mRNA_P-fluviatile_contig12.1525.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: D8LPY2_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY2_ECTSI) HSP 1 Score: 240 bits (612), Expect = 4.280e-75 Identity = 127/192 (66.15%), Postives = 133/192 (69.27%), Query Frame = 1
Query: 241 ARQGLFDAGVAFDPTVPSAGSRTRIPTLVIFGGEDTLAPAETVASLQERLVRGGTVSETKIIPGQPRGFVLRGGGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVE 816
A GLFDAGVAF PT PSAG+RTRIPTL++FGG D +P ET A+KEAHAQLLGW+ THVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWR QRRPR GLAATRRTFELPGRMTLPEIIEVFTDIWEVE
Sbjct: 146 AIDGLFDAGVAFYPTAPSAGARTRIPTLLVFGGNDDASPPET-----------------------------------AIKEAHAQLLGWIGTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRIQRRPR-------------HGLAATRRTFELPGRMTLPEIIEVFTDIWEVE 289
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A8K1CJ36_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ36_PYTOL) HSP 1 Score: 101 bits (251), Expect = 3.570e-21 Identity = 63/200 (31.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query: 256 FDAGVAFDP----TVPSAG---SRTRIPTLVIFGGEDTLAPAETVASLQERLVRGG----TVSETKIIPGQPRGFVLRG-GGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
FD VA P T + G S PTLV+ GG+ A + L + L + +++ Q +GF G A +A A++L W+ H+H R++ WWP+G+ F TW AR+ W + RP RPP V + +GL++ RRTF+LP RM L +I+E+F +IWEV+
Sbjct: 149 FDCYVALSPEGRLTWSADGRDASTPLAPTLVLVGGKTPYAQTDACERLSKVLTHADEKHPSTFRSRVFRNQSKGFAFSGITDEDAATQAIAEVLDWLVAHLHRF-------RVAACTSDTDPWWPQGRNGPFFNCGLRTWQEARDAWVTPTQTRPPRPPSVPSHLIFDGLSSVRRTFDLPQRMALGDIVELFVEIWEVQQ 341
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A7S2WEI3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEI3_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.810e-21 Identity = 50/125 (40.00%), Postives = 64/125 (51.20%), Query Frame = 1
Query: 445 FVLRGGGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
F R +A+ AQ L A W L R E DWWPEGK F TW AR W+ R RP+RPP VSYD++V+ + RRT+ELPGRMTLP ++ + D+WE +
Sbjct: 211 FPARREAPKAITAWIAQRLSEEARRASAKRHPWSAAELFRRSPLEKDWWPEGKFGRFVNVGLGTWTEARALWKKSTRRRPARPPPVSYDAIVDAFSQPRRTYELPGRMTLPGMVSILNDVWECDG 335
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A2D4BQL7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQL7_PYTIN) HSP 1 Score: 99.8 bits (247), Expect = 8.790e-20 Identity = 59/181 (32.60%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 292 SAGSRTRIPTLVIFGGEDTLAPAETVASLQERLVRGGTVSET-------KIIPGQPRGFVLRG-GGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWE 810
SA S PTLV+ G+ A ++ LQ R+ R T ++ P + +GF G A +A A++L W+ H+H R++ WWP+G+ F + W +R W P RPPRV V +GL++ RRTFELP RM L +++E+F DIWE
Sbjct: 800 SATSHALPPTLVLVPGKSHYASSDEFRRLQ-RVFRASPTFSTDPPSFRARVFPDRIKGFAFSGITDEDAATQAIAEILDWLVVHLHRF-------RIAACTSDTDPWWPQGRNGPFLNVGLQAWQASRTAWITPTHEHPGRPPRVPSHLVFDGLSSVRRTFELPQRMALGDVVEIFVDIWE 972
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A7S3Y9H9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9H9_HETAK) HSP 1 Score: 88.6 bits (218), Expect = 1.640e-18 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 583 DWWPEGKG----RSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
+WWPEG+G R FR + E W+ R WR PRP PP V YD+VV+GL+A RTF LP RM L +++E+F D+WE+E+
Sbjct: 29 EWWPEGRGPGPGRQFRNPSLERWEALRLRWRVPVVPRPPAPPPVEYDAVVDGLSARVRTFTLPARMKLGDLVEMFNDVWELEN 111
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A3M6VP62_9STRA (DLH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP62_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.380e-17 Identity = 52/173 (30.06%), Postives = 83/173 (47.98%), Query Frame = 1
Query: 313 IPTLVIFGGEDTLAPAETVASLQERLV---RGGTVSETKIIPGQPRGFVLRG-GGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
IP LV G + + A +E +L + T + + Q GF A +A A++L W+ H+H +++ + WWP+G+ F TW +R TW + RP RPP V + +GL++ RRTF+LP RM L ++IE+F +IW+V+
