mRNA_P-fluviatile_contig12.1559.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1559.1
Unique NamemRNA_P-fluviatile_contig12.1559.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 615 bits (1585), Expect = 1.790e-206
Identity = 294/306 (96.08%), Postives = 296/306 (96.73%), Query Frame = 1
Query:  904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWFRAVGADTR 1821
            LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGE LRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKY+MYDETGDVT HTGGWLIADGGYHRVPLLICPFKV ANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGI FGDRTKIDDAWFTACIIHNMLLAFDGLDQLE+DM WEGKDGEADST GVFPAVTVADSAED VSGDDDAAFHAHRQ LVDHFAFAKS SEVQWFRAVGADTR
Sbjct:  232 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRAVGADTR 537          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 582 bits (1500), Expect = 1.190e-197
Identity = 277/288 (96.18%), Postives = 280/288 (97.22%), Query Frame = 1
Query:  907 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFA 1770
            MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKY+MYDETGDVT HTGGWLIA+GGYHRVPLLICPFKV ANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGI FGDRTKIDDAWFTACIIHNMLLAFDGLDQLE+DM WEGKDGEADST GVFPAVTVADSAED VSGDDDAAFHAHRQ LVDHFAFA
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFA 288          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 3.070e-134
Identity = 200/225 (88.89%), Postives = 202/225 (89.78%), Query Frame = 1
Query:  904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNML 1578
            LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF AICDHAGRILASTKGYPGAENDKTVV                 YKY+MYDETGDVT HTGGWLIADGGYHRVPLLICPFKV ANVAEQQWSKRLESVRKD+ECLFGRLKGRFRLFKTGI FGDRTKIDDA FTACIIH ML
Sbjct:   27 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 4.440e-132
Identity = 197/292 (67.47%), Postives = 230/292 (78.77%), Query Frame = 1
Query:  904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVT-VADSAEDDVS-GDDDAAFHAHRQRLVDHFAFAK 1773
            LMSR TAE+SFHRFC CF++GLW  W+ LPEGE L++V   Y  +G PGAV S+DCTH+ W  C FSET THKGKEGYTT+V+ A CDH+GRIL+STKG+PGAENDKTVV+RDLSV R+  EEPW SYK+ ++D  G+ T HTGGWLI DGGYHRVP LICPFK  A+ A+Q+WSKR ES+RKDIECLFGRLKGRFRLFKTGI FG R KID+AWFTACIIHNML  FDGL  LE D+ W GKDGEAD T G FP  T V D+A ++V  GD+  AF   RQ+LV+H A+ K
Sbjct:  134 LMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGEEVDDGDNTEAFKLFRQQLVNHVAYKK 425          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.070e-90
Identity = 136/241 (56.43%), Postives = 169/241 (70.12%), Query Frame = 1
Query:  907 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEG 1629
            MS  TAE+SFH FC  F+A LW TW++LP G++L+ VE  +R  GYPGA+ S DCTH  W     SE   + GKEGY TVV  A CDH GRI+A+TK YPG+ENDKT++QRD S+ R+  EEPW S KY +Y+  G  T + G WL+ DGGY ++PLLI P K  A V E  WS+RLES+RKDIEC +GR+KGRFRLFK GI +  R  ID+ WFTACI+HNML  +D LD +    GW+G
