mRNA_P-fluviatile_contig12.1455.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1455.1
Unique NamemRNA_P-fluviatile_contig12.1455.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig12.1455.1 vs. uniprot
Match: A0A6H5L7W1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W1_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 3.230e-128
Identity = 227/405 (56.05%), Postives = 278/405 (68.64%), Query Frame = 2 
Query:  470 APTLLSLSLLLLGVPSHLRGAHGFGYGEPIDVVVTAGDSLALAFEGPLAAAAAVSFQQCAGDVFLEMDVLFNGTSVSTPTST-TSKCVRLRGSSALLDDPAVLHDNLCVFQNSGPVGQGYLEEDQPLAGQFVDPNLVTAEFVNTGSVTASAQVVMFSTEFPAPSADQAIDRVVATTFREGNIFTVEAQFQADGAEDQNFCSGSNGCSIAAYYLEVNN-AADADRVFGTVCQARDGVKLYEGFTGPG-STFND-------------DNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRALSTTSFDLTACVEFPKLTAGRYRMFIVVSPDTASFAQVGYGVQDQLMYASGIIEIPAN-ADLTCPDPSAADTPTSGALAAVYALTPVRASGAMAAGLAAAAASRRA 1633
            A + ++L L LL        A GF YG+PIDVVVTAGD+LA++FEG LA A AVSFQQC+GDV+++MDV FNGTS+ T T+  TSKCVR+ G SA  DD A+ +DNLC F+NSGPVGQGYLEE   L+   VDP  +TA+F NTG++TASAQVVMFSTE+PAP+AD+AIDRVVA   +EGNIFTV+A+FQADG ED+NFC+G +GCS+AAYY+E++  + DADR+FGT CQA +GV LYEGFTG G STF+D             D                              SRALSTTSFD+TACVEFPK T   YRM+IVVSPDT S+ + G+GVQDQLMYAS  I +  + +D  CP+    +   SGA   V  LT  RAS A+AAGLA A A+ RA
Sbjct:   56 ASSAVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFRNSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGTITASAQVVMFSTEYPAPNADEAIDRVVAEYEQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQASNGVLLYEGFTGVGDSTFSDTEVIDDDEETTATDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDVTACVEFPKNTGAVYRMYIVVSPDTDSYTRTGFGVQDQLMYASDQITVEEDDSDYECPE-VVDEEAGSGARPRVV-LTASRASTAVAAGLAVATAAARA 458
[Close]
BLAST of mRNA_P-fluviatile_contig12.1455.1 vs. uniprot
Match: D8LQ00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ00_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 1.170e-116
Identity = 207/364 (56.87%), Postives = 252/364 (69.23%), Query Frame = 2 
Query:  593 LAFEGPLAAAAAVSFQQCAGDVFLEMDVLFNGTSVSTPTST-TSKCVRLRGSSALLDDPAVLHDNLCVFQNSGPVGQGYLEEDQPLAGQFVDPNLVTAEFVNTGSVTASAQVVMFSTEFPAPSADQAIDRVVATTFREGNIFTVEAQFQADGAEDQNFCSGSNGCSIAAYYLEVNNAAD-ADRVFGTVCQARDGVKLYEGFTGPG-STFND-------------DNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRALSTTSFDLTACVEFPKLTAGRYRMFIVVSPDTASFAQVGYGVQDQLMYASGIIEIPAN-ADLTCPDPSAADTPTSGALAAVYALTPVRASGAMAAGLAAAAASRRA 1633
            ++FEG LA A AVSFQQC+GDV+++MDV FNGTS+ T T+  TSKCVR+ G SA  DD A+ +DNLC FQNSGPVGQGYLEE   L+   VDP  +TA+F NTG+VTASAQVVMFSTE+PAP++D+AIDRVVA   +EGNIFTV+A+FQADG ED+NFC+G NGCS+AAYY+E++  +D ADR+FGT CQA +GV LYEGFTG G STF+D             D                              SRALSTTSFD++ACVEFPK T   YRM+IVVSPDT S+ + GYG+QDQLMYAS  I +  + +D  CP+    +   SGA   V  LT  RAS A+AAGLA AAA+ RA
