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Homology
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: D8LDE7_ECTSI (V-type proton ATPase proteolipid subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDE7_ECTSI) HSP 1 Score: 264 bits (674), Expect = 4.720e-83 Identity = 148/165 (89.70%), Postives = 158/165 (95.76%), Query Frame = 1
Query: 1 ISEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
IS DGCP+WAP VGFTGV+FALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSI+APQ+GVTVYSA+TSFAHLAAG++CGLSG XXXXXXXXX GV+A+GQQEKLFVGMILILIFAEALGLYGLIVALILSQ TY+CD
Sbjct: 4 ISVDGCPIWAPFVGFTGVMFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSISAPQSGVTVYSAFTSFAHLAAGMACGLSGXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQTYSCD 168
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A6V1NP00_HETAK (V-type proton ATPase proteolipid subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP00_HETAK) HSP 1 Score: 221 bits (564), Expect = 1.120e-66 Identity = 129/165 (78.18%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 1 ISEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
+S + CP WAP G+ GV ALV AN GAAYGTAKAGMGIGAMGVMHP LVMRNIIPVVMAGVLGIYGLIVSVI+ GSI+AP +T YS+YT FAH+AAG+ CG+S LXXXXXXX GDAGV+AIGQQEKLFVGMILILIFAEALGLYGLIVALILSQN C
Sbjct: 1 MSTEDCPTWAPFFGYLGVSCALVLANTGAAYGTAKAGMGIGAMGVMHPGLVMRNIIPVVMAGVLGIYGLIVSVIIQGSISAPGT-LTKYSSYTGFAHMAAGLCCGISALXXXXXXXVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNVVECS 164
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A835YJ26_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ26_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.790e-65 Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 4 SEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQ-NGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
S + CP WAPL GF GV +LV AN GAAYGTAKAG+GI +MGVMHP +VMRNIIPVVMAGVLGIYGLIVSVILLG+IT GVT YS ++ FAHLAAG+ CG+SGLXXXXXXX GDAGV+A+GQQE+LFVGMILILIFAEAL LYGLIVALILSQ +Y+C
Sbjct: 3 SMETCPTWAPLFGFLGVAASLVLANTGAAYGTAKAGLGIASMGVMHPGMVMRNIIPVVMAGVLGIYGLIVSVILLGTITGTTPTGVTTYSTFSGFAHLAAGLCCGMSGLXXXXXXXIVGDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCS 167
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A7S3GT47_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT47_9STRA) HSP 1 Score: 212 bits (540), Expect = 5.550e-63 Identity = 124/165 (75.15%), Postives = 143/165 (86.67%), Query Frame = 1
Query: 1 ISEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQ-NGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 492
+S + CP AP GF GV AL FAN GAAYGTAK+G+GI +MGVMHP LVM+NIIPVVMAGVLGIYGLIV+VI+ GSIT P +G T YS++T +AHL+AG+ CGLSGLXXXXXXXXXGDAGV+A+GQQEKLFVGMILILIFAEALGLYGLIVALILSQ +++C
Sbjct: 5 VSRETCPTSAPFFGFMGVTAALCFANIGAAYGTAKSGVGIASMGVMHPGLVMKNIIPVVMAGVLGIYGLIVAVIIQGSITVPSADGATKYSSFTGYAHLSAGLCCGLSGLXXXXXXXXXGDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSFSC 169
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: B8BTR9_THAPS (V-type proton ATPase proteolipid subunit n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8BTR9_THAPS) HSP 1 Score: 208 bits (530), Expect = 1.340e-61 Identity = 123/162 (75.93%), Postives = 138/162 (85.19%), Query Frame = 1
