mRNA_P-fluviatile_contig12.1485.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE) HSP 1 Score: 741 bits (1914), Expect = 5.440e-246 Identity = 416/766 (54.31%), Postives = 509/766 (66.45%), Query Frame = 3
Query: 648 RVATWNVRTMSIQGCCRTWARSLFARRGEEPRHFSDRAARDEEAWADRVRSRGLQGVLLRIRERWDTWCGASS*RIDMPQVHVHNGLCQRAPDGDAV*DVR----------PRRSSQLCFSICPNRSQPGRHQACVLSSLAALVRRIPTKERVYVLMDANARTGKRIEGERIQEKVLGAYGRDELNDNGTLLLEFAIDNKFALMNTFFRTRKGGVAHTYNGVSSDATNHYKRIDYILTRQAHRGSVHNVMVHPEPPSPAKADSDHNMVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFERA--DGLATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAALRAA--PSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSEGRDGVG 2903
RVATWNVRT+++ G + R+ ++ E R E A R R+ CG + + + V LC+ + D R R + + P + L +LVRRIP+KE VYVL+DANARTG R++G +V+G YGRDELNDNG LLL FA +N+ AL NTFF TRKGG+ HTYNGVS N KR+DYILTRQAH G V NV+V P+P P KADSDHNMVVATV+LG RLAHNR R Q+QF+RQ+L+ R V + N + + TA E A FT ALL+AA+T L R R QEW +TP +A++ AL +RREARR + N +++TWR L AAC+ V TAV+ I+AHLD YV ELE +Y DRDMRGLYQ LKRSVG SG+ +GG Q++ ++DGVLLRN +IL+RW R F++LLN KSP L P I+E V QR A R P EE +A ++NWKAPG DSLP ELLKID +EP VL + H I+++VW+GG P EWKDA I VL+ KGD+SNCNNYR ISLLSH+GKV +KI+T+RLS + E N ILPEEQCGFRPGRSTVDMLFVVRRLQELGR++KIPLYMCFVDL KAYDSVDRE+LWKVLARAGIP ++I++IRQFHDGMRARVRMD+GELSDW V Q +RQG VLSPLLFNIFF +EVV+ RFSED ++LR LV L EG+ G
Sbjct: 59 RVATWNVRTLAVIGV-NGYGRA-YSVLHEAARQDVSVVGMQETRRAGRTE---FAAAGFRV-----FCCGTETGGVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGG--DGRVIGMYGRDELNDNGMLLLNFATENRLALTNTFFETRKGGIWHTYNGVSG---NDCKRLDYILTRQAHHGRVSNVVVIPQPVRPVKADSDHNMVVATVNLGGRLAHNRAVRTKPKQKQFNRQELQFEAARCAVTNRLLLNLDTRLDERTTTAAELATDFTNALLDAARTTLGEEPRRRRTQEWCETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACQGVATAVETVIHAHLDAYVTELEEIYKDRDMRGLYQRLKRSVGLSGRQAGGQQFITNKDGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRQATRDTQRLGDVPKLEEVARATKGLKNWKAPGHDSLPAELLKIDD---DEPFVLGHLHTILVKVWNGGDFPLEWKDATITVLYNKGDRSNCNNYRRISLLSHVGKVPIKIITNRLSAFGEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWLFVTQRVRQGCVLSPLLFNIFFTEVLEVVIIRFSEDDVVLRSLVCLEEGKAEAG 806
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE) HSP 1 Score: 718 bits (1854), Expect = 3.880e-233 Identity = 382/621 (61.51%), Postives = 455/621 (73.27%), Query Frame = 3
Query: 1035 LAALVRRIPTKERVYVLMDANARTGKRIEGERIQEKVLGAYGRDELNDNGTLLLEFAIDNKFALMNTFFRTRKGGVAHTYNGVSSDATNHYKRIDYILTRQAHRGSVHNVMVHPEPPSPAKADSDHNMVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFERADGL--ATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAA--LRAAPSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSE 2885
L +LVRR P KE ++VLMDANA+TG I GE E +G YGR+ELN+NG LLL FA DN+ A++NTFF TR+GG+ HT+NG S + +DYILTRQAHR V N+ V P+P P +ADSDHN+VVATVDLG RLAHNRP R +RQF+RQ L++ R V Q+F N G T E A+ FT ALL AA+TEL R R EW T AA +A+ TAL +RR AR FK + +TWR L A CK V+ + IY HL+RYV ELE +Y DRDMRGLYQHLKRS G SG+ +GG Q+V DE+GVLLRN+ IL+RW R F +LLN KSP L P +VE+V QRPA A L A P EE A + NWKA G D L ELLK+DG +EP+VL+ I + VW+GG +PQEWKDAIIKVL+KKGD+SNCNNYRGISLLSH+GKVL K +T+RLS +CE N ILPEEQCGFRPGRSTV MLFVVRRLQELGR+R+IPLYMCF+DL KAYDSVDRELLWKVLARAGIP EMI +IR+FH GMRARVR D+GELSDWF V QGLRQG +SPLLFN+FFAA +E+++ RFS+D +I+RDLV L E
