mRNA_P-fluviatile_contig12.1432.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1432.1
Unique NamemRNA_P-fluviatile_contig12.1432.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: A0A6H5JEA3_9PHAE (GOLD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA3_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 4.490e-68
Identity = 119/202 (58.91%), Postives = 155/202 (76.73%), Query Frame = 1 
Query:  535 EGLYFYLTAKIPRQCLVLEGGKGSIFHVHYGFPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSHQFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            +G+YF++    PR+C V+    G+ FHVH+ FP A+DG ++ LELR L E+S+PK+RF  +P  ++ I  ++GSHQFK+K  +D  + LCAVT+S     GRGLKLYLDLD+G +D+ Y   ++ FNL D QI+MIQLKN AQQM+R+AD SKE ET YH+LLLQLN EVLWWPVSQV+IL+AMG+YQVR+LK FFKSKRLV
Sbjct:  115 DGMYFFVFPNGPRRCFVVSEAPGTSFHVHHYFPQAEDGHKVTLELRTLSEDSSPKDRFLQEPLVTRDIEDKRGSHQFKLKVAED--HLLCAVTSSETKKKGRGLKLYLDLDTGLEDKHYKDVQRRFNLGDAQITMIQLKNEAQQMLREADQSKESETEYHKLLLQLNHEVLWWPVSQVVILMAMGYYQVRHLKSFFKSKRLV 314
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: D8LDF7_ECTSI (Transmembrane emp24 protein transport domain containing 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF7_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 6.510e-42
Identity = 85/161 (52.80%), Postives = 118/161 (73.29%), Query Frame = 1 
Query:  535 EGLYFYLTAKIPRQCLVLEGGKGSIFHVHYGFPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSHQFKIKSNKDTTYSLCAVTASHPWG--RGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHR 1011
            EG+YF+++ K PR+C V+    G+ FHVH+ +P A+DG +I LELR L E+S+PK+RF  +P  ++ I  ++GSHQFKIK+ +D  + LCAVT+S      RGLKLYLDLD+G +D+ Y   ++ FNL D QI+MIQLKN AQQM+R+AD SK+ ET YH+
Sbjct:  103 EGMYFFVSPKGPRRCFVVSEAPGTTFHVHHYYPKAEDGHKITLELRTLSEDSSPKDRFVQEPLVTRDIEDKRGSHQFKIKTAED--HLLCAVTSSETKNKDRGLKLYLDLDTGLEDKHYKDVQRKFNLEDAQITMIQLKNEAQQMLREADLSKKSETEYHQ 261
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: UPI0012D39F19 (transmembrane emp24 domain-containing protein eca n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D39F19)

HSP 1 Score: 89.4 bits (220), Expect = 1.690e-16
Identity = 58/212 (27.36%), Postives = 107/212 (50.47%), Query Frame = 1 
Query:  538 GLYFYLTAKIPRQCLVLEGGKGSIFHVHY----------GFPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            GLYF+L A+  R+C + E    ++   HY          GF     G  + +E++               P + +I+S+   +  +F   S+    + +C  + +  W  G  L+++ D+  G+    Y +  +   L ++Q+ + QL N   Q+ ++ +Y +  E  + +     N+ VLWW ++QVI+LVAMGF+Q+R+LK FF++K+LV
Sbjct:   21 GLYFHL-AEGERKCFIEEVPSDTMVTTHYKIELYDTRSGGFAPPTLGIGMHVEVKD--------------PDDKEILSRVYSAEGKFPFTSHTPGEHVICLYSNTSQWFSGSQLRVHFDIQVGEHAVDYAQVAQKEKLTELQLRIRQLLNQVDQITKEQNYQRYREERFRQTSESTNKRVLWWSLAQVIVLVAMGFWQMRHLKTFFETKKLV 217
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: B7P6P0_IXOSC (Glycoprotein 25l, putative n=5 Tax=Ixodes TaxID=6944 RepID=B7P6P0_IXOSC)

HSP 1 Score: 88.2 bits (217), Expect = 4.410e-16
Identity = 59/211 (27.96%), Postives = 103/211 (48.82%), Query Frame = 1 
Query:  538 GLYFYLTA--------KIPRQCLVLEGGKGSIFHVHYG-FPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            GLYF+++         ++P + LV+   K  +F    G F  +  G  + +E+R               P +  I+SK   S  +F   S+    + +C  + S  W  G  L+++LD+  G+    Y    +   L ++Q+ + QL +  +Q+ ++ +Y +  E  +       N  VLWW V Q IIL+ MGF+Q+R+LK FF++K+LV