Query: 10 DGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
+ CP AP GF GV ALVFAN GAAYGTAK+G+GI +MGVM+P LVMRNIIPVVMAGVLGIYGLIV+VI+ GSI APQNG++ YS YT FAHLAAG+ CGL XXXXXXXXX GV+A+GQQEKLFVGMILILIFAEALGLYGLIVALILSQN++ C+
Sbjct: 2 ETCPASAPFFGFMGVTAALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSIVAPQNGLSQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVCE 163
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A7S3LI96_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LI96_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.050e-60 Identity = 122/165 (73.94%), Postives = 139/165 (84.24%), Query Frame = 1
Query: 1 ISEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
+ + CP AP GF GV ALVFAN GAAYGTAK+G+GI +MGVM+P LVMRNIIPVVMAGVLGIYGLIV+VI+ GSI +PQNG++ YS YT FAHLAAG+ CGL XXXXXXXXX GV+A+GQQEKLFVGMILILIFAEALGLYGLIVALILSQN++ C+
Sbjct: 52 VEMETCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSILSPQNGLSQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVCE 216
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A7S2GLL8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLL8_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.010e-59 Identity = 120/164 (73.17%), Postives = 137/164 (83.54%), Query Frame = 1
Query: 4 SEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
+ + CP +AP GF GV ALVFAN GAAYGTAK+G+GI +MGVM P+LVMRNIIPV+MAGVLGIYGLIV+VIL GSIT P GVT +S+Y+ FA LAAG+ CGLSG XXXXXXXXX GV+A+GQQEKLFVG+ILILIFAEALGLYGLIVALILS Y C+
Sbjct: 9 AVEACPTYAPFFGFMGVSSALVFANIGAAYGTAKSGIGIASMGVMKPELVMRNIIPVIMAGVLGIYGLIVAVILQGSITKPTEGVTKFSSYSGFAFLAAGLCCGLSGXXXXXXXXXXXXXGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSMQIYECE 172
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A7R9WX88_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX88_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.650e-59 Identity = 123/161 (76.40%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 10 DGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 492
+ CP AP GF GV ALVFAN GAAYGTAK+G+GI +MGVM+P LVMRNIIPVVMAGVLGIYGLIV+VI+ GSITAPQ GV+ YS YT FAHLAAG+ C XXXXXXXXX GV+A+GQQEKLFVGMILILIFAEALGLYGLIVALILSQN+Y C
Sbjct: 83 ETCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSITAPQGGVSAYSLYTGFAHLAAGLCCXXXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSYEC 243
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A7S2RP84_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RP84_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.100e-58 Identity = 118/165 (71.52%), Postives = 135/165 (81.82%), Query Frame = 1
Query: 1 ISEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 495
+ + CP AP GF GV ALVFAN GAAYGTAK+G+GI +MGVM+P LVMRNIIPVVMAGVLGIYGLIV+VI+ G+I P+ G+ VYS ++ FAHLAAG+ CG XXXXXXXXX GV+A+GQQEKLFVGMILILIFAEALGLYGLIVALILSQN Y C+
Sbjct: 5 VDMEACPASAPFFGFMGVTAALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGAIKKPEGGLAVYSLFSGFAHLAAGLCCGXXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNGYDCE 169
