mRNA_P-fluviatile_contig12.1450.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1450.1
Unique NamemRNA_P-fluviatile_contig12.1450.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: D8LPY9_ECTSI (Choline-phosphate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY9_ECTSI)

HSP 1 Score: 566 bits (1458), Expect = 6.960e-200
Identity = 285/325 (87.69%), Postives = 300/325 (92.31%), Query Frame = 1
Query:  121 KKSKPQKSPPPLPARVELSFLPGGFKPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLARTSFC 1095
            KKSK +K+ PPLPARV+++FLP GF+PDL KLV G+PGT +GRP+RLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCND+LTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVV++DFIA HQIDFVCHDALPYGDASGQSSSGDVYAHLKR+GRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIV+DKVTRRVGKVIKDRQ K  +QQAG AL  KG KGR G    G      KERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLARTSFC
Sbjct:   42 KKSKAKKNVPPLPARVDMAFLPNGFRPDLTKLVAGAPGTSTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDKLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVDEDFIAVHQIDFVCHDALPYGDASGQSSSGDVYAHLKRQGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVKDKVTRRVGKVIKDRQKKKTKQQAGGALITKGVKGR-GXXXXGVDPNGNKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLARTSFC 365          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: A0A835Z3L7_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L7_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 1.520e-131
Identity = 196/313 (62.62%), Postives = 226/313 (72.20%), Query Frame = 1
Query:  157 PARVELSFLPGGFKPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLARTSFC 1095
            P     S+LPGGF PDL+KL EG PGT +GRP+RLYADGIFDLFHYGHAKALEQAKR+FPN YLLVGCC+D LTH LKGRTVLKDTERYESL+HCKWVDEVVEDAPWVV D+F+ AH IDFVCHDALPYGDASG S  GDVYAHLKR GRFVET+RTEGISTSDIITSIIQDYD FVRRN+ RGY+A+DMNV FLKEQAIKF +V+++V   +GK+IK+                                              + AQ    D+Q+ FV +F+RD A RT +R QR++IR R+ VLA+ S C
Sbjct:  110 PVETLCSYLPGGFFPDLSKLKEGEPGTLTGRPMRLYADGIFDLFHYGHAKALEQAKRAFPNVYLLVGCCSDALTHRLKGRTVLKDTERYESLRHCKWVDEVVEDAPWVVTDEFLCAHSIDFVCHDALPYGDASGVSDDGDVYAHLKRAGRFVETRRTEGISTSDIITSIIQDYDEFVRRNLRRGYSAKDMNVSFLKEQAIKFGMVKERVAENIGKLIKE---------------------------------------------NSQAQALAEDLQKAFVSVFNRDSAFRTRWRNQRKEIRNRIGVLAKNSLC 377          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: A0A8J5MIM5_9STRA (CTP_transf_like domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MIM5_9STRA)

HSP 1 Score: 318 bits (816), Expect = 2.350e-103
Identity = 156/304 (51.32%), Postives = 207/304 (68.09%), Query Frame = 1
Query:  196 KPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV----LARTSFC 1095
            +P   KL EG PGT +GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN+YLLVGCC+D +TH+LKGRTV+ D ERYESL+HCKWVDEVVEDAPWV+ D+F+  HQID+VCHDALPY DASG++S GDVYA +K  G+F+ET+RT+GISTSD+I  II +YD F+RRN++RGY+ +DMNVPF+KE++IKFD+  DKV   V   +    NK +                                                +MQ NF+++F ++G +RTSFR++R+ I+ER++     +AR   C
Sbjct:   55 EPYRKKLKEGEPGTPTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDDITHKLKGRTVMTDQERYESLRHCKWVDEVVEDAPWVLSDEFLEKHQIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKAD------------------------------------------------EMQHNFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 310          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: A0A8K1FT60_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT60_PYTOL)

HSP 1 Score: 318 bits (814), Expect = 5.630e-102
Identity = 159/307 (51.79%), Postives = 208/307 (67.75%), Query Frame = 1
Query:  187 GGFKPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV----LARTSFC 1095
            G ++P   +L +G PGT +GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN YLLVGCC+D LTH+LKGRTV+ D ERYESL+HCKWVDEVVEDAPWV+ D+FI  HQID+VCHDALPY D+SG+SS GDVYA +K  G+F+ET+RT+GISTSD+I  II +YD F+RRN++RGY  +DMNVPF+KEQ+IKFD+  DKV   V                                             +LV  +   A+    DMQ +F+ +F ++G +RTSFR++R+ I+ER++     +AR   C