Sbjct:    1 MSFEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTESDDADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDDGETTATDEVGVTDDEIAETTTDDTEAVLNGAGGARTRSRALSTTSFDVSACVEFPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQITVEEDDSDYECPE-VVEEEEGSGARPRVV-LTASRASTAVAAGLAVAAAAARA 362
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7W1_9PHAE3.230e-12856.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ00_ECTSI1.170e-11656.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1919469..1930396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-15_001480.1
Exons8
Model size1704
Cds size1356
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1455.1prot_P-fluviatile_contig12.1455.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 1919522..1930101 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815514.2682612-UTR-P-fluviatile_contig12:1919468..19195211622815514.2682612-UTR-P-fluviatile_contig12:1919468..1919521Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1919469..1919521 -
1693562103.9036825-UTR-P-fluviatile_contig12:1919468..19195211693562103.9036825-UTR-P-fluviatile_contig12:1919468..1919521Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1919469..1919521 -
1622815514.4182332-UTR-P-fluviatile_contig12:1930101..19303961622815514.4182332-UTR-P-fluviatile_contig12:1930101..1930396Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1930102..1930396 -
1693562103.9773061-UTR-P-fluviatile_contig12:1930101..19303961693562103.9773061-UTR-P-fluviatile_contig12:1930101..1930396Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1930102..1930396 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815514.3112543-CDS-P-fluviatile_contig12:1919521..19197191622815514.3112543-CDS-P-fluviatile_contig12:1919521..1919719Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1919522..1919719 -
1693562103.914059-CDS-P-fluviatile_contig12:1919521..19197191693562103.914059-CDS-P-fluviatile_contig12:1919521..1919719Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1919522..1919719 -
1622815514.3257987-CDS-P-fluviatile_contig12:1920083..19201671622815514.3257987-CDS-P-fluviatile_contig12:1920083..1920167Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1920084..1920167 -
1693562103.9248157-CDS-P-fluviatile_contig12:1920083..19201671693562103.9248157-CDS-P-fluviatile_contig12:1920083..1920167Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1920084..1920167 -
1622815514.3402448-CDS-P-fluviatile_contig12:1921981..19221341622815514.3402448-CDS-P-fluviatile_contig12:1921981..1922134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1921982..1922134 -
1693562103.9324725-CDS-P-fluviatile_contig12:1921981..19221341693562103.9324725-CDS-P-fluviatile_contig12:1921981..1922134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1921982..1922134 -
1622815514.3523118-CDS-P-fluviatile_contig12:1923250..19234491622815514.3523118-CDS-P-fluviatile_contig12:1923250..1923449Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1923251..1923449 -