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQG 241          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 1.920e-78
Identity = 131/250 (52.40%), Postives = 163/250 (65.20%), Query Frame = 1
Query:  946 CHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAE 1695
            C  F+ GLW TW++LP G++L++VE  YR  GYPGA GS DCTH  W  C FSE  TH GKEGYT++V    CDH+GRI+A+TK  PGAENDKTV+ RD S+ R+  EEPW SY             +T  W+I DGGY ++PLLI P K    V E  WS+RLES+RKDIEC FGR+KGR+RLF   I F  R K D+A FTACI+HNML +F+ LD++E D  W G  G       V  A+ V + +E
Sbjct:   90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGEAAAVAAAMDVDEESE 326          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 4.560e-76
Identity = 144/310 (46.45%), Postives = 183/310 (59.03%), Query Frame = 1
Query:  907 MSRTTAEQSFHRFCHCFAAGLWRTWIRLP--EGEDLRRVESTYRSLG--------YPGAVGSIDCTHVPWERCAF---SETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWF 1797
            MSRTTAE SFH FC  F+ GLW TW      EG     VE T+   G        YPGA    D T +  ++  +    E     GKEGYT++V    CDH+GRI+A+TK YPGAENDKTV+ R   + R+  EEPW SYK+ +Y+  G  T  TG W+I DGGY ++PLLI P K    V E  WS+RLES+RKDIEC FGR+KG +RLF   I F  R K+D+AWFTACI+HNML +F+ LD++E D  W G          V  A+ V + +E   SG     F   R++L+ HFA A  + E+ WF
Sbjct:    1 MSRTTAETSFHHFCEKFSEGLWDTWNTHTGKEGYTSLVVECTWGHSGRIIAATKTYPGAEN--DKTVIARDKFIWRIRDEEPWKXGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDADWMGSAARLREATAVGVAMDVDEESEPPTSG-----FEEFRRKLIAHFACAWEKKEILWF 303          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.220e-65
Identity = 126/322 (39.13%), Postives = 165/322 (51.24%), Query Frame = 1
Query:  895 RKLLMSRTTAEQ--SFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGA------------------VGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWFR 1800
            R+ L+S    ++  SFH FC  F+ GLW TW++LP G++ ++VE  YR  GYPGA                                      TH GKEGYT++V    CDH+GRI+A+TK YPGAENDK V+ RD S+ RV  E+PW SYK+ +Y+  G  T +TG W+I DGGY ++PLLI P K    V E  WS+RLES+RKDIEC FGR+KGR+ LF   IFF                         LD++E D  W G  G       V  A+ V + +E          F   R++L+ HF  A    E  WF+
Sbjct:    6 RRFLLSDEPHDRGDSFHHFCEKFSEGLWDTWVKLPGGDEFKKVEEIYRKCGYPGARKVXTTAETSXXXXXXXXXXXXXXXXXXXXXXXXXXXNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKGRWMLFSGDIFFNR-----------------------LDEMEEDADWVGSGGRLGEATTVAAAMDVGEESETPTP-----RFEESRKKLIAHFTCAWEEKETLWFK 299          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 5.250e-65
Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 1
Query:  904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHRV 1371
            LMSR TAE+SFHRFC CF++GLW  W+ LPEGE L++V   Y  +  PG V S+DCTH+    C FSET THKGKEGYTT+V+ A CDH+GRIL+STKG+PGAENDKTVV+RDLSV R+  EEPW  YK+ ++D  G+ T HTGGWLI DGGYHRV
Sbjct:  122 LMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRV 277          
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 5.600e-64