Sbjct:  128 GEYQPFRKELKDGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVYLLVGCCSDELTHKLKGRTVMTDKERYESLRHCKWVDEVVEDAPWVLTDEFIEKHQIDYVCHDALPYSDSSGESSDGDVYARIKMMGKFLETKRTDGISTSDLIIRIIAEYDTFIRRNLQRGYTGKDMNVPFMKEQSIKFDMAVDKVKHDVD--------------------------------------------SLVHKVLGKAE----DMQHSFLDLFSKEGRLRTSFRKRRKIIKERLSERLSDMAREGLC 386          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: V9ETF1_PHYPR (Choline-phosphate cytidylyltransferase n=6 Tax=Peronosporaceae TaxID=4777 RepID=V9ETF1_PHYPR)

HSP 1 Score: 314 bits (805), Expect = 1.110e-101
Identity = 154/304 (50.66%), Postives = 205/304 (67.43%), Query Frame = 1
Query:  196 KPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV----LARTSFC 1095
            +P   KL EG PGT +GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN+YLLVGCC+D +TH+LKG TV+ D ERYESL+HCKWVDEVVEDAPWV+ D+F+  H+ID+VCHDALPY DASG++S GDVYA +K  G+F+ET+RT+GISTSD+I  II +YD F+RRN+ RGY+ +DMNVPF+KE++IKFD+  DKV   V   +    NK +                                                +MQ NF+++F ++G +RTSFR++R+ I+ER++     +AR   C
Sbjct:   56 EPYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGHTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKAD------------------------------------------------EMQHNFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 311          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: K3WSJ0_GLOUD (Choline-phosphate cytidylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ0_GLOUD)

HSP 1 Score: 314 bits (805), Expect = 2.300e-101
Identity = 156/305 (51.15%), Postives = 201/305 (65.90%), Query Frame = 1
Query:  193 FKPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV----LARTSFC 1095
            ++P    LVEG PGT +GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN+YLLVGCC D +TH+LKGRTV+ D ERYESL+HCKWVDEVVEDAPWV+ D+FI  H ID+VCHDALPY DASG++S GDVYA +K  G+F+ET+RT+GISTSD+I  I+ +YD F+RRN+ RGY  ++MNVPF+KEQ+IKFD+  DKV   V   +                                        H  V            DMQ  F+ +F +DG +RTSFR++R+ I+ER++     +AR   C
Sbjct:   77 YEPYRKTLVEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCGDEITHKLKGRTVMTDKERYESLRHCKWVDEVVEDAPWVITDEFIEKHNIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAEYDTFIRRNLARGYTGKEMNVPFMKEQSIKFDMAVDKVKHDVDGFV----------------------------------------HKWVGKA--------EDMQHGFLDLFSKDGRLRTSFRKRRKIIKERLSERLSDMAREGLC 333          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: A0A662Y633_9STRA (Choline-phosphate cytidylyltransferase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y633_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.470e-100
Identity = 143/217 (65.90%), Postives = 176/217 (81.11%), Query Frame = 1
Query:  196 KPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAG 846
            +P   KL EG PGTK+GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN++LLVGCC+D +THELKGRTV+ D ERYESL+HC+WVDEVVEDAPWVV DDF+  HQID+VCHDALPY DASG SS GDVYA +K  G+F+ET+RT+GISTSD+I  II +YD F+RRN++RGY  +DMNVPF+KE+ IKFD+  DKV   V   +    NK ++ Q G
Sbjct:   47 EPFRKKLKEGEPGTKTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTFLLVGCCSDAITHELKGRTVMTDVERYESLRHCRWVDEVVEDAPWVVTDDFLEKHQIDYVCHDALPYSDASGASSEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYTGKDMNVPFIKEKTIKFDMAVDKVRNDVDVFVHKWINKADEMQHG 263          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: A0A5D6Y8Z6_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Z6_9STRA)

HSP 1 Score: 311 bits (797), Expect = 3.130e-100
Identity = 153/294 (52.04%), Postives = 196/294 (66.67%), Query Frame = 1
Query:  193 FKPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV 1074
            ++P    LVEG PGT SGRP+RLYADGIFDLFH+GHAKAL+Q K ++PN  L+VGCC D +TH+LKGRTV+ D ERYESL+HC+WVDEVVEDAPWV+ DDF+  H ID+VCHDALPY DASG+++ GDVYA +K  G+F+ET+RT+GISTSD+I  I+ +YD F+RRN+ RGY  +DMNVPF+KEQ+IKFD+  DKV   V                                            H LV            D+Q  F+ +F R+G +R+SFREQR+QIR R+++