Sbjct:   23 GLYFHISETERKCFIEEVPEETLVVGNYKCQLFDPKTGGFMVSSPGIGMHVEIRD--------------PEDKTILSKVYSSEGRFSFTSHSPGEHIICLYSNSSKWFSGSQLRVHLDIQVGEHAVDYGSVAQKEKLTELQLRVRQLLDQVEQITKEQNYQRYREERFRLTSESTNSRVLWWSVGQTIILLLMGFWQMRHLKSFFEAKKLV 219
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: A0A293M004_ORNER (GOLD domain-containing protein (Fragment) n=3 Tax=Argasidae TaxID=6936 RepID=A0A293M004_ORNER)

HSP 1 Score: 87.8 bits (216), Expect = 5.860e-16
Identity = 58/211 (27.49%), Postives = 104/211 (49.29%), Query Frame = 1 
Query:  538 GLYFYLTA--------KIPRQCLVLEGGKGSIFHVHYG-FPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            GLYF+++         ++P + LV+   K  ++    G F  +  G  + +E+R               P +  I+SK   S  +F   S+    + +C  + S  W  G  L+++LD+  G+    Y    +   L ++Q+ + QL +  +Q+ ++ +Y +  E  + +     N  VLWW V Q +ILV MGF+Q+R+LK FF++K+LV
Sbjct:   22 GLYFHISETERKCFLEEVPEETLVVGNYKCQLYDPKTGGFMLSSPGIGMHVEIRD--------------PEDKTILSKVYSSEGRFTFTSHSPGEHMICLYSNSSKWFSGSQLRVHLDIQVGEHAIDYGSVAQKEKLTELQLRVRQLLDQVEQITKEQNYQRYREERFRQTSESTNSRVLWWSVVQTLILVVMGFWQMRHLKSFFEAKKLV 218
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: A2I436_MACHI (Putative transmembrane emp24 domain-containing protein 9 n=1 Tax=Maconellicoccus hirsutus TaxID=177089 RepID=A2I436_MACHI)

HSP 1 Score: 87.0 bits (214), Expect = 1.080e-15
Identity = 57/213 (26.76%), Postives = 106/213 (49.77%), Query Frame = 1 
Query:  535 EGLYFYLTAKIPRQCLVLEGGKGSIFHVHY----------GFPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            E LYF+++ +  R+C + E    +   VHY          GF  ++ G  + +E++               P E  I+S+   +  +    S+    ++LC  + S  W  G  L+++ D+  G+Q   Y +  +   L ++ + + QL+    Q++R+ +Y +  E  +       N+ V WW +SQV++LV MGF+Q+R+LK FF++K+LV
Sbjct:   21 ECLYFHIS-ETERKCFIEEIPDETTVLVHYKVELFDPRTNGFMPSQPGIGMHVEVKD--------------PEEKVILSRVYSAEGRLSFTSHAPGEHNLCLYSNSSKWVGGSQLRVHFDIQVGEQAIDYAQIAQQEKLPELNLRVKQLQGQVDQIMREQNYQRYREEKFRSTSESTNQRVFWWSISQVVVLVCMGFWQMRHLKSFFEAKKLV 218
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: G3MHG0_AMBMU (GOLD domain-containing protein (Fragment) n=11 Tax=Ixodidae TaxID=6939 RepID=G3MHG0_AMBMU)

HSP 1 Score: 85.5 bits (210), Expect = 7.080e-15
Identity = 58/211 (27.49%), Postives = 101/211 (47.87%), Query Frame = 1 
Query:  538 GLYFYL--------TAKIPRQCLVLEGGKGSIFHVHYG-FPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            GLYF++          ++P + LV+   K  +F    G F  +  G  + +E+R               P +  I+SK   S  +F   S+    + +C  + S  W  G  L+++LD+  G+    Y    +   L ++Q+ + QL +   Q+ ++ +Y +  E  + +     N  VLWW   Q IIL+ MGF+Q+R+LK FF++K+LV
Sbjct:   55 GLYFHIGETERKCFIEEVPEETLVVGNYKCQLFDPKTGGFMQSSPGIGMHVEIRD--------------PEDKTILSKVYSSDGRFSFTSHSPGEHVICLYSNSSSWFSGSQLRVHLDIQVGEHAVDYGSVARKEKLTELQLRVRQLLDQVDQITKEQNYQRFREERFRQTSESTNSRVLWWSAGQTIILLLMGFWQMRHLKSFFEAKKLV 251
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: A0A023G6Z2_AMBTT (Putative emp24/gp25l/p24 family of membrane trafficking (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023G6Z2_AMBTT)

HSP 1 Score: 85.5 bits (210), Expect = 7.080e-15
