mRNA_P-fluviatile_contig12.1548.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1548.1
Unique NamemRNA_P-fluviatile_contig12.1548.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: D7G905_ECTSI (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G905_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 6.660e-112
Identity = 187/274 (68.25%), Postives = 222/274 (81.02%), Query Frame = 1 
Query:    1 MRVGFVLQAAFVSSAKTVRYTPFSAGYHSSISGCAMALQETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGVEGTAFQTSAVENSSKTKNEAADSESLPAGASLVSQMLKKVDQVSKLELGN-PALVEKLRESAMNYPSLLKNPLIGALELYNEDGNKEALLKNLLA 819
            MRVGF L AAF SSAK  R    SA Y S +S   M + ETMQVKKLS+NAIMP RGSEHAAGFDLASAYEATVPAGRQAL+KTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFN G+EDF+V+KGDRVAQLILERICMA +EEV ELSETTRGSGGFGSTGVE  A Q+S+   +   K +   SE +   ++ V+++L+ +D+V KL++ + P LV KLR++AM+ PS L++ L+G LE+Y+E G+ +AL KNL+A
Sbjct:    1 MRVGFALHAAFASSAKISRCA-LSAAY-SILSDATMTMGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQSSSTVANGAKKIKVVGSEPVSRASATVAKVLRLIDRVDKLDVDDAPTLVAKLRKAAMSRPSSLEDLLVGILEIYDETGDTKALNKNLMA 272
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: A0A7S2XY21_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY21_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.300e-63
Identity = 129/238 (54.20%), Postives = 160/238 (67.23%), Query Frame = 1 
Query:  115 QETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGVEGTAFQTSAVENSSKTKNEA---------ADSESLPAGASLVSQMLKKVDQVSKLEL----GNPALVEKLRESAMNYPSLLKNPLIGALELYNEDGN 789
            QE + VKKLS+NA +P RGS  AAGFDL+SA + TVPAG +ALIKTDLSIAIP NTYARIAPRSGLA KK IDVGAGV+DYDYRGPVGVVLFN  +EDF V KGDRVAQLI+ERICMA+V EV +L ET RG+GGFGSTGV G A    A   +  T+ E           ++ + PA    V  M + +  V+ ++     G+  +V+K+R + ++    ++  L  AL  Y E  N
Sbjct:   74 QEILSVKKLSENATIPVRGSVDAAGFDLSSAVDTTVPAGGKALIKTDLSIAIPQNTYARIAPRSGLAWKKHIDVGAGVIDYDYRGPVGVVLFNHASEDFAVAKGDRVAQLIIERICMAEVVEVDDLPETARGAGGFGSTGVAGPAANGGATTGAPTTEGEGEPPAAKVRVVEAAAPPAAEDKVQAMAQLLAVVNDIDKECGDGSKEVVQKVRAAVVSEDMDVR--LQAALLAYKESPN 309
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: W7TKM8_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM8_9STRA)

HSP 1 Score: 207 bits (527), Expect = 6.540e-62
Identity = 114/152 (75.00%), Postives = 127/152 (83.55%), Query Frame = 1 
Query:  100 CAMAL---QETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMA---QVEEVAELSETTRGSGGFGSTGV 537
            CAM+L    ET+QVK+LS++A++P RGSE AAG+DLASA +  VPA  +AL+KTDLSIAIPPNTYARIAPRSGLA KK IDVGAGVVDYDYRGPVGVVLFN GTEDF V +GDRVAQLILERI MA   +VEE  EL ET RG GGFGSTGV
Sbjct:   81 CAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGV 232
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: A0A835YUJ2_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ2_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.420e-59