Sbjct:   59 YEPYRKTLVEGEPGTLSGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVVLIVGCCGDEVTHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVITDDFLEQHAIDYVCHDALPYSDASGEAAEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAEYDTFIRRNLARGYTGKDMNVPFMKEQSIKFDMAVDKVKHDVDGFF----------------------------------------HRLVGKA--------EDIQTGFLDLFRREGTLRSSFREQRQQIRRRLSM 304          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: H3GGV7_PHYRM (Choline-phosphate cytidylyltransferase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GGV7_PHYRM)

HSP 1 Score: 310 bits (794), Expect = 4.430e-100
Identity = 150/298 (50.34%), Postives = 203/298 (68.12%), Query Frame = 1
Query:  214 LVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV----LARTSFC 1095
            L EG PGT +GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN++L+VGCC+D +TH+LKGRTV+ D ERYESL+HC+WVDEVVEDAPWV+ D+F+  HQID+VCHDALPY DASG++S GDVYA +K  G+F+ET+RT+GISTSD+I  II +YD F+RRN++RGY+ +DMNVPF+KE++IKFD+  DKV   V   +                                        H  +            DMQ +F+++F ++G +RTSFR++R+ I+ER++     +AR   C
Sbjct:   58 LKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTFLIVGCCSDEITHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVLSDEFLEEHQIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFV----------------------------------------HKWISKAD--------DMQHSFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 307          
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Match: M4B8N2_HYAAE (Choline-phosphate cytidylyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8N2_HYAAE)

HSP 1 Score: 308 bits (790), Expect = 5.800e-99
Identity = 151/299 (50.50%), Postives = 200/299 (66.89%), Query Frame = 1
Query:  211 KLVEGSPGTKSGRPVRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKREGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSGSGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNV----LARTSFC 1095
            KL EG  GT +GRP+RLYADGIFDLFH+GHAKAL+Q K ++PN+YL+VGCC+D +TH+LKGRTV+ D ERYESL+HC+WVDEVVEDAPWV+ D+FI  HQID+VCHDALPY D SG++S GDVYA +K  G+F+ET+RT GISTSD+I  II +YD F+RRN++RGY+ +DMNVPF+KE++IKFD+  DKV   V   +                                        H  +            DMQ  F+++F ++G +RTSFR++R+ I+ER++     +AR   C
Sbjct:   93 KLEEGEAGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLIVGCCSDEITHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVLSDEFIEKHQIDYVCHDALPYSDTSGEASEGDVYARIKAMGKFLETRRTNGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFV----------------------------------------HKWISKAD--------DMQHGFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY9_ECTSI6.960e-20087.69Choline-phosphate cytidylyltransferase n=2 Tax=Ect... [more]
A0A835Z3L7_9STRA1.520e-13162.62Choline-phosphate cytidylyltransferase n=1 Tax=Tri... [more]
A0A8J5MIM5_9STRA2.350e-10351.32CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A8K1FT60_PYTOL5.630e-10251.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
V9ETF1_PHYPR1.110e-10150.66Choline-phosphate cytidylyltransferase n=6 Tax=Per... [more]
K3WSJ0_GLOUD2.300e-10151.15Choline-phosphate cytidylyltransferase n=1 Tax=Glo... [more]
A0A662Y633_9STRA1.470e-10065.90Choline-phosphate cytidylyltransferase n=2 Tax=Not... [more]
A0A5D6Y8Z6_9STRA3.130e-10052.04Choline-phosphate cytidylyltransferase n=1 Tax=Pyt... [more]
H3GGV7_PHYRM4.430e-10050.34Choline-phosphate cytidylyltransferase n=20 Tax=Pe... [more]
M4B8N2_HYAAE5.800e-9950.50Choline-phosphate cytidylyltransferase n=1 Tax=Hya... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1830289..1840899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score568.5
Seed ortholog evalue2.2e-159
Seed eggNOG ortholog2880.D8LPY9
Preferred namePCYT1A
KEGG rclassRC00002
KEGG koko:K00968
KEGG ReactionR01890,R02590
KEGG Pathwayko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231
KEGG ModuleM00090