Identity = 58/211 (27.49%), Postives = 101/211 (47.87%), Query Frame = 1 
Query:  538 GLYFYL--------TAKIPRQCLVLEGGKGSIFHVHYG-FPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPW--GRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            GLYF++          ++P + LV+   K  +F    G F  +  G  + +E+R               P +  I+SK   S  +F   S+    + +C  + S  W  G  L+++LD+  G+    Y    +   L ++Q+ + QL +   Q+ ++ +Y +  E  + +     N  VLWW   Q IIL+ MGF+Q+R+LK FF++K+LV
Sbjct:   55 GLYFHIGETERKCFIEEVPEETLVVGNYKCQLFDPKTGGFMQSSPGIGMHVEIRD--------------PEDKTILSKVYSSDGRFSFTSHSPGEHVICLYSNSSSWFSGSQLRVHLDIQVGEHAVDYGSVARKEKLTELQLRVRQLLDQVDQITKEQNYQRFREERFRQTSESTNSRVLWWSAGQTIILLLMGFWQMRHLKSFFEAKKLV 251
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: A0A7R9KHB1_9ACAR (Hypothetical protein n=2 Tax=Oppiidae TaxID=229795 RepID=A0A7R9KHB1_9ACAR)

HSP 1 Score: 84.7 bits (208), Expect = 7.180e-15
Identity = 57/211 (27.01%), Postives = 106/211 (50.24%), Query Frame = 1 
Query:  541 LYFYLTA--------KIPRQCLVLEGGKGSIFHVHYG-FPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSHQ--FKIKSNKDTTYSLCAVTASHPWGRG--LKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            LYF+++         ++P + LV+   K  +F  + G F  +  G  + +E+R                 E KII  +  SH+  F   S+    + +C  + S  W  G  L+++LD+  G+    Y    +   L+++Q+ + QL +  +Q+ ++ +Y +  E  + +     N  VLWW + Q +IL++MGF+Q+R+LK FF++K+LV
Sbjct:   26 LYFHISETERKCFIEEVPDETLVVGNYKCQLFDPNTGGFMPSSPGIGMHVEIRD---------------PEDKIILSKVYSHEGRFSFTSHTPGEHVICLYSNSSRWFSGGQLRVHLDIQVGEHAIDYQNIAQKEKLSELQLRVRQLLDQVEQITKEQNYQRYREERFRQTSESTNSRVLWWSLGQTVILLSMGFWQMRHLKGFFEAKKLV 221
[Close]
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Match: A0A7M7LJH2_NASVI (GOLD domain-containing protein n=5 Tax=Chalcidoidea TaxID=7422 RepID=A0A7M7LJH2_NASVI)

HSP 1 Score: 84.0 bits (206), Expect = 1.220e-14
Identity = 58/212 (27.36%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  538 GLYFYLTAKIPRQCLVLEGGKGSIFHVHY----------GFPAAKDGEQIKLELRQLFENSTPKNRFSHKPTESKIISKEQGSH-QFKIKSNKDTTYSLCAVTASHPWGRG--LKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQQMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLKKFFKSKRLV 1134
            GLYF++  +  R+C + E    +   V+Y          GF  +  G  + +E+R               P +  ++S+   S  +    S+    + +C  + S  W  G  L+++LD+  G+    Y    +   L+D+Q+ + QL +   Q+ ++  Y +  E  + +     NR VLWW V+Q +ILVAMG +Q+R+LK FF++K+LV
Sbjct:   21 GLYFHI-GETERKCFIEEIPDETTVIVNYKVELYDPRSQGFMPSSPGIGMHVEVRD--------------PDDKVVLSRVYSSEGRISFTSHTPGEHIICLYSNSTAWFSGGQLRVHLDIQVGEHAIDYANVAQKEKLSDLQLRIKQLLDQVVQITKEQSYQRYREERFRQTSESTNRRVLWWSVTQTVILVAMGAWQMRHLKSFFEAKKLV 217
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEA3_9PHAE4.490e-6858.91GOLD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LDF7_ECTSI6.510e-4252.80Transmembrane emp24 protein transport domain conta... [more]
UPI0012D39F191.690e-1627.36transmembrane emp24 domain-containing protein eca ... [more]
B7P6P0_IXOSC4.410e-1627.96Glycoprotein 25l, putative n=5 Tax=Ixodes TaxID=69... [more]
A0A293M004_ORNER5.860e-1627.49GOLD domain-containing protein (Fragment) n=3 Tax=... [more]
A2I436_MACHI1.080e-1526.76Putative transmembrane emp24 domain-containing pro... [more]
