mRNA_P-fluviatile_contig12.1562.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1562.1
Unique NamemRNA_P-fluviatile_contig12.1562.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A6H5KUI5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI5_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 2.350e-186
Identity = 341/540 (63.15%), Postives = 381/540 (70.56%), Query Frame = 3
Query: 1053 HVADFQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGEVGSPIIQDLVAKHLPVLTSFREEASDAKASMA-RPDGEELSGSKTATLRRMNA-RGGDGYLGNGSPGARFSGANPTKTDATEMSPEQRELAASIFASAGEGEDGGS---SSDGSVIRVPKSGGDEDEAGXXXXXGYSSSRSVNRAYAS-------KAACSQSAXXXXXXXXDGSVIRVPAHSAEVDSGVEDQSRNVAGNDGVEKARSAAELGNG-------DNDATAAELVSTGNAPAHMKLNLLAASKYFSPKGGGSHCGVGAGTEAQRNGSAMVLRTEVDNPQVKILLDELRRLDVSFAEDQAQLRRTYDTKKANIQAQLRVLLDSQKRVAG 2615
            H   ++DNEAWLVMDFVGGGSV DILEAC+VTLSE+EARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQT IGTPYWMAPEVIQEVPY+GQADIWSLAITCIEMVEGNPPLH+VHPMRAIFMIPSKPSPTLSEPAKWSLEFNDF+GRCLEKKP+DRPSSRAILRHPWIAA VE IQS  GE GS +IQDLVA+HLPVL  FREEASDAKA+MA +   E+ SGSKTATLRRM++ +GGD +  NGSP AR  G++    DA    PEQ +          + ED G    SSDGSVIRVP  GG+E E G      YSSS SV R  A+       K A   +A XXXXXXX           A       D+S     ++   +   AA+ G G        +D    E  S   APAHMK+NLLAASKYF  KGG S  G GA     +           DNPQVK LLDEL RLDV+FA D ++L+ TYD  +A++QA+LR LLDS     G
Sbjct:   73 HDCFYKDNEAWLVMDFVGGGSVCDILEACQVTLSEDEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTVIGTPYWMAPEVIQEVPYNGQADIWSLAITCIEMVEGNPPLHNVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFVGRCLEKKPDDRPSSRAILRHPWIAASVEAIQSCDGERGSAVIQDLVAEHLPVLKRFREEASDAKANMAGQESSEDCSGSKTATLRRMSSTKGGDVFRANGSPDARVPGSHGDGADADGRMPEQEDEC--------DDEDSGGDECSSDGSVIRVPIGGGEEAEEGEEDC--YSSSGSVIRVDANEDDGGVLKTAGGSNADXXXXXXXXXXXXXXXXSKAGCGG---DRSGQRPKDESPPEDDPAADGGCGRRGWEGQGHDGNVVEPRSASQAPAHMKMNLLAASKYFGRKGGASDGGPGAAARESQQAD--------DNPQVKALLDELERLDVTFANDLSRLKDTYDRSRASLQAKLRHLLDSSNAAVG 591          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: D7G917_ECTSI (Protein serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G917_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 3.620e-121
Identity = 198/257 (77.04%), Postives = 208/257 (80.93%), Query Frame = 3
Query: 1053 HVADFQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGEVGSPIIQDLVAKHLPVLTSFREEASDAKASMA-RPDGEELSGSKTATLRRM 1820
            H   ++DNEAWLVMDFVGGGSV DILEAC+VTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQT IGTPYWMAPEVIQEVPY+GQADIWSLAITCIEMVEGNPPLH+VHPMRAIFMIPSKPSPTLSEPAKWSLEFNDF+GRCLEKKP+DRPSSRAILR                                       EASDAKA+MA +   E+ SGSKTATLRRM
Sbjct:   35 HDCFYKDNEAWLVMDFVGGGSVCDILEACQVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTVIGTPYWMAPEVIQEVPYNGQADIWSLAITCIEMVEGNPPLHNVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFVGRCLEKKPDDRPSSRAILR---------------------------------------EASDAKANMAGQESSEDGSGSKTATLRRM 252          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A835ZA30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA30_9STRA)

HSP 1 Score: 289 bits (740), Expect = 8.820e-85
Identity = 133/189 (70.37%), Postives = 153/189 (80.95%), Query Frame = 3
Query: 1053 HVADFQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILR 1619
            H   ++D EAWLVMD+  GGS  D+++AC++T SE+E RE  AW++L L YLHSNRKLHRDVKAGN+LLT DGRAKLADFGVSKEV T+ NKAQT IGTPYWMAPEVIQEVPYDG+AD+WSL IT IEM EGNPPLH VHPMRAIFMIPSKP P L EP KW+  F+DF+ RCL K PE+R +  A  R
Sbjct:   74 HECYYKDREAWLVMDYCAGGSSCDVIDACQITFSEDEVREAMAWSLLGLQYLHSNRKLHRDVKAGNVLLTGDGRAKLADFGVSKEVTTLQNKAQTVIGTPYWMAPEVIQEVPYDGRADVWSLGITAIEMAEGNPPLHKVHPMRAIFMIPSKPPPKLKEPDKWTAPFHDFLARCLVKAPEERATCDAFRR 262          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A7S1UKA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKA4_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.840e-78
