mRNA_P-fluviatile_contig12.1560.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: D7G913_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G913_ECTSI) HSP 1 Score: 638 bits (1645), Expect = 3.260e-212 Identity = 437/837 (52.21%), Postives = 507/837 (60.57%), Query Frame = 1
Query: 1 YFLPGGILDDHH---VIGGSLLDEIGXXXXXXXXXXSGNVKADLLPAKQIAVSRVVGAESRT----SALTSDVRIEPHQLHRKSTSIMSTSPTRLSVEGTNPMAKEFMPSGCSNLPDAAVAARPGGSHSAPRRPASEVTNRVFSAAVGSGVKPACLEQTPHTSLQQQLQKLPRPPGPIL----PPPATANASLGDRGQQHRPLQTGEKRASWPIRATVVPAPPGSRLPSKHRQGGHLPSPPGFPPRGVVQQRIPRVQGQASGASAVSSQRRDRVAPTKYHAGKFGHYAERAWDPNDRVPSSKAGAQFFGIAHSMRSQHWRNRNLAPVHHVQSPEQAENRTRTAAKTGISAGRYRGHDEAGIRTQGVGQDLAASKGLPSHRAQIQTXXXXXXXRPSVAVRRVPTGNTDHPGQDAFTKAPSRRRERFHDPSAQP-LGVLLPKATRDDVSEPSTTSPPPPEETCEWQPSLQAPAKLASTAEQQGTQSEQMPSDDXXXXXXXASSASSVLEQKLLSHRWNSST-RNAQQAKSEDEASGHSQSHVYKEKDKTRLKKKDDRAYRA-PSKQLLGTAAKEPNRAKAGMCSSLLSSLKLLCGFVRNLVVGIVATLLRMIACQLNRLRLVRRIVALMSFLASSGEFLLSVFIVSSSRFFLLGLRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVDVMFNSRLYHARYRSRMSLTSGFRAI 2469
YFLPGGILD HH +IGGSLLDEIG GNV A L PAKQ+A SR+VG+ RT +A SD R P Q HRK TS++ PTRLSVEGTNPMAKEF PS CS DAAV G H+ R PA E NRVFSAAVGS VK A E T++Q+Q + L PP P PA A SLGDR QQH Q G K WP+RATV + PG LPSKHR T AK G S GR HD+ R Q V Q A S+G +R Q Q VRRV G + P QDA TK SRR+E F D +AQP +G L A D +P +TS P E+ E P QA L+S+A++QG+ +E+ DD A+S+S +Q S R +SS R+++QA+ EDE++ H QSHV+KEKDK + KKKDDR YRA P+KQ+LGTA KEP+R K G SL ++L+ G++R+ +GIVA ++R IA QLNRLRLVRR++ L+SF ASS LLS I+S+S FLLGLRLHSLALKEITGS+HVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTS+HQ+KHSMS+HLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSF LAAVRLRCIFSPIFLLSW+ QVFALA+ GSS S+QY QVLVSLASLHAVSMVDVM NSR YHARYR+ MSLT+GFR +
Sbjct: 16 YFLPGGILDTHHEEDMIGGSLLDEIGGV---------GNVTA-LHPAKQMA-SRIVGSGPRTDLPPAATASDRR--PQQFHRKITSVIGGGPTRLSVEGTNPMAKEFTPSTCSIPADAAVELPTGSLHAHSRHPAPETVNRVFSAAVGSEVKTAAAELPYRTAMQRQSRNLQGPPXXXXXXXXPQPA-AQRSLGDRAQQHPRHQPGGK--PWPVRATVTHSHPGPTLPSKHRL------------------------------------------------------------------------------------------------------------TIAKGGSSTGRDHVHDDTVGRGQRVDQVQAVSRGPSRNRIQAQP-----------GVRRVSHGQANSPHQDASTKVSSRRQEDFVDHTAQPSVGSRLESARDDSSQQPMSTSLFPVEQGQEMLPP-QASNGLSSSAQRQGSHAERTARDDGEPSLP-ATSSSGTPQQSSSSGRMSSSNERSSRQARPEDESACHLQSHVHKEKDKGKFKKKDDRTYRAAPNKQVLGTAVKEPSRMKLGTRPSLSQKIRLMGGYLRSSSLGIVAAIVRTIAWQLNRLRLVRRMLTLVSFAASSSVSLLSAVILSTSWLFLLGLRLHSLALKEITGSIHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFTLAAVRLRCIFSPIFLLSWSCQVFALATCGSSASLQYGQVLVSLASLHAVSMVDVMLNSRFYHARYRAGMSLTNGFRTV 715
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A7S2Y1S5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S5_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.620e-35 Identity = 82/202 (40.59%), Postives = 110/202 (54.46%), Query Frame = 1
Query: 1918 RLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSM-------------------------------------------SAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
LH AL+E H+A CF FPY F+YLV A+ +WAPHW P CLWYSFL+Q+FC ++ + S L P R LLP+ + E SG S++L L GSELLLLSF LAAVR+RC+ SPIFL++W ++ A+++FG P +QY Q+L +L +L+ VS VD
Sbjct: 103 HLHKCALREALARPHIAFCFAFPYVFRYLVGALADWAPHWAPVCLWYSFLVQLFCHRQPRNPQAPLSQQXXXXXXXXXXXXXXXXXXSPDSQLEPVNGGGDDASPPEPSVTLQPIFRLLLPLLLIAEGASGHSFVLDLDGSELLLLSFFLAAVRMRCLTSPIFLVAWPLEILAVSAFGPLPVLQYCQLLFALTALYGVSAVD 304
