mRNA_P-fluviatile_contig12.1487.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5JMC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC7_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.220e-63 Identity = 105/137 (76.64%), Postives = 119/137 (86.86%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GKKLLWGAS+AGPLRHGLE GRTRKQTREM G E PG GET DP+EALLAT+LETGG IV++YICNSLVKE+W+EEQTRRMEEM RRE+Q+VLG ++Q F AEV SGSSQP PDPQ
Sbjct: 137 LEELKYDPADDRYPRGLEGKKLLWGASNAGPLRHGLESGRTRKQTREMQGVGEMPGAGETSDPQEALLATILETGGTGIVEDYICNSLVKEQWDEEQTRRMEEMYRREMQEVLGPKQQTFGAEVDASGSSQPLPDPQ 273
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5L1D0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D0_9PHAE) HSP 1 Score: 205 bits (521), Expect = 4.630e-63 Identity = 105/137 (76.64%), Postives = 118/137 (86.13%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RY G++GKKLLWGAS+AGPLRHGLE GRTRKQT EM G E PGPG+TPDPEEALLAT+LE GG IV++YICNSLVKE+W+EEQ RRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 103 LEELKYDPADDRYSRGLEGKKLLWGASNAGPLRHGLESGRTRKQTWEMQGAGEMPGPGQTPDPEEALLATILENGGTGIVEDYICNSLVKEQWDEEQIRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 239
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5JMP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP4_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.330e-62 Identity = 104/137 (75.91%), Postives = 117/137 (85.40%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GKKLL GA +AGPLRHGLE GRTRKQTREM G E PGPGET PEEALLAT+LETGG IV++Y+CNSLVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGS QP PDPQ
Sbjct: 49 LEELKYDPADDRYPHGLEGKKLLCGAWNAGPLRHGLESGRTRKQTREMQGAGEMPGPGETSYPEEALLATILETGGTGIVEDYMCNSLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSLQPLPDPQ 185
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE) HSP 1 Score: 211 bits (538), Expect = 2.410e-62 Identity = 108/137 (78.83%), Postives = 120/137 (87.59%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GKKLLWGAS+AGPLRHGLE GRTRKQTREM G E GPGETPDPEEALLAT+LETGG IV++YICNSLVKE+W+EEQTR MEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 59 LEELKYDPADDRYPRGLEGKKLLWGASNAGPLRHGLESGRTRKQTREMQGAGEMSGPGETPDPEEALLATILETGGTGIVEDYICNSLVKEQWDEEQTRHMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 195
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5K1G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G4_9PHAE) HSP 1 Score: 206 bits (523), Expect = 1.330e-61 Identity = 106/137 (77.37%), Postives = 119/137 (86.86%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GKKLLWGAS+AGPLRHGLE GRTR QTREM G E GPGETP P+EALLAT+LETGG IV++YICNSLVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 326 LEELKYDPADDRYPRGLEGKKLLWGASNAGPLRHGLESGRTRYQTREMQGAGEMSGPGETPVPKEALLATILETGGAGIVEDYICNSLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 462
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5JNJ1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ1_9PHAE) HSP 1 Score: 204 bits (518), Expect = 2.560e-61 Identity = 104/137 (75.91%), Postives = 118/137 (86.13%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GK+LLWGA++AGPLRHGLE GRTRKQTREM G E P PGET DPEEALLAT+LETGG V++YICNSLVKE+W+EEQTRR EEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 105 LEELKYDPADDRYPRGIEGKELLWGAANAGPLRHGLESGRTRKQTREMQGAGEMPRPGETTDPEEALLATILETGGTGTVEDYICNSLVKEQWDEEQTRRTEEMYRREVQEVLGPEQQAFGAEVDASGSSQPLPDPQ 241
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5L0R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R5_9PHAE) HSP 1 Score: 194 bits (492), Expect = 2.830e-59 Identity = 103/137 (75.18%), Postives = 116/137 (84.67%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GKKLL GAS+AGPLRHGLE GRTRKQTREM G E PGPGETP+ EALLAT+L+TGG IV+ YIC LVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 80 LEELKYDPADDRYPRGLEGKKLLLGASNAGPLRHGLESGRTRKQTREMQGAGEMPGPGETPN--EALLATILQTGGTGIVEYYICKPLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 214
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5KZ24_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ24_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.090e-58 Identity = 104/137 (75.91%), Postives = 118/137 (86.13%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+EELKYDPAD RYP G++GKKLLWGAS+AGPLRHGLE GRTRKQTREM G E PGPGETPD +EALLAT+LET G V++YICNSLVK +W++EQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 111 LEELKYDPADDRYPCGLEGKKLLWGASNAGPLRHGLESGRTRKQTREMQGAGEMPGPGETPDMKEALLATILETSGTGSVEDYICNSLVKGQWDKEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 247
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5JRY6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY6_9PHAE) HSP 1 Score: 201 bits (510), Expect = 2.400e-58 Identity = 105/137 (76.64%), Postives = 117/137 (85.40%), Query Frame = -3
Query: 2 IEELKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 412
+E LKYDPAD RYP G++GKKLLWGAS+AGPLRHGLE GRTRKQTREM PGPGETPDPEEALLAT+LETGG IV++Y CNSLVK +W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 128 LEGLKYDPADERYPRGLEGKKLLWGASNAGPLRHGLESGRTRKQTREM------PGPGETPDPEEALLATILETGGTGIVEDYTCNSLVKGQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 258
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Match: A0A6H5JI90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI90_9PHAE) HSP 1 Score: 199 bits (506), Expect = 2.850e-58 Identity = 102/134 (76.12%), Postives = 116/134 (86.57%), Query Frame = -3
Query: 2 LKYDPADARYPSGVQGKKLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 403
LKYDPAD YP G++GKKLLWGAS+AGPLRHGLE GRTRK+ REM G E P PGETPDPEEALLAT+L+TGG IV++YIC+SLVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 306 LKYDPADDSYPRGLEGKKLLWGASNAGPLRHGLESGRTRKKAREMQGAGEMPVPGETPDPEEALLATILKTGGTGIVEDYICSSLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 439 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1487.1 >prot_P-fluviatile_contig12.1487.1 ID=prot_P-fluviatile_contig12.1487.1|Name=mRNA_P-fluviatile_contig12.1487.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=143bp AAGLVEVAKTRCRRPRPRMPAPPRPTPSAARAWTSPPSGASAPPPTVPSQback to top mRNA from alignment at P-fluviatile_contig12:2279835..2280263+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1487.1 ID=mRNA_P-fluviatile_contig12.1487.1|Name=mRNA_P-fluviatile_contig12.1487.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=429bp|location=Sequence derived from alignment at P-fluviatile_contig12:2279835..2280263+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2279835..2280263+ >mRNA_P-fluviatile_contig12.1487.1 ID=mRNA_P-fluviatile_contig12.1487.1|Name=mRNA_P-fluviatile_contig12.1487.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=858bp|location=Sequence derived from alignment at P-fluviatile_contig12:2279835..2280263+ (Porterinema fluviatile SAG_2381)back to top |