Identity = 122/232 (52.59%), Postives = 149/232 (64.22%), Query Frame = 1 
Query:  118 ETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGVEGTAFQTSAVENSSKTKNEAADSESLPAGASLVSQMLKKVDQVSKLELGNPALVEKLRESAMNYPSLLKNPLIGALELYNEDGNKEALLKNL 813
            E M VKKLS  A +P RGSEHAAGFDLA+A+ A VPAG +AL+KTD +IA+P  TYAR+APRSGLA K+MID GAGV+DYDYRG VGVVLFN G E+F V+ GDR+AQLILERI MA   EV EL ET RG+GGFGSTG   +      V  ++  K + AD      GA L +QML  V  +      + A  +KL+  A++  S     L+ A+  Y    N   L  NL
Sbjct:   15 EVMLVKKLSPQAHLPVRGSEHAAGFDLAAAHAAVVPAGGKALVKTDCAIAVPAGTYARVAPRSGLAWKRMIDTGAGVIDYDYRGNVGVVLFNHGPEEFVVEPGDRIAQLILERISMAPALEVQELPETERGAGGFGSTGGSRSLQSALPVSEAAAKKVKLADQ-----GADLTAQMLIFVSSLPDGVTASKADCDKLKLCALSDRS---TRLLAAIRAYEATSNVAELQDNL 238
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: A0A448Z119_9STRA (dUTPase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z119_9STRA)

HSP 1 Score: 204 bits (518), Expect = 6.720e-58
Identity = 105/142 (73.94%), Postives = 122/142 (85.92%), Query Frame = 1 
Query:  112 LQETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGV 537
            + +T+ VKKLS+NA +P RGSE +AGFDLA++   T+PAG + ++ TDLSIA PP TYARIAPRSGLAVKK ID GAGVVD DYRGPVGVVLFNLGTEDFQV+KGDR+AQLILE+I MA VEEVA+L ET RG+GGFGSTGV
Sbjct:  119 MPDTLLVKKLSENATLPVRGSEWSAGFDLAASRPQTIPAGGRGIVHTDLSIACPPGTYARIAPRSGLAVKKGIDCGAGVVDADYRGPVGVVLFNLGTEDFQVQKGDRIAQLILEKISMAAVEEVADLDETGRGAGGFGSTGV 260
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: D8LVR6_BLAHO (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVR6_BLAHO)

HSP 1 Score: 192 bits (488), Expect = 9.560e-58
Identity = 102/152 (67.11%), Postives = 118/152 (77.63%), Query Frame = 1 
Query:  115 QETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARI-----------APRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGV 537
            +E + VKKLS+NA +P RGS HAAG+DL SA + TV A  +ALI TDLS+AIPPN Y R+           APRSGLA+KK IDVGAGVVD DYRGP+G+VLFN G EDF+VKKGDRVAQL+LERICMA + EV  L ET+RGSGGFGSTGV
Sbjct:    3 EEILYVKKLSENATIPVRGSVHAAGYDLFSAADVTVKARGKALIPTDLSVAIPPNCYGRVGMKCSSLFYFVAPRSGLALKKFIDVGAGVVDCDYRGPLGIVLFNFGDEDFEVKKGDRVAQLVLERICMAPIVEVESLDETSRGSGGFGSTGV 154
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: UPI000711A950 (deoxyuridine 5 -triphosphate nucleotidohydrolase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711A950)

HSP 1 Score: 190 bits (483), Expect = 1.240e-57
Identity = 96/141 (68.09%), Postives = 115/141 (81.56%), Query Frame = 1 
Query:  115 QETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGV 537
            QET+ +KKLS+NA  P RGS ++AG+DL SA +  +PA ++AL+ TDLS+AIP N Y RIAPRSGLA+KK IDVGAGVVD DYRGP+G+VLFN    DF+VKKGDRVAQLILERICMA + EV  L +T RG+GGFGSTGV