Sbjct: 149 LDSLVRRTPAKEYLFVLMDANAQTGGGIAGEN--EGTMGEYGRNELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTFNGPSGRER---RCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDLQVEAARWAVSQRFLCNLLARSGAPATTTQEMAKEFTEALLGAAETELSEEPRRRRTTEWNMTTAARTALATALDKRRAARHSFKAGPNAATWRILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGD--DEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRSNCNNYRGISLLSHVGKVLAKTITNRLSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKE 762
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE) HSP 1 Score: 723 bits (1865), Expect = 3.040e-231 Identity = 384/621 (61.84%), Postives = 456/621 (73.43%), Query Frame = 3
Query: 1035 LAALVRRIPTKERVYVLMDANARTGKRIEGERIQEKVLGAYGRDELNDNGTLLLEFAIDNKFALMNTFFRTRKGGVAHTYNGVSSDATNHYKRIDYILTRQAHRGSVHNVMVHPEPPSPAKADSDHNMVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFERADGL--ATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAA--LRAAPSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSE 2885
L +LVRRIP KE ++VLMDANA+TG I GE E +G YGR+ELN+NG LLL FA DN+ A++NTFF TR+GG+ HT+NG S + +DYILTRQAHR V N+ V P+P P +ADSDHN+VVATVDLG RLAHNRP R +RQF+RQ L++ R V Q+F N G T E A+ FT ALL AA+TEL R R EW T AA +A+ TAL +RR AR FK + +TWR L A CK V+ + IY HL+RYV ELE +Y DRDMRGLYQHLKRS G SG+ +GG Q+V DE+GVLLRN+ IL+RW R F +LLN KSP L P +VE+V QRPA A L A P EE A + NWKA G D L ELLK+DG +EP+VL+ I + VW+GG +PQEWKDAIIKVLHKKGD+SNCNNYRGISLLSH+GKVL K +T+RLS +CE N ILPEEQCGFRPGRSTV MLFVVRRLQELGR+R+IPLYMCF+DL KAYDSVDRELLWKVLARAGIP EMI +IR+FH GMRARVR D+GELSDWF V QGLRQG +SPLLFN+FFAA +E+++ RFS+D +I+RDLV L E
Sbjct: 436 LDSLVRRIPAKEYLFVLMDANAQTGGGIAGEN--EGTMGEYGRNELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTFNGPSGRER---RCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDLQVEAARWAVSQRFLCNLLARSGAPATTTQEMAKEFTEALLGAAETELSEEPRRRRTTEWNMTTAARTALATALDKRRAARHSFKAGPNAATWRILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGD--DEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLHKKGDRSNCNNYRGISLLSHVGKVLAKTITNRLSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKE 1049
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE) HSP 1 Score: 718 bits (1854), Expect = 2.110e-227 Identity = 382/621 (61.51%), Postives = 455/621 (73.27%), Query Frame = 3
Query: 1035 LAALVRRIPTKERVYVLMDANARTGKRIEGERIQEKVLGAYGRDELNDNGTLLLEFAIDNKFALMNTFFRTRKGGVAHTYNGVSSDATNHYKRIDYILTRQAHRGSVHNVMVHPEPPSPAKADSDHNMVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFERADGL--ATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAA--LRAAPSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSE 2885
L +LVRR P KE ++VLMDANA+TG I GE E +G YGR+ELN+NG LLL FA DN+ A++NTFF TR+GG+ HT+NG S + +DYILTRQAHR V N+ V P+P P +ADSDHN+VVATVDLG RLAHNRP R +RQF+RQ L++ R V Q+F N G T E A+ FT ALL AA+TEL R R EW T AA +A+ TAL +RR AR FK + +TWR L A CK V+ + IY HL+RYV ELE +Y DRDMRGLYQHLKRS G SG+ +GG Q+V DE+GVLLRN+ IL+RW R F +LLN KSP L P +VE+V QRPA A L A P EE A + NWKA G D L ELLK+DG +EP+VL+ I + VW+GG +PQEWKDAIIKVL+KKGD+SNCNNYRGISLLSH+GKVL K +T+RLS +CE N ILPEEQCGFRPGRSTV MLFVVRRLQELGR+R+IPLYMCF+DL KAYDSVDRELLWKVLARAGIP EMI +IR+FH GMRARVR D+GELSDWF V QGLRQG +SPLLFN+FFAA +E+++ RFS+D +I+RDLV L E