G3MHG0_AMBMU7.080e-1527.49GOLD domain-containing protein (Fragment) n=11 Tax... [more]
A0A023G6Z2_AMBTT7.080e-1527.49Putative emp24/gp25l/p24 family of membrane traffi... [more]
A0A7R9KHB1_9ACAR7.180e-1527.01Hypothetical protein n=2 Tax=Oppiidae TaxID=229795... [more]
A0A7M7LJH2_NASVI1.220e-1427.36GOLD domain-containing protein n=5 Tax=Chalcidoide... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1597606..1604618 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score81.3
Seed ortholog evalue9e-13
Seed eggNOG ortholog7425.NV13790-PA
KEGG koko:K20346
KEGG TC9.B.188
GOsGO:0002790,GO:0003002,GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006888,GO:0006996,GO:0007030,GO:0007154,GO:0007267,GO:0007275,GO:0007389,GO:0007444,GO:0008104,GO:0008150,GO:0009306,GO:0009888,GO:0009953,GO:0009987,GO:0010256,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0023052,GO:0023061,GO:0031224,GO:0032501,GO:0032502,GO:0032940,GO:0033036,GO:0034389,GO:0035220,GO:0035295,GO:0042886,GO:0044425,GO:0045184,GO:0046662,GO:0046903,GO:0046907,GO:0048042,GO:0048193,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0050795,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051649,GO:0060429,GO:0061355,GO:0065007,GO:0071702,GO:0071705,GO:0071840,GO:0198738,GO:2000241
EggNOG free text desc.emp24/gp25L/p24 family/GOLD
EggNOG OGs38HEZ@33154,3BA85@33208,3CTI0@33213,3SGHH@50557,41UHX@6656,46F24@7399,KOG1690@1,KOG1690@2759
COG Functional cat.U
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04131
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionGOLD
Ec32 orthologEc-15_000790.1
Exons7
Model size2084
Cds size930
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815509.7069974-UTR-P-fluviatile_contig12:1597605..15978121622815509.7069974-UTR-P-fluviatile_contig12:1597605..1597812Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1597606..1597812 +
1693562087.4188695-UTR-P-fluviatile_contig12:1597605..15978121693562087.4188695-UTR-P-fluviatile_contig12:1597605..1597812Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1597606..1597812 +
1622815509.8026955-UTR-P-fluviatile_contig12:1603671..16046181622815509.8026955-UTR-P-fluviatile_contig12:1603671..1604618Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1603672..1604618 +
1693562087.5136387-UTR-P-fluviatile_contig12:1603671..16046181693562087.5136387-UTR-P-fluviatile_contig12:1603671..1604618Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1603672..1604618 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815509.7182982-CDS-P-fluviatile_contig12:1597812..15981691622815509.7182982-CDS-P-fluviatile_contig12:1597812..1598169Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1597813..1598169 +
1693562087.4317644-CDS-P-fluviatile_contig12:1597812..15981691693562087.4317644-CDS-P-fluviatile_contig12:1597812..1598169Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1597813..1598169 +
1622815509.7281935-CDS-P-fluviatile_contig12:1598967..15990571622815509.7281935-CDS-P-fluviatile_contig12:1598967..1599057Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1598968..1599057 +