1693562103.9402566-CDS-P-fluviatile_contig12:1923250..19234491693562103.9402566-CDS-P-fluviatile_contig12:1923250..1923449Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1923251..1923449 -
1622815514.362157-CDS-P-fluviatile_contig12:1924110..19242281622815514.362157-CDS-P-fluviatile_contig12:1924110..1924228Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1924111..1924228 -
1693562103.9481368-CDS-P-fluviatile_contig12:1924110..19242281693562103.9481368-CDS-P-fluviatile_contig12:1924110..1924228Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1924111..1924228 -
1622815514.3730345-CDS-P-fluviatile_contig12:1925002..19253391622815514.3730345-CDS-P-fluviatile_contig12:1925002..1925339Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1925003..1925339 -
1693562103.9555871-CDS-P-fluviatile_contig12:1925002..19253391693562103.9555871-CDS-P-fluviatile_contig12:1925002..1925339Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1925003..1925339 -
1622815514.3858902-CDS-P-fluviatile_contig12:1926540..19267691622815514.3858902-CDS-P-fluviatile_contig12:1926540..1926769Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1926541..1926769 -
1693562103.9627917-CDS-P-fluviatile_contig12:1926540..19267691693562103.9627917-CDS-P-fluviatile_contig12:1926540..1926769Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1926541..1926769 -
1622815514.3985507-CDS-P-fluviatile_contig12:1930063..19301011622815514.3985507-CDS-P-fluviatile_contig12:1930063..1930101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1930064..1930101 -
1693562103.9700902-CDS-P-fluviatile_contig12:1930063..19301011693562103.9700902-CDS-P-fluviatile_contig12:1930063..1930101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1930064..1930101 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1455.1

>prot_P-fluviatile_contig12.1455.1 ID=prot_P-fluviatile_contig12.1455.1|Name=mRNA_P-fluviatile_contig12.1455.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=452bp
MARSAGNDGQSRSWAQPGRGNCRSCLSSSSCSCSSSPSSSCSSTSGGSRA
AGRRPSLAAPTLLSLSLLLLGVPSHLRGAHGFGYGEPIDVVVTAGDSLAL
AFEGPLAAAAAVSFQQCAGDVFLEMDVLFNGTSVSTPTSTTSKCVRLRGS
SALLDDPAVLHDNLCVFQNSGPVGQGYLEEDQPLAGQFVDPNLVTAEFVN
TGSVTASAQVVMFSTEFPAPSADQAIDRVVATTFREGNIFTVEAQFQADG
AEDQNFCSGSNGCSIAAYYLEVNNAADADRVFGTVCQARDGVKLYEGFTG
PGSTFNDDNAATAAAGVDQTTTSAELDDDQQLPPAGGGSRALSTTSFDLT
ACVEFPKLTAGRYRMFIVVSPDTASFAQVGYGVQDQLMYASGIIEIPANA
DLTCPDPSAADTPTSGALAAVYALTPVRASGAMAAGLAAAAASRRAVVAG
F*
back to top

mRNA from alignment at P-fluviatile_contig12:1919469..1930396-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1455.1 ID=mRNA_P-fluviatile_contig12.1455.1|Name=mRNA_P-fluviatile_contig12.1455.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10928bp|location=Sequence derived from alignment at P-fluviatile_contig12:1919469..1930396- (Porterinema fluviatile SAG_2381)