GOsGO:0000003,GO:0001541,GO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004105,GO:0005488,GO:0005515,GO:0005516,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006657,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0007163,GO:0007164,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0008150,GO:0008152,GO:0008289,GO:0008340,GO:0008406,GO:0008585,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0012505,GO:0016020,GO:0016192,GO:0016740,GO:0016772,GO:0016779,GO:0019637,GO:0019898,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031210,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0042067,GO:0042175,GO:0042221,GO:0042587,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045137,GO:0046470,GO:0046474,GO:0046486,GO:0046545,GO:0046660,GO:0046983,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048592,GO:0048608,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050896,GO:0050997,GO:0051179,GO:0051234,GO:0051704,GO:0060429,GO:0060562,GO:0061458,GO:0070405,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0090596,GO:0097164,GO:0098657,GO:0098827,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1904116
EggNOG free text desc.choline-phosphate cytidylyltransferase activity
EggNOG OGsCOG0615@1,KOG2804@2759
EC2.7.7.15
COG Functional cat.IM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCTP:phosphorylcholine cytidylyltransferase
Ec32 orthologEc-15_001610.1
Exons9
Model size1322
Cds size1098
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1450.1prot_P-fluviatile_contig12.1450.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 1830513..1840899 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.858923-UTR-P-fluviatile_contig12:1830288..18305121622815512.858923-UTR-P-fluviatile_contig12:1830288..1830512Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1830289..1830512 -
1693562098.5025299-UTR-P-fluviatile_contig12:1830288..18305121693562098.5025299-UTR-P-fluviatile_contig12:1830288..1830512Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1830289..1830512 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.872865-CDS-P-fluviatile_contig12:1830512..18306111622815512.872865-CDS-P-fluviatile_contig12:1830512..1830611Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1830513..1830611 -
1693562098.5156708-CDS-P-fluviatile_contig12:1830512..18306111693562098.5156708-CDS-P-fluviatile_contig12:1830512..1830611Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1830513..1830611 -
1622815512.886112-CDS-P-fluviatile_contig12:1832771..18329511622815512.886112-CDS-P-fluviatile_contig12:1832771..1832951Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1832772..1832951 -
1693562098.530636-CDS-P-fluviatile_contig12:1832771..18329511693562098.530636-CDS-P-fluviatile_contig12:1832771..1832951Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1832772..1832951 -
1622815512.8980806-CDS-P-fluviatile_contig12:1833245..18332901622815512.8980806-CDS-P-fluviatile_contig12:1833245..1833290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1833246..1833290 -
1693562098.5406067-CDS-P-fluviatile_contig12:1833245..18332901693562098.5406067-CDS-P-fluviatile_contig12:1833245..1833290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1833246..1833290 -
1622815512.9101672-CDS-P-fluviatile_contig12:1834530..18346451622815512.9101672-CDS-P-fluviatile_contig12:1834530..1834645Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1834531..1834645 -
1693562098.5527554-CDS-P-fluviatile_contig12:1834530..18346451693562098.5527554-CDS-P-fluviatile_contig12:1834530..1834645Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1834531..1834645 -
1622815512.9286363-CDS-P-fluviatile_contig12:1835663..18358121622815512.9286363-CDS-P-fluviatile_contig12:1835663..1835812Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1835664..1835812 -
1693562099.0814805-CDS-P-fluviatile_contig12:1835663..18358121693562099.0814805-CDS-P-fluviatile_contig12:1835663..1835812Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1835664..1835812 -
1622815512.9423978-CDS-P-fluviatile_contig12:1836351..18364421622815512.9423978-CDS-P-fluviatile_contig12:1836351..1836442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1836352..1836442 -
