mRNA_P-fluviatile_contig12.1514.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE) HSP 1 Score: 565 bits (1456), Expect = 2.300e-185 Identity = 331/623 (53.13%), Postives = 393/623 (63.08%), Query Frame = 2
Query: 431 IDGLEPGNGGSIADRLACPAATADAVVDEMLGDMPAPPGAGWG-QRDLLWRQRRSMLQKITLVVVAAGVFVLVLVGERLFN--GPSAFARRPLPHSRVRGDDADKGRDTPGLHGGGDGLGGISDATASAXXXXXXXXASWTGYVSGCTASPNGFVYGGDPGKVLTFTRRXXXXXXXXXXXXXXXXXXXVGVDSPALPDVLRWFWKLKHDRGVLAYEVSALETRRDVGKKTGWGVFFVSNVGRHKPFPPPGPAEVPWDPSSFNFYRAGPSEFLLSYTPSFRHEREEAA------KAAARLGEFGVAAQADTDAVAPGALSVA---AAIEEGKAMVSLAALRGVGGEPDRAAAXXXXXXAKTGLESVI-----SVKCGEASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQ---CWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTGRAFLLPRQPLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWRTKISVSADHFDRIAEGCL 2239
+DG P +A+ C A +E G GAG G R+ W R ++ K L +AAG L++ + L G SA + RPL H D+ + +GG D G + A A+W V+GCT +GFVYGG+ G VLTF R+ P+LP VLRWFW LKH+RGVLAYEV+ L RRDVG++TGW V F SNVGRHKPFPP GPAE PWDP +FNFY+A P EF+LSYTPSFR+ERE AA + GV +AD +A A A AA+ EGK + +A RG G GL+ + +V CGEASTASPP+DAVLVN+RPVG VSLLL PGYPHSHNQRA A SLAVA+DFAEAL DPGFRLGFNSAGSSASVNHLHFQ CWYFDAGP GLAIE++KT H ATVPL R S K AA D+++VH L +GYPIRALV+HTLGKDLEA GE IEKCV+FLVEENTPHT+VFSTGR F+LPRQ L EPPFAVVPGFPEVSGE+IVT+E+DF TI+AD I+EWWR K++V ++HFDRI +GCL
Sbjct: 59 VDGNRPAPAVELAEGHCC-----SAPANEPAG---GTSGAGDGVHRERYWPNGRRLVGKTILGTLAAGTLTLLVASDGLTTMLGSSAKSPRPLSHRHRTVFDSAAQQTGRYDYGGRDATGRGAGGAAGT--------AAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAAA-----AAAGHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPPAGPAESPWDPYAFNFYKASPLEFVLSYTPSFRYEREIAAAXXXXGRRTQAEDNGGVLVEADVEAAGSAAAKAARGSAAVGEGKTVTITSARRGGG----------------VGLQMNVDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQAAGCWYFDAGPRGLAIESSKTRHLATVPLSRASFSPSAK-GENAADKEDSLEVHVL-QGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 642
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI) HSP 1 Score: 555 bits (1430), Expect = 8.490e-183 Identity = 326/565 (57.70%), Postives = 382/565 (67.61%), Query Frame = 2
Query: 617 VVAAGVFVLVLVGERLFNGPSAFARRPLPHSRVRGDDADKGRDTPGLH--GGGDGLGGISDATASAXXXXXXXXASWTGYVSGCTASPNGFVYGGDPGKVLTFTRRXXXXXXXXXXXXXXXXXXXVGVDSPALPDVLRWFWKLKHDRGVLAYEVSALETRRDVGKKTGWGVFFVSNVGRHKPFPPPGPAEVPWDPSSFNFYRAGPSEFLLSYTPSFRHERE--EAAKAAARLGEF--GVAAQA--------DTDAVAPGALSVAAA-----IEEGKAMVSLAALRGVG-GEPDRAAAXXXXXXAKTGLESVI-SVKCGEASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRS---RGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTGRAFLLPRQPLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWRTKISVSADHFDRIAEGCL 2239
++++G L++ E L + AR P P S D G + GG D G + A A A+W V+GCT +GFVYGG+ G VLTF R+ XXXXXX P+LP VLRWFW LKH+RGVLAYEV+ L RRDVG++TGWGV F SNVGRHKPFPP GPAE PWDPS+FNFY+A P EF+LSYTPSFR+ RE EAA G QA +TDA A G+ + AA + EGKA+ +ALRG G G P + L+ V +V CGEASTASPP+DAVLVN+RPVG VSLLL PGY HSHNQRA A SLAVA+DFAEAL DPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIE++KT H ATVPL R S G+ AA D+++VH L +GYPIRALV+HTLGKDLEA GE IEKCV+FLVEENTPHT+VFSTGR F+LPRQ L EPPFAVVPGFPEVSGE+IVT+E+DF TI+AD I+EWWR K++V ++HFDRI +GCL