Identity = 133/241 (55.19%), Postives = 168/241 (69.71%), Query Frame = 3
Query: 1071 DNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGE---VGSPIIQDLVAKHLPVLTSFREEASDAKASMARPDGEE 1784
            +NE W+ MD   GGSVSD+L+A + TL E++ R   A+TVL LD+LH  R LHRD+KAGNILL   G AKLADFG+S E+     K +T IGTP+WMAPEVIQE  YDG+AD+WSL ITCIEM EG PP  ++HPMRAIFMIP +P P LSEP KWS EFNDFI RCL K P++R SS  +L HP+IA+ V +IQ + G    VG+  ++DL+ +    L  FR+ A+        PDG++
Sbjct:   81 NNEVWIFMDLCEGGSVSDLLDATQATLDEDQIRVVCAYTVLGLDFLHGQRHLHRDIKAGNILLDESGCAKLADFGISAEMTNSITKRKTVIGTPFWMAPEVIQESGYDGKADVWSLGITCIEMAEGQPPYFNIHPMRAIFMIPGRPPPKLSEPKKWSTEFNDFIARCLVKVPDERASSHDLLSHPFIASTVANIQGKVGRNEPVGNTTLRDLLVRSAGALARFRDSAA--------PDGDD 313          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A7S1G6G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6G9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 3.380e-72
Identity = 114/223 (51.12%), Postives = 157/223 (70.40%), Query Frame = 3
Query: 1068 QDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGEVGSPIIQDLVAKHLPVLTSFRE 1736
            +DNE W+VM++ G GSV+D++  C VTL+E E  +  A  +L L YLH    +HRDVKAGN+LL+ +G AK+ADFGVS ++N   ++ +T IGTP+WMAPEVIQE  YDG+AD+WSL IT IEM EG PP   +HPMRAIF+IP+ P P L++ AKWS    DF+  CL+K P DRP+   +L+HP++A   E +  R G   SP++ +LV KH+P +  +R+
Sbjct:   68 KDNELWIVMEYCGAGSVNDLITICNVTLTEPEIADVCASMLLGLSYLHREHLIHRDVKAGNVLLSPEGNAKMADFGVSAQLNNTMSRRRTVIGTPFWMAPEVIQETSYDGKADVWSLGITIIEMAEGEPPNSHIHPMRAIFLIPTLPPPKLADAAKWSPHMQDFVKLCLQKDPADRPTVDELLKHPFVARNAEALVRREGV--SPVLSELVEKHMPTICDYRD 288          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A7S3LJ83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJ83_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.420e-68
Identity = 110/193 (56.99%), Postives = 144/193 (74.61%), Query Frame = 3
Query: 1074 NEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDI 1652
            N  W+VMD+   GSVSD++ A  +TL+E+E R   A +VL L +LHS R +HRD+KAGNILLT DG AKLADFGVSK++NTM +KA TAIGTPYWMAPEVIQE  Y+ +AD+WSL IT IEM +G PP  ++HPMRA+F+IP KP PTL  P +WS E  DF+ +C+ K P +R +++ +L HP+I    +D+
Sbjct:   37 NTMWIVMDYCEAGSVSDLMNATRMTLAEDEIRVIMAASVLGLSHLHSLRMIHRDIKAGNILLTKDGTAKLADFGVSKQLNTMQSKADTAIGTPYWMAPEVIQEGAYNSKADVWSLGITLIEMADGEPPFSNMHPMRALFVIPKKPPPTLKHPQEWSAEMVDFLSKCVVKDPHERSTTQELLSHPFIKDTADDL 229          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A7S2RNS6_9STRA (Hypothetical protein n=3 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RNS6_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.730e-67
Identity = 114/246 (46.34%), Postives = 163/246 (66.26%), Query Frame = 3
Query: 1041 LLCDHVADFQDNEA---WLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGEVGSPIIQDLVAKHLPVLTSFREEASDAKASMAR 1769
             +  ++  +Q+ E    W+VM+    GSV+D++  C++  +EEE R   A  +L L YLH N+ +HRDVKAGNIL+T DG  KLADFGVS ++ +  +K +T IGTP+WMAPEVI E  YDG+ADIWSL IT IEM E  PP  ++HPMRAIFMIPS+P PT  +P  WS E N+F+ RCLEK P+DRP++  ++  P+++  VE++ S      S ++++LV  H+  +   R+E +  K +  R
Sbjct:   72 FVVQYIGSYQEPEPDRIWIVMELCIAGSVNDLIHICQIRFNEEEIRVICASVLLGLHYLHINKMIHRDVKAGNILITDDGHIKLADFGVSAQLTSNQSKRRTVIGTPFWMAPEVISESSYDGKADIWSLGITMIEMAEMEPPYSNIHPMRAIFMIPSRPPPTFEKPENWSPEMNNFLARCLEKNPDDRPTAEQLMNDPFVSDIVEELDSSYKRGYSSLLEELVCSHIGEIDVVRKEEAANKGTKER 317          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: K8YWR4_NANGC (Serine/threonine kinase 3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWR4_NANGC)

HSP 1 Score: 248 bits (634), Expect = 6.030e-67
Identity = 133/277 (48.01%), Postives = 178/277 (64.26%), Query Frame = 3
Query: 1065 FQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPSKPSPTLSE-----PAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGEVGSPIIQDLVAKHLPVLTSFRE----------EASDAKASMARPDGEELSGSKTATLRRMNARGGDGYLG 1850