ACAACCATGCTCAGAAGCCCTCTTCTACTTCCTTGCGGCAGCTAACAAAC
ATCGAGCTCCAGATCTCTCTCGGACACCACCCCTAGTCCCCAGCCAACTA
ATCTGGAATATCGTGCATCATCCACGGCTGCGCTGTTTTGAGGAGAACGA
CATACCTGGTGCGTCAAATCCTCCTTGTAGTCGGCGAGCGTGAGAGACAG
CATCGAGGGACAGCAACGAGAGACAGCAAAGGAGAGTGAAGGGGAGCGCA
ATAAACAAGTGCCTCGATCGCGTGGGAGAGGGACCAGACAAAGAAATGGC
AAGGAGTGCGGGAAACGACGGCCAAAGCCGCAGGTGAGAGACGCGACTCG
CGACTCCTTCGCACACCCGCTGTTGCACAACCTACGCTGGAGAGCATGCT
TTCGGTGTTCTCTTCGAGAGAGATGGACGATTTTCGATGTGGGGTCCTGC
AATCGCATGTTCCAACAATCAACACATCTTTGTGGCGAAAGGTATCCTTG
CAGCTTGTTCCTGAGCAATCAGTATCGCGACGAATCGGGAGATCTGTGTC
ATGAACGCTGCCTTCAGTGCGCCAGCACCTCCTAGAAAACTCAACCCCCA
GCAGGTGCGAGATTGTGTTTCGTTTCTGTTGCGCGAAAACATTAATCAAT
TTCAACAAAGCCCCCCGACACCGCGGGGTGTCGCGCGTGCGTTTCATGAG
GTTCTGGTCAGTGGCCCTTGACTCGCAGACGCGGGTGTGGAGGTGTGCTC
GGTGCGCCTTGTTCTGTGCGTGAATGCATCCGGCGCAAGTATCGGGCGCA
ATTCGGTGCTTTCAACTTCTAAACCGCAGCAGGCCGGCAACTACAAAGCG
GAGAACAGAGGAAAAGATAGCAGAGGCGGGAGAGGGATTTCGCTTAATGT
CTTCATCTGTAGGACGACTACGGCAATAGGTACATGCGAAGGGCCAAAAA
TGGCCGCTATCGGATCTTTCCCCCTTGGCCTGTCCCTTTCTGTTCTCTCC
CTCGTCCCTCCTTTTCTGGAACGTAGTCAGCCACCGAGTTCATTCAAGTG
AGTCCGAGCGAGAGGTAGCGAGAGCAGCAAGGCGTCTATAGTTCGAGATA
GGCTTGGCGAGGGAGATCTAACGATGTAAACACAGGCGTGCGAGCGCGGG
AGGGTCATGCGCGCGGACTCTTGTACAGATGTGTTGCAATCTGCTTTCAC
TGGGAATGGGAACCAACGAGGTCTCTCTCAGAAACGTGTACAGGAAACCT
AGACTACGAATGGAAACTTTACTTACCTGTGGTATGCCCCGTGGATCAGA
GAGATTGCAGAAGTCACGCCGCCGTCTGTGGTTGAACATTACGAATCCCG
CTGAAGCGACTCCCGGTTTAGCGTCTTGCCCTGTGCTAAGCGTTGGTGCC
CCCTAGACCACGAGACACCGCTACATGCCGGCTGTATTAACGCTTACAAA
AACTCAGCGACCGGCCCTGGGGACAGGCGACCACGTTTCGTTTTGACACG
GTCGTTCAACCGGAACCTCTGCAGCTGTGCTGCGAACATGAGTATCCGCC
CCGCTGATGGATAAAAGTCTCAATCCATTGGACCATGCAGTAAGCTGTCA
GCGCTGACTCAGTGTTCTAATGGATAAGATAAGCCTTCATCTTTCAAAAG
ATACGTCTACCTGGTCAGCGCTGAGTAAGTGGCCTTTGTTCATCACCCGT
AGCCGACAGGCAGCGAGCGACAAAGTGGAACATACCCCACTTTCTCAAGT
CCCCTCTCACTCCTCTCTGCCACTCTCTGCCGGCCGGCCGCCCCGCTGGC
ATCCGCCGATCTAGCCATCGCCGCTCGGGCCCGGTCGGACCTTTGTCTGC
TAGCATGCACATAATAGGTTGTGTGCGTACAGCTACGCCGAGAGGACACC
AAAATCAAGGAAACTCCCCACCGCGACCACCTTTTTTGAAGCAGGGGGTC
ACGATGGTCCGTCCCCTCTACTGAACTTGAAGGACTCTTGCTTCATCGCG
TGGCGGACACTCGAAATGTCCTTTCAGCTGGGTCGACTGTAAGAAACGAC
CTTTCTTGTCTCGCCCACGCTCTCTCTCTCTCGCTCTCACACACACCGCC
TGATGTTTTTTCAGTCACAGAACATCGTCTGACGCACAAACAAGTAAACT
GCAAACCATGTGCCGAAGACCATCGAACGAGCACACACGCACGTTCCGGT
GGGCTGGCGCGCTTGTGAAAGACGTTGGATGGGAGGTCACACTAGGTTGT
GTTTATCCAAAGTTTCATGACGCAGGGAAGTGTCCGTGGGTGTGTCAGCG
GAAGAGACGACTCGGTAGCCCCCTGCCAAAGAAAAATGAGTGTCCGTTAA
TCGACGGTTAATGTTCATTTTGGTGTCCTCAAAAGCGGGGACGGCTTGAT
TCACGTCGCCGCGGTGTCTAGGGTGTAGCTGTCTCGTAAAGCAACGGAAG
AGAGACAAAACCAAACAAAATGAGAAACAGGGCAAACGAAAGGCATACCG
AATTTCCGATTTTTGGAACAAATGCGCGCCATGTTTCGAGTGCGCGAGTA
GATGTGCCGAGTATGAGCAGATACGAGGGAGAATGACTGCAGCCGACTGG
CAAGCAATTCCAATGCTTTCGTGATCGAGCCAGCCGGGCAATCTAAGCCC
GAAACCCCCCCAAGCGAGATCAACGAAGACAACAAGAAAGGAGAACACCA
GACGCGACGCATCTTGCGTTGGTAGATGCGTCAAAACGCGCGAATCGGGG
CGACTCCCTCCGTATATAGCGTATGGTTTCGACCGAGAATGTAGGTTTGA