BLAST of mRNA_P-fluviatile_contig12.1444.1 vs. uniprot
Match: A0A024U171_9STRA (V-type proton ATPase proteolipid subunit n=10 Tax=Eukaryota TaxID=2759 RepID=A0A024U171_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.670e-58 Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 1
Query: 1 ISEDGCPVWAPLVGFTGVLFALVFANGGAAYGTAKAGMGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVTVYSAYTSFAHLAAGISCGLSGLXXXXXXXXXGDAGVKAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYT 489
++ + CP AP GF GV ALVFAN GAAYGTAK+G+GI +MGVM P+LVMRNIIPV+MAGVLGIYGLIV+VI+ GSI P TVY +YT FAHL+AG+ CGLSG XXXXXXXXX DAGV+A+GQQEKLFVGMILILIFAEALGLYGLIVALIL+ T
Sbjct: 5 LASELCPTSAPFFGFMGVTSALVFANLGAAYGTAKSGVGIASMGVMRPELVMRNIIPVIMAGVLGIYGLIVAVIIQGSIDVPNGKDTVYGSYTGFAHLSAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILATKKST 167
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 196.4 |
| Seed ortholog evalue | 8e-48 |
| Seed eggNOG ortholog | 2880.D8LDE7 |
| Preferred name | ATP6V0C |
| KEGG ko | ko:K02155,ko:K04345,ko:K15542 |
| KEGG TC | 3.A.2.2 |
| KEGG Pathway | ko00190,ko01100,ko01522,ko03015,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04142,ko04145,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04721,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04966,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05120,ko05146,ko05152,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05323,ko05414,map00190,map01100,map01522,map03015,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04142,map04145,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04721,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04966,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05120,map05146,map05152,map05165,map05166,map05169,map05200,map05203,map05205,map05323,map05414 |
| KEGG Module | M00160,M00695 |
| GOs | GO:0000003,GO:0000041,GO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0006403,GO:0006605,GO:0006623,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006826,GO:0006873,GO:0006875,GO:0006878,GO:0006879,GO:0006885,GO:0006886,GO:0006887,GO:0006897,GO:0006955,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007040,GO:0007042,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007292,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008553,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010506,GO:0010646,GO:0010647,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015931,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016241,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0019899,GO:0019953,GO:0019954,GO:0022414,GO:0022603,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030004,GO:0030111,GO:0030139,GO:0030141,GO:0030177,GO:0030587,GO:0030641,GO:0030659,GO:0030666,GO:0030667,GO:0030670,GO:0030728,GO:0031090,GO:0031164,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031625,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032868,GO:0032869,GO:0032870,GO:0032940,GO:0032991,GO:0033036,GO:0033176,GO:0033177,GO:0033179,GO:0033181,GO:0033227,GO:0033365,GO:0033572,GO:0034220,GO