mRNA_P-fluviatile_contig12.1565.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE) HSP 1 Score: 313 bits (801), Expect = 5.780e-99 Identity = 144/223 (64.57%), Postives = 178/223 (79.82%), Query Frame = 2
Query: 317 IVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
+VGVDDENRSCVL Q +LRSEC ETF+W L ++ A+GGRRPKV LTD DRAMT+AL W TTLHL+CLWH+FKNVL+NC+SS PD +ER++M LFRSAAYAATPEAF +Y +LE+ + GK C EY+ LI DKTKWAFSCRPT++T+GM ATQRTEG+FG+AKR+GV K LSLC LWEKLQ + + ++VE +R+ TR + AE PFQ HL F P++ E
Sbjct: 1 MVGVDDENRSCVLGQGVLRSECKETFQWFLEAYETAAGGRRPKVMLTDADRAMTSALEEWTTTLHLFCLWHVFKNVLKNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKIVKGKKCEEYMDALIQDKTKWAFSCRPTLLTMGMVATQRTEGMFGVAKRSGVHKKLSLCGLWEKLQLMYQKMDVEYSRVATRGVGAELPFQTKHLQGIFAPIQEE 223
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5L618_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L618_9PHAE) HSP 1 Score: 264 bits (674), Expect = 8.220e-78 Identity = 141/224 (62.95%), Postives = 150/224 (66.96%), Query Frame = 2
Query: 314 FIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
FIVGVDDENRSC+LAQCLLRSECTETF+WIL WDGASG RRPKVFLTDG++AMTAALRGWKTTLHLYCLWHIFKNVL+NCASS PD DER M GLFRSA YA TPEAFNK+SA+LERTIAGK CA+Y+QDLI LGTRAIAAERPFQAAHLDKFFGPVKVE
Sbjct: 97 FIVGVDDENRSCILAQCLLRSECTETFKWILTSWDGASGDRRPKVFLTDGEKAMTAALRGWKTTLHLYCLWHIFKNVLKNCASSFPDADERKGMLGLFRSATYA-TPEAFNKHSADLERTIAGKECAKYMQDLI--------------------------------------------------------------ELGTRAIAAERPFQAAHLDKFFGPVKVE 257
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KWM8_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM8_9PHAE) HSP 1 Score: 250 bits (638), Expect = 8.000e-74 Identity = 123/204 (60.29%), Postives = 154/204 (75.49%), Query Frame = 2
Query: 377 ECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
+CT+TFE +L ++ A+GGRRPKV LTD D AMTAA+ W TLHL+CLWHIFKNV +NC+SS PD D ++ M FR AAYAATPEAF +A L+ +AGK C +Y+ DLI +KTKWAF RPTV+TLGM ATQRTEGLFG+AKR+GVEK LSLCALW++LQ V+K + +E+ARL T I F+ H+++FF PVK E
Sbjct: 256 QCTQTFERMLNRYETAAGGRRPKVILTDADLAMTAAIASCWPDTLHLHCLWHIFKNVRKNCSSSFPDNDAKTDMLRTFRRAAYAATPEAFATQAARLKTLVAGKKCEDYMTDLITNKTKWAFCWRPTVVTLGMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHVSKMIAIETARLATPLITPGVAFRDKHVEEFFQPVKQE 459
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: D7G4F0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F0_ECTSI) HSP 1 Score: 218 bits (554), Expect = 3.630e-64 Identity = 109/202 (53.96%), Postives = 138/202 (68.32%), Query Frame = 2
Query: 293 GTDALFFFIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVE 895
GT ALF + + ECTE FEWIL + A+GG +PKV LTD D AMTAA+ W TLHL+CLWH+FKNVL+N +SS + D+++ M FR+AA AATPE F A LE+ +AGK C YI DLI +K KWAF CRP V+TLGM ATQRTEGLFG+AKR+GV+K LSLCALW++LQ ++K + ++
Sbjct: 215 GTGALFCSSWASTTTIAAAFWGRAFCSLECTEMFEWILNRHEAAAGGPKPKVILTDADLAMTAAIASCWPGTLHLHCLWHVFKNVLKNFSSSSANNDDKTDMMRCFRNAADAATPEVFATQVARLEQLVAGKKCEGYIADLIKNKAKWAFCCRPAVLTLGMVATQRTEGLFGVAKRSGVDKKLSLCALWDRLQRLSKMIAID 416
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE) HSP 1 Score: 219 bits (558), Expect = 1.570e-60 Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 2