            F D E W++M+F  GGSV+D+L+A + TLSE + R   A   L L YLH N  +HRD+KAGNILL+++G+AKLADFGVS  +N   +K +T IGTPYWMAPEVIQE+ YDG+AD+WSL IT IEM EG PP  +VHPMRAIF+IPSKP P L++      + WS EF+DF+  CL K P  R ++ A+L HP++ A V+ +++R  +  +PI  DLV   L +L S+R           E   A+      DGEE +G    T +   +RG  G +G
Sbjct:   82 FVDAEIWIIMEFCMGGSVADMLDATQRTLSEPQIRSICACAALGLAYLHDNHNIHRDLKAGNILLSMNGKAKLADFGVSATLNHSMSKRKTVIGTPYWMAPEVIQEISYDGKADVWSLGITAIEMAEGMPPHFNVHPMRAIFLIPSKPPPQLAQRSTSGQSPWSQEFHDFLSVCLVKDPNQRANAAALLTHPFLKADVDFLRARPAQGLAPIA-DLVGSTLEILASYRRSSIAAAPTPMEEQFARTRPLEEDGEEENG---GTGKEHGSRGTSGSVG 354          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: A0A151ZSC9_9MYCE (Protein serine/threonine kinase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSC9_9MYCE)

HSP 1 Score: 242 bits (617), Expect = 8.530e-67
Identity = 116/199 (58.29%), Postives = 148/199 (74.37%), Query Frame = 3
Query: 1041 LLCDHVADFQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIP--SKPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWI 1631
            ++  H +  +DNE W+VM+F G GSV D ++    TL+E++    +   +  L YLHS RK+HRD+KAGNIL+ L+G +KLADFGVS +++TMA K QT IGTP+WMAPEVIQEV YD +ADIWS  ITCIEM E  PPL +VHPMR IFMIP  S+P P LSEP KWS +FNDFI +CL +KPE RPS+  +L+HP+I
Sbjct:   74 IVTYHASFKKDNEVWIVMEFCGAGSVCDAMKITNKTLTEDQISVVSRDVLQGLAYLHSVRKIHRDIKAGNILMNLNGESKLADFGVSSQLDTMA-KRQTVIGTPFWMAPEVIQEVGYDYKADIWSFGITCIEMAESKPPLFNVHPMRVIFMIPNPSRPPPKLSEPEKWSSDFNDFIAKCLTRKPELRPSAEELLKHPFI 271          
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Match: F4PQ05_CAVFA (Protein serine/threonine kinase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQ05_CAVFA)

HSP 1 Score: 242 bits (618), Expect = 1.150e-66
Identity = 129/271 (47.60%), Postives = 173/271 (63.84%), Query Frame = 3
Query: 1041 LLCDHVADFQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALDYLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTPYWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPS--KPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDIQSRGGEVGSPII--QDLV----AKHLPVLTSFREEASDAKASMARPDGEELSGSKTATLRRMNAR 1829
            ++  H +  +DNE W+VM++ G GSV D ++    TLSEE+    +   +  L YLHS RK+HRD+KAGNILL   G +KLADFGVS +++    K QT IGTP+WMAPEVIQEV YD +ADIWS  ITCIEM EG PPL +VHPMR IFMIP+  +P P LSEP +WS EFNDF+ +CL +KPE RPS+  +L+HP+I       ++RG  +  P+I  QD++     +   +    REE SD++         + SG    T+R +  R
Sbjct:   77 IITYHCSFRKDNEIWIVMEYCGAGSVCDAMKITTKTLSEEQIAVVSKDVLQGLAYLHSVRKIHRDIKAGNILLNNMGESKLADFGVSGQLSDTMAKRQTVIGTPFWMAPEVIQEVGYDYKADIWSYGITCIEMAEGKPPLFNVHPMRVIFMIPNPTRPPPKLSEPERWSNEFNDFLAKCLTRKPEQRPSADELLKHPFIT------RARGHNLLVPLIDEQDIIIGEKGREAALGLESREEESDSETDS------DASGGDMGTVRPLKPR 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUI5_9PHAE2.350e-18663.15Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G917_ECTSI3.620e-12177.04Protein serine/threonine kinase n=1 Tax=Ectocarpus... [more]
A0A835ZA30_9STRA8.820e-8570.37Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1UKA4_9STRA1.840e-7855.19Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A7S1G6G9_9STRA3.380e-7251.12Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3LJ83_9STRA1.420e-6856.99Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A7S2RNS6_9STRA4.730e-6746.34Hypothetical protein n=3 Tax=labyrinthulid quahog ... [more]
K8YWR4_NANGC6.030e-6748.01Serine/threonine kinase 3 n=3 Tax=Monodopsidaceae ... [more]
A0A151ZSC9_9MYCE8.530e-6758.29Protein serine/threonine kinase n=1 Tax=Tieghemost... [more]
F4PQ05_CAVFA1.150e-6647.60Protein serine/threonine kinase n=1 Tax=Cavenderia... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3044015..3051699 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score383.3
Seed ortholog evalue2.4e-103
Seed eggNOG ortholog2880.D7G917
KEGG koko:K04412
KEGG Pathwayko04010,ko04214,ko04390,ko04391,ko04392,map04010,map04214,map04390,map04391,map04392
KEGG ModuleM00683
EggNOG free text desc.hippo signaling