:0034613,GO:0035577,GO:0035751,GO:0036230,GO:0036442,GO:0042119,GO:0042221,GO:0042582,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0043067,GO:0043068,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043434,GO:0043492,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044769,GO:0045055,GO:0045169,GO:0045184,GO:0045321,GO:0045335,GO:0045851,GO:0046903,GO:0046907,GO:0046916,GO:0046933,GO:0046961,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048609,GO:0048856,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051452,GO:0051453,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0051716,GO:0055065,GO:0055067,GO:0055070,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060142,GO:0065007,GO:0065008,GO:0070727,GO:0070820,GO:0070821,GO:0070838,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072511,GO:0072512,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0090662,GO:0090702,GO:0097708,GO:0098588,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099120,GO:0099131,GO:0099132,GO:0099503,GO:0101002,GO:0101003,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600 |
| EggNOG free text desc. | ATP hydrolysis coupled proton transport |
| EggNOG OGs | COG0636@1,KOG0232@2759 |
| EC | 2.7.11.11 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036 |
| Hectar predicted targeting category | signal anchor |
| Ec32 ortholog description | V-ATPase proteolipid subunit |
| Ec32 ortholog | Ec-15_000900.1 |
| Exons | 4 |
| Model size | 1552 |
| Cds size | 387 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815511.6213756-UTR-P-fluviatile_contig12:1740381..1740457 | 1622815511.6213756-UTR-P-fluviatile_contig12:1740381..1740457 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 1740382..1740457 + |
| 1693562092.7091253-UTR-P-fluviatile_contig12:1740381..1740457 | 1693562092.7091253-UTR-P-fluviatile_contig12:1740381..1740457 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 1740382..1740457 + |
| 1622815511.6363795-UTR-P-fluviatile_contig12:1742867..1742902 | 1622815511.6363795-UTR-P-fluviatile_contig12:1742867..1742902 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 1742868..1742902 + |
| 1693562092.7193124-UTR-P-fluviatile_contig12:1742867..1742902 | 1693562092.7193124-UTR-P-fluviatile_contig12:1742867..1742902 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 1742868..1742902 + |
| 1622815511.7063353-UTR-P-fluviatile_contig12:1745509..1746563 | 1622815511.7063353-UTR-P-fluviatile_contig12:1745509..1746563 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 1745510..1746563 + |
| 1693562092.7678897-UTR-P-fluviatile_contig12:1745509..1746563 | 1693562092.7678897-UTR-P-fluviatile_contig12:1745509..1746563 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 1745510..1746563 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815511.649237-CDS-P-fluviatile_contig12:1742902..1743026 | 1622815511.649237-CDS-P-fluviatile_contig12:1742902..1743026 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 1742903..1743026 + |