1693562099.098742-CDS-P-fluviatile_contig12:1836351..18364421693562099.098742-CDS-P-fluviatile_contig12:1836351..1836442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1836352..1836442 -
1622815512.9532168-CDS-P-fluviatile_contig12:1836947..18370481622815512.9532168-CDS-P-fluviatile_contig12:1836947..1837048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1836948..1837048 -
1693562099.114726-CDS-P-fluviatile_contig12:1836947..18370481693562099.114726-CDS-P-fluviatile_contig12:1836947..1837048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1836948..1837048 -
1622815512.9657888-CDS-P-fluviatile_contig12:1838490..18386671622815512.9657888-CDS-P-fluviatile_contig12:1838490..1838667Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1838491..1838667 -
1693562100.0681074-CDS-P-fluviatile_contig12:1838490..18386671693562100.0681074-CDS-P-fluviatile_contig12:1838490..1838667Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1838491..1838667 -
1622815512.9788349-CDS-P-fluviatile_contig12:1840758..18408991622815512.9788349-CDS-P-fluviatile_contig12:1840758..1840899Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1840759..1840899 -
1693562102.0274959-CDS-P-fluviatile_contig12:1840758..18408991693562102.0274959-CDS-P-fluviatile_contig12:1840758..1840899Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1840759..1840899 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1450.1

>prot_P-fluviatile_contig12.1450.1 ID=prot_P-fluviatile_contig12.1450.1|Name=mRNA_P-fluviatile_contig12.1450.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=366bp
MAPKRKLRSSGEDVDGVGSESAAEAGAEVTDRAGRLERAAKKSKPQKSPP
PLPARVELSFLPGGFKPDLAKLVEGSPGTKSGRPVRLYADGIFDLFHYGH
AKALEQAKRSFPNSYLLVGCCNDRLTHELKGRTVLKDTERYESLKHCKWV
DEVVEDAPWVVEDDFIAAHQIDFVCHDALPYGDASGQSSSGDVYAHLKRE
GRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQ
AIKFDIVRDKVTRRVGKVIKDRQNKINQQQAGRALKIKGAKGRAGGSGSG
SGATDGKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRR
QIRERVNVLARTSFC*
back to top

mRNA from alignment at P-fluviatile_contig12:1830289..1840899-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1450.1 ID=mRNA_P-fluviatile_contig12.1450.1|Name=mRNA_P-fluviatile_contig12.1450.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10611bp|location=Sequence derived from alignment at P-fluviatile_contig12:1830289..1840899- (Porterinema fluviatile SAG_2381)
ATGGCTCCCAAGCGCAAGCTTCGCTCGTCCGGGGAGGACGTGGACGGAGT AGGGAGTGAGTCCGCCGCTGAAGCCGGTGCAGAGGTCACGGACAGGGCGG GAAGACTTGAACGCGCAGCGAAGAAGAGCAAGCCACAGAAGGTGCGAAGC CGCTCTCGCTCCATCGAGCGAGCGCGCGAGATGTCCATCATTTAACCTCT TCTCGTTTATGCGTTGGGAGTAGAGAGAGAGCGCGCGCGGGGGGGGGAAG AGAGAGTGTGAGAGAAAGGGCCTGATTGTGACTTGGTACAGAGGCTCCTG TTGCAGGGATAGCGGAGGGCGCTTCGCACATGCCGGTAGTGTGTGGTGTT CCCCTCCTTCTCCACATACGGAAGCGGCTGCCGGCTTGATTCCGCCGCGC AGTATTCCTGCCGGGGGTCGTGATGCTTCTGAGAGAACAGGGTGTTTGCC TGCACCTGCTGGGCGTAGAGCCGTGGTTTGACCCTCTGAACTTGGAGCAG GCTCTTGGCGATTGTACATGCGCGCTTGGTCGACTCATGGTGATCGAAAT GAACCCCAAAATGTGTTCATGCGTTACCTGTCGCGTCCTCCTCAAATCGA TATTTCTTCAGGTAAGGCAACGAGTCTAGACGAAACGATGCCGCCCACAT CATATTTCACCCAGTTCTCGGACTTTGGGCACGCCTGTTGGCAGCGGCCC TTGTGCACCCGACCCGTCCTTACAGAAATCATCGGCTCGGGTTTGATATG CGAAGCAAGTGGATAGGCTCGCAGGGTTTGGGGTCGACTCCAGATTCCGC ATTGTGCACTCGCGATAGTCCCTTCCCCGCTGAAACAAGCGATTTGTATT TCCCTTTCAACTAGCATCTTCGCAGGGCTGCGTGTGGCTTGTACCTCCCC AGTTATTGGCGTAGTAACTGGGCTAAGTCAAGGTAGTATACAAGCCGACG GGGAAATTGGTTGCAGCCGTGACCATTTCCCCTTCTAGACGCAGCGTCCA GGTGGAGACAACCCCGGATATGCGCAAGTGGTGGTTGGTTGCACTCTGGT GCCGTGCGATAGAGCAAGCCCTGCTGTGGGGAGGGCGGTTACGAATTTTG CACGTGTCCAGCCGGGTATAGATGAAGGCCTCGCATCGTCCTTCAGATTT GGTCGTCCGCTTGAAACGATGGCATAGATTCATTGATGTGCAGATAGGTT TGGTGTGGGGGTTTCAAACCCGAAATTTTTTTGACAGCCACTCAACCGGG CATGACTCCACAACGCTGGACCCCCCACACGCATCCAGCAGAAGAAAGAG GGCGTCAGCGTAAAGTTTGCAATAACCCCTGTGGCGTACACGAGGGTTGG TGCCTCCACTCTTGTCGTCCAGATGCACACTCCAAGCTTCATCGAAGGTA CACCTTTACCGAAGAGACGGCGTTGGCGGGGCCTCGTGGAGACAGCCTCA AGGAGGTATCATTTCAGACCGTGGCCGAGGATTAGAAGCCACCTCTGCTT