Identity = 128/327 (39.14%), Postives = 166/327 (50.76%), Query Frame = 1
Query:  904 LMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVF*AICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYDMYDETGDVTGHTGGWLIADGGYHR----------------------------VPLLICPFKVCANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQRLVDHFAFAKSRSEVQWFR 1800
            LMSRTTAE SFH FC  F+ GLW TW++LP G++ ++                                 TH GKEGYT++V    CDH+GRI+A+TK YPGAENDKTV+ RD S+ R+  EEPW SY             +T  W+I DGGY +                            +PLLI P K    V E  WS+RLES+RKDIEC FGR+KGR+RLF   + F  R K+D+AWFTACI+HNML +F+ LD++E D  W G  G       V  A+ V + +E    G              + F     + E+ WF+
Sbjct:   21 LMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGEATAVAAAMDVDEESEAPTPG-------------FEEFRREWEKKEILWFK 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE1.790e-20696.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE1.190e-19796.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JY35_9PHAE3.070e-13488.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE4.440e-13267.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K604_9PHAE1.070e-9056.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7N8_9PHAE1.920e-7852.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU81_9PHAE4.560e-7646.45DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K4F4_9PHAE2.220e-6539.13DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K8G0_9PHAE5.250e-6565.38DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KVL5_9PHAE5.600e-6439.14DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2990886..2995658 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.8
Seed ortholog evalue1.3e-21
Seed eggNOG ortholog2880.D7FSK2
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size3392
Cds size528
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1559.1prot_P-fluviatile_contig12.1559.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 2992680..2993715 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.682884-UTR-P-fluviatile_contig12:2990885..29917351622815526.682884-UTR-P-fluviatile_contig12:2990885..2991735Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2990886..2991735 -
1693562137.4435833-UTR-P-fluviatile_contig12:2990885..29917351693562137.4435833-UTR-P-fluviatile_contig12:2990885..2991735Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2990886..2991735 -
1622815526.6936939-UTR-P-fluviatile_contig12:2991961..29926791622815526.6936939-UTR-P-fluviatile_contig12:2991961..2992679Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2991962..2992679 -
1693562137.456606-UTR-P-fluviatile_contig12:2991961..29926791693562137.456606-UTR-P-fluviatile_contig12:2991961..2992679Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2991962..2992679 -
1622815526.7245908-UTR-P-fluviatile_contig12:2993715..29941671622815526.7245908-UTR-P-fluviatile_contig12:2993715..2994167Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2993716..2994167 -
