mRNA_P-fluviatile_contig12.1542.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1542.1 vs. uniprot
Match: D7G8Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z9_ECTSI) HSP 1 Score: 120 bits (300), Expect = 1.130e-26 Identity = 123/283 (43.46%), Postives = 145/283 (51.24%), Query Frame = 3
Query: 45 MAEDKPMTVRERMAALARASAGGSSAPTPAPPKTVGPSTGLSVAERLAKMRGGQGGAASSPGESPHAKKPGPVRSFEPPTSAPTIVTQGQAGGRGPSRSGGGSSIAAKIAALSGGV--KSSILPPSPSGAPTCSSATTPVLVKDVSEGGGNEAAVSPRMSAGLAGRVEAMERTASTSSDVSGEQKDAAAAVAAGASTPRPTPGTISPGLASRMKSMNLGSDATGDG--GKATAHSAGGTNALSAPPASESSISSPAVTTKMSPGLAARMGKAVPIPMPGGAMP 881
MAE+KPMTV+ERMAALARAS S+AP P P + G +TG SVAERLAKMR G P ++P P VR+ P APT+VT G S+SGG SS+A +IA+LSG K SILPPSPSG P SS VSP AG+ TS GE A A AA +SPGLA+R+ +M +D +G G+ L A S SS S K+SPGLAARMGKA PIPMPGG P
Sbjct: 1 MAEEKPMTVKERMAALARASGQSSAAPAPVP-RASGAATGPSVAERLAKMRAG-------PADAPTGDAPRLVRTLTPHPGAPTVVTSMPGGAGDSSKSGGSSSVADRIASLSGSGSGKPSILPPSPSGRPAGSS-------------------VSP-----AAGK---------TSQHGEGEVSAPAEAPAAS---------KLSPGLAARLNAMRSSTDYVPEGEEGEXXXXXXXXXXXL-ATSGSSSSFS------KVSPGLAARMGKAFPIPMPGGEQP 226 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1542.1 >prot_P-fluviatile_contig12.1542.1 ID=prot_P-fluviatile_contig12.1542.1|Name=mRNA_P-fluviatile_contig12.1542.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1242bp MAEDKPMTVRERMAALARASAGGSSAPTPAPPKTVGPSTGLSVAERLAKMback to top mRNA from alignment at P-fluviatile_contig12:2848398..2856399+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1542.1 ID=mRNA_P-fluviatile_contig12.1542.1|Name=mRNA_P-fluviatile_contig12.1542.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8002bp|location=Sequence derived from alignment at P-fluviatile_contig12:2848398..2856399+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2848398..2856399+ >mRNA_P-fluviatile_contig12.1542.1 ID=mRNA_P-fluviatile_contig12.1542.1|Name=mRNA_P-fluviatile_contig12.1542.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7452bp|location=Sequence derived from alignment at P-fluviatile_contig12:2848398..2856399+ (Porterinema fluviatile SAG_2381)back to top |