EggNOG OGsKOG0574@1,KOG0574@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01001
Hectar predicted targeting categoryother localisation
Exons11
Model size3399
Cds size2019
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.1753664-UTR-P-fluviatile_contig12:3044014..30447921622815527.1753664-UTR-P-fluviatile_contig12:3044014..3044792Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3044015..3044792 -
1693562138.5534272-UTR-P-fluviatile_contig12:3044014..30447921693562138.5534272-UTR-P-fluviatile_contig12:3044014..3044792Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3044015..3044792 -
1622815527.329703-UTR-P-fluviatile_contig12:3051097..30516991622815527.329703-UTR-P-fluviatile_contig12:3051097..3051699Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3051098..3051699 -
1693562138.6628962-UTR-P-fluviatile_contig12:3051097..30516991693562138.6628962-UTR-P-fluviatile_contig12:3051097..3051699Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 3051098..3051699 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.19089-CDS-P-fluviatile_contig12:3044792..30449451622815527.19089-CDS-P-fluviatile_contig12:3044792..3044945Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3044793..3044945 -
1693562138.56775-CDS-P-fluviatile_contig12:3044792..30449451693562138.56775-CDS-P-fluviatile_contig12:3044792..3044945Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3044793..3044945 -
1622815527.2037237-CDS-P-fluviatile_contig12:3046464..30469941622815527.2037237-CDS-P-fluviatile_contig12:3046464..3046994Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3046465..3046994 -
1693562138.5758955-CDS-P-fluviatile_contig12:3046464..30469941693562138.5758955-CDS-P-fluviatile_contig12:3046464..3046994Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3046465..3046994 -
1622815527.2158048-CDS-P-fluviatile_contig12:3047327..30474431622815527.2158048-CDS-P-fluviatile_contig12:3047327..3047443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3047328..3047443 -
1693562138.5834813-CDS-P-fluviatile_contig12:3047327..30474431693562138.5834813-CDS-P-fluviatile_contig12:3047327..3047443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3047328..3047443 -
1622815527.231271-CDS-P-fluviatile_contig12:3047879..30479651622815527.231271-CDS-P-fluviatile_contig12:3047879..3047965Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3047880..3047965 -
1693562138.591285-CDS-P-fluviatile_contig12:3047879..30479651693562138.591285-CDS-P-fluviatile_contig12:3047879..3047965Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3047880..3047965 -
1622815527.242376-CDS-P-fluviatile_contig12:3048202..30483191622815527.242376-CDS-P-fluviatile_contig12:3048202..3048319Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3048203..3048319 -
1693562138.600512-CDS-P-fluviatile_contig12:3048202..30483191693562138.600512-CDS-P-fluviatile_contig12:3048202..3048319Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3048203..3048319 -
1622815527.2584434-CDS-P-fluviatile_contig12:3048579..30486541622815527.2584434-CDS-P-fluviatile_contig12:3048579..3048654Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3048580..3048654 -
1693562138.6080759-CDS-P-fluviatile_contig12:3048579..30486541693562138.6080759-CDS-P-fluviatile_contig12:3048579..3048654Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3048580..3048654 -
1622815527.2707386-CDS-P-fluviatile_contig12:3048808..30489701622815527.2707386-CDS-P-fluviatile_contig12:3048808..3048970Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3048809..3048970 -
1693562138.615495-CDS-P-fluviatile_contig12:3048808..30489701693562138.615495-CDS-P-fluviatile_contig12:3048808..3048970Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3048809..3048970 -