1693562087.4459004-CDS-P-fluviatile_contig12:1598967..15990571693562087.4459004-CDS-P-fluviatile_contig12:1598967..1599057Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1598968..1599057 +
1622815509.738095-CDS-P-fluviatile_contig12:1600017..16001131622815509.738095-CDS-P-fluviatile_contig12:1600017..1600113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1600018..1600113 +
1693562087.4618657-CDS-P-fluviatile_contig12:1600017..16001131693562087.4618657-CDS-P-fluviatile_contig12:1600017..1600113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1600018..1600113 +
1622815509.7504122-CDS-P-fluviatile_contig12:1601043..16011331622815509.7504122-CDS-P-fluviatile_contig12:1601043..1601133Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1601044..1601133 +
1693562087.476128-CDS-P-fluviatile_contig12:1601043..16011331693562087.476128-CDS-P-fluviatile_contig12:1601043..1601133Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1601044..1601133 +
1622815509.7633662-CDS-P-fluviatile_contig12:1602106..16021991622815509.7633662-CDS-P-fluviatile_contig12:1602106..1602199Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1602107..1602199 +
1693562087.485826-CDS-P-fluviatile_contig12:1602106..16021991693562087.485826-CDS-P-fluviatile_contig12:1602106..1602199Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1602107..1602199 +
1622815509.7768369-CDS-P-fluviatile_contig12:1602805..16029311622815509.7768369-CDS-P-fluviatile_contig12:1602805..1602931Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1602806..1602931 +
1693562087.4949186-CDS-P-fluviatile_contig12:1602805..16029311693562087.4949186-CDS-P-fluviatile_contig12:1602805..1602931Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1602806..1602931 +
1622815509.7918856-CDS-P-fluviatile_contig12:1603593..16036711622815509.7918856-CDS-P-fluviatile_contig12:1603593..1603671Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1603594..1603671 +
1693562087.5040174-CDS-P-fluviatile_contig12:1603593..16036711693562087.5040174-CDS-P-fluviatile_contig12:1603593..1603671Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1603594..1603671 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1432.1prot_P-fluviatile_contig12.1432.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 1597813..1603671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1432.1

>prot_P-fluviatile_contig12.1432.1 ID=prot_P-fluviatile_contig12.1432.1|Name=mRNA_P-fluviatile_contig12.1432.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=310bp
MATANAPTTRRAMRTKLAAAAAAAGYNTPAPLATRGPRPPSAAPSRRLLV
FPAIFCALLPLLLLLLPEAVSSEGDTPLLSKHGRVKPPAAKPDAAARGPD
DEEAKRTQEEGLYFYLTAKIPRQCLVLEGGKGSIFHVHYGFPAAKDGEQI
KLELRQLFENSTPKNRFSHKPTESKIISKEQGSHQFKIKSNKDTTYSLCA
VTASHPWGRGLKLYLDLDSGKQDRAYDRDKKVFNLNDMQISMIQLKNTAQ
QMVRKADYSKELETAYHRLLLQLNREVLWWPVSQVIILVAMGFYQVRYLK
KFFKSKRLV*
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mRNA from alignment at P-fluviatile_contig12:1597606..1604618+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1432.1 ID=mRNA_P-fluviatile_contig12.1432.1|Name=mRNA_P-fluviatile_contig12.1432.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7013bp|location=Sequence derived from alignment at P-fluviatile_contig12:1597606..1604618+ (Porterinema fluviatile SAG_2381)