Sbjct: 196 IPILVQLGEKSSYAASEAYQTLLSSCAGNPQAATALKASVFVNQQSGFAFSNITDEDAATQAIAEVLDWLIQHLHRF-------KVAAATSDTDPWWPQGRNGPFFNVGLHTWQESRATWLTPTQARPPRPPPVPAHLLFDGLSSVRRTFDLPQRMRLGDVIELFAEIWDVQQ 361
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A2P4YRQ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRQ1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.470e-17 Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 1
Query: 472 AVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
A +A A++L W+ H+H +++ + WWP+G+ F TW +R TW + RP RPP V + +GL++ RRTF+LP RM L ++IE+F +IWEV+
Sbjct: 58 AATQAIAEILDWLVQHLHRF-------QVAAATSDTDPWWPQGRNGPFLNVGLRTWQESRTTWLTATQARPPRPPPVPAHLLFDGLSSVRRTFDLPQRMRLGDVIELFAEIWEVQQ 166
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: W2LHL8_PHYPR (DLH domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2LHL8_PHYPR) HSP 1 Score: 90.1 bits (222), Expect = 4.930e-17 Identity = 56/192 (29.17%), Postives = 91/192 (47.40%), Query Frame = 1
Query: 268 VAFDPTVPSAGSRTR----IPTLVIFGGEDTLAPAETVASLQERLV---RGGTVSETKIIPGQPRGFVLRG-GGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
V++ P S G+ T IP L+ G + + A ++ +L + T + + Q GF A +A A++L W+ H+H +++ + WWP+G+ F TW +R TW + RP RPP V + +GL++ RRTF+LP RM L ++IE+F +IWEV+
Sbjct: 178 VSWKPIGESDGADTTEPPIIPLLLQLGEKSSYAASDAYQTLLCSCAANPQAATALKASLFVNQQSGFAFSNITDEDAATQAIAEILDWLVQHLHRF-------QMAAATSDTDPWWPQGRNGPFFNVGLRTWQESRATWLMATQTRPPRPPPVPAHLLFDGLSSVRRTFDLPQRMRLGDVIELFAEIWEVQQ 362
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: D0N2Z1_PHYIT (DLH domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0N2Z1_PHYIT) HSP 1 Score: 88.6 bits (218), Expect = 1.740e-16 Identity = 51/173 (29.48%), Postives = 82/173 (47.40%), Query Frame = 1
Query: 313 IPTLVIFGGEDTLAPAETVASLQERLV---RGGTVSETKIIPGQPRGFVLRG-GGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
IP L+ G + A +E +L + T + + Q GF A +A A++L W+ H+H +++ + WWP+G+ F TW +R +W + RP RPP V + +GL++ RRTF+LP RM L ++IE+F +IWEV+
Sbjct: 197 IPLLLQLGEKSPYAASEAYQTLLSSCAANPQAATALKASLFVNQQSGFAFSNITDEDAATQAIAEILDWLVQHLHRF-------QVAAATSDTDPWWPQGRNGPFFNVGLRTWQESRASWLMATQTRPPRPPPVPAHLLFDGLSSVRRTFDLPQRMRLGDVIELFAEIWEVQQ 362
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Match: A0A484E7L0_BRELC (DLH domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7L0_BRELC) HSP 1 Score: 85.9 bits (211), Expect = 1.530e-15 Identity = 48/173 (27.75%), Postives = 80/173 (46.24%), Query Frame = 1
Query: 313 IPTLVIFGGEDTLAPAETVASLQERLVRGGTVS---ETKIIPGQPRGFVLRG-GGAQAVKEAHAQLLGWVCTHVHANSGSWEVGRLSRSVLTESDWWPEGKGRSFRPAARETWDRARETWRAQRRPRPSRPPRVSYDSVVEGLAATRRTFELPGRMTLPEIIEVFTDIWEVES 819
+P L+ G + A ++ +L + +T + Q GF A +A A++L W+ H+H +++ + WWP+G+ F W +R W + RP RPP V + +GL++ RRTF+LP RM L ++IE+F +IWEV+
Sbjct: 194 VPILLQIGAKSPYAASKAYKALSSSCAANPLTAATFKTSLFDNQRSGFAFSNITDEDAATQAIAEILDWLVQHLHRF-------QMAAATSNTDSWWPQGRNGPFFNVGLRAWQESRGNWLRATQTRPPRPPPVPAHLLFDGLSSVRRTFDLPHRMRLGDVIELFAEIWEVQQ 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1525.1 >prot_P-fluviatile_contig12.1525.1 ID=prot_P-fluviatile_contig12.1525.1|Name=mRNA_P-fluviatile_contig12.1525.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=202bp MESNGTARQGLFDAGVAFDPTVPSAGSRTRIPTLVIFGGEDTLAPAETVAback to top mRNA from alignment at P-fluviatile_contig12:2683279..2688494+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1525.1 ID=mRNA_P-fluviatile_contig12.1525.1|Name=mRNA_P-fluviatile_contig12.1525.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5216bp|location=Sequence derived from alignment at P-fluviatile_contig12:2683279..2688494+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2683279..2688494+ >mRNA_P-fluviatile_contig12.1525.1 ID=mRNA_P-fluviatile_contig12.1525.1|Name=mRNA_P-fluviatile_contig12.1525.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1212bp|location=Sequence derived from alignment at P-fluviatile_contig12:2683279..2688494+ (Porterinema fluviatile SAG_2381)back to top |