mRNA_P-fluviatile_contig12.1559.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 615 bits (1585), Expect = 1.790e-206 Identity = 294/306 (96.08%), Postives = 296/306 (96.73%), Query Frame = 1
Query: 904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWFRAVGADTR 1821
LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGE LRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKY+MYDETGDVT HTGGWLIADGGYHRVPLLICPFKV ANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGI FGDRTKIDDAWFTACIIHNMLLAFDGLDQLE+DM WEGKDGEADST GVFPAVTVADSAED VSGDDDAAFHAHRQ LVDHFAFAKS SEVQWFRAVGADTR
Sbjct: 232 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRAVGADTR 537
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 582 bits (1500), Expect = 1.190e-197 Identity = 277/288 (96.18%), Postives = 280/288 (97.22%), Query Frame = 1
Query: 907 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFA 1770
MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKY+MYDETGDVT HTGGWLIA+GGYHRVPLLICPFKV ANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGI FGDRTKIDDAWFTACIIHNMLLAFDGLDQLE+DM WEGKDGEADST GVFPAVTVADSAED VSGDDDAAFHAHRQ LVDHFAFA
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFA 288
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 3.070e-134 Identity = 200/225 (88.89%), Postives = 202/225 (89.78%), Query Frame = 1
Query: 904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNML 1578
LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF AICDHAGRILASTKGYPGAENDKTVV YKY+MYDETGDVT HTGGWLIADGGYHRVPLLICPFKV ANVAEQQWSKRLESVRKD+ECLFGRLKGRFRLFKTGI FGDRTKIDDA FTACIIH ML
Sbjct: 27 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 4.440e-132 Identity = 197/292 (67.47%), Postives = 230/292 (78.77%), Query Frame = 1
Query: 904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVT-VADSAEDDVS-GDDDAAFHAHRQRLVDHFAFAK 1773
LMSR TAE+SFHRFC CF++GLW W+ LPEGE L++V Y +G PGAV S+DCTH+ W C FSET THKGKEGYTT+V+ A CDH+GRIL+STKG+PGAENDKTVV+RDLSV R+ EEPW SYK+ ++D G+ T HTGGWLI DGGYHRVP LICPFK A+ A+Q+WSKR ES+RKDIECLFGRLKGRFRLFKTGI FG R KID+AWFTACIIHNML FDGL LE D+ W GKDGEAD T G FP T V D+A ++V GD+ AF RQ+LV+H A+ K
Sbjct: 134 LMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGEEVDDGDNTEAFKLFRQQLVNHVAYKK 425
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.070e-90 Identity = 136/241 (56.43%), Postives = 169/241 (70.12%), Query Frame = 1
Query: 907 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEG 1629
MS TAE+SFH FC F+A LW TW++LP G++L+ VE +R GYPGA+ S DCTH W SE + GKEGY TVV A CDH GRI+A+TK YPG+ENDKT++QRD S+ R+ EEPW S KY +Y+ G T + G WL+ DGGY ++PLLI P K A V E WS+RLES+RKDIEC +GR+KGRFRLFK GI + R ID+ WFTACI+HNML +D LD + GW+G
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQG 241
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 275 bits (703), Expect = 1.920e-78 Identity = 131/250 (52.40%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 946 CHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAE 1695
C F+ GLW TW++LP G++L++VE YR GYPGA GS DCTH W C FSE TH GKEGYT++V CDH+GRI+A+TK PGAENDKTV+ RD S+ R+ EEPW SY +T W+I DGGY ++PLLI P K V E WS+RLES+RKDIEC FGR+KGR+RLF I F R K D+A FTACI+HNML +F+ LD++E D W G G V A+ V + +E
Sbjct: 90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGEAAAVAAAMDVDEESE 326
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 263 bits (672), Expect = 4.560e-76 Identity = 144/310 (46.45%), Postives = 183/310 (59.03%), Query Frame = 1
