mRNA_P-fluviatile_contig12.1439.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: D8LDE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDE9_ECTSI) HSP 1 Score: 176 bits (446), Expect = 6.960e-50 Identity = 82/140 (58.57%), Postives = 108/140 (77.14%), Query Frame = 2
Query: 314 IWALSLPLGTILIFVPLIVSKLLQLKSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFEGALKA 733
+WALSLP+GT+ +FVP I+S LQ+ SG ++NSSPREHA S++ A+KD HGY+RR YAAHQNSWEAMI+WS AVL A GV+ D M++ A VWLAAR +Y PAYILI + K++ R+F+F +G S+ LM++ ALKA
Sbjct: 5 LWALSLPVGTVFVFVPRIISLTLQIMSGAPLRNSSPREHAESKDVAAKDTHGYVRRAYAAHQNSWEAMILWSAAVLFAKSTGVDVDVMNNTAAVWLAARFVYTPAYILIRSNTKAFFRTFVFTIGTACSVRLMWQAALKA 144
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: D8LDF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF0_ECTSI) HSP 1 Score: 164 bits (415), Expect = 2.540e-45 Identity = 77/140 (55.00%), Postives = 103/140 (73.57%), Query Frame = 2
Query: 314 IWALSLPLGTILIFVPLIVSKLLQLKSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFEGALKA 733
+WALSLP GT+ +FVP ++S LQ+KSGV + N +PRE S++ A+KD HGY+RR YAAHQNSWEAMI+WS AVL A GV+ M+ A VWLAAR +Y PAY++I + K++ R+FIF +G S+ LM++ ALKA
Sbjct: 5 LWALSLPTGTVFVFVPRVISWALQVKSGVPLSNVNPREQVESKDVAAKDTHGYVRRAYAAHQNSWEAMILWSVAVLFAKSTGVDAGVMNKNAAVWLAARFVYTPAYVMIRSNTKAFFRTFIFMIGTSCSMRLMWQAALKA 144
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: A0A7U4Y8J6_9BURK (Uncharacterized protein n=4 Tax=pseudomallei group TaxID=111527 RepID=A0A7U4Y8J6_9BURK) HSP 1 Score: 71.2 bits (173), Expect = 2.200e-11 Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 2
Query: 389 KSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFEG 721
KSG N +PR++ E G+ R +AAHQNSWEA+ +++ A+++A G N R+D A V++A+RV+Y Y+L N + LRS ++ VGF + L F G
Sbjct: 23 KSGACYDNRAPRQYLAQLE-------GWRARAFAAHQNSWEALALFTGALVVAWHNGANVQRVDQLAIVFVASRVVYGVFYLL----NWAALRSLVWTVGFACVVWLFFVG 122
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: A0A6N2D3T7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D3T7_9DELT) HSP 1 Score: 63.9 bits (154), Expect = 1.030e-8 Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 2
Query: 314 IWALSLPLGTILIFVP--LIVSKLLQLKSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALM 712
+W++ L + +L+FVP ++V+ L++ K G + N +PR E G R AAHQN++EA+I+++ A L A V G + + AGV+LA+R +YI YI + RS ++ VGF+++LAL+
Sbjct: 7 LWSILLTI--VLVFVPRGVVVATLIRGKGG--LDNRNPRAQLARVE-------GRAARANAAHQNTFEALILFAPAALAAFVTGADPMVANALAGVFLASRAVYIALYI----GDVPTARSLVWGVGFLSTLALL 126
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: A0A2S5DEF9_9NEIS (Uncharacterized protein n=1 Tax=Chromobacterium sp. MWU14-2602 TaxID=2073169 RepID=A0A2S5DEF9_9NEIS) HSP 1 Score: 63.5 bits (153), Expect = 1.210e-8 Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 2
Query: 302 MPHAIWALSLPLGTILIFVPLIVSKLLQLKSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFE 718
MP +W+L L +PLI + + K+G + N PRE A E GY +R A QN+WEA+ VW+ AV+ A +M V M AGV++AARV + YI +++ LRS + +G + L L
Sbjct: 1 MPFVLWSLLLAA-----LLPLIWAGV--AKAGAKVDNHRPREFAARAE-------GYRQRAGWAQQNAWEALPVWTAAVVAAWMMKVPAAEMSAAAGVFIAARVAHGLLYIA----DQAALRSLSWLIGLLAGLYLFLR 121
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: A0A2N8R4Q1_BURTH (Uncharacterized protein n=13 Tax=Proteobacteria TaxID=1224 RepID=A0A2N8R4Q1_BURTH) HSP 1 Score: 63.2 bits (152), Expect = 1.500e-8 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 2
Query: 389 KSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMF 715