Sbjct:    3 QETLYIKKLSENATTPVRGSPYSAGYDLFSAADIVIPAHQKALVPTDLSVAIPHNCYGRIAPRSGLALKKFIDVGAGVVDCDYRGPLGIVLFNFADTDFEVKKGDRVAQLILERICMAPIVEVDSLDDTERGAGGFGSTGV 143
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: A0A7R9WDQ0_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDQ0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.390e-57
Identity = 99/139 (71.22%), Postives = 115/139 (82.73%), Query Frame = 1 
Query:  121 TMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGV 537
            T++VKKLS+NA +P RGS  +AGFDL+SA   T+PAG + + KTDL+IA PP TY R+APRSGLAVKK IDVGAGV+D DYRG VGVVLFN G EDF V+KGDRVAQLILE +CM  VEEV EL+ET RG+GGFGSTGV
Sbjct:   31 TLRVKKLSENASLPTRGSPLSAGFDLSSAECVTIPAGGRGIAKTDLAIACPPGTYGRVAPRSGLAVKKGIDVGAGVIDADYRGNVGVVLFNFGKEDFVVEKGDRVAQLILEEVCMFPVEEVKELTETERGAGGFGSTGV 169
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: A0A7S4IKG9_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IKG9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.050e-56
Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 1 
Query:  121 TMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGV 537
            T++VKKLS++A +P+RG+  +AGFDL+SA +  +PAG + + KTDL+IA PP TY R+APRSGLAVKK IDVGAGV+D DYRG VGVVLFN G EDF ++KGDRVAQLILE++CM  VEEV EL+ET RG+GGFGSTGV
Sbjct:   11 TLRVKKLSEHATIPSRGTPLSAGFDLSSAEQVMIPAGGRGIAKTDLAIACPPGTYGRVAPRSGLAVKKGIDVGAGVIDADYRGNVGVVLFNFGKEDFVIEKGDRVAQLILEKVCMHPVEEVEELTETERGAGGFGSTGV 149
[Close]
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Match: K0RIK5_THAOC (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RIK5_THAOC)

HSP 1 Score: 189 bits (479), Expect = 1.120e-56
Identity = 105/155 (67.74%), Postives = 117/155 (75.48%), Query Frame = 1 
Query:   85 SSISGCAMALQETMQVKKLSKNAIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLILERICMAQVEEVAELSETTRGSGGFGSTGVEGTA 549
            SS S  A+     MQVK LS NA MP RGS  +AGFDLA+A   TVPAG +A++KTDLS+A P  TYAR+APRSGLAVKKMIDVGAGVVD DYRG VGVVLFN G EDF V  GDR+AQLILE+I M    +V EL+ET RG GGFGSTGV G A
Sbjct:    4 SSSSSSALPPSGCMQVKLLSDNAKMPMRGSPLSAGFDLAAAESVTVPAGGRAVVKTDLSVACPEGTYARVAPRSGLAVKKMIDVGAGVVDADYRGNVGVVLFNFGQEDFNVAVGDRIAQLILEQISMVPAVQVEELTETERGEGGFGSTGVAGDA 158
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G905_ECTSI6.660e-11268.25Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S2XY21_9STRA1.300e-6354.20Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
W7TKM8_9STRA6.540e-6275.00Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A835YUJ2_9STRA3.420e-5952.59Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A448Z119_9STRA6.720e-5873.94dUTPase domain-containing protein n=1 Tax=Pseudo-n... [more]
D8LVR6_BLAHO9.560e-5867.11Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
UPI000711A9501.240e-5768.09deoxyuridine 5 -triphosphate nucleotidohydrolase n... [more]