1622815527.281847-CDS-P-fluviatile_contig12:3049314..30493891622815527.281847-CDS-P-fluviatile_contig12:3049314..3049389Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3049315..3049389 -
1693562138.62325-CDS-P-fluviatile_contig12:3049314..30493891693562138.62325-CDS-P-fluviatile_contig12:3049314..3049389Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3049315..3049389 -
1622815527.2928576-CDS-P-fluviatile_contig12:3049700..30497751622815527.2928576-CDS-P-fluviatile_contig12:3049700..3049775Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3049701..3049775 -
1693562138.6311407-CDS-P-fluviatile_contig12:3049700..30497751693562138.6311407-CDS-P-fluviatile_contig12:3049700..3049775Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3049701..3049775 -
1622815527.303542-CDS-P-fluviatile_contig12:3049944..30501061622815527.303542-CDS-P-fluviatile_contig12:3049944..3050106Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3049945..3050106 -
1693562138.6391506-CDS-P-fluviatile_contig12:3049944..30501061693562138.6391506-CDS-P-fluviatile_contig12:3049944..3050106Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3049945..3050106 -
1622815527.3181326-CDS-P-fluviatile_contig12:3050629..30510971622815527.3181326-CDS-P-fluviatile_contig12:3050629..3051097Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3050630..3051097 -
1693562138.6509202-CDS-P-fluviatile_contig12:3050629..30510971693562138.6509202-CDS-P-fluviatile_contig12:3050629..3051097Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3050630..3051097 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1562.1prot_P-fluviatile_contig12.1562.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 3044793..3051097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1562.1

>prot_P-fluviatile_contig12.1562.1 ID=prot_P-fluviatile_contig12.1562.1|Name=mRNA_P-fluviatile_contig12.1562.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=673bp
MKHVSEANLTGPQNYLQTNSPCWHFSAQRSFSTRRPPRLHKASQWSVGWA
GHCVVAVGATNNSHYRWSGFWYPSNLQASKFMGSNTTVSDFFSQKRVISF
TCVLAGGKRLVRVYIAGKSWPKLCKQQKLSISTAGGWEWGPNGERNLLCD
HVADFQDNEAWLVMDFVGGGSVSDILEACEVTLSEEEARECTAWTVLALD
YLHSNRKLHRDVKAGNILLTLDGRAKLADFGVSKEVNTMANKAQTAIGTP
YWMAPEVIQEVPYDGQADIWSLAITCIEMVEGNPPLHSVHPMRAIFMIPS
KPSPTLSEPAKWSLEFNDFIGRCLEKKPEDRPSSRAILRHPWIAARVEDI
QSRGGEVGSPIIQDLVAKHLPVLTSFREEASDAKASMARPDGEELSGSKT
ATLRRMNARGGDGYLGNGSPGARFSGANPTKTDATEMSPEQRELAASIFA
SAGEGEDGGSSSDGSVIRVPKSGGDEDEAGQDEDDGYSSSRSVNRAYASK
AACSQSADEDDDCSSDGSVIRVPAHSAEVDSGVEDQSRNVAGNDGVEKAR
SAAELGNGDNDATAAELVSTGNAPAHMKLNLLAASKYFSPKGGGSHCGVG
AGTEAQRNGSAMVLRTEVDNPQVKILLDELRRLDVSFAEDQAQLRRTYDT
KKANIQAQLRVLLDSQKRVAGV*
back to top

mRNA from alignment at P-fluviatile_contig12:3044015..3051699-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1562.1 ID=mRNA_P-fluviatile_contig12.1562.1|Name=mRNA_P-fluviatile_contig12.1562.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7685bp|location=Sequence derived from alignment at P-fluviatile_contig12:3044015..3051699- (Porterinema fluviatile SAG_2381)
CTGCCGACTTGATGAAGGAGGTTGATATCATGATGGCCTGCACGAGCCCG TATATTGTGCGCCTTCATGACTGCTATTACAAGGTACGTGATCAAGCCGT CGTTCGTCTAATATTTAAAAATCATAACACTCACATCCGTTCTGAGGACC CGCCGGTCAAGACTTTGCGGACGGGCGTCGTCATAACACTAGGGCGTGTG CATTGCTGTCTATGTTTACATCCACATAGTGAATGCCGCATCCCCGAGTT TGGAACAACTCGAAGGAGGAGATAGTTCGTAGGATGCGGGAAACTTCGGA ACTTCCAATGAGGCATTGAATCATCACTACGACAGCATTTCTGGGCCCTG GTCATCGCTACCGGGTGAACAGGGACGGTTGCCGATACAGACCCGGTCAA ACCCTGTGCGCACCTTCAATCATATTCCTTGTTGCGAACAGTATCGGCCG CTAGGAAAGTGCCGGTCTTCTTGCCGCACGCAGACCGGCATTGCCTGGGT CGACCCAATGCTGCACCGTTTGGGACATACGGCTGGGACAGACACAGTTT TTGAACGCCTCAATGAGATTCGCTTTCGCCGTGGTAAAACTTTTGGGATG ATATGAAACACGTGTCTGAAGCAAACCTGACGGGCCCTCAGAATTACTTG CAAACCAACTCCCCGTGTTGGCACTTTTCAGCTCAACGTTCGTTTTCCAC AAGACGACCTCCCAGACTTCACAAAGCTAGCCAGTGGTCTGTAGGATGGG CAGGGCATTGCGTCGTCGCTGTCGGAGCGACAAATAATTCCCATTACAGG TGGTCTGGTTTTTGGTATCCAAGTAACCTTCAAGCAAGCAAGTTCATGGG