TCGAGAATGTAGGGAGTGGTTTGTTGGGTTCTCTCAATAAAAATGCACGT
ACCCTCGGTAATGTTATTTTGGGGTGTCAAATTGTCTCGCCAAAGACCAA
AATTATTAAAGGCAAACAAACAAGAAAACAAGCGACCATTAAATTGATTA
CAAGCCATCCCTGTGATGCTGATACCCATTAAAACTACGTGGGTCGACAG
TAGTGGAGTGTCGAAAAAAGGGTGGCACGCCGTGGACTGAGCTCGAAAAC
ACCAAGTCCTTGTCGGGAGGGGAGCCTGAACCTTCCGTCTCGGCTTGGAC
TTTCTTCGCCTCCGGCATCCTAGTGTCGGGGGCGATCAGGGCGTTGCATT
CTCCTCTCATTCCCGGCGCATCCTCGCTGTGCCGAAGTGAGAGCACCGTT
GCTGCTGTCGTGGTTGTTTTCATTATCGTCCTATAAAAAAATCATCCCCG
GTCACCTCTCGTTCGGTAGCCCCAAATGTCCGTGTTGGCCTCTTCTACCC
GGGTACGCTTTCGGGGTCACAGGCTCTTAAACAGCCCATACAGGTTGCAA
GCGAAAGAGTTGAATGCAGAGAGAATCAGGGCGGAGGCACGATTCTACCC
CCAGATGAGGCGAACACACACCTTGCTCCAAAATCCCATCAACCGCACAT
AGGGTCGACATGTGAATTTCACCACCATTTTCACAATGTCAAGCTGATAT
TTGCTTTTGTTTTCTCTCAAGACGTTGGCCCTCCCCTCTTTTGCTGTTCC
CACCCCCGCCGCCGCCGCCGCCGCCGCCTCTCCCCTGCCCGTCCTCCCGC
GTCCACGGGGCGCCCCCGCCTTCGCAGCTGGGCACAACCCGGGCGAGGCA
ACTGTCGGTCTTGCTTATCCTCAAGTTCTTGTTCTTGTTCTTCGTCGCCT
TCGTCTTCTTGCTCTTCCACAAGCGGCGGTAGCCGTGCTGCCGGCCGCCG
CCCGTCGTTAGCGGCGCCGACCTTGTTGTCCCTCTCCCTTCTGCTGCTGG
GGGTGCCGTCGCACCTGAGAGGCGCCCACGGCTTCGGGTACGGAGAACCC
ATCGATGTGAGAGGGGGGAGGAAGGGGGTGGGAGAGTAAGTGGCGGGGGC
GGGAGATGCACGAATCGAAGGCGAGAGACAAAACAAACTGGGATAATTAT
CAGCGGAGTAAGGTGAAAAACAGGCACAACGTAAGCAGGACACACCCGCA
TATACACCACCGCGACACCGCCCCATTCCGGCTGCTGCACGGCCCCACGG
AGCACCCATGGTACGCAAAGCCCCTGCTGCCTGCTCGAATGTGTGCGCGC
AAGAGAGATAGAGCGAGGGAGAGAGGATGGGAGGAAGTGTTGCGTTTTTT
TTAAGTTCATCGTGATCGGAGGGCCCGAGCGAGGCACTGTTTTTTGTAGC
GCATTCTCCCAACCCGATCTCGATGTCGAGCGAAGGGAGCAATATGAAAC
ACAGCAAAACAATCCCATCCCGTCCAACCTTTCATTTTTTCCCCTATCTT
TCGCGTCATCGGAAATGATGGATTGGATTGTCTCGTTCCCACATGGAAAG
ACTGTGTGTGTTTTCGTCACTTTATTGGCGACAGTCCCTCCGATCAAGGC
GAGACGTGTAACACACTTTGCAGCGTTTTTGGAGGACTACACTTGTTCAG
TGTATTTTTCTGTCCAACTAGAACCAACCGTGGTCACACAGGAGGGGGTA
AACACCGGGACTTTTTTCTTCTTTTTCTTTTTCTTTTTGTGCCCCACCTT
CCTCCTGCGGTGGTAAAGACTGCGAGGGTATGTTGTTTTGGGCCTGCCAA
AAAAACAAGAGAAGGAAACCTGTCGGCCACCGCGGGGGGGGGTTGGACGC
GCTCAGCCTTCCGGGGGCTGACCTTGCCGGTGACCGTGTCGTTCCAGCAG
TGCATTGAGGAATCGTCGAGTTATACCCCGTCGGAACGATCGATGACTTG
ACTTCACTATGCTTACAACAAAAGCATTGTCGTGACCGCGGGCGGGGGAC
TCTCCCTAGCCTTCGGTGGCCGCGGCGGCGGGCCGCGATCCTTCCAGCAG
CTGCAGTGTACCGCAAAGCCCCTTCTTTTCCCTTCAAGTGACGACCTGAC
TTCAGCGTTGTTTCAGAACACCCCGTGCCACCTTTCCAACCGTGGCTAGC
AGCTGATTGATCGCGTGAACTGTGAATGTGAAATACCAAATCGATGACTG
CGAAATACCAAATCTATACCTTTTGCTGTCGCTACCCCCCTCCGAAAAAT
CAAAAAGGTTGTCGTGACAGCGGGGGACTCCCTTGCCCTCGCCTTCGAGG
GACCGCTGGCGGCGGCGGCGGCCGTGTCCTTCCAGCAGTGCGCGGGCGAC
GTCTTCCTGGAGATGGACGTTCTCTTCAACGGCACGTCAGTCTCGACGCC
CACCTCGACCACGAGTAAGTGCGTCCGGCTCCGAGGCAGCTCGGCGCTGC
TGGACGACCCGGCCGTGCTGCACGACAACCTCTGCGTGTTCCAGAACTCG
GGCCCAGTGGGGCAAGGGTACCTCGAGGAGGACCAGCCGCTGGCCGGGCA
GTTCGTCGACCCGAATTTAGTCACAGCCGAGTTCGTTAACACTGGTGAGT
GAGATAGAGAGAGCGTGGTTTTTCCGTGATGTCGATGTGTTCGCTTTTAC
TCGGAGTGGTGTCATTGACAAGTGTGTGATTAGACAACCTCTGCGTGCTC
CGCACTTGGGGGGGGGGGCGAGCCGCGGGGTTTCCTCGAGGAGGATCAGC
CGCTGGCCGGGCAGCTTGTCGACCCAGCCTTTGTCATTGCCTAATTCGTG
