mRNA_P-fluviatile_contig12.1549.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: D7G906_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G906_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.980e-41 Identity = 80/113 (70.80%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 10 VPIDCESPLSCRFWGSSTSRRPWRRSEQRAGLSSSSGGTREDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSP 348
V E PL S SR + EQR GLS+ S RED IASILESK+ ASKAVVHDISGGCGSM+KIEVESPLFRGKGLVAQHRMVK AL EIA MHGLTLLTRPSP
Sbjct: 17 VKACAEFPLRAIAVAGSDSRACYWPLEQRRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 129
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A7S2CEL3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEL3_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.150e-21 Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 127 REDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSPE 351
+ED++ L + + + +V D+SGGCGSM+KIEVESPLFRG LV QHRMV D LK EI MHGLT+ TR SPE
Sbjct: 57 KEDLMKEALIAALEPTDVLVEDVSGGCGSMYKIEVESPLFRGVNLVKQHRMVTDTLKKEIGEMHGLTINTRRSPE 131
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A836CI04_9STRA (Bola protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI04_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.200e-20 Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 121 GTREDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSP 348
G++E + +L ++ A+K V DISGGCGSM+ I +ESPLF+G LV QH++VK LK EIA MHGLTL T+ SP
Sbjct: 38 GSQEKAMEKLLGKELKATKVTVEDISGGCGSMYSIAIESPLFKGLSLVKQHQLVKSTLKKEIAAMHGLTLQTKVSP 113
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A1V9Y5G4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5G4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.440e-19 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 130 EDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLT 336
E+ +A L ++SA+ V DISGGCGSM+KIEV SP F GK +VAQHR+V LK EIAGMHGLTL T
Sbjct: 19 EEKMAVALRQELSATHVKVDDISGGCGSMYKIEVASPTFEGKNVVAQHRLVNQVLKEEIAGMHGLTLKT 87
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A067C2D2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2D2_SAPPC) HSP 1 Score: 84.7 bits (208), Expect = 5.160e-19 Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 124 TREDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLT 336
T E+ +A+ L +SA+ V DISGGCGSM+KIEV SP F GK VAQHR+V + LK EI GMHGLTL T
Sbjct: 21 TAEEKMATSLRQALSATHVKVDDISGGCGSMYKIEVASPTFEGKNRVAQHRLVNEVLKEEIGGMHGLTLKT 91
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A7S2H125_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H125_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.850e-18 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 106 SSSSGGTREDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSPE 351
S S G ++E+ + L ++AS V DISGGCG+M+K+EVESP FRG ++ QHR+V LK EI MHGLTL TR +PE
Sbjct: 31 SESDGVSKEESMRLALSQALNASFVSVDDISGGCGAMYKLEVESPDFRGLNMLKQHRLVTQVLKKEIGEMHGLTLQTRVTPE 112
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A4D9DBR1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBR1_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.870e-18 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 127 REDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSPEK 354
RED + ++L + ++ D+SGGCG+M+ +EVES LFRGK LVAQHRMV L EI+ MHGL+L TRP P+K
Sbjct: 52 REDRMRALLSEHFKPTHLLIQDVSGGCGAMYNMEVESELFRGKALVAQHRMVNQVLAKEISEMHGLSLKTRP-PKK 126
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A0D2VL89_CAPO3 (BolA-like protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VL89_CAPO3) HSP 1 Score: 82.0 bits (201), Expect = 1.990e-17 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 130 EDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSPEK 354
E+ I++IL K+ + V+DISGGCGSM++I VESP+F G LV QHR+V + LK EI GMHG+ L TR +P K
Sbjct: 65 EERISNILLDKLKPTALGVNDISGGCGSMYQIGVESPMFAGLSLVQQHRLVNEILKDEIKGMHGMRLQTRTTPPK 139
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: A0A8K0AJV7_ANDGO (Mitochondrial BolA domain-containing protein n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AJV7_ANDGO) HSP 1 Score: 79.3 bits (194), Expect = 5.610e-17 Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 103 LSSSSGGTREDIIASILESKVSASKAVVHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRP-SPE 351
LS+++ G E I+ IL S + SK V DISGGCG F + VESP+FRGK +V QHRMV LK E+ MH L + T+P SPE
Sbjct: 10 LSTAAEGPTEASISKILRSALQPSKLNVQDISGGCGVSFAVVVESPMFRGKTIVEQHRMVNSVLKQEMEVMHALRISTKPTSPE 93
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Match: UPI001403FE8D (bolA-like protein 3 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403FE8D) HSP 1 Score: 79.0 bits (193), Expect = 1.060e-16 Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 94 RAGL---SSSSGGTREDIIASILESKVSASKAV-VHDISGGCGSMFKIEVESPLFRGKGLVAQHRMVKDALKAEIAGMHGLTLLTRPSPEK 354
RAGL +SS+G E I+S+L+ K +K V V D+SGGCG+M+++ VES FRGK +V QH M+ ALK EI GMHGL + T EK
Sbjct: 16 RAGLLRRASSAGSEGEARISSVLQEKFPNAKQVRVVDVSGGCGAMYEVHVESEEFRGKRVVMQHHMINQALKDEIKGMHGLRIFTTVPEEK 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1549.1 >prot_P-fluviatile_contig12.1549.1 ID=prot_P-fluviatile_contig12.1549.1|Name=mRNA_P-fluviatile_contig12.1549.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp MTSVPIDCESPLSCRFWGSSTSRRPWRRSEQRAGLSSSSGGTREDIIASIback to top mRNA from alignment at P-fluviatile_contig12:2916091..2921769- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1549.1 ID=mRNA_P-fluviatile_contig12.1549.1|Name=mRNA_P-fluviatile_contig12.1549.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5679bp|location=Sequence derived from alignment at P-fluviatile_contig12:2916091..2921769- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2916091..2921769- >mRNA_P-fluviatile_contig12.1549.1 ID=mRNA_P-fluviatile_contig12.1549.1|Name=mRNA_P-fluviatile_contig12.1549.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=720bp|location=Sequence derived from alignment at P-fluviatile_contig12:2916091..2921769- (Porterinema fluviatile SAG_2381)back to top |