Sbjct: 19 ILSSGTLTLLVASEGLTTILGSPARSPPPLSHRHRTVFDSAAQQTGRYDYGGRDATGRDAGGAAGA--------AAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAXXXXXX----AGHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRYGREIPEAASXXXXXXXXXXGRRTQAKDNDGVSVETDAKAAGSTAAKAARGAAEVGEGKAVAITSALRGGGVGLPMK-------------LDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYAHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIESSKTRHLATVPLPRSSFSPPAEGEN----AADKEDSLEVHVL-QGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 553
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A843VDM2_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VDM2_COLES) HSP 1 Score: 90.1 bits (222), Expect = 4.280e-15 Identity = 79/256 (30.86%), Postives = 121/256 (47.27%), Query Frame = 2
Query: 1517 TASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTG--RAFLLPR------------QPLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWRTKISVSADHFDRIAEGCLN 2242
T+ P V +N+ P+ + ++L P QR ESL +A+ A+ A P FRLG+NS G+ A++NHLHFQ +Y LA+E A+T + S G V+V L E YP+R LV+ L LE + V+ FL E N P+ I+ S R FL P+ Q L++ V P E+SG +++ +++D+ S +D ++S+SA+ F + E LN
Sbjct: 154 TSQRPHGMVAINVSPIEYGHVVLIPRTLDCLPQRIDCESLLLALHMADEA-ASPYFRLGYNSLGAFATINHLHFQAYYLGMP---LAVEKAQTRR-----IMALSNG---------------VNVFQLLE-YPVRGLVFEGLST-LEDLSIVVSDACIFLQENNIPYNILISDSGKRVFLFPQCYAEKQALGEVSQELLDT--QVNPAVWEISGHMVLKRKKDYEEASEEDACRLL-AEVSLSAERFQEVEEYILN 380
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: X6NVT4_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NVT4_RETFI) HSP 1 Score: 90.1 bits (222), Expect = 9.090e-15 Identity = 71/257 (27.63%), Postives = 116/257 (45.14%), Query Frame = 2
Query: 1487 VISVKCGEASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPG---FRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEG-YPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTGRAFLLPR-QPLVEPPFAVVPGFPEVSGEIIVTKEEDF-RTISADDIFEWWRTKISVSADHFDRIAEGCL 2239
V S++C A +LVN P+G S L P + Q E L V + F ++ FR+GFNS G+ ASVNH HFQ W D G + +T+H +P A + + + T ++ YPIR L+Y + + E + CV FL+E + PH ++ S +L R + + + + GF +VSG I V E+ F ++ + +++ + +ISV +D + C+
Sbjct: 323 VDSIQCDPFVFAKTDTHLLLVNRFPIGNYSGLFTPYFWQKLPQVLTKELLHVGLQFNAMFLSQSHKGTFRVGFNSLGAMASVNHFHFQFWKIDTG-----LLPVETLHKTPIPT----------------ANKQHLQIFTFNDNVYPIRTLIYPIVTGNRTL--ETLWHCVKFLIESDIPHNLMISRQFVYLFVRNEQQLTSNYPIFYGFSDVSGWITVLNEQMFDHLLTFEMLYQDMQQRISVQPSKWDFVYSNCV 556
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A7I8KHT5_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KHT5_SPIIN) HSP 1 Score: 88.6 bits (218), Expect = 1.460e-14 Identity = 78/254 (30.71%), Postives = 121/254 (47.64%), Query Frame = 2
Query: 1517 TASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTG--RAFLLPR------------QPLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWR--TKISVSADHFDRIAE 2230
T SPP + V +N+ P+ + +LL P Q+ +ES +A+ A A P FRLG+NS G+ A++NHLHFQ +Y +E A T A R++G K V V +L YP+R LV+ G DL+A+ +++ FL E NTP ++ S R F+ P+ Q L+E V P E+SG +++ + +D+ S D WR ++S+S + F + E
Sbjct: 168 TTSPP-NVVAINVSPIEYGHVLLIPRVLECLPQKIDSESFFLAVKMA-AEAGSPYFRLGYNSLGAFATINHLHFQAYYLSVP---FPVEKAPTKKIA------RTKGGPTK---------GGVQVSSL-MSYPVRGLVFEG-GSDLQALSDLVSNVCVFLQENNTPFNVLISDSGKRIFVFPQCYAEKQALGEVSQELLET--QVNPAAWEISGHMVLKRRKDYDDASEDYA---WRLLAEVSLSEERFKEVQE 394