1693562138.2840803-UTR-P-fluviatile_contig12:2993715..29941671693562138.2840803-UTR-P-fluviatile_contig12:2993715..2994167Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2993716..2994167 -
1622815526.7349663-UTR-P-fluviatile_contig12:2994814..29956581622815526.7349663-UTR-P-fluviatile_contig12:2994814..2995658Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2994815..2995658 -
1693562138.2976878-UTR-P-fluviatile_contig12:2994814..29956581693562138.2976878-UTR-P-fluviatile_contig12:2994814..2995658Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 2994815..2995658 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.7031846-CDS-P-fluviatile_contig12:2992679..29931351622815526.7031846-CDS-P-fluviatile_contig12:2992679..2993135Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2992680..2993135 -
1693562137.4674702-CDS-P-fluviatile_contig12:2992679..29931351693562137.4674702-CDS-P-fluviatile_contig12:2992679..2993135Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2992680..2993135 -
1622815526.7144728-CDS-P-fluviatile_contig12:2993643..29937151622815526.7144728-CDS-P-fluviatile_contig12:2993643..2993715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2993644..2993715 -
1693562137.4766448-CDS-P-fluviatile_contig12:2993643..29937151693562137.4766448-CDS-P-fluviatile_contig12:2993643..2993715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2993644..2993715 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1559.1

>prot_P-fluviatile_contig12.1559.1 ID=prot_P-fluviatile_contig12.1559.1|Name=mRNA_P-fluviatile_contig12.1559.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=176bp
MYDETGDVTGHTGGWLIADGGYHRVPLLICPFKVCANVAEQQWSKRLESV
RKDIECLFGRLKGRFRLFKTGIFFGDRTKIDDAWFTACIIHNMLLAFDGL
DQLEIDMGWEGKDGEADSTKGVFPAVTVADSAEDDVSGDDDAAFHAHRQR
LVDHFAFAKSRSEVQWFRAVGADTR*
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mRNA from alignment at P-fluviatile_contig12:2990886..2995658-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1559.1 ID=mRNA_P-fluviatile_contig12.1559.1|Name=mRNA_P-fluviatile_contig12.1559.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4773bp|location=Sequence derived from alignment at P-fluviatile_contig12:2990886..2995658- (Porterinema fluviatile SAG_2381)
GAGATAAGGTGCCCCAAGCCTTATATACTGACATGTGGTACCCACATACC CCCCCGGATACGAGCGAGCGGACAGCTCAGCATCGTAGACAAATAAGCGG GTACCACGACGCACCCCCCGTAGGATGTACGATAACCGGAACCCGACCGG CTGGCGGCGGACAAAAAACCACTTTCACGTGCCCGGATTCGAACCCGGGA CTTCAACATCGCAGGGGTGACAATCCTGCCGTCGACGCCACTTGTGAAAA GGGTGTTTGCCCGACATGAGATAAGGTGCCCCAAGCCTTATATACTGACA TGTGGTACCCACACAAGATTTGGTCGCGCCAGCCCTTCTCCAAATCTTGT CGGCAGGGGGGGTCAAATTGCACCGCATCTTCCGCACACCCCGAAAACAC ACCCTCCGCCAGCCTCTGCACATCATGGATGACGACCTTGATGAGGCGGC TGTCACGGCCGCGGCATGTGCTTCCGTACACAGCCTACACACCATGAGTA TGCAGCTCAACGACTTGTTCGAGGATGGTCTAGAGCAACAGAGCCACCAC