Query: 200 WKTSSGLPWTSRTRSRDMGHASRWIRRSSRTGTDALF-------------------FFIVGVDDE---NRSCVL-----------AQCL---LRSECTETFEWILGCWDGASGGRRPKVF-------------------LTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESAR 904
W GLP S+ R +D+G A I+R SRTG F + ++ +R VL A CL LRSECTETFEWIL ++ A+G R+PK LTD D AMTAA+ W TL +CLWH+FKNVL NC+SS + D+++ M F++AA+AATPE F A LE +AGK C YI DLI +KTKWAF CRPTV+TLGM ATQRT GLFG+AKR+GVEK LSLCALW++LQ ++K + +E+AR
Sbjct: 822 WWMCFGLPSNSKNRFQDLGAAYSSIQRCSRTGAHNTFDRLQVPTAHVGPLVTLHCSWLLIKTPARRLWSRDLVLLERVSMRHVTRADCLSGLLRSECTETFEWILNRYEAAAGRRKPKTQKSLSSGCRHNRAVHGLSHPLTDAD-AMTAAIASCWPGTLDFHCLWHVFKNVLMNCSSSFANNDDKTDMMRCFKNAAFAATPEVFGTQVARLEHLVAGKKCEAYIADLIKNKTKWAFYCRPTVLTLGMVATQRTGGLFGVAKRSGVEKKLSLCALWDRLQRLSKMIAIETAR 1111
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KWR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR3_9PHAE) HSP 1 Score: 202 bits (515), Expect = 4.540e-58 Identity = 94/155 (60.65%), Postives = 125/155 (80.65%), Query Frame = 2
Query: 452 LTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTR 916
LTD D+AM AALR WKTT+HL+CL H+ KNV+++C+SS D+ R +M LFR+AAYAATPE F Y A+LERT+ GK C +YI+DL+ +KTKWAFSCR T +TLGM ATQRTEG+FG+AK++G+ KNLSLCALW++LQ V +++++E R T+
Sbjct: 2 LTDADQAMAAALREWKTTVHLWCLSHLNKNVVKHCSSSFSDMKTREKMLRLFRNAAYAATPETFAAYRADLERTVNGKKCDQYIRDLLEEKTKWAFSCRLTALTLGMFATQRTEGMFGVAKKSGIHKNLSLCALWDRLQHVYQTVDIEHGREKTK 156
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5JZB4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB4_9PHAE) HSP 1 Score: 211 bits (537), Expect = 6.130e-58 Identity = 116/258 (44.96%), Postives = 153/258 (59.30%), Query Frame = 2
Query: 314 FIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGGRRPKVFLTDGDRAMTAALRGWKTTLHLYCLWHIFKNVLENCAS---------------------SCPDI-----------------------------------------DERSR--MQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVE 895
FIVGVDDENR+CVL Q +LRSE TETF+W L ++ A+GGRRPKV LTD D+AM AALR WKT +HL+ LWH+ K+V+++C+S + P++ D R+R M LFR+AAYAATPEAF Y A+LERT+A + TKWAFSCRPT +TLGM AT+RTEG+FG+AK++G+ K LSLCALW++LQ V +++++E
Sbjct: 423 FIVGVDDENRTCVLGQGVLRSESTETFKWFLDSYEEAAGGRRPKVMLTDADQAMAAALREWKTIVHLWYLWHLNKDVVKHCSSFFSDPRTREKMLRLFRNAAYAATPEVMLTDADQAMAAALREWKTIVHLWYLWHLNKDVVKHCSSFFSDPRTREKMLRLFRNAAYAATPEAFAAYRADLERTVATSTSGTF-------STKWAFSCRPTALTLGMVATKRTEGMFGVAKKSGIHKKLSLCALWDRLQHVYQTMDIE 673
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE) HSP 1 Score: 202 bits (515), Expect = 8.520e-55 Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 2
Query: 440 PKVFLTDGDRAMTAALRGWKT--------TLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPEAFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESARLGTRAIAAERPFQAAHLDKFFGPVKVE 985
P F +R + GW T+HL+CLWH+FKNVL+NC+SS D+++ M FR+ AYAATPE F A LE+ +AGK C YI DLI +KTKWAF CRPTV+TLGM ATQRTEGLFG+AK +GVEK LSLCALW++LQ ++K + +E+ARL T + A F H++ FF PVK E
Sbjct: 655 PHPFARHNERCLGPKWPGWSNLWPXCWPGTMHLHCLWHVFKNVLKNCSSSFAYNDDKTDMMQCFRNEAYAATPEVFGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKSSGVEKKLSLCALWDRLQRLSKMIAIETARLATPPLGAGVAFGDIHVENFFRPVKQE 844