| 1693562092.7284617-CDS-P-fluviatile_contig12:1742902..1743026 | 1693562092.7284617-CDS-P-fluviatile_contig12:1742902..1743026 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 1742903..1743026 + |
| 1622815511.6620126-CDS-P-fluviatile_contig12:1744584..1744669 | 1622815511.6620126-CDS-P-fluviatile_contig12:1744584..1744669 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 1744585..1744669 + |
| 1693562092.747339-CDS-P-fluviatile_contig12:1744584..1744669 | 1693562092.747339-CDS-P-fluviatile_contig12:1744584..1744669 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 1744585..1744669 + |
| 1622815511.6946712-CDS-P-fluviatile_contig12:1745331..1745509 | 1622815511.6946712-CDS-P-fluviatile_contig12:1745331..1745509 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 1745332..1745509 + |
| 1693562092.7599647-CDS-P-fluviatile_contig12:1745331..1745509 | 1693562092.7599647-CDS-P-fluviatile_contig12:1745331..1745509 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 1745332..1745509 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1444.1 >prot_P-fluviatile_contig12.1444.1 ID=prot_P-fluviatile_contig12.1444.1|Name=mRNA_P-fluviatile_contig12.1444.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=129bp
MGIGAMGVMHPQLVMRNIIPVVMAGVLGIYGLIVSVILLGSITAPQNGVT VYSAYTSFAHLAAGISCGLSGLAAGMAIGVVGDAGVKAIGQQEKLFVGMI LILIFAEALGLYGLIVALILSQNTYTCD* back to topmRNA from alignment at P-fluviatile_contig12:1740382..1746563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig12.1444.1 ID=mRNA_P-fluviatile_contig12.1444.1|Name=mRNA_P-fluviatile_contig12.1444.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6182bp|location=Sequence derived from alignment at P-fluviatile_contig12:1740382..1746563+ (Porterinema fluviatile SAG_2381) ATTAGCGAGGACGGGTGCCCGGTTTGGGCACCCCTTGTCGGGTTCACTGG
GGTGCTATTCGCCTTGGTCTTCGCAAGTGAGTTCCAAGCAGGTTGAATGT
TTCGGGGTACGTTCAAAGTGTCGGGGCGCGTGGCATGCATCACGACGCCA
CAGGAAATCGTCGAAGGGGGAGGGGCGGGGGGGCGTATTCCCACACACAA
AAACTGTGTGCCTTGCTCCTCGTCACGCATGTTTGTTTGCGCGATGGTGT
GGTTGCCTACTGGAGGGGAAACAAGCGAGACTCCCGAAGATCGTCATGAG
ACTGCCTGTGCCCTTTCAATGAGCCCCGATCGTCTTTCTCGGGTCGTGGC
GAATTGGGAAAACAACGAGCTTTTGCAGCCCTCATCGCGCCGACTATACG
CAACGCGCAGTCGCCGGGCCAAGCTTGTGCAGCTTTCACGGCGATGTTTC
GATCCCGATACTTCTTTGGTCCCGTCCTATTTTGGTATGAAGCCCCCACC
TTCCAGGAACGAGTCCATTGCCCAAGAATTACAAGCCCAGTGCTGCTGTA
ATTAAAAAGAAATGACCGCGTCGCAGCAGCAAGGCTTGCCTCGCTCCGTC
GTTGGCGTTCACTTGTGCTCGTTGTCATTTTCCTTCTGGACGGAGATCAC
TTTCTCCTTCCAGGCCTCGTCGTAGCGTGGAGTAAGTTAGCTCTTCAGTG
CGGTTCGTACCCGCGCAGAGCGGTGCTCCCTGCAGGACAGTTGCGCTTTA
TACGTGTGGACGCCAGTTCCGACGCATCGCCTGTGCTTATGCTCTATTTT
GTGGTTGGCGAATCGCGGCAATGTCGTCCAGAGACCATAATCGGTGTGGA
TAGAAGCAAAGAGGATTACTCTTGACAAGCTCAGCCACCACAGCAGTATT
CGTGTCTGTGTAGGAACCCTAGGCCAAGCAGGTGTCCTCGCGTGCACACT
CTGCAGGGGCTGTAGACAAACGCGAAATGCATTTTAAGCGGTGATAAGAT
TGGCTGCTGCATGCCACTACGTCCATCCAGAGGTGAGGAATCATGAACCA
CAGCGGACAGAATCAGTTTCGCACCGTCTCTCTCGGGATGCCCAAAGGTT
ACTCATTCGAGGGGTCAGAAACGCACCCGCTGCACAACAAGCTTTCGCTT
TACTTGGCAAGCTGTTGGCAAACGCTCTTGAGCCGACCCTTTCGGCGATT
CGACGTCTCAGGGAGAAATCGATACAGCGCTATCTAGCATGCACCCGCAC
TTGGTCTCCGCGAGGACCTACCTTCAGCGTGCAGTGAAATGTTGGGGAGG
TTTGCACGGCGGAACCCAACTCCCTCTCCTTTTTATTGTTGTAGACCACC