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A7S2FCH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCH2_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.250e-33 Identity = 83/199 (41.71%), Postives = 113/199 (56.78%), Query Frame = 1
Query: 1903 FLLGLRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSM--------------------------------------SAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVS 2385
FL+ L+LH A++E + +VA CF+FP+ FQ+LVS + EWAPHW P CLWYSFL+Q+ CT S S +V R +LP+AF+ E SGR+ LL L G+ELL++SF LAAV+++CI SPIF++SWA QV A A+ G P +QY Q +++L SLH S
Sbjct: 355 FLMILQLHKYAVREALSNYNVAFCFVFPFNFQFLVSLVKEWAPHWAPVCLWYSFLIQLLCTRGKSSAPSTAGSDVTVGNTASGGMSSQANGTTTNATGGGGAVPSRGTSGGMVSVFRIVLPLAFVAEGVSGRTALLDLNGAELLVVSFLLAAVKMQCISSPIFMVSWAIQVLATAATGFHPVLQYCQFVLALTSLHICS 553
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A7S2B5U5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5U5_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.830e-32 Identity = 83/199 (41.71%), Postives = 113/199 (56.78%), Query Frame = 1
Query: 1903 FLLGLRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSM--------------------------------------SAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVS 2385
FL+ L+LH A++E + +VA CF+FP+ FQ+LVS + EWAPHW P CLWYSFL+Q+ CT S S +V R +LP+AF+ E SGR+ LL L G+ELL++SF LAAV+++CI SPIF++SWA QV A A+ G P +QY Q +++L SLH S
Sbjct: 687 FLMILQLHKYAVREALSNYNVAFCFVFPFNFQFLVSLVKEWAPHWAPVCLWYSFLIQLLCTRGKSSAPSTAGSDVTVGNTASGGMSSQANGTTTNATGGGGAVPSRGTSGGMVSVFRIVLPLAFVAEGVSGRTALLDLNGAELLVVSFLLAAVKMQCISSPIFMVSWAIQVLATAATGFHPVLQYCQFVLALTSLHICS 885
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A6G0X9R3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9R3_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.930e-24 Identity = 71/175 (40.57%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 1870 LSVFIVSSSRFFLLGLRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
L + +V S + GL+ H LA++ + + ++A CF F Y F LV + WA P CLWY+FL+Q+FCT S +V R LLP+ FL E S S+LL L G+ELLL+SF L+AV+ ++SP+F LS + Q + GS +Q+VQ+ V+L SLHA++ D
Sbjct: 661 LGIGVVMSYQLLTYGLKFHRLAVRGLVFNRNIASCFAFLYAFPLLVQYVIPWAXXXXPVCLWYAFLVQLFCTQG-------STAMVATFRILLPLVFLVEGVSHHSFLLDLNGAELLLISFILSAVKTGNLYSPVFFLSLSAQCLSAVFLGSELIVQWVQLAVALYSLHAMASGD 828
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A8J5M5U0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M5U0_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.850e-24 Identity = 65/160 (40.62%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 1915 LRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
+R+H +A + I H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIF LS A Q GS +Q++Q+ ++L SLH +++ D
Sbjct: 405 IRVHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVFLGSELLVQWLQLALALYSLHVMAVTD 557
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A225VDK5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VDK5_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.050e-24 Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 1915 LRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