TTCGAATACAACCGTGAGCGACTTTTTCTCACAAAAACGAGTTATTTCTT TCACTTGCGTTCTTGCTGGTGGAAAGCGCCTAGTGCGTGTGTACATTGCG GGAAAGAGTTGGCCGAAACTCTGCAAGCAACAAAAACTGTCAATCAGCAC CGCAGGAGGATGGGAGTGGGGGCCTAACGGAGAGAGGAACCTTCTGTGCG ACCACGTTGCAGATTTTCAGGCAAGATGCCCCGGGTGGCAAGGCGCCCTT CGAACTCTGGAAAAAAATGTGACCACAAAAAAAGTACTTTGTATGTATAT TTTCATGACACGAGTGCGGGACCAGATGGATGGTCAATCAGCACGCAGGA GGATGGGAGTGGGGGCCTAAGGGAGAGAGGAACCTTCTGTGCGACCACGT TTCAGATGTTCAGGCAAGATGCCCCGTGTGGCAAGGCGCCCTTCGAACTC TGGAAATAAATGTGATCGCAAAAAAAAGTACTTTGTATGTGTATTTGCAT AACAGGAGTTCGGGACCAGATGGATGGTTTCAGACAGGTCTTCGCATTCC TGGCCTACAAGTCAACTTACCATTATGTTGCACTAGTATTCGATACTGGT GAACCAGCATGGAAGTGAACTGCGCCTGCCCTCAGATTGACAGCAGATGT CAACTCTCGGATCAACTGCCAGAGCCTTGTGATGTTACTGAACATTTTCA ACATTTTTTTTTGCCGCTGCCCCTTATTACACTTTCGCCACAGGATAACG AAGCCTGGCTGGTCATGGACTTTGTGGGTGGCGGGAGCGTGAGCGACATT CTCGAGGCTTGCGAAGTGACTTTGTCGGAGGAGGAGGCAAGAGAGTGCAC CGCGTGGACAGTCCTTGCTCTGGACTACTTGCACAGCAACAGGAAGTTGC ATCGGGTAAGGAGAGGCTCGACGTGGGAAACATTCATTCGTTCGAGCGTG ACGCTGAGCAGATGTTGGCCTGTGTCGCGACCAAAGGCCCTCCGAGTCGA TGTTTCGGTAGTTGCTGCGCATTTTATTTCGCGATTGAATATTTGTACTA TTGATACATTTTATCTTCCTACAGGATGTGAAGGCGGGAAACATCCTTCT GACGCTGGACGGCAGGGCAAAACTAGCGGATTTCGGCGTTTCGAAAGAGG TAGGCCGTCGACTTGCACCGATCGCTGCTGCTGGAAAACATTTTGATGTT CATGTCCGTACAGCGTTCAGAGCATCGCCTCACCCAACAGATGAGCGATA GTCGCCTTTTGGGTTTCAGCACGCGCTATTTTTCGCATTTCTGCTTAGCG CGATCCTCACCCACTTCTCCTCGTCGCGAGATACCGATAGTTGTTTTCGT TGTCATGACGTGTACGCAGCACGTGTCCATCTTTCGAGCCGGGATATGTC TACTTTGTTTTTGTTTTGCATACCCCACACCCTTTGTCTTTGCCTCCTCG TGCTCACAAGGTCAATACGATGGCAAACAAGGCGCAGACAGCGATTGGCA CGCCATATTGGATGGCCCCTGAAGTCATTCAGGAGGTATGTCGCAATTTC TTGTGGTTGATGCGAATCGTTGGGAGAAATTCGTCGATTATCGCAAAAGC CCCGATGATCATGCTCTCGCTATGAGATGGAATTCTACGAAGAGAATTTC GCAGTTTCCCCGGCACTAATTCTACGGCGTACCTGCCTCCGTCAAACCTC ACGGCCGAAAACTTTGTGGACCCGTGTCAAATACTCTCGCGTGTGAGCAG GGTGTCCTCAGCGATGATCGCTATTTCGCACTCCTTCCCCCCGCGTCGAA TTTCTTTGGGACTGCCCGCCGGTCGGAGAACGATTGCGTCAGCATACCGT TCAAAACTCTTTCTTCATACGCGTGCCAGGTTCCCTACGATGGCCAGGCT GATATTTGGTCTCTGGCGATTACGTGCATCGAGATGGTGGAGGGCAACCC GCCCTTGCACAGTGTACATCCAATGCGAGCTATCTTCATGATACCATCCA AACCGAGCCCGACGTTGTCCGAGCCTGCGAAATGGTCGCTGGTGAGTGGG CAGCTCGGTGAAAGTGTTGATTTTAGCATGCGATACCTGCTCGTATACTC TAAACTATATTTTTACCTCAGAGGCCATACTGTGCTCCACGTTTCTATTT TCTCATCCATGTCCTCGTTGGGTTTTGTTTGGCACATTTCGGCAGGAGTT CAACGACTTCATAGGTCGATGTCTGGAGAAGAAACCGGAAGACCGCCCTT CGTCACGGGCCATTCTACGGGTCAGTACAGTTAGAATTGTACACGGAGTG CCGCGTATCTTAGCAGTTGACGTTGCATTGGATCCTCCCGATAAGCATGT CGGCGAATGGCAAGACGTAGTGCCCTGTTTCTTGGGACGGATTGCGCAAC CAATGTCCCTGCCCCCTTGCGTCCTCAATCCTGATGCAGCTTGCTGTTTA ATGGGTACAGGAGAAACGTGGTATTTTCTTGAATGCATCCGCCATTCGTC GGTCGATGTTCAACTCGTTTATCATCGCAGCATCCTTGGATTGCGGCAAG GGTGGAGGACATCCAATCTCGTGGGGGAGAGGTCGGGTCCCCCATCATCC AGGACTTGGTTGCCAAACATCTACCAGTGTTGACAAGCTTCCGAGAGGTG AGCGCTCGCGCTCCTATGGCCTTCAGAATAACAATCCTCTCTGAGGTACT GATCGCCTCGCGCCCATCAAAAACACTCACCATTCCACCGCAACATACTC CAGCATCAATGATGAAGCGCGATATCTGTAGCGGCAAACCAGCGTCTGAG CACGCGGACAAGTTCGCCCGGCGTGTGCTTGATGAAAGCACTCGTCGCTT CACACATGCAACACTGCCCTGCTTCTGGGTACAGGAAGCGAGTGATGCCA AGGCCAGCATGGCCAGACCAGACGGCGAGGAGCTCAGTGGCAGCAAGACG GCAACCTTGCGACGAATGAAGTGAGCGACTCGAGTACTCTCCTGTTTGGT TGTAGTTTCAGCCGACAAAAAAGAGCAGACCAATTATGCCGTCGAAAATC ATGGCCTCTAGCAGCGATCCTTTTTTGTGCCAAGAGGACGGTGACCTGCG TGGAGATCTGTAGATTTGGTACCAGCCAGTCGACATGGGACACCGACCTC GTTGACCAGTACCAGGTACAATTTGGTACCATCGCACGGGATACTCTTCT AGTTTTGGCTTGTTCGGATGAGGGCAGTCGATTCTACGCAATGTGCTGGT TAATTGCCGAGCCCTCCTCCCCAGCGCCTACTCCAAGCCAGTTATTTTCC GCCCGAAGCACGACAGGGCACGAAGGCCTTGCTTGCCTTTTGCCGGCCAA AAATACCTCGTTGTGCGATGATGAACCAGTACCTTCTTGTCTGCTCCCGA CAGCAGCGCAAGGGGTGGAGACGGCTATCTTGGCAACGGGTCGCCCGGCG CAAGATTTTCTGGTGCCAATCCAACCAAAACCGACGCAACTGAGATGTCG CCGGAACAACGGGAACTTGCCGGTATGAACCCGAAGGGTTTGTAGTAGAA TTCCACGAGTAGCGGCAGGCGCAGAAAGCAGTTTACATATATTCAAAATC GTGTGTGCAATCTTCGTGTAGCCGTCAGATTAAGAAAGATGAACTACAGG GTCAGGATAGGGTGATCACAACCTTCGTGATAGGCAACCTTAGAGTTTTG CCACTTCATACGGTACCGTTTTTCCTTTGTGTTCTAGCTGTATCTGATGG