A0A7R9WDQ0_9STRA2.390e-5771.22Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S4IKG9_9STRA1.050e-5668.35Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
K0RIK5_THAOC1.120e-5667.74Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2910972..2915240 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.2
Seed ortholog evalue3.7e-90
Seed eggNOG ortholog2880.D7G905
Preferred nameDUT
KEGG rclassRC00002,RC00010
KEGG koko:K01520,ko:K21286
KEGG ReactionR02100,R11560,R11896
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00053
GOsGO:0000166,GO:0000287,GO:0001889,GO:0003674,GO:0003824,GO:0004170,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006259,GO:0006260,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010469,GO:0010646,GO:0010648,GO:0014070,GO:0015949,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0023051,GO:0023057,GO:0030545,GO:0030547,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032552,GO:0032556,GO:0033554,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036094,GO:0042221,GO:0042802,GO:0042975,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043497,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051259,GO:0051260,GO:0051716,GO:0055086,GO:0061008,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0098772,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:2000272
EggNOG free text desc.dUTP metabolic process
EggNOG OGsCOG0756@1,KOG3370@2759
EC3.5.1.122,3.6.1.23
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiondUTPase-like
Ec32 orthologEc-15_002400.1
Exons5
Model size843
Cds size843
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1548.1prot_P-fluviatile_contig12.1548.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 2910972..2915240 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.160218-CDS-P-fluviatile_contig12:2910971..29111741622815525.160218-CDS-P-fluviatile_contig12:2910971..2911174Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2910972..2911174 +
1693562134.0431273-CDS-P-fluviatile_contig12:2910971..29111741693562134.0431273-CDS-P-fluviatile_contig12:2910971..2911174Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2910972..2911174 +
1622815525.1789982-CDS-P-fluviatile_contig12:2913773..29140501622815525.1789982-CDS-P-fluviatile_contig12:2913773..2914050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2913774..2914050 +
1693562134.0659897-CDS-P-fluviatile_contig12:2913773..29140501693562134.0659897-CDS-P-fluviatile_contig12:2913773..2914050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2913774..2914050 +
1622815525.194818-CDS-P-fluviatile_contig12:2914233..29143651622815525.194818-CDS-P-fluviatile_contig12:2914233..2914365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2914234..2914365 +