CACAAGTAAAGCAGTAGTAGCTCCCTTGCGGAAACCGATCACGTCTATCT ATCACCGACGATTTCACGTCCGGATGATCACGAAGCATGCACAAACAGGC GGTCTCCCGTTGCCGCTCCACGCGGGACTGACCTCCGCCGCTTTTCTTTC CAAAGACCAAGCCAGAAAAACGTACCAAGAAACCACAGGGGAAAATGAGA CAATTCAACGACACAGGTATTTTTGAAAGCACCCCTTTCATTTTAGCGTG CCTCTTGTGCTATACCCGCTGCCGTAGGCAATCAAATGGCGCGCGTGCTC GACTTCCTTCCCCATCGGAGTTGTGTCTCCGAACACTCAAATGCGTGCCC CCCTAGCAACTGTAGCTTAGATCGCATGGTATATCACACCCCGGCGACAA TTATGTACCAGGTAGCATTAAAAAGATTTATCACCGGGATGTGAGTTCTT GCAGAATTGTCACCGAGGTGTGATTTCTTATTCGACCCGACTTCTTGATT TGAGTACTTTTCGTTTTGGGGTGCAATTCGAGCCATCAACATAACCCAAC AGAGATTTATCGTTTTTCGGGAGTGTGATTCCTGAAGTCGGGTGTGACTT CTTATGCGATCTACGATTCCGCTATCCATGGTGTCGAAAACGGGTGCCCA CCTATGCTTGACTAGCCGCCAATGTCATCCGCCATGCCTCGTCCTTAGAA AATCGAGTGCCACGTGTACGTACCACACGCAGAGCCCCCCCCCGCTGCCG GCTCGCGTGGAGCTGTCATTCCTACCGGGGGGCTTCAAGCCGGACTTGGC CAAGCTAGTGGAGGGATCCCCGGGCACAAAGTCCGGAAGGCCGGTTCGGC TCTACGCCGACGGCATCTTCGACCTGTTTCACTACGGCCACGCCAAGGCG CTCGAGCAGGTAGGGTTGCGAGTGTTAGGATGATTTCCATGGTTCCATAC TTGGGGTCCCGACAATAATGGGGGCTCGGCAACAGGGGAGTGATTTGGGG TGCGATCTGACACGATCGCTGTGTCTGTGGTCATGACCTCTACACGCCGA CGGCATCTTCGACCTGTTTCACTACGGCCACGCCAACGCCCTTGAGTAGG GAGGCCATGCTCGTGATGTGAGGCGCGATCAGCTCTTGTACGGTTTCTCT GTGGCACTCGTTTCCTCCCTTCATCCATGTCGAATATGGTAGATATACTA TTCAAATGCATGTTTTTGCAGCGAGTTCGGTAGCGGTAATGGGTACTTGG CAGATATGGGGTCGCGGGGTATGTGAGGCATGATCAGCTTTTGTACGTTT CCATTTGGCACTCTTTTCCTCCCTGCATCCACGTTGGATAGGTGTTACGA TTCGTGTGCATATTTGTGCAGCGAGGACGGTACCGATAACGGATGCTTTG AAAGTAAGGGGTCGCGGGGGGCGTCCTGGCGCGATGATTGTTTTTGTGGC CGGTCCTGCTCTACGCCGACGGTATCTTCGACCTGATTTACTATGGTCAC GCCTAGGCGCTCGAGCAGTAGGCCATATGCTTTGTGTCAGCCACAAGCAC TTTGTCCACGTTTGTTTTTCTTGTACTTTTTACGGTTCCAGATTAGGGGG TACCGATATTGGGTGCTTCGCAGGAAAGGATCCGTGGGGTGCGTTCTCGC ACGGTCATAGTGTTTGTCGTCGCAAGGTCATTACGACGACGCCATATTCG ACCCTGTTTCACTACGGCCACGACACGACGCTCGAGTAGGTATGGCTGTG CGTGGTGTCTGTGTCGGTCTCCCGGGATGTGCTCGCGAAGAAGAAGGGGG GGCGTGACTCGTGTGAGCGGTGCGCGTGTGGGTCGGTGGGATATTTTGCG GTGCTTGTCTGTTCGCTTGTCTGCCCGTCTATCTCTCGGATCGTGCTCAG CGAGAATTGCGGAGGGGGGGGGGGATGATGTGTGGACGGTGCTTGTGTTT GTAGTGTGTGTGCAATGGTCCCTATCTGTTCTGGCGCAGTCTACACAACT CTCGTGACGTATTGCCAACGATCAGCGGGATCACGCAGGATAAATAAGGT CCCACTTGGGTCCTTCAGTCCTTCCTTGGTCAGGACGTTGACCCACTCAA TCTGCAACCAACGGCGTCACCGGATGAAAATATTCTTGGCACAGGGAAAG GAAAGGAAAGCTTTGCACCGGCTACACGAGAATGAGGTCAACGAGATTCA ATGCTTTGTGTTCGCGTTCGTGCCTGTTTCCCATGTTTTTTTTTTGTGCA TGTGTCGTAGTGTGTGGTGTGTTCAATGTCGGTAGTTTTCTTCCCCCCCC CTCATCCCCATCCCTATCCCCATCTTCTCTTATTCTATGTTGGTACGACA GGCCAAGCGGTCGTTCCCTAACTCGTACCTTCTGGTGGGATGCTGCAACG ATAGGCTCACGCACGAGCTGAAGGGGAGGACCGTCCTCAAGGACACCGAG AGGTTTGCGCGAGAGAACCTTTTGACTGCACCTTGTTTCGTTTTTTTTGT GTTGCTGCCGCTGTTGCCTTTTGCATAGTTATCGTTCTTGTCGTTCGTTT ACCATGTGAATCCTCAATGAGCAGAAGTAAAAAGAATAGTGCACACAAGA CACACACCTTCTCTCGGCTCGTTCATCGAAACCATTTTTCTCGTTCTCGA CCCAATGCTCATGCGAACAGTTCTTGACAAATCCCGTCCTGTTCGCAGGT CGCTCATTTCGGTCGTGCCCCGCGCTCCTTCGTAGATCTCCGGAACAATT CAGCCGTGCTGCGTCCCCACGCCCCCCGCTATGTTTAGTTCTCCCTCTCT CCGCCTCTCCTGCTTCGATCACGACCCGCTCCATCCCTCTCCTTCGTCTG TCGCTTTTCTTGGTGTTTAGTCATCGCGGATCAGCTTTCGTATCGCTTTG TGCCGTGCATCACGCTTGTTTGCTTCAAACACGACACACACCCGCGCGCA TGCACAGATACGAGTCACTCAAACATTGCAAGTGGGTCGACGAGGTGGTG GAAGATGCCCCCTGGGTGGTGGAGGACGACTTCATCGCTGCCCATCAGGT GGGTCTAGGTGCCGTCGGTAAAAGTTGCGGCGGCAGTGATGGCGGTGACC CGAAGCGGTTGCGGTAGCGGGGGCGGTGGTCTTGATCGGGATGCAGGCCT TCGTGATCTGGATCTTGTAGGTCGGGATTGTTATTGGATTTCTTCTCGTC GTTGCTTGTGTTTGTCATCGGGCGTACTGCTGAGGACGCGTGCGATGTTG GGGAAGTGGTGTGCTGGCGTCTTGTGCTATCACTTTTAGAGTCGCCGTCA AGCTCTGGGAGTCGAATGACCTCCTTGCATCACCCCAAGCTTTCGCTTCA ACTTTTCAGCCCTGTACCAGTCCCGTCACGCATGCTATGGTTGCCTTCCC TGAGGTGAGTTTGCCTTCGCTGACGTGGCATCATCCATTTCTCCCCTTTT GTTTTATGCTCAACACGAACGCGCACACACACAAACACTCACACAGAAAT TATTCACCGAGCCCCATGCAGAGTTGCTTGCAGAGGAGGCTCATGCCTTC TTCATCGTACAATATATTGTCTCTTCCCCGCTGCCAGATAGATTTCGTCT GCCATGACGCCCTCCCGTACGGCGACGCCTCCGGGCAGAGCTCGTCGGGC GACGTGTACGCTCATCTCAAGAGAGAGGGACGCTTCGTGGAGACACAGCG CACGGAGGGGATCTCCACGAGTGACATCATCACGAGGTCCGTGTGCGATG TGTGTTGCGTCCATTTCGTCAAACAAAAATCACCAGTGTTGTTTGGTTCT CCCGTTTTTTATTCCACTAGATTCAACCCAGACTCTCGTAGCGCTGCAGC TGCTTCATGCATTGATATTTTCAGTTCTCTTGTTGTACTTGTGGCGATTT