CACCACTTGAAGCGATGTCGATGCACGGTGATGGAAGGATACACCAGCCG
GCGTGTTACCGAACGTGGCTGTGATGCCTCGATGAAATGTGTCGCGTACT
CGGGCAAGGGCTTTTTTTTTTTTTTTTTTTTTTTGGGGGGGCGGCGTGCG
CTTCGCATTACCGCGAACGGCGGTGTATACCATACTGCTGGAGGCGATTT
TTGGAGCGCCGAAGGGCTTCAGAAGGATGAGTGCCGGCGCCCAGATCGGC
GTTTTTTTAACGATTTGATTAAGGGCTTCCAAAACGTATGATTCGGCGTT
CCACGCTTGCTCCTTAGCACAGCGGTCGAGGTTTGAACGTCGAGTCAAGG
ACACCGTCTTAGACGGAAAGCAAAGCGGTGGGGTGCCCCCTCGGTACTTT
GTCGGTGTGTTGCCCGCCGATAAAGGACCCTTTTCAGGCCGCCTGCCCTA
CTCGTAATCGGGAAGCACGTGGGTTCGGTTGCATATATTTTTGTCTGTTT
GTGACAAAAGCGCTCTCCGAGCAGTGACACCCTTCCGGCCGAGACTGACT
GTTCGAGGCGGCCACGACTTGCTGTCCTACCGCTTTTGGTGTAGTCGAGA
TGCCGTCGCCTTGCGGTGGGATTTGGTGGACCTGTGAAACGGGTGAAGGC
CGGGCGACCGTCATCGGTTTCCTTCCCCTGCCTGGCTTTCTACTCTTGCG
GTAGTCGCGTTGGACATTCTGGCATCGATAGTCGCCGCCCGGTTCCGCAA
TGCTGCGCCGTGAACCAACTCGTTTGGGCTTTTTCTTGAATTCACATAAT
GTCTTCGCCTGCCTCAAAATCCTTGAAACACTGCCAACCCGAATTCTTGG
TTTTTCTGCCTTGCTGGCACAACTTCAAATCTACATCAAGATTAGGTCCG
GCTTGATGGCCCCACAGGCGCCGCCAGTCTGCCTTACCAACCCGACACTC
CCCGATAATACAAGCTTCCCCCCCTACCCCCGCCCTATTCCGTCCCCAGC
ACCCCTCTCACTCTCGAAAGAGATGTGCGCACAGCGACCAAACGGCCACG
GCAGCAACAACAATGCTCGCTCACCCTATCTGGCACCTCACCTGCTGCTG
CCTCACCGCGGCCCCCCATTTTCCTTCACCAACCAGACGGCGGCGCGGCA
TACGGTACGGCCAAGGCCGGGATGGGAATCGGAGCCATGGGGGTCATGCA
CCCGCAGCTGGTGATGCGGAACATCATCCCCGTGGTCATGGCAGGTGTTT
TGGGGATCTACGGGCTCATCGTGTCGGTCATCTTGCTCGGATCGAGTGAG
TATTGCGTCCCGCTCGACCGGCGTACGAAATGGGCTTCAGCAGTATTGGC
CACGATTTAAGAAAACCTTTGGTTAAGCCGAGCTAGGCTCTCTTGAATCG
GGCTTTCTCAGAGATCGAACTGAGAAGTCGTGCTGAATTTTAGGGGTTCG
TAGCATGCCGAACTGACCCTCTTAAGTCGGTACTTACTCTCCGGTACTTA
CCTTCAATCGTAGCCACGACTGCACCTAGAACCTACGCCGCGTTGTTCAC
CGCTGTTCGGCAATCCTTGCTTAGATGGAGGAATCCCCCCCCTCCGCGCT
TGTTGTACATTGTGCGGATTGTGCTACATGTGCGCCGCTTTTTTCATCAT
CTCTTCAAAGTGGCGTTGCACCTTAACTCGGTAGAGCGGACGACGTCGTC
TCGTTGGTTTTTCGCCTTATGCGCAAGGGGTTTTTCCGCTCGGGTCGATC
CGATCCACCAGAACGCACACTTTGCCGAGTGGGCCGAAGGCGTCCCTTGG
TTCACCAGTCGCTGCCGTTCCCTCTCCGGTCTGAGCGAGTCGTGTCATTT
TACCGTGTCATTTTACCGTTGTCGACAGAAAGAGGCACACCCGTGTGCTA
AAGTTTGGGGATAAGAGAATGTAACCCGTGGGGTGTGGTTCCGTGCAGTT
TCTAATCGGAACGGCCCAACCTGCTGAACAGGTTGTGCACAACGGTCTAA
GTGCGTCGTTTTGTTCGCTTATTTATCCCTTTGAGGGTTTTGTTCGACTT
TGAATTTGGGGGAGTAGGCGACCTCGCGCCGTTCGTTTCTCACCGGCTGT
TGAAACGGCCACCTTTTCTTTGGCCCGGCTGTATACTCTGCGGGGCGGAC
TGCGAGCGTCACCTCGTACACCGGCTGTAAGGGACCGGCTACGTTGCCCT
GATCCGTCGATGTGTTTGCCATCGTGCGGTGGGGCGGATGGCATCGCGTT
GACAACCCGTTACAGCGCGCTTGAAGCGGTCACCTGCGTGGTTGATTCAG
TACGTTACATATTCTGTGGGATGGACAATGCCATGTTTGTTCACTTTGCG
GTCGCGTCGCTCGGACCGAGCGCATGGTGGAATGTGCTGGAGCGTACCAC
ATGTCGCGTTGATCGCTCCATATCCATGCCGATGCGGCCCATCCGCGGGG
CGAGGGAGCATCGACACTCGCAGTACACCCGCAGGGACCTCCACGGTTCC
CGCCAGCGCGTGCGTTACCCCCCAGTATTCCCCAGAACACTGATCCTCCG
GCTGCCGAAGCAGACCGTCATGCCCGATCGTACTCACGCATGCCACCCAC
CTCCCCCTCCTTCTCCCCCTCTCCCAGGCGCTTGCCTCCGCTACCGCTTC
GGCCTGCTTCTCCGCCCTCTCTACCCGTTTGCTGTTTTCCCTGCTGCTGA
AGACATTGGTCGCACAAACTCGTACTCATCCccccgCCCCCCCCCCGGCC
CTTCTCCCACATTTTGGGCTTCTGCCGATTTTGGCCTCCTCCCCCCCCCC
CCTTGGCCTGTCTTTTTTCTCCGTTCTCTTGCCTGTGCTTCTTTGCGCTC
CAGTCACCGCCCCCCAGAACGGCGTTACCGTATACTCCGCGTACACGAGC
TTCGCACATCTCGCGGCAGGAATCTCGTGCGGGTTGAGGTGCGTCACAGG
AGGAGCACCGAATTCGCGACGCCGCAGTTGTATCCGGGGGGGGGCGAACA