GAGTGGTGGGATGACCCCGACGATGACGACTGGAGTGCAGAAGCCATCCG CACCCGTGAAAGTCGTCCACGCCCGGACTACAACAAGTCGGCTTGGGGCT TGCGATTGGCGCAGATGGAGAGCCCGAGGTGCAGCCACAACTTAGCCCAG CACAGCCGAGAAGCGAAGGCCTTCAGAGCAGACTTCCGCGTCCCGTACGA GTTCTTCCTCGAGTTCGTTGAGATGGTTCGTCCTGTGTTCCCTGCAACGG AACACCATGTCTCCAGGCGCCTGTGCGTCCCCTTGGAACTGAAGGTGTGT GCTGTTGTCCACGATGATTAGCCCTGGCTGTGTTTCAGTGTGTGTGCTTG TTTTGTCAAAGAGGTGGGGGCGCGTTGAGTGGGTCGGGCAGGTGTTGCAA TTGAATTGCACGCAGATTCCGTGCGCGCTCGTTATCCTACCCCGTGAGCA CTGAACACCCGCCTCGGCTCGAAGTCAATTTACACGACAGCAGCGGCAAC TGCGATGCATACGAGGTGCATTGAAAGCAGAGGCTTGTTCCCTTCAGAAG TAAGCGAAGAAGCGCCACGCAGTACCGTGTACTTCGTACCCAACAGCAGT AGTCTTCAGACAGGCGGTAGAAAGATTTGGCCGTCCGCACACAGCGGCGC GCTTGGGGCTGGTGTTCCATTTTGTGTATGCTCGTTTGAGACGTATGTAC GACTACACGCACGCGTCCCCGCGTCGTAGTCATTGGCTTATTACAACTCT GTGTTTGAGAGGCAGGAGGTAGCAGCAGCTCCAACACCCGCTATGCATGT GCATGTTCCACCAGCAGCCGCGACATCTACCGCACGCATGCGCTCGTTGG ATAACACTACCGTGAACAAGAACCTTAGGCGTTTCACACTCACTTCTACC TTTATTCCACACACCTGGCCCGATTCATGTTCAATTTGCAGGTGCTCGGG GTGCTTCAAGTACTAGGGAGAGGGAACTGCTTTGCTGATGTCGCAAACTT TTGATGAGCCGGACAACGGCGGAGCAGTCGTTTCACCGGTTCTGCCACTG CTTCGCCGCTGGTCTTTGGCGCACCTGGATACGTCTCCCGGAGGGAGAGG ATCTCCGACGTGTTGAGAGCACCTACAGATCTCTTGGGTATCCGGGAGCC GTGGGATCAATCGACTGCACCCACGTACCATGGGAGCGCTGTGCGTTTTC GGAGACCACAACCCACAAGGGCAAAGAGGGGTACACGACGGTCGTGTTCT AGGCGATCTGCGACCATGCTGGTCGCATCCTCGCGTCGACGAAGGGGTAC CCGGGGGCCGAGAACGACAAGACAGTCGTTCAGCGCGACTTGTCCGTGCG GCGGGTTGAGGGGGAGGAGCCGTGGGTGAGCTACAAGTACGATATGTACG ACGAGACCGGCGACGTGACTGGGCACACGGGGGGATGGCTCATCGCCGAC GGGGGCTACCATCGGGTGAGAGCGCGCAAGTATCATTTGTTGGACGGCAG TGTGCGGGGATGCACATGTGGCACACAATATGTCGCAGTTTGTCTCTGTT GGTTAGTGGTGGGAAGGTGTACAGCAACACCCCCGTTCCACGTTGCCCGA GCGTGAACAAGTGCATCTCCCGAGCGCAGATCAGTTTAAACGCCGCTCTT GTCTGTTGGGTTTTGGTCAATGATCTCTGATTTTCGTTGAACGCTCTGTA TTGCACAACCTCGCCCTGGAGGCGGTTGGGTGTAGCACAGCAATGCACCT ACAACAGCAGTCCGCACGGAACAACGTTTTGTTTCGCAGGTCGGACGTGG ACTAATCAAAAGATAGAGACCTCTCCCGCTTCAGTAATGGAGGGTTTTTC AATTTTATCCCACAGGCAAATGCACCTGTAGTCACTGAAGATTTGGACGA CTGTTACCTTATGGAAAGTACCGCCCCCTGAACCTGCTGTTCATTTCTCC CGATGTTTATCCCCGTGCAACAGGTCCCCCTTCTGATATGCCCGTTCAAG GTGTGTGCGAACGTGGCGGAGCAGCAGTGGAGCAAGAGGTTGGAGTCAGT TCGCAAGGACATCGAGTGCTTGTTCGGACGACTCAAGGGGCGGTTCAGGC TCTTCAAGACCGGGATTTTTTTCGGCGACCGGACAAAGATCGACGACGCA TGGTTCACCGCTTGCATCATCCACAACATGCTCCTCGCGTTTGATGGGTT GGATCAGCTGGAGATAGACATGGGCTGGGAGGGGAAAGACGGAGAGGCGG ACAGCACCAAGGGCGTGTTCCCGGCTGTCACGGTTGCTGACAGCGCGGAG GATGATGTATCCGGGGACGACGACGCCGCATTCCATGCCCACAGGCAACG TCTGGTAGACCACTTCGCGTTCGCGAAGAGCAGAAGCGAGGTGCAATGGT TCCGGGCGGTAGGAGCGGACACGCGATGATGGCTTGGTCTTTTTTCGTGT CCCCTGTCCCTAGTGCGCTGCATAGGGTGTGAGTAAAAGTATGTTGTACT CCCCACCCGTTGCTCTCCCCTGTATGTTTTGTGTGCAAATAAATGCTTTT GTCGGTGGTTTTTGACAATTTGACTGTTGGTACAAGCATGTGCGGAGAGA CGCAAGGCGTGTTGGATTTTGTGGTGGGTGGGATAAACTCTCAGCGCCGA AGGTAGTTGAGGCGGGGAGGGGCGGTGCGATGTATTGTACGGAGTAGGAG TTTCTATACTCCAGAGTATTTTTTTGCGGGAGACGCAAAGGGTGTTGCAG TTTTTTGGTGGCTGGGAGAAACATCCAGTGCCGAAGGTGGTTGAGAAGAA ACGGCGGGGCGCTGAATGTTTTGTTGGAGTTACATATTTTTGTTTGCGGG