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KAB1_9PHAE (SWIM-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB1_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.110e-52 Identity = 117/277 (42.24%), Postives = 143/277 (51.62%), Query Frame = 2
Query: 311 FFIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGG--RRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIF-----------------------------KNVLENCASSCPDIDERSRMQGLFRSAAYAATPE-----------------------------------------------AFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALWEKLQSVNKSLEVESAR 904
F VGVDDENRSC+L Q LLRSEC ETFEW L ++ A+GG RRPKV LTD D AMT+A+ WK T HL+CLWH+ KN+++ CA + D D R+RM FRSAAYA E AF ++E+ AG C EY+ +L +K+KWAF CR T + LGMAATQR EGLF +AKR GV K LSLCALW+ L+ V+ SL +ESAR
Sbjct: 77 FLFVGVDDENRSCILGQGLLRSECAETFEWFLTQYESAAGGWERRPKVILTDADVAMTSAVASVWKGTQHLFCLWHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKNLVKKCAGALSDHD-RTRMLRSFRSAAYAVNAEVRFEASSPAPGTLFRSKLSDCLGSYLIQTWPNMALPVATRHRCAYFQAFASSRGQMEQISAGTKCEEYVDNLFKNKSKWAFYCRTTTLALGMAATQRVEGLFSVAKRMGVIKQLSLCALWDVLRRVDTSLAIESAR 352
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE) HSP 1 Score: 191 bits (486), Expect = 3.900e-51 Identity = 111/242 (45.87%), Postives = 135/242 (55.79%), Query Frame = 2
Query: 281 SSRTGTDALFFFIVGVDDENRSCVLAQCLLRSECTETFEWILGCWDGASGG--RRPKVFLTDGDRAMTAALRG-WKTTLHLYCLWHIFKNVLENCASSCPDIDERSRMQGLFRSAAYAATPE-----------------------------------------------AFNKYSAELERTIAGKACAEYIQDLIVDKTKWAFSCRPTVMTLGMAATQRTEGLFGIAKRAGVEKNLSLCALW 856
++R G L F VGVDDENRSC+L Q LLRSEC ETFEW L ++ A+GG RRPKV LTD D AMT+A+ WK T HL+CLWH+ KN+++ CA + D D R+RM FRSAAYA E AF ++E+ G C EY+ +L +K+KWAF CR T + LGMAATQR EGLF +AKR GV K LSLCALW
Sbjct: 318 ANRYGCPVLLF--VGVDDENRSCILGQGLLRSECAETFEWFLTQYESAAGGWERRPKVILTDADVAMTSAVPSVWKGTQHLFCLWHVNKNLVKKCAGALSDHD-RTRMLRSFRSAAYAVNAEVRFEASSPAPGTLFRSKLSDCLGSYLIQTWPNMALPVATRHRCAYFQAFASSRGQMEQISTGTKCEEYVDNLFKNKSKWAFYCRTTTLALGMAATQRVEGLFSVAKRMGVIKQLSLCALW 556 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1565.1 >prot_P-fluviatile_contig12.1565.1 ID=prot_P-fluviatile_contig12.1565.1|Name=mRNA_P-fluviatile_contig12.1565.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=245bp MGHASRWIRRSSRTGTDALFFFIVGVDDENRSCVLAQCLLRSECTETFEWback to top mRNA from alignment at P-fluviatile_contig12:3075273..3077411- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1565.1 ID=mRNA_P-fluviatile_contig12.1565.1|Name=mRNA_P-fluviatile_contig12.1565.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2139bp|location=Sequence derived from alignment at P-fluviatile_contig12:3075273..3077411- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3075273..3077411- >mRNA_P-fluviatile_contig12.1565.1 ID=mRNA_P-fluviatile_contig12.1565.1|Name=mRNA_P-fluviatile_contig12.1565.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1470bp|location=Sequence derived from alignment at P-fluviatile_contig12:3075273..3077411- (Porterinema fluviatile SAG_2381)back to top |