1693562134.0852654-CDS-P-fluviatile_contig12:2914233..29143651693562134.0852654-CDS-P-fluviatile_contig12:2914233..2914365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2914234..2914365 +
1622815525.209946-CDS-P-fluviatile_contig12:2914720..29148131622815525.209946-CDS-P-fluviatile_contig12:2914720..2914813Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2914721..2914813 +
1693562134.095642-CDS-P-fluviatile_contig12:2914720..29148131693562134.095642-CDS-P-fluviatile_contig12:2914720..2914813Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2914721..2914813 +
1622815525.2214725-CDS-P-fluviatile_contig12:2915102..29152401622815525.2214725-CDS-P-fluviatile_contig12:2915102..2915240Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2915103..2915240 +
1693562134.105394-CDS-P-fluviatile_contig12:2915102..29152401693562134.105394-CDS-P-fluviatile_contig12:2915102..2915240Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 2915103..2915240 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1548.1

>prot_P-fluviatile_contig12.1548.1 ID=prot_P-fluviatile_contig12.1548.1|Name=mRNA_P-fluviatile_contig12.1548.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=281bp
MRVGFVLQAAFVSSAKTVRYTPFSAGYHSSISGCAMALQETMQVKKLSKN
AIMPARGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAP
RSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNLGTEDFQVKKGDRVAQLIL
ERICMAQVEEVAELSETTRGSGGFGSTGVEGTAFQTSAVENSSKTKNEAA
DSESLPAGASLVSQMLKKVDQVSKLELGNPALVEKLRESAMNYPSLLKNP
LIGALELYNEDGNKEALLKNLLAFRGKLTR*
back to top

mRNA from alignment at P-fluviatile_contig12:2910972..2915240+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1548.1 ID=mRNA_P-fluviatile_contig12.1548.1|Name=mRNA_P-fluviatile_contig12.1548.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4269bp|location=Sequence derived from alignment at P-fluviatile_contig12:2910972..2915240+ (Porterinema fluviatile SAG_2381)
ATGAGAGTCGGTTTTGTCCTCCAAGCAGCGTTTGTATCTAGCGCGAAGAC
TGTCCGGTACACTCCATTCTCAGCTGGCTACCACAGCAGTATTTCCGGAT
GCGCCATGGCACTACAAGAGACGATGCAAGTTAAGAAGCTCTCCAAGAAC
GCCATCATGCCCGCGAGAGGTTCAGAACACGCTGCAGGGTTTGATCTCGC
AAGGTGCGTGTTTGTAGAGCGAATCAATCTGGCTAGTGATGGAGGTCCAG
AGATGCAAAATTCAAAAAAAAAAAGGCGCGAGCGCGCGCGGGCGCTCGCA
CACACTCCCTGGATAACACACTTTGCGCTAAAGCGCCGGCCCGTTCGTAA
GAAGCACGTACATTGCATTTGTTGTTTTGAACGAGGCTCATTTCTTGCTT
TGAACCTTCCGCCTGAGCGCAGGCTTCCATGAAGGATTTATTGCGGCGCT
GGCAGCTGAGCCGAAATTCATAAGGGTTTCTTTTCGTTTGTTTTAAACAA
TCTGAGCCTCGATTTCCTACGAGGCGGCCGGCACTACTCTGTACGTCCAG
ATACAGTGGCGGATCACGAGTTTTACCGTTTGCTAAAGAATTTTGGATTT
TTAAACCACAATAATAGAAGGCAGAGACGCCGGAAATCTGAAAACATCAT
CGAAGGCCAAAACGGATTCGGACAGACGCTGCCAAGTGAGCCACTGAGTT
CCTCTCGACCTCGCAGTGTATTTTTTCGGGCTAATCCGAGATTACCCCTG
TTCACGCTTCCAATATAGAACACAGAAATCAGTGGTCACAAAAGAGGGAT
TTTTCAGTCCTCCCCGTCCGGTAAAGTTCCCCACATTGTGAGATGGGGTG
GGTGGGTGGGAGAATTGCTTGAGTCCCGAACGAAAACTCTTGACCGAGTG
