P-fluviatile_contig12.1565.1 ID=mRNA_P-fluviatile_contig12.1565.1|Name=mRNA_P-fluviatile_contig12.1565.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1470bp|location=Sequence derived from alignment at P-fluviatile_contig12:3075273..3077411- (Porterinema fluviatile SAG_2381)
ATGGGGCATGCATCCAGATGGATACGACGGTCTTCACGAACAGATGGGGC
ATGCATCCAGATGGATACGACGGTCTTCACGAACAGGTACGGATGCCCTC
TTCTTTTTTATTGTGGGCGTTGACGACGAAAACCGGAGCTGCGTCTTGGC
GCAGTGCCTGCTGCGGTCGGAATGCACTGAGACATTCGAGTGGATCTTGG
GTTGCTGGGACGGCGCTTCTGGAGGCCGGAGGCCGAAGGTACGGATGCCC
TCTTCTTTTTTATTGTGGGCGTTGACGACGAAAACCGGAGCTGCGTCTTG
GCGCAGTGCCTGCTGCGGTCGGAATGCACTGAGACATTCGAGTGGATCTT
GGGTTGCTGGGACGGCGCTTCTGGAGGCCGGAGGCCGAAGGTCTTCCTGA
CGGATGGGGACAGGGCGATGACCGCTGCCCTGCGGGGATGGAAGACAACG
TTGCACCTGTACTGTCTGTGGCACATCTTCAAGAACGTCCTCGAGAACTG
TGCCTCGTCTTGCCCCGACATTGATGAGCGCAGCAGGATGCAAGGTCTCT
TTCGCAGCGCCGCCTACGCAGCGACGCCGGAGGTCTTCCTGACGGATGGG
GACAGGGCGATGACCGCTGCCCTGCGGGGATGGAAGACAACGTTGCACCT
GTACTGTCTGTGGCACATCTTCAAGAACGTCCTCGAGAACTGTGCCTCGT
CTTGCCCCGACATTGATGAGCGCAGCAGGATGCAAGGTCTCTTTCGCAGC
GCCGCCTACGCAGCGACGCCGGAGGCCTTTAACAAGTACAGTGCTGAACT
GGAGAGGACAATTGCGGGCAAGGCGTGTGCCGAGTACATACAGGACTTAA
TCGTGCCTTTAACAAGTACAGTGCTGAACTGGAGAGGACAATTGCGGGCA
AGGCGTGTGCCGAGTACATACAGGACTTAATCGTGGACAAGACTAAGTGG
GCATTCTCATGTCGGCCGACGGTTATGACCCTCGGCATGGCCGCGACCCA
GCGCACAGAGGGCTTATTCGGGATTGCTAAACGAGCTGGAGTAGAGAAAA
ATCTTTCCCTGTGCGCTCTTTGGGAGAAGCTTCAAAGTGTGAACAAGTCT
CTGGAGGTAGAATCTGCCAGGGACAAGACTAAGTGGGCATTCTCATGTCG
GCCGACGGTTATGACCCTCGGCATGGCCGCGACCCAGCGCACAGAGGGCT
TATTCGGGATTGCTAAACGAGCTGGAGTAGAGAAAAATCTTTCCCTGTGC
GCTCTTTGGGAGAAGCTTCAAAGTGTGAACAAGTCTCTGGAGGTAGAATC
TGCCAGGTTGGGAACGCGAGCTATTGCAGCAGAGAGGCCATTCCAGGCTG
CGCACCTTGATAAGTTTTTCGGGCCCGTCAAAGTGGAGGTTGGGAACGCG
AGCTATTGCAGCAGAGAGGCCATTCCAGGCTGCGCACCTTGATAAGTTTT
TCGGGCCCGTCAAAGTGGAG
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