KS N PR + E G+ R +AAHQNSWEA+ +++ A+++A G N R+D A V++A+RVL+ Y+L N + LRS ++ VG V + L F
Sbjct: 23 KSSNRYDNREPRRYLGQLE-------GWRARAFAAHQNSWEALALFTAALVVAWHNGANVQRVDQLAIVFVASRVLHGVLYLL----NWATLRSLVWTVGLVCVVWLFF 120
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: A0A5S9N8S8_9GAMM (Uncharacterized protein n=1 Tax=Zhongshania aliphaticivorans TaxID=1470434 RepID=A0A5S9N8S8_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 4.290e-8 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 2
Query: 479 RGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFEGA 724
R YAA QN+WEA+ V++ AVL+A++ GV+ + A V++ ARVLY YI NK LRS +F VGF ++L A
Sbjct: 51 RAYAAQQNAWEALPVFTAAVLIAHLAGVDAAKSAIAAEVFIVARVLYPIFYI----TNKDALRSLMFMVGFGACISLFVMAA 128
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: Q2T3X7_BURTA (Probable transmembrane protein n=4 Tax=Burkholderia TaxID=32008 RepID=Q2T3X7_BURTA) HSP 1 Score: 61.6 bits (148), Expect = 5.190e-8 Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 389 KSGVAIKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMF 715
KS N PR + E G+ R +AAHQNSWEA+ +++ A+++A G N R+D A V++A+RVL+ Y+L N + LRS + VG V + L F
Sbjct: 23 KSSNRYDNREPRRYLGQLE-------GWRARAFAAHQNSWEALALFTAALVVAWHNGANVQRVDQLAIVFVASRVLHGVLYLL----NWATLRSLAWTVGLVCVVWLFF 120
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: A0A2S4HHG4_9GAMM (Uncharacterized protein n=2 Tax=Spongiibacteraceae TaxID=1706375 RepID=A0A2S4HHG4_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 1.480e-7 Identity = 41/107 (38.32%), Postives = 54/107 (50.47%), Query Frame = 2
Query: 404 IKNSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFEGA 724
I N PR E G R YAA QN+WEA+ V++ AVL+A++ GV+ + A V++ AR+LY YI NK LRS F VG +AL A
Sbjct: 33 IDNKHPRAQYAQLE-------GAGARAYAAQQNAWEALPVFTAAVLVAHLAGVDPSKSAIAAEVFIVARILYPVFYIA----NKDALRSLAFIVGLGACIALFIMAA 128
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Match: UPI000837DE83 (MAPEG family protein n=1 Tax=Vibrio tritonius TaxID=1435069 RepID=UPI000837DE83) HSP 1 Score: 59.3 bits (142), Expect = 3.840e-7 Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 2
Query: 410 NSSPREHATSQEFASKDAHGYMRRGYAAHQNSWEAMIVWSTAVLLANVMGVNWDRMDDYAGVWLAARVLYIPAYILIEDDNKSYLRSFIFAVGFVTSLALMFE 718
N PRE S + G+ R AAHQN++E++I+++TA+LLA G + + A + + +RV+Y Y++ +KS LRS ++ + F SLA+++E
Sbjct: 34 NHYPREQQASLK-------GFGARALAAHQNTFESLIIFATAILLAVTTGTTGEIVQLLAIIHIGSRVVYNILYLM----DKSSLRSLVWVISFGCSLAIIWE 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1439.1 >prot_P-fluviatile_contig12.1439.1 ID=prot_P-fluviatile_contig12.1439.1|Name=mRNA_P-fluviatile_contig12.1439.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=148bp MPHAIWALSLPLGTILIFVPLIVSKLLQLKSGVAIKNSSPREHATSQEFAback to top mRNA from alignment at P-fluviatile_contig12:1687507..1691957- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1439.1 ID=mRNA_P-fluviatile_contig12.1439.1|Name=mRNA_P-fluviatile_contig12.1439.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4451bp|location=Sequence derived from alignment at P-fluviatile_contig12:1687507..1691957- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:1687507..1691957- >mRNA_P-fluviatile_contig12.1439.1 ID=mRNA_P-fluviatile_contig12.1439.1|Name=mRNA_P-fluviatile_contig12.1439.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=888bp|location=Sequence derived from alignment at P-fluviatile_contig12:1687507..1691957- (Porterinema fluviatile SAG_2381)back to top |