+R+H ++ + I H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ S +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIFLLS A Q GS +Q++Q+ ++L SLH ++ D
Sbjct: 898 IRIHRVSFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------STAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFLLSLATQCLLAVFLGSELLVQWLQLALALYSLHIMAATD 1050
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: H3GEN9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEN9_PHYRM) HSP 1 Score: 118 bits (295), Expect = 6.420e-24 Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 1
Query: 1915 LRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
+R+H +A + I H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ +V R +LP+ FL E S S+LL L G+ELLL SF ++A++ + SPIF LS A Q GS +Q++Q+ ++L SLH ++ D
Sbjct: 297 IRIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLTSFIISALKTSNLCSPIFFLSLATQCLLAVFLGSELVVQWLQLALALYSLHVMATTD 449
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: D0NS48_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NS48_PHYIT) HSP 1 Score: 120 bits (302), Expect = 6.560e-24 Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 1915 LRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
+R+H +A + I H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIF LS A Q S GS +Q++Q+ ++L SLH +++ +
Sbjct: 884 IRIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVSLGSELLVQWLQLALALYSLHVMAVTE 1036
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Match: A0A0P1A945_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A945_PLAHL) HSP 1 Score: 120 bits (301), Expect = 8.650e-24 Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 1840 SFLASSGEFLLSVFIVSSSRFFLLGLRLHSLALKEITGSVHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSSHQHKHSMSAHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCIFSPIFLLSWAFQVFALASFGSSPSIQYVQVLVSLASLHAVSMVD 2394
S L SS ++S + S FF R+H +A + I H+ CF F Y F LV + WAP W P CLWY+FL+Q+FCT+ S +V R +LP+ FL E S S+LL L G+ELLL SF ++A+++ + SPIF LS A Q FGS +Q+ Q+ ++L SL+A++ D
Sbjct: 867 SMLLSSCRRIMSGSLHGISLFF----RVHRVAFRAILTHRHIGFCFSFLYGFPILVQYVLPWAPPWAPVCLWYAFLVQLFCTNG-------STAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLTSFIISALKINNLCSPIFFLSLAMQCLLAVFFGSELLVQWFQLTLALYSLYALAATD 1040 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1560.1 >prot_P-fluviatile_contig12.1560.1 ID=prot_P-fluviatile_contig12.1560.1|Name=mRNA_P-fluviatile_contig12.1560.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=752bp MSTSPTRLSVEGTNPMAKEFMPSGCSNLPDAAVAARPGGSHSAPRRPASEback to top mRNA from alignment at P-fluviatile_contig12:3022861..3033570- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1560.1 ID=mRNA_P-fluviatile_contig12.1560.1|Name=mRNA_P-fluviatile_contig12.1560.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10710bp|location=Sequence derived from alignment at P-fluviatile_contig12:3022861..3033570- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3022861..3033570- >mRNA_P-fluviatile_contig12.1560.1 ID=mRNA_P-fluviatile_contig12.1560.1|Name=mRNA_P-fluviatile_contig12.1560.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4512bp|location=Sequence derived from alignment at P-fluviatile_contig12:3022861..3033570- (Porterinema fluviatile SAG_2381)back to top |