GAGGGCAATACCCACCCATTTTCTGGACGAAAATAGTTTCTGCCAAACTT
ATCTCGACTCACCTTTGGTCGCCGACGGGGTGGGTATGCCCAATTTCTTC
GCTGCCCTGTTGTGACCGACGAAGCGGTGAGTGTACCCTTGTTTCTTGCG
TTTTCCTCATTTGGGTGCCGAATCTCGCTCGGCGTAATCAGGACTGCAAA
AGCATGTTGTGTTCGCGCGGCCACCGTAGGCCGATTTTCAAGAGCGCTAT
TGCTGCATTATCGAGCGGTCACCACCAATCCCGAACAGCCCGTCTCAGGA
ACGCTTTTGATGAAAACCTTCCGAAACTGTCCTTGAAGCCCCGGAGCTTG
TCCTTCTGTGAAGTTTTCGAGTTTCAAAAATCGCCCCGAGGGGTGTGGCG
TACACCGCTTCAGACGGTACCCTCGTCCGAGAAGAAAGGCATGCTGCTCG
CTTTTAGGTTCCGTCTAGCCCCCTTGCGGCGTGGGAGATGGTTTCCTTTC
GTCTAAATCGAATCACACCGACAGCGTTCCCCTCCCCTCCTCCCCCTTCC
CCCCTTCCTTCCCTCTCGTCCTGCACACGGAACGCCCCCGGAAACAACAG
CGGGCTTGCAGCGGGCATGGCGATCGGGGTAGTGGGCGACGCCGGCGTGA
AGGCGATCGGGCAGCAGGAGAAGCTCTTCGTCGGCATGATCCTGATCCTC
ATTTTCGCGGAGGCTCTCGGCCTCTACGGCCTCATCGTTGCGCTCATCCT
TTCGCAGAACACTTACACGTGTGACTAGTTTGATTTCCTTTGTTGTTAGT
TACTCCCTTGTTCCGCAGGAAACGAAATCTCGCCGCCTCATCCCGCAGAA
CACTTTTTGATTCACAGGCGATGCTAACTTGTGGCATTTGCTGTTTCGTT
GGCTAGAAGAGGAAAGCTCGCTTCTGAGGTGGACAACCTCCAACGAGTGA
GAGCGAGCAAGGTCGGCGGGCTGTTTTGATTGGCCCGTAACTACTGTACG
GTTACTTTCTGCCGGGTGCGGGGTCACCTATGCACGGCGGCGGACGTCTC
GATAGCAAACTGGAAATCAAAGCGCGTATTTTTTTCTTTCCAGGCGCGCT
GTAGCATGGCACTCGACACGTGCGTTCGCGCATTCGTTGTATCGAACGCG
CGCCGGCGGGGAACGCGATGCCCTGCTCCCAGTGGTCGGATTATCACGTC
CGACCATTTTTTTTTCATGAAAGTCAAATGGTCGGGGATGAAATCTCCGC
GTATTGGTTGCCCGCTGACGTGCAATAGAAAACGCAGGGGGCAAATTGTT
GCCGATTTTTGATTCGCCGAGTGTTGAGGTACGAATCCCACCTCTTGTGT
ACAAGCCGGGAATGGTTGGGTTGGCTCCTGTTTATACCCAGGGGGGGATC
GGGCTTTGGAAGCAGCGTCAGGGACATTTGTGAGTTTTCTCCGTTCTCTC
CGCGTTTGTATTTCACGCCAATGTCATGGCTCCGTTGCGGCAGCGGATTA
TGCCTTGAGCTCCCGCCACGCAGGACCTTTCGTTTCGACAGACGTGTTCC
AGTCCAAGGCTTTGGCTTCAAGCGCAGGAATCACAGCCCTGGTTGTATGC
ACTACAGGCGTGCGGTTGTATCATGTCGGAAGCGAGACTTTGCTCATTTC
ACGAGCGTAAAAAACAAACAAACGCCACAACAGGAAACCTGACCGACACG
TCGTCGGAACAAGAGGATTCGTCGCCACACCACCGCATCCACCACTGACC
ATCAGAGCGAGGGGGTGGAGCGGGAAGGGAAGGAGCGAGGGACACAAGAG
AGCGAGTGAGAGAGATATAGTCTAGTAGTGAC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig12:1740382..1746563+ >mRNA_P-fluviatile_contig12.1444.1 ID=mRNA_P-fluviatile_contig12.1444.1|Name=mRNA_P-fluviatile_contig12.1444.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=774bp|location=Sequence derived from alignment at P-fluviatile_contig12:1740382..1746563+ (Porterinema fluviatile SAG_2381) ATGGGAATCGGAGCCATGGGGGTCATGCACCCGCAGCTGGTGATGCGGAA CATCATCCCCGTGGTCATGGCAGGTGTTTTGGGGATCTACGGGCTCATCG TGTCGGTCATCTTGCTCGGATCGAATGGGAATCGGAGCCATGGGGGTCAT GCACCCGCAGCTGGTGATGCGGAACATCATCCCCGTGGTCATGGCAGGTG TTTTGGGGATCTACGGGCTCATCGTGTCGGTCATCTTGCTCGGATCGATC ACCGCCCCCCAGAACGGCGTTACCGTATACTCCGCGTACACGAGCTTCGC ACATCTCGCGGCAGGAATCTCGTGCGGGTTGAGTCACCGCCCCCCAGAAC GGCGTTACCGTATACTCCGCGTACACGAGCTTCGCACATCTCGCGGCAGG AATCTCGTGCGGGTTGAGCGGGCTTGCAGCGGGCATGGCGATCGGGGTAG TGGGCGACGCCGGCGTGAAGGCGATCGGGCAGCAGGAGAAGCTCTTCGTC GGCATGATCCTGATCCTCATTTTCGCGGAGGCTCTCGGCCTCTACGGCCT CATCGTTGCGCTCATCCTTTCGCAGAACACTTACACGTGTGACTAGCGGG CTTGCAGCGGGCATGGCGATCGGGGTAGTGGGCGACGCCGGCGTGAAGGC GATCGGGCAGCAGGAGAAGCTCTTCGTCGGCATGATCCTGATCCTCATTT TCGCGGAGGCTCTCGGCCTCTACGGCCTCATCGTTGCGCTCATCCTTTCG CAGAACACTTACACGTGTGACTAG back to top
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