AACACGGGTGAGAGGAGTAATGTGTATTGCTATTGTTATATTTTCATTCA
AATATTGTTGAGAGTGTAGGTGTTCTATTATTTTCGTCACATTGCTTTGC
TCGATGGGGGAGTTCGTCGATCCGTACTTTGTCACGGAAGATTTCATGAA
CGCGAGCGAGGGGAGGGTGGTTCGAGGGGAGCAGGGAGGTTCAGGGGGGC
AGGAGTAGCGAGGGGGGAAGGGGCAGAGGGGGGATCAGGGAGGGAGGAGG
AGAGAAAGAGATTGAGACAGAAGAAGTGACGGTGCGAGACAGTGCGAGAC
AGTGCAGCCCCGAGAAGTGTCGAACAATCCCTACCAAGGGGTATGCTTTT
CTACCCATGGTGAGAGAGAACGTGTGAGCGCATCTGGGCAACGTTTGGCT
TTTTGTGCCGAGAACACAAGAACAAATACGAACGAAATGAAATGCAAGTA
TAGAAAGCGTGTTTCTCTGTTCCTTCCTTCCGCTTCCGCGGTAGCGACTG
AGAGCGTCTATTTTTCTCTCCTCTTTTTGTTTTTTTCTTTGCCGCGTGCG
CCCTCCCTCCCGCTGCAGGATCCGTCACCGCCTCCGCGCAGGTCGTCATG
TTCAGCACCGAGTTCCCTGCCCCGAGCGCGGACCAGGCCATCGACCGCGT
CGTCGCGACTACTTTCCGGGAGGGGAACATTTTCACGTGATTTTTCCTTT
TTTCCGCACATGCGGCGCCCCCCTGACAAGAATTATGCTAGTAGAACGTG
TGACTCAAACGCTACTTTAGCAATGATCACACCAGCTCATCGTGATTTGG
AGAAATCGAGCCTGCGTTTGTTGTGTGACAGCGTTTCTTGTGAGCGGGTC
GGTACTGATGTGCATTGCTTAAACACGCAAGTGCTCAAACTTTCATTCGG
GACAAAAATGAAGCCAAGGCCGACAATACAAATATTGAAGATCCAGGCCG
ATTGGGGGACAAAGCAAATGATGACACCATGAAACGACCACACCAGGCCA
AGCAATTGAAACAACCCAACAACACACGAACGAGCGGGCGATGCATGATG
GCAAACCAACACAGGGGAGAGCGAACGAACCAACGTCGGACTTGCTCGGA
TCCGTTTTGTTTTGCCATCGGTCGCGTGCATGCGTGGAGGACAGGCTCGG
GTCCAGGCTGGCGGACGGTTGACCAAAACGTGACCAATCAAGAAACACCG
CGCCAGACAAATCGAACCAACGACCCAGCACACGAACGAACGAACGAATG
ATGTACACAACAAACCAACACACCGGACGACTTGCTTGGATTATTTCCTT
GAACGAAATCATCTGATCGCATGCGCTAAATTCATCCACCCACACAGGGT
CGAGGCTCAGTTCCAGGCCGATGGGGCGGAGGACCAAAACTTCTGCTCCG
GGTCAAACGGGTGCTCCATCGCCGCCTACTACCTTGAGGTCAACAACGCC
GCGGACGCGGACCGGGTGTTTGGCACCGTGTGCCAGGCCAGGGACGGCGT
CAAGCTCTACGAGGGGTTCACGGGCCCGGGCTCTACCTTCAATGACGTGC
GTTCTCTAGTGTGTGCTCGTGTGCGGGCGCGTGCGTGTGCTCGTGTGCTG
GTGTGTTTGCGTGCGTGCGCGTGTTGTTGATTTCTTTGGGCAGTGTGCGG
GGCAGATTATTTTCGTTGCAGCATCAGCGCGACCGCGTGCGTGTTGAGCT
TGCTTGTCGATATTTCTGATTTGAGCGTTATTGACCGTTACTACAGCATC
CACATGTGTTGTTGTTGTTGTTGTTGCTATTCTATTCCTCCACAGTAAAA
CCTTCCCGACCATCTCTAGTACCTTCAGGTGCCCGTAATCAATCCTACCG
AATCGATCACGCGGCCAAAGGCCGTGTGTCCCGGTGGATACGTACGTCGA
GAGGGAAGAGTTGTCAATATTTTCGATTAAAAATCGAGTGCAAGCCCCGC
TAGAGGGTGGGGCGGGGAGGGCTCAAGGAGAGCAAGAACGTTTCCGCGAG
ACCACGGATCAGGGGTCTGACGAGGCGCCCCTGTGAGCGATGGTTTAAGG
GGATGACAGAACAAAAGCCTCGCTGAGCATGGCGACCAGAGCCGCCGTAA
AAGCTTTCTCAAGCGAGTGCGTTTCTCCATTTCTCGCCGTTGTCGTGCTG
CGCTGTGTTCGCGTGTCGTTGATTTCGAGCGTTGACGTCGCAACTTTGAT
TTTTTCCACGCCCATTCTAAGCCCGTGGTAGTGGGCAGAAGAGTTCAGGC
TTCCCTGCCGAGAAAACGTGCATGTATACGGTGTGTTTACCTGCCTTTGC
CCCCATTCTTTCCCAGAAAGGAGGAGGAGGCAGAAGTCGCCAGATTGAGA
GGAAACATAAAAAACTGAATGATGATTCATCCCCATGATTGAATTCTGTT
GTGGTTCACATTGTGCCGTCGTATTTTTCGCGTTTTTGCTTCATGTTTTT
CATCTTTCGCTTTTTGTTTCATTTTTTCATTTTTCGCGTTTTTGTTTCAT
TTTTTTCATTTTTCGCGTTTTTGTTTCATTTCTATTCATTTTTCGCTTCT
TCTGCGACTCTCCTCCGCATTGAATTTTTGTTTTCGTCTCGGTAACTTCA
CGTTCATCTCATTCGCTGCTACCCCCCACCACCCCCCAACGGCCCGTTCC
CCGCTCCCACAGGACAATGCCGCGACGGCGGCAGCAGGCGTGGACCAGAC
GACGACGAGCGCGGAGTTGGACGACGACCAGCAGCTTCCGCCGGCGGGGG
GGGGGTCCAGGGCCCTGTCGACCACGTCGTTCGACCTCACGGCCTGCGTC