GAGAGAGAGAAAGCGCGCGCACGCGCGACGTGGCTTCGCGCCTAGCAGCA
GCAGGAGGAGGCAGTAGGAGAAGGATCGGGCGAGTCGAAACTCATACGGC
ACGCCTCGTCACGCGGGCGCGGGGAGTGCGCGAGTGTCCTGTTGACGTGC
GTGTGTACGAACTCGGCCGCGGCACCAGCACTACCTTCTCCTCTCTAGGT
TACCGTCATGGCGACCGCTAACGCTCCCACTACCCGGCGAGCAATGAGAA
CAAAGCTGGCAGCCGCAGCAGCGGCGGCTGGGTACAATACACCGGCGCCC
CTCGCGACGCGGGGCCCTCGCCCCCCCTCCGCCGCCCCCTCCCGCCGCCT
CCTGGTCTTCCCGGCCATCTTCTGTGCCCTCCTCCCCCTCCTGCTGCTCC
TCCTCCCGGAAGCCGTCTCCTCTGAGGGAGACACGCCGCTGCTCTCGAAG
CACGGGAGGGTGAAACCGCCGGCGGCGAAGCCGGATGCAGCGGCAAGGGG
ACCGGATGACGAAGAGGCGAAGAGGACGCAGGAGGAAGGGCTGTATTTCT
ACCTCACCGCAAAGGTGGGTGGTTCGGGGAGTGTGTGTAGGGTGGTGATT
GAGATGTCGACCGTGGGCGCGTAGGTGGGAGAGGGGGGGGGGATCAAGAG
CCGCGGGCTTGTTCTTTTGTGGGCGTATCAGAGAGGGAGGGAGGATCGGA
GAGAAGGGGCAAGAAAGGGAAGGTCAGAGGGAGCGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGA
AAGATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAG
AAGGAAACGAGTAGAAGAAGCGCACGAACGTCTCCTACCAGCAGATGTTC
GTGAATCGCATCGGGAGGTGGGGCCCAGATCCAAAGGAGACTGATTTCGC
TGAGGTTGCATTATGTTTAAGACAAGCGTGTCCCGCACACGCCCCCATTC
GTTTGTGCGAACACGGACGAAAGAAATTTACCGAGAACCTTCATTCTGGC
GACGAAAACCGGAGGTACAGCAAGAAAAAGAGTGGCTGATGGCGGGGGGT
GGGGAAAATCGAGCGACGGACCTTCACTGTACAATGCACACCCTCTCACC
GGATGTTTTGTGCTTTCAAGAGGGACTCCAAAGGCCGGCGTCACAAACAG
CAGATGAAGAAGATAAGAAAAAGAGGGAACAGAGGCAGAATCATTGATGT
GGACACATTTGATAGAGAACCTTCCTCCGGAGAAAGCAGGGGAGCAATCG
AACTTAAGAATGTACGTGGACACACTGTGCCAACGGAGTACCCATCGCCC
CTTATGCTGCAGATCCCCAGGCAATGCCTCGTGTTGGAAGGGGGGAAGGG
AAGCATATTCCACGTGCACTACGGCTTTCCGGCGGCCAAGGACGGCGAAC
AGGTGCGTTGTTGTTGTTCGCGTTCTTGTTCTTGTTGTAGTGGGGATTGT
GGAGGAAATGGTGGTGGTGTTGGTATTGTGTGTTGAGAATGGTGTCTTGG
TGATAGTGTTACTCTTGTGCTTGTTCTTGTTGTCAAGCCGCCCCTGTTGC
AAGTATTGCTACCGTCGCGTTTTCCGTTGCCATGTATTCTTTGTAATCCT
TAATGTTGGCGATAATTCCTCTCGATTTTGCCCCCGTCGCTGTTCGGGTT
TTTTTGTCGGTTATTGCGCGCGTCAGTGATGGATGCGGTGATGGAGTTTG
ATGTTGTTGGTGGTGATCCATGGGGGCGTTTTTTTTTTAATGATCTTTTC
GTTTTCTTGCTTCGTTCAACTTTTTCTTCTTTTCCTTCTTAGTGAGTTAA
TTCGCTGCATGCCGTCAAAAGTGGCTGTGCCGTTCGGATCTTGTACGCAG
CGCGAGATCTACGTTGTTTGACGACGGGCATAAATGCAAGGTAAAATGTC
TATGACTCCAGGGCCGTGCGTTGCTTCATCCCGGCAGCATTGTGGGGCGT
GCATGATGCATCACGAGTGGGTCACGCACGCACGCACGCACGCATGCACG
CACTCCTGGCGGAAACAACCCTGCCCCCTCCTCTCGATATTTTGTGCGCT
CTCTCTCCCCGTTGTGACTCGAACTCACAGCGGTGCCGCCGCCATCAGGG
TAGGGCCACGGTAGTCCGGCCGAGTTTCTTCCAAAGCATAGCACCCTCTT
CACCCCCAGCCCTCTTTGGCCACACGGCGACGGCATGCGTGAGGGGTACA
CCCCCCCCAGTCCGGCTTGTGATTTTTGAACCTCCTCGTCTGTACGGCCG
TCCGACGGCAGTCCCCCTCGGCGAGATCACTTGCTACGTGCACATCACTT
CTCACGTGTTTGGAACCCGTCCCCCTCGCCCGTTGACTCGGATGACTACA
TCGTGCCATCAGATCAAGCTGGAACTGCGACAATTGTTCGAAAACAGTAC
CCCGAAGAATCGATTCTCGCACAAACCCACCGAAAGCAAGATAATCAGCA
AAGAACAGGTGATTTCCTCTTCCATTTGCCGTTGTTGTTGGAGTAGTATA
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGT
TGTTGTTCTTGTTCTTGTTCTTGTTGTTCTTGATGTTGTTGCGCTTGTTG
TTGTGTTTATTGTTGTCGTTGTCGTTGTTGTTGTACTTTGCTTGCTGGTT
GTAATGATTGTTGGTGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGC
CATCGTTGTTATTGTCGCTGGTGGTGGTAGTTTTGGTGCTCGTGCTCGTG
CTGGCGGTCCTGCTTCTGGTGATGATTTGATTGTTAGTTATCTTGGGCGT
CCTACCAAACTACCTTTCGGTGCTTGGAGGGGATACACCACCGCTATGCT
GCATGAACAACTGATGCTCCCCTTGACATATATTTTCTGCAGTAGCTGTT
TTGCCGCGGAGGGGGTCTGCTAGATCGCTTCCCATTGTCAGCCAAATTCT
TTCCTTCGATACATCGCCGTACATTCCTGCATTTGTAGGTTTTGTGACAA