Sbjct: 640 LDSLVRRTPAKEYLFVLMDANAQTGGGIAGEN--EGTMGEYGRNELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTFNGPSGRER---RCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDLQVEAARWAVSQRFLCNLLARSGAPATTTQEMAKEFTEALLGAAETELSEEPRRRRTTEWNMTTAARTALATALDKRRAARHSFKAGPNAATWRILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGD--DEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRSNCNNYRGISLLSHVGKVLAKTITNRLSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKE 1253
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5L1Q6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Q6_9PHAE) HSP 1 Score: 620 bits (1600), Expect = 1.330e-203 Identity = 326/518 (62.93%), Postives = 386/518 (74.52%), Query Frame = 3
Query: 1155 YGRDELNDNGTLLLEFAIDNKFALMNTFFRTRKGGVAHTYNGVSSDATNHYKRIDYILTRQAHRGSVHNVMVHPEPPSPAKADSDHNMVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFERA--DGLATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAALRAA--PSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDG 2696
YGRDELNDNG LLL FA +N+ AL NTFF TRKGG+ HTYNGVS N KR+DYILTRQAH G V NV+V P+P P KADSDHNMVVATV+LG RLAHNR R Q+QF+R++L+ R V +F N + + TA E A FT ALL+AA+T L R R QEW +TP +A++ L +RREARR + N +++T L AACK V TAV+ GIYAHLD YV ELE +Y DRDMRGLYQHLKRSVG SG+ +GG Q+V DE+GVLLRN +IL+RW R F++LLN KSP L P I+E V QRPAA R P EE +A ++NWKAPG DSLP ELLKID +EP VL + H I+++VW+GG + +EWKDA IKVLHKKGD+SNCNNYRG SLL H+GKV +KI+T+RLS +CE N ILPEEQCGFRPGRSTVDMLFVVRRLQELGR++KIPLYMCFVDL KAYDSVDRE+LWKVLA AGIP +I++IRQFHDG
Sbjct: 2 YGRDELNDNGMLLLNFATENRLALTNTFFETRKGGIWHTYNGVSG---NDCKRLDYILTRQAHHGRVSNVVVIPQPVRPVKADSDHNMVVATVNLGGRLAHNRAVRTKPKQKQFNRRELQFEAARCAVTNRFLLNLDTRLDERTTTAAELATDFTNALLDAARTTLGEEPRRRRTQEWCETPETRAALEQTLTKRREARRAMRGNWNSATRTVLKAACKGVATAVETGIYAHLDGYVTELEEIYKDRDMRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPHIIERVTQRPAARDTRRLGDVPRLEEVARATKGLKNWKAPGHDSLPAELLKIDD---DEPFVLGHLHTILVKVWNGGDILREWKDATIKVLHKKGDRSNCNNYRGTSLLPHVGKVPIKIITNRLSTFCEAN-ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLAGAGIPARLIEVIRQFHDG 512
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5K3W7_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W7_9PHAE) HSP 1 Score: 595 bits (1535), Expect = 6.380e-195 Identity = 313/500 (62.60%), Postives = 373/500 (74.60%), Query Frame = 3
Query: 1416 MVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFE-RADG-LATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAALRAA--PSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSEGRDGVG 2903
MVVATV+LG RLAHNR R Q+QF+R++L+ R +F N R D TA E A FT ALL+ A+T L R R QEW +TP A++ AL +RREARR + N +++TW L AACK V TAV+ GIYAHLD YV ELE +Y DRDM GL QHLKRSVG SG+ +GG Q+V DE+GVLLRN +IL+RW R F++LLN KSP L P I+E V QRPA R P EE +A ++NWKAPG DSLP ELLKID +EP VL + H I+++VW+GG +P+EWKDA IKVL+K GD+SNCNNYRGISLLSH+GKV +KI+T+RLS + E N ILPEEQCGFRPGRSTVDMLFVVRRLQELGR++KIPLYMCFVDL KAYDSVDRE+LWKVLARAGIP ++I++IRQFHDGMRARVRMD+GELSDW V QG+RQG VLSPLLFNIFFA +EVV+ RFSED ++LR LV L EG+ G