GCTATGTTGTCCTGCACCGACCGGGGTTTCGGTGGTGCTGTTGCGTTGTT
CTGCGACTTGTACTCTTCTGGTGCTAAATTAACATATCTGACTTTTCAAC
ATTTCAGCTAACAGTCCTTTGAAATCTCTAGCACGCTTCCGCAAACCACA
GATTCGTGAGAACCGAAGCTTCCCGTGTGTTGAAGAGGAAGTACCGATTT
ATGAGCGTCGAAATCGTGTCACGCCCAAAACCGATTTCAGAGGAAGTTTG
AATCTTTCGCGGCGATTTCTCTTCAATCGAACCATAAAAAACAAAAACAC
ACCCCCGGACGCCTCGCAGCTGTGGACACCATGCCACTTTGTAGTGAGCT
CAAGGATGTTGCCGAGAATTGCGGCATGCACGACGTTTCCTACCATCTTC
GTGAGGCCATGCTCGCCTGGATGAGCGCTTTCGGGTCGAGTGAAGCGAGC
AAAAGTTGTATTGAGAGAATATTTTCAAGTTGGAGAGGACGTAGGTAGAG
CTTCCGGGTAACATTGAGCGGGCGGGAGAAGCGCTTGATTTCCTACGCTG
CTTGTGCTTCGGTAATTTTCGTGCGGCAAGGAAGGATAGAGGCATCGGCT
GACGTCTTGACTGTCGGAGACGTTTTGCGATCTGCGGTGAACATAGCAGT
GGTAAGATCTTGTTGCGTGGTACGGTTCCTAAAGCTGATCAAACGTTTGA
GTCGAGTAAAATCGATGCTTTGGCAGTGCTGCGGCGTGACGCTTAGTTGT
TAGGTGCTCCCACATCAGCTGTGACGGGAATTGTAGGCTGGAGCACGCCG
CTAAACGGACTGCGCTGTAAGGTTTGGCTACAGTTTACCGAGGGACTTCT
CTCACAGCATGCTCACGATTCAAGATATTTTCTCTTGAGCGGTAGCCAAA
TCGATGCAGGAGAATTCCGATTTAAGGGACTGCAGGACCGCTTGTCGTAC
CTTCTTTTAAACCGGAGCCACTACTGTATGTGAGATACGGCCTCCCATAC
CCGCAATTACTATTTCTCGACGTTGAAGGTGAGAGCTGCCCAATATATAT
GCTACATGTCTATCCTTCGTCGAGATTGTGGTGTGCTTGAAGCTGGAAAA
TCCCGCCGGTGATATGACTTGCAGCACAGGCTGAGGTTCGAGGCTGTAGG
TATCTCGCATTTTTTCAGATTTTGACCCACCGCCGAAGTGGTGAAAGTGA
GCATTTGTGTCTCGAGCTGCATGCTTCAAGGGATTGTTGCTCGGCAGCAG
CAAAATCTATCTGGGAGCCCGATCCTTGGAGGGACACACCCAATATGAAA
CCGATGCAGATCGAGAGGGGGGTGCGGAGGTAATTTGAAATCTCAGACCA
GCAGAGATAGCGCTGGCTTTCGCGACACTAACACAAACATTTTTTGTCAG
GCGCAATACCGCCCACCGTATTCCTTTGCTCAGAAATCCTTGCATGTGTC
ACAACACCTTTATTTGGCATCACAGAAAGGACGGGTTTGCGGCCGATATA
TATTTTTCGCACCCGAAGACCTGATTATTCGGTTTGTACGGGTACACTCT
AGCTCTCTCTCTTGAATTCTGGTATCTTTGGCATTCGCCACACCACGACC
ATCGAATCGCCGACCTCACCGACATGCACAGGTTCATGCATTCGTTGCGA
TCGACCAACTTCAGGTCGACTCTTCATTTCGAGAGGGGGTCGAGCGTGTT
ACACGTGTACCGCGCAAGTGCTCGAGATTGCGCTCTATCTTCTTCCCTTC
GCGGGACTATGTCTCACTCCGAAGCCCTGCACTCGAAGCCCTGCACTCGC
TTTGAAAGTTTCAGAGGGAGAGTACGTTCTAAACCCAGTAGACCACTACT
GCAATTCCGCCCTTGGTGCTGCTGCGACACCCCCGCTTGACTCAATTTGC
AGCGCCTACGAGGCCACGGTCCCCGCCGGACGCCAGGCTCTCATCAAGAC
GGACCTTTCTATCGCCATCCCTCCCAACACGTACGCACGAATCGCCCCTC
GGTCCGGCCTGGCCGTGAAGAAGATGATCGACGTTGGGGCTGGAGTTGTG
GACTACGACTATCGCGGGCCCGTCGGGGTTGTTTTGTTCAATCTCGGGAC
CGAGGACTTCCAGGTCAAGAAGGGAGACCGCGTGGCTCAGCTCATCTTGG
AACGCATCTGCATGGCACAAGTCGAGGAGGTTCGCAGCACAACTTTGCCA
TTTCATTTTGAGAGCAGGAGACCTTTTGAGCAACTACGAAATACGAAATC
TTGCACTCGGCTTCAACGCCCCGGTCAAGCTGCCTACAAACGATTTTTTT
TTCGAAACCCACAACCAACAGCAATATCTGTCCATTGTCTTCATGCGACG
TCCCGCGTCCAGGTCGCGGAACTTTCTGAAACGACACGAGGCAGCGGGGG
ATTTGGCAGCACGGGAGTCGAGGGAACAGCCTTTCAAACATCCGCTGTGG
AGAACAGCTCCAAAACAAAAAACGAGGCAGCTGATTCCGAATCGGTAAGC
GTGGTTCGGATCTAGGTGTGAACGGTAACTACCTCGTGCGTGAATATGAG
GTCAGCCATGACAACACATTGAAACCGACTTTTCGCAATATCACGACTTT
GATGGGCCACATTTGTGCCGTACGTTTTTGGTACGCAGTTGAATCAACCC
GATTTTGTTGCAGTATTTGAGCGGAATTTCTTCAATCTCTTTTTCTGTAC