GAGTTCCCCAAGCTCGTGAGACAAAGAAGATAGGGGACGTATTGATCTTC
ACTCTGTTTTGGTTTTGTTTGTTTTGTTTTACGGATGTTGTTGCCTGTGT
CGTCATATCAAAACATGTCCGATTGTCTCCAATAACTTCGATTGTCCGTG
CTGTAACCTACCGACTCGATCGATGGCCGCGGGCAATAAAAGTACCCCAA
AGGATGTTTACATAGGGACAATGGATAAAACTGGGTGTACGAACCCCCTT
TTCGGACAAAACCAGGTGCTCGGAAAACACATATGAGGCAAGCGCACCCG
CACGCAGCCCAAACGGGTCAAAACGTGATTCCGGCGCTCGTGCAGCGTGC
CCGTGCCCATTGCGGAGCATTACACAAGCTTTTGGCAGCTTTTGCGAGCC
CTGCTGGGCTTGACAGCACCGCGCTGGCCGCGGCGTCCGGCGCGCACCCA
GTTTTGTCTAGAGCTTCGGTACACCCACCGGCTGCTGCTCATTTTGTCGT
GCACCCAGTTTTGTCTAGAGCTTCGGTACACCCACCGGCTGCTGCTCATT
TTGTCGTGCACCCAGTTTTGTCTGCTGTACTACCCAGAATTGTGTCTCCA
CTGTTGTCCACTTTCGATCAACCAAAAGCTGCCTACCTCCCCCAAGCCCC
ATGGTTGAAAGAGAGCCTACGGACGCAAGTACACCAACGGACCAAGGTTG
TAGGTTACCCTCCCTCTCTTTCTTCTCATACTCTCCTGAGCACTTCCACG
CGATGCGCTACCCCTGCCACTATTTATAAAACAGAGCTCTTGAGACGTTG
TTGCTGTTATCGACCGCGGTAGGCCGAATACTGAGTGACGTAGGCATTGC
AGCGCTCACTCTTAAAACGGCACCCTGAACGCCAACACCGAGGGTGTATT
GCCCCTACGTGACTCGTGGCGGGGGCAGCGAATGCACCGTGATGAAGTGC
GCGGGCTGGAGAGTGCGTGAAGAACGAGAGATCGGGTAGGGTAACCTATG
ACCTTGACCCGTAGGTGTGTGTGTCCGTTGGCTCTCTCTCAGCCACGGGG
TTTGTGTGTGTGGAGAGCTCAAGGAGCCCGATTGGCGGTATCTTTCGATG
TGAAGGTGCGATTGGCTGTATCTTTCGACGTGAAGGTGCGAATGGGGCGT
TCGGGGCAATTCGATCCCAGTCGGTTTCCGTGGATGTCCGGCGACGAGGA
TTAGAGCTTCAAAATACTGCTCCCTCCACCCTTCGAAGATGTGCAAATGG
GCGTGCGAGGTAACTACAGAATGAAGAGGTGGCACGTGAAGTTGCCTGCT
CTTCCCGAGCTCCGGAGGCCCCGCGGGGCGGCAAGTCGTGAACGTGATAT
GAAACGCTACTAACGGCTTTTCGCAACGTAAAACGCAACAAATAATATAG
TACAACAAATAATATAGTACCAGAGTTGTATGAGAAACAAAGCAAACAAT
ACCTTTGATTGTTTTAACGAGCAACGCACCACATTTGCTTTTGTGCAAGA
TGAACAGCGCGCATATCGTGCCGCAATCAACATTTTTGCTAATTGGAACG
TGAACTGCGACCCTACGTTTACCCGAGCGTACCCGCGCTTGCTCAACGCT
CCCGCGCTCTATCTACCACGTTAGGCCACGAACCCATGTGTACCCGCATT
TCCTCATGTTATTACAAACCCCACGTACGTCGCATGTACCCGCGATCCCC
CGAATGTAATCGCGAACCCACGTGCGTACCCAATCACACGCACCACGCTC
GCACTCTACCGCATGGTATCACGAACTCACGGACTTCCCCACGCATCCGC
GCTGTTTCCCCCGTCCCGTCATACGTCAGACGGCGGGAAGGTACCGGATG
TTCATTGTGGTGTCCCCCGACACCGCGAGTTTCGCGCAAGTCGGCTACGG
AGTGCAGGATCAGGTACAAGGAAGGCTTTATTCCCCCCTCTTTGTGCAGA
TGGAGTGCAGGATCTTGGATGTGCAATTTCAGTTAGGTACAGCAGTAGGG
TTCCCGATGAGGCGGTGCCCTGGGGTGCCCCGAGTAGCGCATTTGCCGAT
GCGCTGGTCCGATATTGCAGAGGGTGAGATCGCCTGGCATCAGTACTCAG
CAGAAGATGAGGAATTCATTCAGGGCTCGTCTCCAAAGTACTGGTTATCC
CGCCTGGGGCCGAACACGGATATGCGTGACTCGAGTATGCCCCCCCCCCT
TTCTTAATCATCCCTTCCCCTGACCCCCCTCCCTCACTAACTGTCGTCAA
TTATCGCACGCACTCCATCATATCCAGCTCATGTACGCGAGCGGGATCAT
CGAGATCCCGGCGAACGCGGACCTGACCTGCCCGGACCCCTCGGCGGCCG
ACACCCCGACGTCTGGGGCGTTGGCGGCTGTATACGCCCTCACCCCGGTG
CGGGCTTCCGGCGCCATGGCCGCGGGGCTCGCGGCGGCGGCGGCGTCAAG
AAGGGCCGTGGTGGCAGGCTTCTGAACCTTACTGCGTTCTTCGCTGCCCG
AGTGTGGCGTAGTGGCCGACAACGGTGC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig12:1919469..1930396-

>mRNA_P-fluviatile_contig12.1455.1 ID=mRNA_P-fluviatile_contig12.1455.1|Name=mRNA_P-fluviatile_contig12.1455.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2712bp|location=Sequence derived from alignment at P-fluviatile_contig12:1919469..1930396- (Porterinema fluviatile SAG_2381)