AGAGACGCTCTAAGGGTGTTGGAGTTTTGTGGTTGCTGTGAAAAACCCAG TGCCGAAGGTAGATGAGAAGGGAGGCAGGCGCTGGATGTTTTGTTAAAGT TTTTTTTTCTTTTTTGCGGGAGAGACGCAAAGCGTGTTGGAGTTTTTGGT GGCTGGGAGAACCATCCAGTCCCGAAGGTAGATGAGGGGAGGGCGGATCG TTGGATGTGTGCTTGGAGTTATATTTTTTCGCGTGGGAGACGCAAAGCGT GTTGGAGATCTCGTTGTGGTGGCTGGGAGAAACATCCAGTGCCGAAGGTA GATGAGGGGAGGGCGGGGCGTTGGATGTTTTCTTGGAGTTATTTTTTTTT CGCGGGGAGACGCAAAGCGTGTTGGAGCTTTCTTTGTGGTGGCTGGGATA AACGCTCAGCGCCGTAGATGAGAGGGGCGGGGCGTTGGATGTTTTGTAGG AGTAATTGTTTTTTTTCGTGGGGGAGACGCAAAGCGTGTTGGAGCTTTCT TTGTGGTGGCTCCAGTGCCGAAGGTAGATGAGGGGAGGGCGGGGCGTCGG ATGTTTTCTTGGAGTTATTTTTTTCGCGGGGGAGACGCAAAGCGTGTTGG AGCTTTCTTTGTGGTGGCTGGGATAAACGCTCAGCGCCGTAGATGAGAGG GGCGGGGCGTTGGATGTTTTGTAGGAGTAATTTTTTTTTTTCGTGAGGGA GACGCAAAGCGTGTTGGAGCTTTCTTTGTGGTGGCTCCAGTGCCGAAGGT AGATGAGGGGAGGGCGGGGCGTCGGATGTTTTCTTGGAGTTATTTTTTTC GCGGGGGAGACGCAAAGCGTGTTGGAGCTTTCTTTGTGGTGGCTAGGATA AACGCTCAGCGCCGTAGATGAGAGGGGCGGGGCGTTGGATGTTTTGTAGG AGTTATACATTTTTTGGCGGGGGAGACTTGAAGCGTGTTCGAGTTTTGTG GTGGCTGGGAGAAACATGCAGTGCTGAAGGTAGTAGAAAAGGGAGGCGGC GCTGGATGTTATATTTTTGTTTGCGGGGGAGACGTAAAGCGTGTTGGAGC TTTCTTTGTGCCGAAGGTAGATGAGAAGGGAGGGGTTCACCCTATCCACG GTATTGTGTATTGTACTGGTCGGGCGGGGGAGGACGGAGGCAAAGTTGAA CTTTTCACGAGAGTACACACCTCAATTTAGTATCACGTGCTGTCTTGTTC GTGCAACAAAACCGAACATGAAGGATTGGTTCATGTATCGTTGCGTCACC TTGGCATGCAACGTTGCGAAAAGAACTTTGGGTACGGCCATCGGTTATTG GTCCGCCATCGTTTTCTACCCATACTGCGACTTCAAAGTGGAGGAGGTAA AAAAATACTCCGTATACTCCAAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:2990886..2995658-

>mRNA_P-fluviatile_contig12.1559.1 ID=mRNA_P-fluviatile_contig12.1559.1|Name=mRNA_P-fluviatile_contig12.1559.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1056bp|location=Sequence derived from alignment at P-fluviatile_contig12:2990886..2995658- (Porterinema fluviatile SAG_2381)
ATGTACGACGAGACCGGCGACGTGACTGGGCACACGGGGGGATGGCTCAT
CGCCGACGGGGGCTACCATCGGATGTACGACGAGACCGGCGACGTGACTG
GGCACACGGGGGGATGGCTCATCGCCGACGGGGGCTACCATCGGGTCCCC
CTTCTGATATGCCCGTTCAAGGTGTGTGCGAACGTGGCGGAGCAGCAGTG
GAGCAAGAGGTTGGAGTCAGTTCGCAAGGACATCGAGTGCTTGTTCGGAC
GACTCAAGGGGCGGTTCAGGCTCTTCAAGACCGGGATTTTTTTCGGCGAC
CGGACAAAGATCGACGACGCATGGTTCACCGCTTGCATCATCCACAACAT
GCTCCTCGCGTTTGATGGGTTGGATCAGCTGGAGATAGACATGGGCTGGG
AGGGGAAAGACGGAGAGGCGGACAGCACCAAGGGCGTGTTCCCGGCTGTC
ACGGTTGCTGACAGCGCGGAGGATGATGTATCCGGGGACGACGACGCCGC
ATTCCATGCCCACAGGCAACGTCTGGTAGACCACTTCGCGTTCGCGAAGA
GCAGAAGCGAGGTGCAATGGTTCCGGGCGGTAGGAGCGGACACGCGATGA
GTCCCCCTTCTGATATGCCCGTTCAAGGTGTGTGCGAACGTGGCGGAGCA
GCAGTGGAGCAAGAGGTTGGAGTCAGTTCGCAAGGACATCGAGTGCTTGT
TCGGACGACTCAAGGGGCGGTTCAGGCTCTTCAAGACCGGGATTTTTTTC
GGCGACCGGACAAAGATCGACGACGCATGGTTCACCGCTTGCATCATCCA
CAACATGCTCCTCGCGTTTGATGGGTTGGATCAGCTGGAGATAGACATGG
GCTGGGAGGGGAAAGACGGAGAGGCGGACAGCACCAAGGGCGTGTTCCCG
GCTGTCACGGTTGCTGACAGCGCGGAGGATGATGTATCCGGGGACGACGA
CGCCGCATTCCATGCCCACAGGCAACGTCTGGTAGACCACTTCGCGTTCG
CGAAGAGCAGAAGCGAGGTGCAATGGTTCCGGGCGGTAGGAGCGGACACG
CGATGA
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