TTACCAGCTGCTCGTGTTTGATAACATCCTTCACACGAGTGTACGCGATC TTTCGCGATCCGCCTACTTGTGCGGCAACTTCGAAAATACAACACGCCCC AACAGCGTCAATTTTCGCTTCAGCAGGCGAAGGCGAGGATGGTGGGAGTA GTTCAGATGGCAGCGTCATCAGAGTCCCCAAAAGTGGTGGCGACGAGGAC GAGGCAGGCCAGGACGAGGACGACGGGTACAGTTCAAGCCGGAGCGTAAA CCGAGCTTACGCCAGCAAAGCCGCGTGCAGTCAAAGTGCCGATGAGGACG ATGACTGCAGCTCAGATGGTAGCGTGATCAGAGTGCCAGCACACTCGGCG GAGGTTGACAGTGGTGTGGAAGACCAGTCACGAAATGTAGCAGGGAACGA TGGAGTTGAAAAAGCACGTTCAGCAGCAGAGCTGGGTAATGGCGACAACG ATGCAACCGCGGCGGAGCTGGTCAGCACCGGCAATGCGCCAGCACACATG AAGCTGAACCTGCTGGCGGCAAGCAAGTATTTTAGCCCAAAAGGGGGAGG TTCGCATTGCGGTGTTGGCGCCGGAACAGAAGCACAGCGAAACGGATCAG CAATGGTTTTGCGAACTGAAGTGGACAATCCTCAGGTATGTCCACCATCA ATGCCTTCACTCCCCCTGCCTTCGATCCCCGGACTTTTTGCTCCACATGA CCATGAAAGTTGCTTCTGAAACTGAAAATTGCTACAGTTTGTGGCCTCTC AACCCGTTTTTTGCCCCCACTGTGCTCGTGACTCCGACATATTCATCTAG CTCTACACTCGAACTTCAGCATGGGGGTGACATGGGGGTGAGACGGTTTT CATCATCCGCATGCGCGCACGCAATCTCATGATGAGAGCTTAAGCAACAA ATTCACGGCGCGTCACCATGTCTGATGTTTGTTGCTATACCTTCTTTCCG CCAGTCCGTCTCCACCCTGCCATTCGATTTTTAGCATCTTGTGTTGGCGG CGTCCGAAACATGCTAATTTGCCCGGGGTGCAGACACGGGTTTGACGATC CTAAACCCAACCTGAAAAAATGGCACCCATGAATACTAAATAGCCCGCTG TAGGATTTCCGAGCTGACGTGTGGTTTCAGCAGAGTAGAGGCGACGTGTG TTTCCACGCTCAGAACCGCTCCTGGGGCGGAGATTAACGAGGCCGCGGCA AAGTCTCAACCCCCCCGCACTCTCGTATAAAACCAATGGTTTGACGCGGC TGTACTCGCCGCCATGAGCGCTAATTTTAAATCTGTGGTTCATCCGGGGC CGCTAGTGGCGCCGCTGCTGCTCCAGATCCGCAGTTCAAGAGGTTCGCTG TTGTGGCGATTAGAAGAGGACGTTTGTTGGCTTCAAATCAGTTTACAAAA TCTTGGGAGCGATTGCAGCGGTGTATGGCATCTGGACGCTGCTGCGGAGT GCGTCGATTGATGAAGTTTGATAGGTTATAAATCCTCCGAAGTCCCACCG CATGTGAGCCTAAACCGTTTCGGCTTGTCTTGATGTGATGTACGTAAAAA ACTGATGCCCGTCATCGCCGCTCTGTGCGATAATCAACGACTTCATCATC GCACCACGCTTTCCTAATAGTGTGCCTTCACCAGTGTGTGTGATTGCTGG GGCCCCTTTCGCTTGTTGTTCAAAATAAGTCAACACCCGAAATCGGTTGA CAGGGGACCATCATTGCTCTTTCCTCTCGCCTTTTCATTTGGCGTCTTTG AAGCCGTTGGCGGTTTGGTGGTGTGGGTATTGATTTCCTGCAGAATGACT GATCTGAGTGTCGACCTCACGGGGATGTTCGTATGATGTACTGAGACAAG TGTGTAACACCCACGAGCTCGTTACACATGGTATTTTCGGTAGATGCTGT GAAGAGGTGAGACCACTGAAGTAGATTATTCGTTCCAAGATGACCACCTT TGCAAGAGTACAGCCTCATAGGGTGACTGCACGCTTAGTCCCGGCTGTCT ACCTGGGATGCGAGGTCAAATGGTGTGACGACGGCATCTGTCTGGGATGG CATTCATGTCTTGATGTTTACACTACATTTCATGGCATTCTTGACTTCAC TTTGAAATGGCACTTGACTCGAGATTTCCTGACATTTCCTTGCCGCTTTC TCAGGTGAAGATATTGCTTGACGAGTTACGACGCTTAGACGTTTCATTCG CCGAAGACCAAGCCCAACTTAGGCGTACCTACGACACGAAGAAGGCCAAT ATCCAAGCACAACTCAGGGTTTTGTTGGACAGCCAAAAAAGGGTGGCTGG TGTTTAAAGACGTATATTAAAAGTGGCCTGAACATCTCAGGTTCGTGTCT TTTAGAAGCGTGATTTCTTGGAGACTACGAATGGGTCGCAGTCAGCGCAC CTAACCACAACAAAAAGGGATGGTCTCGGCTAGTTGTTTGTTCTTTTTCT TGAATCAGACATTGACGAGGACTTTGGTTTCGCGACCCGTGAACGATAAA AAGCCTCTGAAGCTGGAGAATGACCCCGACCTGTGAGTCGATTCCGGTGC TTTGTCGATTTTTTGTCCCCTGTTTACTAAGTGATGCAGTGCCGGCCCGC TCATCAGAAACATCTTCGTAAGAAACCGAGGCTCAGATTTTTAGCTTACC TAAGAAATATGCCGTGAGAAATTGCGTTTGTCGGCCGGAGCTACTACACC AAACCCTGCGTAGAAGCCAACGTTCAGTGGCGGGGGACATAGTAAGAAAT GAGCCTCGCTCGAATTAAGTGTTTCGTACGAGCGGGCCGGCGCTGTAGTT TAAAACGGAGTTTGTTTTCCCGACCCGTGAACGATAAAACACTTACGAAG CTTGAGAATGAATCTGACTTATGCGTCGATTGCGGATGTTGTTGTTGTTG TTGTCACATTAAAAAACCTCCCAATCACTTCTCAGTCCCCGCGAATGTCC GTGCTGATCCACCCTATCGAGTCGACTTCCGTGGTCACAGGCTAAGAAAA AGTACCAAAAAATAACAAAAGTTCTCCCCACATCCGTACTCGGCCCGCAT GCTCCATGTCCGGGTTTCATCGGCCAAACCCGCCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig12:3044015..3051699-

>mRNA_P-fluviatile_contig12.1562.1 ID=mRNA_P-fluviatile_contig12.1562.1|Name=mRNA_P-fluviatile_contig12.1562.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4038bp|location=Sequence derived from alignment at P-fluviatile_contig12:3044015..3051699- (Porterinema fluviatile SAG_2381)
ATGAAACACGTGTCTGAAGCAAACCTGACGGGCCCTCAGAATTACTTGCA
AACCAACTCCCCGTGTTGGCACTTTTCAGCTCAACGTTCGTTTTCCACAA
GACGACCTCCCAGACTTCACAAAGCTAGCCAGTGGTCTGTAGGATGGGCA
GGGCATTGCGTCGTCGCTGTCGGAGCGACAAATAATTCCCATTACAGGTG
GTCTGGTTTTTGGTATCCAAGTAACCTTCAAGCAAGCAAGTTCATGGGTT
CGAATACAACCGTGAGCGACTTTTTCTCACAAAAACGAGTTATTTCTTTC