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A6I9QJD0_ELAGV (GDP-L-galactose phosphorylase 2 isoform X1 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QJD0_ELAGV) HSP 1 Score: 86.7 bits (213), Expect = 5.900e-14 Identity = 74/249 (29.72%), Postives = 118/249 (47.39%), Query Frame = 2
Query: 1520 ASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTG--RAFLLP-----RQPLVEPPFAVV-----PGFPEVSGEIIVTKEEDFRTISADDIFEWWR--TKISVSADHFDRI 2224
A+PP V +N+ P+ + +LL P QR AES +A+ A A +P FRLG+NS G+ A++NHLHFQ +Y +E A T +P+ + SG K+ +L YP+R LVY G L+ + +V+ +L E N P ++ S R FL P +Q L E P ++ P E+SG +++ + +D+ + D WR ++S+S + F +
Sbjct: 167 ANPPS-VVAINVSPIEYGHVLLIPRVLDCLPQRIDAESFLLALHMA-AEAGNPCFRLGYNSLGAFATINHLHFQAYYLSVP---FPVEKAPTRE---IPIAKGLADSGVKI--------------SLLMNYPVRGLVYEG-GNTLKDLADVVANSCIWLQENNIPFNVLISDSGRRIFLFPQCYAEKQALGEVPQELLDTQVNPAVWEISGHMVLKRRKDYEEATEDYA---WRLLAEVSLSEERFQEV 389
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A9VA94_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VA94_MONBE) HSP 1 Score: 85.9 bits (211), Expect = 8.430e-14 Identity = 73/251 (29.08%), Postives = 114/251 (45.42%), Query Frame = 2
Query: 1496 VKCGEASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFST-----------GRAFLLPRQPLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWRTKISVSADHF 2215
V+CG A + AVL+N P+G++S LL P Q ++L FA+ L +P RL FNS + ASVNHLHFQ W FDA LA+E A R+ G+++ +H L + P+ L V+++ ++ L + P +VFS +++ RQ + P + GFPEVSGE+I T + +++A +I + WR + +S D +
Sbjct: 166 VRCGPV--ADLHQHAVLINPFPLGWLSGLLVPYLLEHRPQVMTRDALTAGFAFAQRLQ-NPYTRLAFNSLEAGASVNHLHFQFWQFDAP---LAVELA---------TRQLYFRFGEELT-----------LHILPDA-PVHTLAVEYFRTTATGAIVVVQRIIDLLYQHVLPFNLVFSRYYVNAGISPSRSTVYIVLRQRMHPFPGINI-GFPEVSGELICTSSSIYHSVTAHNISQHWRDNVRLSGDRY 388
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A2K3D0V9_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D0V9_CHLRE) HSP 1 Score: 85.5 bits (210), Expect = 3.030e-13 Identity = 122/454 (26.87%), Postives = 183/454 (40.31%), Query Frame = 2
Query: 1007 LPDVLRWFWKLKHDRGVLAYEVSALETRRDVGKKTGWGVFFVSNVGRH-KPFPPPGPAE---VPWDPSSFNFYRAGPSEFLLSYTPSFRHEREEAAKAAARLGEFGVAAQADTDAVAPGALSVAAAIEEGKAMVSLAALRGVGGEPDRAAAXXXXXXAKTGLESVISVKCGEASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEAL-------MADPGFRLGFNSAGSSASVNHLHFQCWYFDAG-----------PGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHT-LGKDLEAVGEVIEKCVNFLVEENTPHTIVFSTG--RAFLLP-----RQPLVEPP-----FAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWRTK----ISVSADHFDRIAEGCLN*SA 2251
L V+ W+ + DRG+ Y+VS ETR G G N GR K P A+ P+DP+ F+F +A E L ++ QAD A A A + AA + ++ A + AK+ L + ++ S + VL+N+ P+ +LL P Q ++ +A+ FA L FR+G+NS G+ A++NHLHF ++ A PG LA A + R RG+ ++VA A +AG +V V L GYP+R+ V G LEAV V+ + + + N P I+ S G R FL P RQ E P V P E++G +++ + EDF E W + +S+S + F +A C SA
Sbjct: 239 LEGVVMALWEDRADRGMFRYDVSQCETRVLPGPA---GFVAQLNEGRATKKRPTEFSADRVMQPFDPARFHFNKAAMGEVLFAF-------------------------QADATASATSATATAAP----RLLLPSAPM------------------AKSALLA--------SNPVSGSPNLVLINVSPIDHCHVLLVPRVLDCLPQALTPDTALLALQFAAELGGSSSSRSGSGAFRVGYNSLGAFATINHLHFHAYHLPAALPCERAPTCPLPGALARPLAASQQP-------RKRGA-EEVAGAGSAG--SVRVSRL-VGYPVRSFVVEAEAGAALEAVAAVVARAADAMQAANQPFNIIASDGGRRVFLFPQCYAERQAAGEVPEELLDTGVNPASFEIAGHLVLKRAEDFALAD-----EAWAARLLSGVSLSEERFMEVANMCFGSSA 618