AGCCACCCCAAGGAGAGTCGAGTCGAAGGATGGGATAAGTTCCAGTTACA
CAGGTACGCTCCAGTAGCTTCCTCTGATGGAACCCGCTCACACTTGGCAG
CGTCGGTTCAGATGCGCTTCCCTCCGCCGCCGCTTTTGATCGGCGCTAGC
TTCCTGCTGGAGCCTCGCTGGTATCGCAAATGCTGAAGAAAGTCGATCAA
GTCAGCAAACTGGAGCTGGGCAATCCCGCACTTGTTGAGAAGGTACGATA
TCCATGCAATGTTTCCAATTGTGGACAAGGCGTCATGGAAGGCGATCGAG
CACGCTTCGCATACCTTGAGATACCGGTTCGAACTTCGCGAAGTAGGAAG
ACCAACGGCACCCTCGACAACCACCATGCCTGACTGGTGACATTTTTTCG
CCCGGCGACGAATGTTTGTTGTGCTTCCACTGATCCTGGTTTTCGACTTC
ACGTTGAAGTTGGCCGCCGGCTTCGTTTGTCAATACCCAGTGCACGTGCA
TTTCGACCTCGTTCCACCCCATGCGAAACAGTTGCGGGAAAGCGCCATGA
ACTACCCGAGCTTGTTGAAAAATCCACTCATCGGTGCTTTGGAGCTCTAC
AACGAGGATGGGAACAAGGAAGCGCTCCTGAAGAATCTGCTAGCATTCCG
CGGAAAGCTGACGCGTTGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig12:2910972..2915240+

>mRNA_P-fluviatile_contig12.1548.1 ID=mRNA_P-fluviatile_contig12.1548.1|Name=mRNA_P-fluviatile_contig12.1548.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1686bp|location=Sequence derived from alignment at P-fluviatile_contig12:2910972..2915240+ (Porterinema fluviatile SAG_2381)
ATGAGAGTCGGTTTTGTCCTCCAAGCAGCGTTTGTATCTAGCGCGAAGAC
TGTCCGGTACACTCCATTCTCAGCTGGCTACCACAGCAGTATTTCCGGAT
GCGCCATGGCACTACAAGAGACGATGCAAGTTAAGAAGCTCTCCAAGAAC
GCCATCATGCCCGCGAGAGGTTCAGAACACGCTGCAGGGTTTGATCTCGC
AAGATGAGAGTCGGTTTTGTCCTCCAAGCAGCGTTTGTATCTAGCGCGAA
GACTGTCCGGTACACTCCATTCTCAGCTGGCTACCACAGCAGTATTTCCG
GATGCGCCATGGCACTACAAGAGACGATGCAAGTTAAGAAGCTCTCCAAG
AACGCCATCATGCCCGCGAGAGGTTCAGAACACGCTGCAGGGTTTGATCT
CGCAAGCGCCTACGAGGCCACGGTCCCCGCCGGACGCCAGGCTCTCATCA
AGACGGACCTTTCTATCGCCATCCCTCCCAACACGTACGCACGAATCGCC
CCTCGGTCCGGCCTGGCCGTGAAGAAGATGATCGACGTTGGGGCTGGAGT
TGTGGACTACGACTATCGCGGGCCCGTCGGGGTTGTTTTGTTCAATCTCG
GGACCGAGGACTTCCAGGTCAAGAAGGGAGACCGCGTGGCTCAGCTCATC
TTGGAACGCATCTGCATGGCACAAGTCGAGGAGCGCCTACGAGGCCACGG
TCCCCGCCGGACGCCAGGCTCTCATCAAGACGGACCTTTCTATCGCCATC
CCTCCCAACACGTACGCACGAATCGCCCCTCGGTCCGGCCTGGCCGTGAA
GAAGATGATCGACGTTGGGGCTGGAGTTGTGGACTACGACTATCGCGGGC
CCGTCGGGGTTGTTTTGTTCAATCTCGGGACCGAGGACTTCCAGGTCAAG
AAGGGAGACCGCGTGGCTCAGCTCATCTTGGAACGCATCTGCATGGCACA
AGTCGAGGAGGTCGCGGAACTTTCTGAAACGACACGAGGCAGCGGGGGAT
TTGGCAGCACGGGAGTCGAGGGAACAGCCTTTCAAACATCCGCTGTGGAG
AACAGCTCCAAAACAAAAAACGAGGCAGCTGATTCCGAATCGGTCGCGGA
ACTTTCTGAAACGACACGAGGCAGCGGGGGATTTGGCAGCACGGGAGTCG
AGGGAACAGCCTTTCAAACATCCGCTGTGGAGAACAGCTCCAAAACAAAA
AACGAGGCAGCTGATTCCGAATCGCTTCCTGCTGGAGCCTCGCTGGTATC
GCAAATGCTGAAGAAAGTCGATCAAGTCAGCAAACTGGAGCTGGGCAATC
CCGCACTTGTTGAGAAGCTTCCTGCTGGAGCCTCGCTGGTATCGCAAATG
CTGAAGAAAGTCGATCAAGTCAGCAAACTGGAGCTGGGCAATCCCGCACT
TGTTGAGAAGTTGCGGGAAAGCGCCATGAACTACCCGAGCTTGTTGAAAA
ATCCACTCATCGGTGCTTTGGAGCTCTACAACGAGGATGGGAACAAGGAA
GCGCTCCTGAAGAATCTGCTAGCATTCCGCGGAAAGCTGACGCGTTGATT
GCGGGAAAGCGCCATGAACTACCCGAGCTTGTTGAAAAATCCACTCATCG
GTGCTTTGGAGCTCTACAACGAGGATGGGAACAAGGAAGCGCTCCTGAAG
AATCTGCTAGCATTCCGCGGAAAGCTGACGCGTTGA
back to top