ACTTGCGTTCTTGCTGGTGGAAAGCGCCTAGTGCGTGTGTACATTGCGGG
AAAGAGTTGGCCGAAACTCTGCAAGCAACAAAAACTGTCAATCAGCACCG
CAGGAGGATGGGAGTGGGGGCCTAACGGAGAGAGGAACCTTCTGTGCGAC
CACGTTGCAGATTTTCAGATGAAACACGTGTCTGAAGCAAACCTGACGGG
CCCTCAGAATTACTTGCAAACCAACTCCCCGTGTTGGCACTTTTCAGCTC
AACGTTCGTTTTCCACAAGACGACCTCCCAGACTTCACAAAGCTAGCCAG
TGGTCTGTAGGATGGGCAGGGCATTGCGTCGTCGCTGTCGGAGCGACAAA
TAATTCCCATTACAGGTGGTCTGGTTTTTGGTATCCAAGTAACCTTCAAG
CAAGCAAGTTCATGGGTTCGAATACAACCGTGAGCGACTTTTTCTCACAA
AAACGAGTTATTTCTTTCACTTGCGTTCTTGCTGGTGGAAAGCGCCTAGT
GCGTGTGTACATTGCGGGAAAGAGTTGGCCGAAACTCTGCAAGCAACAAA
AACTGTCAATCAGCACCGCAGGAGGATGGGAGTGGGGGCCTAACGGAGAG
AGGAACCTTCTGTGCGACCACGTTGCAGATTTTCAGGATAACGAAGCCTG
GCTGGTCATGGACTTTGTGGGTGGCGGGAGCGTGAGCGACATTCTCGAGG
CTTGCGAAGTGACTTTGTCGGAGGAGGAGGCAAGAGAGTGCACCGCGTGG
ACAGTCCTTGCTCTGGACTACTTGCACAGCAACAGGAAGTTGCATCGGGA
TAACGAAGCCTGGCTGGTCATGGACTTTGTGGGTGGCGGGAGCGTGAGCG
ACATTCTCGAGGCTTGCGAAGTGACTTTGTCGGAGGAGGAGGCAAGAGAG
TGCACCGCGTGGACAGTCCTTGCTCTGGACTACTTGCACAGCAACAGGAA
GTTGCATCGGGATGTGAAGGCGGGAAACATCCTTCTGACGCTGGACGGCA
GGGCAAAACTAGCGGATTTCGGCGTTTCGAAAGAGGATGTGAAGGCGGGA
AACATCCTTCTGACGCTGGACGGCAGGGCAAAACTAGCGGATTTCGGCGT
TTCGAAAGAGGTCAATACGATGGCAAACAAGGCGCAGACAGCGATTGGCA
CGCCATATTGGATGGCCCCTGAAGTCATTCAGGAGGTCAATACGATGGCA
AACAAGGCGCAGACAGCGATTGGCACGCCATATTGGATGGCCCCTGAAGT
CATTCAGGAGGTTCCCTACGATGGCCAGGCTGATATTTGGTCTCTGGCGA
TTACGTGCATCGAGATGGTGGAGGGCAACCCGCCCTTGCACAGTGTACAT
CCAATGCGAGCTATCTTCATGATACCATCCAAACCGAGCCCGACGTTGTC
CGAGCCTGCGAAATGGTCGCTGGTTCCCTACGATGGCCAGGCTGATATTT
GGTCTCTGGCGATTACGTGCATCGAGATGGTGGAGGGCAACCCGCCCTTG
CACAGTGTACATCCAATGCGAGCTATCTTCATGATACCATCCAAACCGAG
CCCGACGTTGTCCGAGCCTGCGAAATGGTCGCTGGAGTTCAACGACTTCA
TAGGTCGATGTCTGGAGAAGAAACCGGAAGACCGCCCTTCGTCACGGGCC
ATTCTACGGGAGTTCAACGACTTCATAGGTCGATGTCTGGAGAAGAAACC
GGAAGACCGCCCTTCGTCACGGGCCATTCTACGGCATCCTTGGATTGCGG
CAAGGGTGGAGGACATCCAATCTCGTGGGGGAGAGGTCGGGTCCCCCATC
ATCCAGGACTTGGTTGCCAAACATCTACCAGTGTTGACAAGCTTCCGAGA
GCATCCTTGGATTGCGGCAAGGGTGGAGGACATCCAATCTCGTGGGGGAG
AGGTCGGGTCCCCCATCATCCAGGACTTGGTTGCCAAACATCTACCAGTG
TTGACAAGCTTCCGAGAGGAAGCGAGTGATGCCAAGGCCAGCATGGCCAG
ACCAGACGGCGAGGAGCTCAGTGGCAGCAAGACGGCAACCTTGCGACGAA
TGAAGAAGCGAGTGATGCCAAGGCCAGCATGGCCAGACCAGACGGCGAGG
AGCTCAGTGGCAGCAAGACGGCAACCTTGCGACGAATGAACGCAAGGGGT
GGAGACGGCTATCTTGGCAACGGGTCGCCCGGCGCAAGATTTTCTGGTGC
CAATCCAACCAAAACCGACGCAACTGAGATGTCGCCGGAACAACGGGAAC
TTGCCGCGCAAGGGGTGGAGACGGCTATCTTGGCAACGGGTCGCCCGGCG
CAAGATTTTCTGGTGCCAATCCAACCAAAACCGACGCAACTGAGATGTCG
CCGGAACAACGGGAACTTGCCGCGTCAATTTTCGCTTCAGCAGGCGAAGG
CGAGGATGGTGGGAGTAGTTCAGATGGCAGCGTCATCAGAGTCCCCAAAA
GTGGTGGCGACGAGGACGAGGCAGGCCAGGACGAGGACGACGGGTACAGT
TCAAGCCGGAGCGTAAACCGAGCTTACGCCAGCAAAGCCGCGTGCAGTCA
AAGTGCCGATGAGGACGATGACTGCAGCTCAGATGGTAGCGTGATCAGAG
TGCCAGCACACTCGGCGGAGGTTGACAGTGGTGTGGAAGACCAGTCACGA
AATGTAGCAGGGAACGATGGAGTTGAAAAAGCACGTTCAGCAGCAGAGCT
GGGTAATGGCGACAACGATGCAACCGCGGCGGAGCTGGTCAGCACCGGCA
ATGCGCCAGCACACATGAAGCTGAACCTGCTGGCGGCAAGCAAGTATTTT
AGCCCAAAAGGGGGAGGTTCGCATTGCGGTGTTGGCGCCGGAACAGAAGC
ACAGCGAAACGGATCAGCAATGGTTTTGCGAACTGAAGTGGACAATCCTC
AGCGTCAATTTTCGCTTCAGCAGGCGAAGGCGAGGATGGTGGGAGTAGTT
CAGATGGCAGCGTCATCAGAGTCCCCAAAAGTGGTGGCGACGAGGACGAG
GCAGGCCAGGACGAGGACGACGGGTACAGTTCAAGCCGGAGCGTAAACCG
AGCTTACGCCAGCAAAGCCGCGTGCAGTCAAAGTGCCGATGAGGACGATG
ACTGCAGCTCAGATGGTAGCGTGATCAGAGTGCCAGCACACTCGGCGGAG
GTTGACAGTGGTGTGGAAGACCAGTCACGAAATGTAGCAGGGAACGATGG
AGTTGAAAAAGCACGTTCAGCAGCAGAGCTGGGTAATGGCGACAACGATG
CAACCGCGGCGGAGCTGGTCAGCACCGGCAATGCGCCAGCACACATGAAG
CTGAACCTGCTGGCGGCAAGCAAGTATTTTAGCCCAAAAGGGGGAGGTTC
GCATTGCGGTGTTGGCGCCGGAACAGAAGCACAGCGAAACGGATCAGCAA
TGGTTTTGCGAACTGAAGTGGACAATCCTCAGGTGAAGATATTGCTTGAC
GAGTTACGACGCTTAGACGTTTCATTCGCCGAAGACCAAGCCCAACTTAG
GCGTACCTACGACACGAAGAAGGCCAATATCCAAGCACAACTCAGGGTTT
TGTTGGACAGCCAAAAAAGGGTGGCTGGTGTTTAAGTGAAGATATTGCTT
GACGAGTTACGACGCTTAGACGTTTCATTCGCCGAAGACCAAGCCCAACT
TAGGCGTACCTACGACACGAAGAAGGCCAATATCCAAGCACAACTCAGGG
TTTTGTTGGACAGCCAAAAAAGGGTGGCTGGTGTTTAA
back to top