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A388KS14_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KS14_CHABU) HSP 1 Score: 83.6 bits (205), Expect = 4.100e-13 Identity = 78/261 (29.89%), Postives = 117/261 (44.83%), Query Frame = 2
Query: 1508 EASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMAD-PGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHTATVPLRRRSRGSGDKVAAAAAAGRDAVDVHTLDEGYPIRALVYHTLGKDLEAVGEVIEKCVNFLVEENTPHTIVFST--GRAFLLPR------------QPLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWR--TKISVSADHFDRIAEGCL 2239
EA +L+N+ P+ + +LL P QR + ++ A+ A + AD P FR+G+NS G+ A+VNHLHFQ +Y A+E A TM AT G D A VH L + YP+R LV LG LE + V+ + L + N P I + R FL P+ + L+E V P E+SG I++ + ED+ I+ + WR ++S+ + F + CL
Sbjct: 153 EAGPRRNSPSLILINVSPIEYGHVLLVPRVADCIPQRLSPDTFLEALIIA--IEADSPFFRVGYNSLGAFATVNHLHFQAYYLMKP---FAVERAPTMEIAT--------GGHDHSLA----------VHELKD-YPVRGLVLE-LGDSLEELARVVARTAQRLQDRNIPFNIFIADKGARVFLYPQCFAERQANNLVPEDLME--MQVNPAIWEISGHIVLKRREDYENITE---AKTWRLLAEVSLDEEQFQEVKAICL 383
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Match: A0A8J4BK08_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BK08_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 4.700e-13 Identity = 87/292 (29.79%), Postives = 131/292 (44.86%), Query Frame = 2
Query: 1481 ESVISVKCGEASTASPPEDAVLVNLRPVGFVSLLLAPGYPHSHNQRAAAESLAVAMDFAEALMADPGFRLGFNSAGSSASVNHLHFQCWYFDAGPGGLAIEAAKTMHT----ATVPLRRRSRGSGDKVAAAAAAG---------------RDAVDVHTLD-EGYPIRALVYHTL-------GKDLEAVGEVIEKCVNFLVEENTPHTIVFSTG--RAFLLP-----RQ-----PLVEPPFAVVPGFPEVSGEIIVTKEEDFRTISADDIFEWWRTKISVSADHFDRIAEGCL 2239
++V ++ G+A ++ VLVN+ P+ + +LL P + Q + E++ +AM FA L P FR+G+NS G+ A++NHLHFQ +Y P + E A T+ AT P+ GSG+ AAA A G R A VH +GYP+ A V + +EAV V+ L N P I+ S+G R FL P RQ PL V P E++G +++ + D+ + D + S+S D F +A C
Sbjct: 290 QTVAPLRGGDADISN----LVLVNVSPIDYGHVLLVPRVLDNLPQALSTETVLLAMQFAREL-GSPNFRVGYNSLGAYATINHLHFQSYYL---PMQMPCEIAATVPLPGGLATPPVP----GSGEGGAAAYATGALQISRKRALDLSIRRSAGSVHVSRLQGYPVNAFVVEAVEDYDNCDAGGMEAVAAVVGTAAERLQAANQPFNILISSGGRRVFLFPQCFAERQAAGVIPLELLETGVNPAAFEIAGHLLLKRAHDYEGATEDFAIRLL-AQASLSVDRFLAVANMCF 568 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1514.1 >prot_P-fluviatile_contig12.1514.1 ID=prot_P-fluviatile_contig12.1514.1|Name=mRNA_P-fluviatile_contig12.1514.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=657bp MFPSRLLCSAGPHLRRQMMHHRRIAGGGKPHQPSSTGATTSSSGSVERSSback to top mRNA from alignment at P-fluviatile_contig12:2512398..2519971- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1514.1 ID=mRNA_P-fluviatile_contig12.1514.1|Name=mRNA_P-fluviatile_contig12.1514.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7574bp|location=Sequence derived from alignment at P-fluviatile_contig12:2512398..2519971- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2512398..2519971- >mRNA_P-fluviatile_contig12.1514.1 ID=mRNA_P-fluviatile_contig12.1514.1|Name=mRNA_P-fluviatile_contig12.1514.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3942bp|location=Sequence derived from alignment at P-fluviatile_contig12:2512398..2519971- (Porterinema fluviatile SAG_2381)back to top |