Sbjct: 1 MVVATVNLGGRLAHNRAVRTKPKQKQFNRRELQFEAARCAATNRFLLNLNTRVDERTTTAAELATDFTNALLDTARTTLGKEPRRRRTQEWCETPETREALEQALTKRREARRAMRGNWNSATWSVLKAACKGVATAVETGIYAHLDGYVTELEKIYKDRDMLGLCQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPHIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDD---DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKNGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFNEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWLFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRSLVCLKEGKTEAG 497
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5K556_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K556_9PHAE) HSP 1 Score: 580 bits (1496), Expect = 6.690e-188 Identity = 300/492 (60.98%), Postives = 367/492 (74.59%), Query Frame = 3
Query: 1416 MVVATVDLGSRLAHNRPTRNPSGQRQFSRQQLKIAGNRRLVIQKFRQNFERADG--LATAPETARSFTAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAALRAAPSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSE 2885
MVVATV+LG LAHNR R +QF+R++++ R V +F N + G TA E A FT ALL+AA+T L R R QEW +TP +A++ AL +RREA R + NR ++TWR L AACK V TAV+ GIYAHLD YV ELE +Y DRD++GLYQHLKRSVG +G+ + G Q+V DE+GVLLRN +IL+RW R F++LLN KSP L P I+E V QRPA +++NWKAPG DSLP ELLKID +EP VL + H I+++VW+GG + +EWKDA +KVL+KKGD+SNCNNYRGISLLSH+GKV +KI+T+RLS +CE N ILPEEQCGFRPGRSTVDMLFVVRRLQELGR++KIPLYMCFVDL KAYDSVDRE+ WKVLARAGIP ++I++IRQFHDG+RARVRMD+GELSDWF V QG+RQG VLSPLL NIFFA +EVV+ RFS+D ++LR LV L E
Sbjct: 1 MVVATVNLGGSLAHNRAVRTKPKLKQFNRRKVQFEAARCAVTYRFLLNLDTRLGERTTTAAELATDFTNALLDAARTTLGEEPRRRRTQEWCETPETRAALEQALTKRREAHRAMRGNRSSATWRVLKAACKGVATAVEPGIYAHLDGYVTELEEIYKDRDIQGLYQHLKRSVGLNGRQAEGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPAT------------------RLKNWKAPGHDSLPAELLKIDD---DEPFVLAHLHTILVKVWNGGDISREWKDATVKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMQWKVLARAGIPAKLIEVIRQFHDGLRARVRMDDGELSDWFFVTQGVRQGCVLSPLLSNIFFAEVLEVVVIRFSKDDVVLRSLVCLDE 471
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5JQV7_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV7_9PHAE) HSP 1 Score: 577 bits (1488), Expect = 3.820e-187 Identity = 295/445 (66.29%), Postives = 349/445 (78.43%), Query Frame = 3
Query: 1584 TAPETARSFTAALLEAAQTELPMGRRIPRM---QEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAALRAA--PSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSEGRDGVG 2903
TA E A FT ALL+AA+T L G PR QEW +TP +A++ AL +RREARR + N +++TWR L AACK V TAV+ GIYAHLD YV ELE +Y DRDMRG YQHLKRSVG SG+ +GG Q+V DE+GVLLRN +IL+RW R F++LLN KSP L P I+E V QRPA R P EE +A ++NWKAPG DSLP ELLKID +EP VL + H I+++VW+GG +P+EWKDA IKVL+KKGD+SNCNNYRGISLLSH+GKV +KI+T+RLS +CE N ILPEEQCGFRPGRSTVDMLFVVRRLQELGR++KIPLYMCFVDL KAYDSVDRE+LWKVLARAGIP ++I++IRQFHDGMRARVRMD+GELSDWF V QG+RQG VLSPLLFNIFFA +EVV+ RFSED ++LR LV L EG+ G
Sbjct: 120 TAAELATDFTNALLDAARTTL--GEEEPRRRRTQEWCETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGQYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDD---DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRSLVCLEEGKTEAG 559
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5J7L3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7L3_9PHAE) HSP 1 Score: 542 bits (1396), Expect = 1.880e-175 Identity = 271/404 (67.08%), Postives = 324/404 (80.20%), Query Frame = 3
Query: 1686 QTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAALRAA--PSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSEGR 2891