CGGGAATGCCGCAGGCGCTTGCGTGGGAGGGGGGGGTGTACTCTCAAGCA ACAGTCGATCGTTTGTGGCTTGTGTGCGGAAGCTGAGGCTGCGCAAAGCA CGGAAGAGACGGCATTTTCAATGCGTGTTTCTCTTTTTTTTACTCCGAGG GGTTGTGTTGTTGCGTTAATGTTCACCTAGTCTTTGCTCGTCGCCTTGTC TTCTTTTATTTGTAGCAAGGCGGAGGATGATTGCCCTTCCGTCAAGGCCG ATTCTGCACTCGGTAGTGCGCCTCACCGGCTTCGTTGTTGCGTTTTTTTA TGATTTTTTGTTTTTTTGGTGGGTTGTGTGTGTATTCGTCCCTTTTATTC TGGCGAGTGTTGCCCCTTTTTTGGTACAGCTGCTGTTCTCTACGCCAAGT TTCGGTGAACGCAGTGCATTTCACGTGTTCGGTGTGTTTTCGTCGTACAA CTACAACCACCCGGGTCACACAGGAGGGGATAAACATTTTTTTTTTTTGC CTGTTGTTTTTTCTTTTTAACCCCACCTTCCTCCTGCGGTGCGTGCTTCA TTTTCCACCGCGAGCAAGGTTCATCCGCCCCCTTCCCTCGCCAACAGTAA AGTCGAACTTTGCACACTCGCGAGCTCTTCAGCGTTTTCCGCTTTCTACC ACAAAGTTGCAAAAATTAACCCCCATCGGGATTCGAACGCACGGCTTCGG TGCTAGCGAGATTTCAAGGTCACCCACTAGGCCACTAGGGCGACCGATGC GCGGCAAGTGTTTCCCTTTATGTTTGTTTTGTTTCTTTCCGTGCGGTCAT GCGTGGGCACGATTCGATCTGCTTGCCTGCCTGCACGCCCCGCAACACGC ACAGCATCATCCAGGACTACGACGTGTTTGTCCGGCGGAACATGGAGCGC GGCTACAACGCGCGGGACATGAACGTGCCATTCCTTAAGGAGCAGGCCAT CAAGTTCGACATCGTCAGGGTGAGTTGACAAGGAGCGGCTTGATGGGCTG TGGCTTCTGCGTCTGTCTGTCTGTCTCTCTGCCTGTGTGTCTGTGTGCCT TGCCTATCTGACACGCTGGCTGGCTTACTGATCTGACCACTACACCTACT GACTGCCCGCCGGTCTTCCGTATTCGGCGGGAAATAGGCACGCACCTGCT TTAGTCCAGAATGAGTGATCGTACCCCCGCATTTTTTATCCCAACTTTTA TGCACCCTGTCTACTTTGTCATCGCTCGCGTCATGTCTGAACTGAGGGGG GGGGGGGGTACTCATACTCATAGTGGTGCATGCCGTAGTCGTTAGACCAT TGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCG GACCAGGCTCTCACACCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGA GTCGCATGCGCGCTGCATCCTGCTGAGGGTGTTCGGCACCTTGTGCTTAC TTCCTTACATGCGGATGACGCTGCGTATGACCTAATTTATTTTCTGGTGC TTTCACTTTCAGAGACAGTTGCAAGCACTGTGTAACTGCCTCGAGGGTGC TTGACCATTTTAACACAACGTGGAGCAATCATCCCCCTTGCCCGGAGTGT GGCTTCTCCACCCCGCACAACATGATCTTCTCGACCACCATTAAGGTTAC CGCAAAAAAAAACCAGCGGAAAAAAAAAGACGGTAACCTGGTTGCCGAGT TCACGAAGTGAACTGGGTTGTTTTACAACGTCGTTGCCAAGCGACGAAAA CCCAATCCCGATGGCAAACACCGAGGTGAGAGCCAGCGGGAGACAGGGGG GGGAGGGGAAAAACCTGTGCAAGCCACGGGCGTTTGTTCTGGGGCCCGAA AACACCCGAAAACTACTCTCTGGGTCCTTGATTTCAACGGTCGAGGAAGC CATCGACCATCGGCGTCACTCCCAATGTGGCAGGGCATTTGGGAAACCAT CCGGCAATTTCGTTCAGCTGTTTTTTTTTTTCCACAACTTGTGATTTGGA CGTGCTTCATATTGCAGGTCATAACCTATTTGAGTGGGTGCGGCTCCCCG AAGCGAGCGTTTGAAAGTTGTGGGTCGCCGCATACATAATTTCCGAAACA CTGCTGATATGGCCTATATATTTTATAATTGATTGATCGACCTTGCGTGT GCATTCGACGTGCGCCACGCGTGCCCCGCCTACTTTTTGTGAAAATCGAT CCGACACAGGACAAGGTTACGCGTCGGGTTGGCAAGGTTATCAAGGACCG CCAGGTGTGTGTGAGCTTATGCGCGTGCGCGTGCGTGCGTACGTGGGCGT GTGCTTGTGCGTGCGCGTGTACGTACGTGTATGTTGCAAATTTCGCTGTC CAGTATGAATCCGTGCTCGCGTGGACGAAAGGGTGCCCGATGATATCGTG CCATTTCTGAGCGGATCGAACGGCCGAAGGCTTGTTGCTGGTCTTGAGAT TCGCGTCGTTTTCATACCCGTCACACCCAACACAATCGTATGCGATTGGT GCTCGCTTGCTGTGTCTTTCGGTGCTACCGCCGCTGCTGGACCCTCAGAA CAAGATCAACCAGCAGCAGGCGGGGCGCGCCCTCAAGATCAAGGGCGCGA AGGGCCGGGCGGGCGGTAGCGGAAGCGGTAGCGGCGCGACGGACGGCAAG GAGCGGCACAATCTCGTACTGGACCTCGGCAACCACGCCCAGGAGACGAT CACGGATATGCAGCGAAACTTCGTGCAGGCACGTACACTCTAGTGCTGTT TCCGTCAAGTTGGCGACCGGTCTCAGTCTTGCTTTCAGTTTATTCTACAT TTCTAAGGTTTTCTGGAAGACAAGACGGTGAGCGGCTGACTTGTCCAGTG TACAGCAGGCAGAGGTTACTTCTTCTGAGTTTAGCCGCTTCGTCACGGAT GTGTAGAGAAACCTGGTGCGCAAACGTCCTCGTATACAATCCGGGGAGGG GGCTGATACGCATGAGCTGATAATCGCTCGGGTGGGTCCATCGTCATGGA TACTGTGACAGATGATATTTCAAACTCAAAATGCGACGCAAGATACAGCA CCCCATCTGAGCCATTATCCAACGCGTTGTTCTCCGCTCTTGTCAAAATG CAAGCCTCACAAACCTGTCTCCCCAAATGTGCTGTCACATATATCGAACG CCACCGCTCTCGGCTCTGGCACGCTATGGAGGAATGGAGGTTCCGAATCG ACGCTGAGGTTTTGGTGTTGAGGTTTTGGCATTCTGTACCGTCTACTGCA GTGCCATGCCGGCACGGGGAGCCGCGGCAACCGTGCGGCTGGGTACCTTC TTCGGGCAAGAGCGCGCCGTCCCACCCCCAGCGCTTTCCTAGGACACCGC AGTTGGAATGTTAGGGTGTTCGCGGAGTCCGAATTTGGTTCTGTGCTTGA AGTTACAATCATAATCAAGTCCAAACCCGATTTTGGTTTCAAAAAGCGTC CGAAGGGCAATGTGGTGATTTCCTTTTTGGTTGCAGCGAAAATGCGGCAC GTGTCCCCCCCGCCCTCGTCCGCCCCCCTGTCCGAGCTGGTTCACAAGGC AAACACTCCCAGCGTCATCAAATGAGACCTCCGAAAATCAGACCCGGCAC TCTTGACAGCACACAGACGCAGCAGTGCCCGCTGTATGGCAGTGAACGTT GTGAAAGGTGTTGGCACGAGGTAGAGATGACGTGCTCTTCAACTTTTTTC ACCGCCACACACACCGTTTCCTCCATCGATATTGTTCGCGCACCAAGAGG AAGCACCCACGGACTCTGCAAAGCATATCCAAAGGAAGTCTGTGACATAT CGATATGAGTTGACGCGGCCGCTGGAGAAGGGTTTGTCTCCATGCCTGAT TTCCATGCGTGTCAAATGTTCAAAGGCGCGAACATGCAGCGCAAACACAT