TTGTCTGCCGATGTGTTTGCTGTGCGTTTCTGCAATTGTATATGGTGATC
ATTCTCTGCTGTCTGAATTCTTTCGTAGGGATGGCGGACTCTGCGTCTCC
CTGGGTATTCCACTATACGGTGGAGGTCCCGTTTCGCGGCTCCCTTAGTG
TCAGGGAGGAATGTCGTCGCTAATCATGCCAAATTTCTAAACAGAAGTGG
GCTTATATAGCGGGTATGCAGCGGTGCTGCGTAATGAAGGGGTCGCGAAC
AAGGGCAGGTGGAAACCGCTTCAACCAGTGCGGTCCAAAACCAGCCATTT
TGTTTCGGGAATTTCTCTATGCCCCCCCTCCCTATCCATGAGTTCCTCAA
TATTTCGCCTCTCGCCTCGGAATCGCGTTTGAATACAGGGTTCCCACCAG
TTCAAGATCAAGAGCAACAAGGACACAACCTACTCGTTGTGCGCGGTGAC
TGCTTCACACCCTTGGGGTCGCGGCCTGGTGCGTTGATTGAGGTGGTTGA
GCAATGGGATCGGGTTAGAGTGTTAGAGTCAGGGCACGAAGAGAAGCAGA
AAGGGTCAGTTATCTTGACCCCGTGGCCGTAACCCTGACCTAAACCCATG
CCATGCCTAATTCCAAGCCGAAGGGTTGGGGCGTGGTGAATCGACTACGG
CAGTCGGATGCGGGGTTAGACTTAGGGGTGGGGGACGGTTTGGAGTTTGG
TCTGGCCGCGTCGCCCTTGTTCTCCTTTGTGGGTACTGGGCTACACTACC
GCTCAGGGCTCGGGTCAGGGCCAGAGGGTTTTTCTCCCTTGCCCTTACCG
TAATCGTGGCCCTCGCCCTGTCCTTGAACCCAAGCCTACTCCAAGCTCTA
ACTCTTGACATTGTCCTCAACCCCAGCGCTCTGCCCGGAATCCGGATACG
GGTGGCGCTGCACGTGTGCTGCATGACACCGTCGTAGTATTCTCAAGTCC
TATGCAGATCTTGGAAGCCTCTGTAGTCTCCCCACCGCTGGCTGGTGTAT
GGGTCCGGATCAACGGGGTCGGGATTGATGTTGGAGCCGGGTTTCCGAGT
GGAGGATTACGGCTGGGTTGGTGTTGGGTACAGCATAGCTTCACCGAACC
CTCACCTTAAGTCTTTACTTGAAGGCTTGGTTTGCATGTGTACGTTCTCC
GCACGCTGTTTGTCGTGTCTCTTCTGCCCAGAGGGGTGGAGGGGAGGTTC
ATGTACTCCTCCTCTATGGGGCCCCCTCTACGTTGCCGAAACGCTGGATT
ACCTGTCTTGGGCACGCAATGGGATGAATCGCTGACTCCACGGGGCCTTG
ATTCTCGCCTCCAGGGCTCTGCTACTCGGGGGCATTTTTTTTTCATTCCC
TCGGGGCGGATCGGGCTCCCGATTAAAGGTGGATTATATTTTTTCATTTA
GCATTCCGCTGACTAACCCCTCGACTCTCACACGGTTTTGTGGTCCTCTA
GAAGTTGTACTTGGATCTGGACTCCGGGAAGCAGGATAGGGCGTACGACA
GGGACAAGAAGGTGTTCAACCTCAACGACATGCAGATCTCGATGGTGAGT
TTGCATTCAGTTGGGTTGAGAGCGCGTGACCGCGCTCTCTAGCAGCCAAG
GCCCCCGAAAAATCTGCCTAGACTGATCATGCATTTTGTCGCTACGTCCT
CCGCTGGGGGGGCGCGCTTCCAAAACTAAGTGCACTTCCGAAAAAACGCC
GAAGACAAGCAACCTGTTTGTCGCTTTTGTGCCGCTGCCGTTGCGCTGGA
GAGCTCGCATCCCAATAAGCATGACTCTTTGCAAATGCTCACGAAACATT
GAAAACAAGACGAGATGCAAGACGCTTGTGGTCATTCATTTTACCGCTGC
CGCTGCCGCTACTCGCCGCCGTAGCCGGCTTGTGGCCTGCAGTGTCCCCG
TCGAAGTCTACCCGTCAAATGATCTTGACAGCCAAAAGTTCGGCCGCCCT
CGCTCCGTCTACATTCTCATGACCCCCCGTGCACCCCCCCCGCCCCACTC
CCCTCCCCCATGCCCTCCCTATCCCTAGTACCTCCTCTTCGCCGCCCCTG
CACCCCTGCCCCCCCATCTCCCCCTCTCCCCGCCCCCTTCCCTCTAATTC
TCCCTCCTCCGCCCACTATTTTCCTCCCACGCAATCTCGTCGCCCGACAG
ATCCAGCTCAAGAACACCGCCCAGCAGATGGTGCGCAAGGCCGACTACTC
CAAGGAGCTCGAGACAGCCTACCACAGGCTGCTGCTGCAGCTCAACCGCG
AGGTCTTGTGGTGGCCGGTGTCGCAGGTAAGTGGCTCACGAGCTGTAGTT
CAAAAGCCGGTGAGGCACGGTGTGCGTGTCCGTGCACGAATTTGCGTGTG
CGCGTGTGTGCGTGGTGGTTTCGTGTGCGTGTGCGTATGTGTATGCGTGT
GCTTTTGCGTGTGCGTCTCGGTGTCGGTGCGTAACAACAAGTGTGTGGGG
AAGGACAATTCGCGTTGTTTCGAGCTGTGACTGCGAACAACGGCCGGCCA
ATGAGAAGACTTCGGTCTCAGCCGGCAATATACGATCGCAGTGCGTGCGC
ACGTGTGCGTGAGCACGAGGGTCATAGTTCAACTTTTGCGTGGAGGCTTG
AGTAGTTTTTTTCGTTTCCTTTTGTGCCGTTCCGTTCCGATCCGATTCGT
TTCATTCCCTTCCGTTTCGTTATGTTTCGATTCGATTCATTGAGGTCCGT
TCCATTCCGTTCCGTTCCGTTTCGTTTCGTTTCGTTTCGTTCCGTTCCTT
TTCGTTTGATTCTGTTTGGTTCCGTTTCGATTCGATTAATTGAGATCCGT
TCCGTTCCTTTCCATTCCGTTTCGTTTCGTTCCGTTCCTTTTCGTTTGAT
TCTGTTTGGTTCCGTTTCGATTCGATTAATTGAGTTCCGTTCCGTTCCTT
TCCATTCCATTTCGTTCCGTTCCGTTTCGATTCGACAGGTGATAATCCTG
GTCGCGATGGGTTTCTACCAAGTGCGATACCTCAAGAAGTTCTTCAAGTC
TAAGCGGCTAGTGTAGAATTCCACCAAACCTTCTACGGAAGCAAATGAGG
ATGGCATCCCAACAAGGGAAGGAGCACCACTACAAGAAGCGTGCGTAGCC