+TP +A++ AL +RREARR + N +++TWR L AACK V TAV+ G YAHLD YV ELE +Y DRDMRGLYQHLKRSVG SG+ +GG Q+V DE+GVLLRN +IL+RW R F++LLN KSP L P I+E V QRPA R P EE +A ++NWKAPG DS+ ELLKID +EP VL + H I+++VW+GG +P+EWKDA IKVL+KKGD+SNCNNYRGISLLSH+GKV +KI+T+RLS +CE N ILPEEQCGFRPGRSTVDMLFVVRRLQELGR++KIPLYMCFVDL KAYDSVDRE+LWKVLARAGIP ++I++IRQFHDGMRARVRMD+GELSDWF V QG+RQG VLS LLFNIFFA +EVV+ RFSED ++ R LV L EG+
Sbjct: 24 ETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACKGVATAVETGNYAHLDGYVTELEEIYKDRDMRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGYDSIAAELLKIDD---DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVSIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSLLLFNIFFAEVLEVVVIRFSEDDVVRRSLVCLEEGK 424
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Match: A0A6H5JEX7_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX7_9PHAE) HSP 1 Score: 536 bits (1381), Expect = 3.660e-168 Identity = 276/427 (64.64%), Postives = 325/427 (76.11%), Query Frame = 3
Query: 1611 TAALLEAAQTELPMGRRIPRMQEWWQTPAATSAVDTALARRREARRLFKNNRDTSTWRALTAACKEVRTAVDEGIYAHLDRYVAELETLYTDRDMRGLYQHLKRSVGFSGKPSGGVQYVQDEDGVLLRNEGEILRRWVRHFASLLNRKSPNLIPSIVEEVEQRPAAPAA--LRAAPSREETRQAIWKMQNWKAPGDDSLPVELLKIDGTRTNEPIVLDYFHDIILRVWDGGGLPQEWKDAIIKVLHKKGDKSNCNNYRGISLLSHLGKVLLKIVTDRLSEYCEDNGILPEEQCGFRPGRSTVDMLFVVRRLQELGRQRKIPLYMCFVDLAKAYDSVDRELLWKVLARAGIPDEMIDLIRQFHDGMRARVRMDNGELSDWFDVIQGLRQG*VLSPLLFNIFFAAAIEVVLKRFSEDAIILRDLVRLSE 2885
T ALL AA+TEL R R EW T AA +A+ TAL +RR AR FK + +TWR L AACK V+ + +Y HL+ YV ELE +Y DRDMRGLYQHLKRS G SG+ +GG Q+V DE+GVLLRN+ IL+RW R F +LLN KSP L P +VE+V QRPA A L A P EE A + NWKA G D L ELLK+DG +EP+VL+ I + VW+GG +PQEWKDAIIKVL+KKGD+SNCNNYRGISLLSH+GKVL K +T+RLS +CE N ILPEEQCGFRPGRSTV MLFVVRRLQELGR+R+IPLYMCF+DL KAYDSVDRELLWKVLARAGIP EMI +IR+FH GMRARVR D+GELSDWF V QGLRQG +SPLLFN+FFAA +E+++ RFS+D +I+RDLV L E
Sbjct: 9 TEALLGAAETELSEELRRRRTPEWNMTAAARAALATALDKRRAARHGFKARPNAATWRILKAACKGVKATIATSVYDHLEGYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGD--DEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRSNCNNYRGISLLSHVGKVLAKTITNRLSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKE 433 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1485.1 >prot_P-fluviatile_contig12.1485.1 ID=prot_P-fluviatile_contig12.1485.1|Name=mRNA_P-fluviatile_contig12.1485.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=563bp MDANARTGKRIEGERIQEKVLGAYGRDELNDNGTLLLEFAIDNKFALMNTback to top mRNA from alignment at P-fluviatile_contig12:2272117..2276792+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1485.1 ID=mRNA_P-fluviatile_contig12.1485.1|Name=mRNA_P-fluviatile_contig12.1485.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4676bp|location=Sequence derived from alignment at P-fluviatile_contig12:2272117..2276792+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2272117..2276792+ >mRNA_P-fluviatile_contig12.1485.1 ID=mRNA_P-fluviatile_contig12.1485.1|Name=mRNA_P-fluviatile_contig12.1485.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3378bp|location=Sequence derived from alignment at P-fluviatile_contig12:2272117..2276792+ (Porterinema fluviatile SAG_2381)back to top |