GAAAGCACCCACGCCCGCCAAACGGCAGTGTGTAGGTCCGTGGGTACAGC TTGCTTGAAACTGAAACTGAAGAACCATGTGGCCAACTGCCCTTCCAGAC AGGAGGGATTGCCCATGCTCGACCAGCTCTGTAATGTGGACTCCGCCAGA GTTCTTGTGATCTTCACAGTCTTGTCTCTCTTGGGGTAAACGGAAATGCG CTGGAAACGTGCTGCGCAAGGACAAACTCGTTTCCGTCGGACTTCTTGCG AAAGTCAAAGTTCCGTTCAATCCTTCGGACTTCGGTCTTCGGGGGTACAA AACATGCGCAAAACAAAAACCGAAGTTGGACTTCGCAAGCGCTGTAACGA CACCGTCGTGCTCACTTGTTGTATTCTCCGCCCATCTTCTTTTCTAGCGC TACCACATCGATCACCGCTACTTTCGAGAAGCCCTCTTCTGTATGAACCC GGCGAGCGCCCTCTCGCCCATTTAACCGAAAAGGCATAGGGGTGCTGCCG TTCAGGATTACTGCGACCCGATGTGGTTAGCCAGACGTGATACCTGAGAC AAGTGAAAAAGGCTCCATTTGTGGCGATGGAAATGATGAAGACTCTCTAA CTCTAGAAGGGGTTCCAAGAGGTTCACTCTCGCAAGGACTGAAATTGAGC TGAAAGCAGGCGGGAAGAATCCGGGTGGCGCCTGTATGAGAAAAGTTAAA GTCCGAAAGCCTTTTGATGAACAATAGCAAACGTCACTCCCGTTCATCAT CTTGATGTCGCCGAAACGGCAACTTGAAGCACCTCTTAATCTGTGTTGCT GCTGCCATGCACGCTCACATCGGGGAGCCCCGCGCATTCCGCCCTGCATG TTCGCATCAAGAACCCCCCTGACGGCTACCGCATCCGTGACTTGACAATG CCCCCCCGCCTGCTTGAGGCCCTCCCCACAAACCGTCCGATGTAGCAATT ATTACGCCCCCCTCCCTCCGCCCCCCCCGTGTGCACAGATCTTCGACCGT GACGGGGCGATTCGCACGAGCTTCCGCGAGCAGAGAAGGCAAATCCGTGA GCGCGTCAACGTACTCGCCCGGACCAGCTTCTGCTAACTTTTGATGACGA TCGGAGCAGACGCAGCGTGGAGAAGAGGCGGCAGAGCGCGAAAAAGGAGA GGGCGATGAGAAGCGGGGAAAGAGACAGCGAGAGACAGAGGGAGACAGAG AGAGAGGGTAAAGACACTTAGGAACTTCGGCAACGAGAAAGAGATGAGGG TTCAGAACGACAGACGAGGATCGCTTCGCTGCCGGTCCGGCAGCTGGGTG TTGGTCACGTG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig12:1830289..1840899-

>mRNA_P-fluviatile_contig12.1450.1 ID=mRNA_P-fluviatile_contig12.1450.1|Name=mRNA_P-fluviatile_contig12.1450.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2196bp|location=Sequence derived from alignment at P-fluviatile_contig12:1830289..1840899- (Porterinema fluviatile SAG_2381)
ATGGCTCCCAAGCGCAAGCTTCGCTCGTCCGGGGAGGACGTGGACGGAGT
AGGGAGTGAGTCCGCCGCTGAAGCCGGTGCAGAGGTCACGGACAGGGCGG
GAAGACTTGAACGCGCAGCGAAGAAGAGCAAGCCACAGAAGATGGCTCCC
AAGCGCAAGCTTCGCTCGTCCGGGGAGGACGTGGACGGAGTAGGGAGTGA
GTCCGCCGCTGAAGCCGGTGCAGAGGTCACGGACAGGGCGGGAAGACTTG
AACGCGCAGCGAAGAAGAGCAAGCCACAGAAGAGCCCCCCCCCGCTGCCG
GCTCGCGTGGAGCTGTCATTCCTACCGGGGGGCTTCAAGCCGGACTTGGC
CAAGCTAGTGGAGGGATCCCCGGGCACAAAGTCCGGAAGGCCGGTTCGGC
TCTACGCCGACGGCATCTTCGACCTGTTTCACTACGGCCACGCCAAGGCG
CTCGAGCAGAGCCCCCCCCCGCTGCCGGCTCGCGTGGAGCTGTCATTCCT
ACCGGGGGGCTTCAAGCCGGACTTGGCCAAGCTAGTGGAGGGATCCCCGG
GCACAAAGTCCGGAAGGCCGGTTCGGCTCTACGCCGACGGCATCTTCGAC
CTGTTTCACTACGGCCACGCCAAGGCGCTCGAGCAGGCCAAGCGGTCGTT
CCCTAACTCGTACCTTCTGGTGGGATGCTGCAACGATAGGCTCACGCACG
AGCTGAAGGGGAGGACCGTCCTCAAGGACACCGAGAGGCCAAGCGGTCGT
TCCCTAACTCGTACCTTCTGGTGGGATGCTGCAACGATAGGCTCACGCAC
GAGCTGAAGGGGAGGACCGTCCTCAAGGACACCGAGAGATACGAGTCACT
CAAACATTGCAAGTGGGTCGACGAGGTGGTGGAAGATGCCCCCTGGGTGG
TGGAGGACGACTTCATCGCTGCCCATCAGATACGAGTCACTCAAACATTG
CAAGTGGGTCGACGAGGTGGTGGAAGATGCCCCCTGGGTGGTGGAGGACG
ACTTCATCGCTGCCCATCAGATAGATTTCGTCTGCCATGACGCCCTCCCG
TACGGCGACGCCTCCGGGCAGAGCTCGTCGGGCGACGTGTACGCTCATCT
CAAGAGAGAGGGACGCTTCGTGGAGACACAGCGCACGGAGGGGATCTCCA
CGAGTGACATCATCACGAGATAGATTTCGTCTGCCATGACGCCCTCCCGT
ACGGCGACGCCTCCGGGCAGAGCTCGTCGGGCGACGTGTACGCTCATCTC
AAGAGAGAGGGACGCTTCGTGGAGACACAGCGCACGGAGGGGATCTCCAC
GAGTGACATCATCACGAGCATCATCCAGGACTACGACGTGTTTGTCCGGC
GGAACATGGAGCGCGGCTACAACGCGCGGGACATGAACGTGCCATTCCTT
AAGGAGCAGGCCATCAAGTTCGACATCGTCAGGCATCATCCAGGACTACG
ACGTGTTTGTCCGGCGGAACATGGAGCGCGGCTACAACGCGCGGGACATG
AACGTGCCATTCCTTAAGGAGCAGGCCATCAAGTTCGACATCGTCAGGGA
CAAGGTTACGCGTCGGGTTGGCAAGGTTATCAAGGACCGCCAGGACAAGG
TTACGCGTCGGGTTGGCAAGGTTATCAAGGACCGCCAGAACAAGATCAAC
CAGCAGCAGGCGGGGCGCGCCCTCAAGATCAAGGGCGCGAAGGGCCGGGC
GGGCGGTAGCGGAAGCGGTAGCGGCGCGACGGACGGCAAGGAGCGGCACA
ATCTCGTACTGGACCTCGGCAACCACGCCCAGGAGACGATCACGGATATG
CAGCGAAACTTCGTGCAGAACAAGATCAACCAGCAGCAGGCGGGGCGCGC
CCTCAAGATCAAGGGCGCGAAGGGCCGGGCGGGCGGTAGCGGAAGCGGTA
GCGGCGCGACGGACGGCAAGGAGCGGCACAATCTCGTACTGGACCTCGGC
AACCACGCCCAGGAGACGATCACGGATATGCAGCGAAACTTCGTGCAGAT
CTTCGACCGTGACGGGGCGATTCGCACGAGCTTCCGCGAGCAGAGAAGGC
AAATCCGTGAGCGCGTCAACGTACTCGCCCGGACCAGCTTCTGCTAAATC
TTCGACCGTGACGGGGCGATTCGCACGAGCTTCCGCGAGCAGAGAAGGCA
AATCCGTGAGCGCGTCAACGTACTCGCCCGGACCAGCTTCTGCTAA
back to top