ATGGCAAGGAGTGCGGGAAACGACGGCCAAAGCCGCAGATGGCAAGGAGT
GCGGGAAACGACGGCCAAAGCCGCAGCTGGGCACAACCCGGGCGAGGCAA
CTGTCGGTCTTGCTTATCCTCAAGTTCTTGTTCTTGTTCTTCGTCGCCTT
CGTCTTCTTGCTCTTCCACAAGCGGCGGTAGCCGTGCTGCCGGCCGCCGC
CCGTCGTTAGCGGCGCCGACCTTGTTGTCCCTCTCCCTTCTGCTGCTGGG
GGTGCCGTCGCACCTGAGAGGCGCCCACGGCTTCGGGTACGGAGAACCCA
TCGATCTGGGCACAACCCGGGCGAGGCAACTGTCGGTCTTGCTTATCCTC
AAGTTCTTGTTCTTGTTCTTCGTCGCCTTCGTCTTCTTGCTCTTCCACAA
GCGGCGGTAGCCGTGCTGCCGGCCGCCGCCCGTCGTTAGCGGCGCCGACC
TTGTTGTCCCTCTCCCTTCTGCTGCTGGGGGTGCCGTCGCACCTGAGAGG
CGCCCACGGCTTCGGGTACGGAGAACCCATCGATGTTGTCGTGACAGCGG
GGGACTCCCTTGCCCTCGCCTTCGAGGGACCGCTGGCGGCGGCGGCGGCC
GTGTCCTTCCAGCAGTGCGCGGGCGACGTCTTCCTGGAGATGGACGTTCT
CTTCAACGGCACGTCAGTCTCGACGCCCACCTCGACCACGAGTAAGTGCG
TCCGGCTCCGAGGCAGCTCGGCGCTGCTGGACGACCCGGCCGTGCTGCAC
GACAACCTCTGCGTGTTCCAGAACTCGGGCCCAGTGGGGCAAGGGTACCT
CGAGGAGGACCAGCCGCTGGCCGGGCAGTTCGTCGACCCGAATTTAGTCA
CAGCCGAGTTCGTTAACACTGGTTGTCGTGACAGCGGGGGACTCCCTTGC
CCTCGCCTTCGAGGGACCGCTGGCGGCGGCGGCGGCCGTGTCCTTCCAGC
AGTGCGCGGGCGACGTCTTCCTGGAGATGGACGTTCTCTTCAACGGCACG
TCAGTCTCGACGCCCACCTCGACCACGAGTAAGTGCGTCCGGCTCCGAGG
CAGCTCGGCGCTGCTGGACGACCCGGCCGTGCTGCACGACAACCTCTGCG
TGTTCCAGAACTCGGGCCCAGTGGGGCAAGGGTACCTCGAGGAGGACCAG
CCGCTGGCCGGGCAGTTCGTCGACCCGAATTTAGTCACAGCCGAGTTCGT
TAACACTGGATCCGTCACCGCCTCCGCGCAGGTCGTCATGTTCAGCACCG
AGTTCCCTGCCCCGAGCGCGGACCAGGCCATCGACCGCGTCGTCGCGACT
ACTTTCCGGGAGGGGAACATTTTCACGATCCGTCACCGCCTCCGCGCAGG
TCGTCATGTTCAGCACCGAGTTCCCTGCCCCGAGCGCGGACCAGGCCATC
GACCGCGTCGTCGCGACTACTTTCCGGGAGGGGAACATTTTCACGGTCGA
GGCTCAGTTCCAGGCCGATGGGGCGGAGGACCAAAACTTCTGCTCCGGGT
CAAACGGGTGCTCCATCGCCGCCTACTACCTTGAGGTCAACAACGCCGCG
GACGCGGACCGGGTGTTTGGCACCGTGTGCCAGGCCAGGGACGGCGTCAA
GCTCTACGAGGGGTTCACGGGCCCGGGCTCTACCTTCAATGACGGTCGAG
GCTCAGTTCCAGGCCGATGGGGCGGAGGACCAAAACTTCTGCTCCGGGTC
AAACGGGTGCTCCATCGCCGCCTACTACCTTGAGGTCAACAACGCCGCGG
ACGCGGACCGGGTGTTTGGCACCGTGTGCCAGGCCAGGGACGGCGTCAAG
CTCTACGAGGGGTTCACGGGCCCGGGCTCTACCTTCAATGACGACAATGC
CGCGACGGCGGCAGCAGGCGTGGACCAGACGACGACGAGCGCGGAGTTGG
ACGACGACCAGCAGCTTCCGCCGGCGGGGGGGGGGTCCAGGGCCCTGTCG
ACCACGTCGTTCGACCTCACGGCCTGCGTCGAGTTCCCCAAGCTCGACAA
TGCCGCGACGGCGGCAGCAGGCGTGGACCAGACGACGACGAGCGCGGAGT
TGGACGACGACCAGCAGCTTCCGCCGGCGGGGGGGGGGTCCAGGGCCCTG
TCGACCACGTCGTTCGACCTCACGGCCTGCGTCGAGTTCCCCAAGCTCAC
GGCGGGAAGGTACCGGATGTTCATTGTGGTGTCCCCCGACACCGCGAGTT
TCGCGCAAGTCGGCTACGGAGTGCAGGATCAGACGGCGGGAAGGTACCGG
ATGTTCATTGTGGTGTCCCCCGACACCGCGAGTTTCGCGCAAGTCGGCTA
CGGAGTGCAGGATCAGCTCATGTACGCGAGCGGGATCATCGAGATCCCGG
CGAACGCGGACCTGACCTGCCCGGACCCCTCGGCGGCCGACACCCCGACG
TCTGGGGCGTTGGCGGCTGTATACGCCCTCACCCCGGTGCGGGCTTCCGG
CGCCATGGCCGCGGGGCTCGCGGCGGCGGCGGCGTCAAGAAGGGCCGTGG
TGGCAGGCTTCTGACTCATGTACGCGAGCGGGATCATCGAGATCCCGGCG
AACGCGGACCTGACCTGCCCGGACCCCTCGGCGGCCGACACCCCGACGTC
TGGGGCGTTGGCGGCTGTATACGCCCTCACCCCGGTGCGGGCTTCCGGCG
CCATGGCCGCGGGGCTCGCGGCGGCGGCGGCGTCAAGAAGGGCCGTGGTG
GCAGGCTTCTGA
back to top