TGTGCATTTTTCAGCGAGCAGGCGGCAGTAGCCGAACGATATTTGACGCT
TGGAGCGAGCGAAGGAGGCAGGGAGGGATAAGGGGAGACAGGCGGGCTCC
AATATATTCGTCGTTGGAGGTTTGTGTAGCCTCTGCTCTGCGCGGGCGTT
TGTGGTGTAGTTTTGCTCTCGGAGTTGGTTAATTTTATCTGTAGATTCCG
CGATTCGTTGTGGTACCCGGATCATCAGGGAAAGCAAGCGTTCGTCCCTC
TGCTTGTACTTTGCTGCCGCAAGCAGCAAAGGAACACGAAACAACAAAAA
ATTGGGTGAAGGCAACCTTGGCGTGAATTTACAGATAGACGTCACAATCC
AGCACCCTCTGTGTGGATGGTGATCCTTGTTTTCGAGAAAAAAATCCTAT
AGTGCGGGACAAAGTCCGCCGAGCGTACGCCAACATCTCTCTGTAGCCCC
ATCCCCCCAAAAAGCTAAGTGGCATGACAGCGGGCGGCGGCAGGATCCTG
CGGGTGTTCTGCAGGCAGATGCTTAGTTCCATTAGATTCCAAGGAGAAAG
AAAAGCAGAAGAGGTTCCACTCGGCGTGCGGAAGAGGAAAAGAGATACAT
CATACTTCGCACATTCGGATATGCACCACGCTATTTCATCCCTAGGTTGA
AACCAAGCCGCGTCGAAATGACCAGGTGATGCTTTCGGCGAAGTGTGGGT
GAAAAGACCCACATCACTGCATCGTACTGTGGCGGCTGGTCTGGCTTCAC
GGTGTATTCCCTTGGACGGGGGGGTTCGCCTAGAGAATCCCTCTCGCAGG
GACCATCACCTCTGCCGAGATAAGTCAACTCGGTGGTCGTAAAACAGAAA
ATCCGTGACGAAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:1597606..1604618+

>mRNA_P-fluviatile_contig12.1432.1 ID=mRNA_P-fluviatile_contig12.1432.1|Name=mRNA_P-fluviatile_contig12.1432.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1860bp|location=Sequence derived from alignment at P-fluviatile_contig12:1597606..1604618+ (Porterinema fluviatile SAG_2381)
ATGGCGACCGCTAACGCTCCCACTACCCGGCGAGCAATGAGAACAAAGCT
GGCAGCCGCAGCAGCGGCGGCTGGGTACAATACACCGGCGCCCCTCGCGA
CGCGGGGCCCTCGCCCCCCCTCCGCCGCCCCCTCCCGCCGCCTCCTGGTC
TTCCCGGCCATCTTCTGTGCCCTCCTCCCCCTCCTGCTGCTCCTCCTCCC
GGAAGCCGTCTCCTCTGAGGGAGACACGCCGCTGCTCTCGAAGCACGGGA
GGGTGAAACCGCCGGCGGCGAAGCCGGATGCAGCGGCAAGGGGACCGGAT
GACGAAGAGGCGAAGAGGACGCAGGAGGAAGGGCTGTATTTCTACCTCAC
CGCAAAGATGGCGACCGCTAACGCTCCCACTACCCGGCGAGCAATGAGAA
CAAAGCTGGCAGCCGCAGCAGCGGCGGCTGGGTACAATACACCGGCGCCC
CTCGCGACGCGGGGCCCTCGCCCCCCCTCCGCCGCCCCCTCCCGCCGCCT
CCTGGTCTTCCCGGCCATCTTCTGTGCCCTCCTCCCCCTCCTGCTGCTCC
TCCTCCCGGAAGCCGTCTCCTCTGAGGGAGACACGCCGCTGCTCTCGAAG
CACGGGAGGGTGAAACCGCCGGCGGCGAAGCCGGATGCAGCGGCAAGGGG
ACCGGATGACGAAGAGGCGAAGAGGACGCAGGAGGAAGGGCTGTATTTCT
ACCTCACCGCAAAGATCCCCAGGCAATGCCTCGTGTTGGAAGGGGGGAAG
GGAAGCATATTCCACGTGCACTACGGCTTTCCGGCGGCCAAGGACGGCGA
ACAGATCCCCAGGCAATGCCTCGTGTTGGAAGGGGGGAAGGGAAGCATAT
TCCACGTGCACTACGGCTTTCCGGCGGCCAAGGACGGCGAACAGATCAAG
CTGGAACTGCGACAATTGTTCGAAAACAGTACCCCGAAGAATCGATTCTC
GCACAAACCCACCGAAAGCAAGATAATCAGCAAAGAACAGATCAAGCTGG
AACTGCGACAATTGTTCGAAAACAGTACCCCGAAGAATCGATTCTCGCAC
AAACCCACCGAAAGCAAGATAATCAGCAAAGAACAGGGTTCCCACCAGTT
CAAGATCAAGAGCAACAAGGACACAACCTACTCGTTGTGCGCGGTGACTG
CTTCACACCCTTGGGGTCGCGGCCTGGGTTCCCACCAGTTCAAGATCAAG
AGCAACAAGGACACAACCTACTCGTTGTGCGCGGTGACTGCTTCACACCC
TTGGGGTCGCGGCCTGAAGTTGTACTTGGATCTGGACTCCGGGAAGCAGG
ATAGGGCGTACGACAGGGACAAGAAGGTGTTCAACCTCAACGACATGCAG
ATCTCGATGAAGTTGTACTTGGATCTGGACTCCGGGAAGCAGGATAGGGC
GTACGACAGGGACAAGAAGGTGTTCAACCTCAACGACATGCAGATCTCGA
TGATCCAGCTCAAGAACACCGCCCAGCAGATGGTGCGCAAGGCCGACTAC
TCCAAGGAGCTCGAGACAGCCTACCACAGGCTGCTGCTGCAGCTCAACCG
CGAGGTCTTGTGGTGGCCGGTGTCGCAGATCCAGCTCAAGAACACCGCCC
AGCAGATGGTGCGCAAGGCCGACTACTCCAAGGAGCTCGAGACAGCCTAC
CACAGGCTGCTGCTGCAGCTCAACCGCGAGGTCTTGTGGTGGCCGGTGTC
GCAGGTGATAATCCTGGTCGCGATGGGTTTCTACCAAGTGCGATACCTCA
AGAAGTTCTTCAAGTCTAAGCGGCTAGTGTAGGTGATAATCCTGGTCGCG
ATGGGTTTCTACCAAGTGCGATACCTCAAGAAGTTCTTCAAGTCTAAGCG
GCTAGTGTAG
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