Query: 907 MSRTTAEQSFHRFCHCFAAGLWRTWIRLP--EGEDLRRVESTYRSLG--------YPGAVGSIDCTHVPWERCAF---SETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWF 1797
MSRTTAE SFH FC F+ GLW TW EG VE T+ G YPGA D T + ++ + E GKEGYT++V CDH+GRI+A+TK YPGAENDKTV+ R + R+ EEPW SYK+ +Y+ G T TG W+I DGGY ++PLLI P K V E WS+RLES+RKDIEC FGR+KG +RLF I F R K+D+AWFTACI+HNML +F+ LD++E D W G V A+ V + +E SG F R++L+ HFA A + E+ WF
Sbjct: 1 MSRTTAETSFHHFCEKFSEGLWDTWNTHTGKEGYTSLVVECTWGHSGRIIAATKTYPGAEN--DKTVIARDKFIWRIRDEEPWKXGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDADWMGSAARLREATAVGVAMDVDEESEPPTSG-----FEEFRRKLIAHFACAWEKKEILWF 303
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE) HSP 1 Score: 233 bits (595), Expect = 2.220e-65 Identity = 126/322 (39.13%), Postives = 165/322 (51.24%), Query Frame = 1
Query: 895 RKLLMSRTTAEQ--SFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGA------------------VGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWFR 1800
R+ L+S ++ SFH FC F+ GLW TW++LP G++ ++VE YR GYPGA TH GKEGYT++V CDH+GRI+A+TK YPGAENDK V+ RD S+ RV E+PW SYK+ +Y+ G T +TG W+I DGGY ++PLLI P K V E WS+RLES+RKDIEC FGR+KGR+ LF IFF LD++E D W G G V A+ V + +E F R++L+ HF A E WF+
Sbjct: 6 RRFLLSDEPHDRGDSFHHFCEKFSEGLWDTWVKLPGGDEFKKVEEIYRKCGYPGARKVXTTAETSXXXXXXXXXXXXXXXXXXXXXXXXXXXNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKGRWMLFSGDIFFNR-----------------------LDEMEEDADWVGSGGRLGEATTVAAAMDVGEESETPTP-----RFEESRKKLIAHFTCAWEEKETLWFK 299
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE) HSP 1 Score: 232 bits (591), Expect = 5.250e-65 Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 1
Query: 904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRV 1371
LMSR TAE+SFHRFC CF++GLW W+ LPEGE L++V Y + PG V S+DCTH+ C FSET THKGKEGYTT+V+ A CDH+GRIL+STKG+PGAENDKTVV+RDLSV R+ EEPW YK+ ++D G+ T HTGGWLI DGGYHRV
Sbjct: 122 LMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRV 277
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 229 bits (583), Expect = 5.600e-64 Identity = 128/327 (39.14%), Postives = 166/327 (50.76%), Query Frame = 1
Query: 904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHR----------------------------VPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWFR 1800
LMSRTTAE SFH FC F+ GLW TW++LP G++ ++ TH GKEGYT++V CDH+GRI+A+TK YPGAENDKTV+ RD S+ R+ EEPW SY +T W+I DGGY + +PLLI P K V E WS+RLES+RKDIEC FGR+KGR+RLF + F R K+D+AWFTACI+HNML +F+ LD++E D W G G V A+ V + +E G + F + E+ WF+
Sbjct: 21 LMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGEATAVAAAMDVDEESEAPTPG-------------FEEFRREWEKKEILWFK 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1559.1 >prot_P-fluviatile_contig12.1559.1 ID=prot_P-fluviatile_contig12.1559.1|Name=mRNA_P-fluviatile_contig12.1559.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=176bp MYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVback to top mRNA from alignment at P-fluviatile_contig12:2990886..2995658- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1559.1 ID=mRNA_P-fluviatile_contig12.1559.1|Name=mRNA_P-fluviatile_contig12.1559.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4773bp|location=Sequence derived from alignment at P-fluviatile_contig12:2990886..2995658- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2990886..2995658- >mRNA_P-fluviatile_contig12.1559.1 ID=mRNA_P-fluviatile_contig12.1559.1|Name=mRNA_P-fluviatile_contig12.1559.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1056bp|location=Sequence derived from alignment at P-fluviatile_contig12:2990886..2995658- (Porterinema fluviatile SAG_2381)back to top |