mRNA_P-fluviatile_contig12.1427.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1427.1 vs. uniprot
Match: A0A6H5JCY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY4_9PHAE) HSP 1 Score: 624 bits (1608), Expect = 1.200e-193 Identity = 527/1044 (50.48%), Postives = 607/1044 (58.14%), Query Frame = 2
Query: 1052 FAAVPSKEAGAKMAGPSPLEWEASGEMVSTLAEWAQETGGGGGGARGRLPTVPVKVELVREGDWDAAGLKTTEPLPAAPPSGATGATXXXXXXXXXXXXXXXXNVAA---------MSGRRRVRIPPLQGIT---AACGKGKA-----------------PEAVLNAGGSVWDIDILLRQQQRXXXXAEGQERDGKSGGVGDGTSDGARTSKRGGSGSGPDLFLAVGTGPLRQTDDPIDEGEIFSGAIP--RSRPSPLPLLGKRTTGPGLLQVWRAKDAFSTL---EPPKSSTSSXXXXXXXXXXXXAXXXXXXXXVFAHP----------RKMGRPS---------AAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAAGGRDAEGGDSMFELAYGIAHDGGGVMKCRWAPDSVSLGGDEAGAAXXXXXXXXXXXXARNCSPGGRTVYACPDPDEVKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVLKTEPVLHVQLKRAELLCLDWSPREPDLLLAGASD----------------GTVCIWRVSAGGGVGVGTKARLNPPPHRQFACPAIGMFDVVGAAVYDVAWCPGSSRLFATTGAGHILTVWDTSEVFEPLCSVPSRTQRSAGTAVRWGPGGS-GIWITTTARPFLLFLDFYEGALREVLYRDHSHQKFGASGKRGAAVP-PPVLQDGRGVKDSAPLEDATWGLDVSREPESLNGAVMGQTTHLAAWTAPSGQVRVTAARCREMAEKEPHHHLAAAYVEQTAVKSRNTQRLQIMENRVMHRVEYVRPGDGSVDQGEPWSTTTXXXAGVASAAQQRVRNEEPVNRHGPVSADEARAGVSAAAAG--AEPYLRVFAGCESEGILAVKWHEAMPPLPGLLQCARFANIPPRHAQKLPFSKGKDKGKRPAAVPATAAAGGGTCVLVSGGHGGLVRCSVVPPHVTV-----QRVPSNSKHKFTAARKKQGAPRATGAKPPVAPAARKGKTGVAVAAMSIDPNSGKIVP 3949
F V + GA A SP W+ VS+ A+WA+ETGGGGGG RG LPT PVKVELV +G WDAAG+K XXXXXXXXXXXXXXXX + RRRV+IPPL+ T + G G+ PEAVLNA GSVWD+D LLRQ G G GTS +G DLFLAVGTGPLRQTD PI+E ++FS +P +P PLPL+GKRTTGP LLQ+WRAKD S L PPK T+ XXXXXXXXXXX XXXX A +K+GRP+ A A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GG SMFELAYGIAHDGGGV+KC+W PD + G E GA A G VY CPDPD V A XXXXXXXXXXXXXXX AVVLKT+P+LH +LK AE++CLDWSP+EPDLLLAGASD GTVCIW+VSA GG G N PP RQFAC AIGM DVV A V+DVAWCP S LFATTGAGHILTVWDTS+VFEPLCS+P +TQR +GT+VRWGPGG + T + L F GALREVLYRDH+ Q F A G RG A P V+Q+GRG++D PLEDAT+GLDV R+P + GQ+ HLAAWTAPSGQ+RV+AARCRE+A + HHHLAAA+ Q S+ +QRLQ++E+RVMHRVE G+PW T A+A + R + G V A ARAG + G A+PYLRVF G ESEG+LA+KWHEAMPPL GLL C R IPP+ +K P K A + G CVLVSGGHGGLVR SVVPPH+TV +R P K +KK+ P G+ V A+ +DP SGKIVP
Sbjct: 323 FGKVAACSQGAGEAKASPPAWKV---RVSSFADWAKETGGGGGGPRGCLPTAPVKVELVLQGAWDAAGIKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPRRRVQIPPLEVRTREVSVLGGGRRRGDEGDKGGGVPQEERPPEAVLNAAGSVWDVDTLLRQ------------------GGGGGTS------------AGLDLFLAVGTGPLRQTDHPIEEADVFSSGVPYIHGQPCPLPLIGKRTTGPALLQIWRAKDVCSVLTPSRPPKLRTAKTXXXXXXXXXXXXXXXXAKATAAAKDPAAKTNNIPVKKLGRPTKGAAEVMAVAKAKAAAAEKLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEEAIVGGGSMFELAYGIAHDGGGVVKCKWGPDGGAGGEGEGGALGLL---------AAVFQDGSLRVYVCPDPDGVTAEAASSLSNTTPGASAPXXXXXXXXXXXXXXXHG---AVVLKTKPILHARLKHAEVMCLDWSPQEPDLLLAGASDDTTXXXXXXXXXXXAKGTVCIWKVSALGGEHGGEGTTGNHPPMRQFACSAIGMCDVVQAVVHDVAWCPTSPNLFATTGAGHILTVWDTSDVFEPLCSIPVKTQRCSGTSVRWGPGGMMRNRLPTPISCWSLCFLFSSGALREVLYRDHATQSFSAKGPRGGAENLPAVVQEGRGIRDVVPLEDATYGLDVMRKPGQPDH---GQSIHLAAWTAPSGQIRVSAARCREVAPWQ-HHHLAAAFPGQCR-GSKKSQRLQLLEHRVMHRVE-----------GDPWCTAKVDRFNEAAA---QARTSWML---GAVGAG-ARAGPPSMGGGTAADPYLRVFTGAESEGLLAIKWHEAMPPLSGLLHCTRLVRIPPQ--EKAPSFK--------------AVSSPGACVLVSGGHGGLVRVSVVPPHLTVHASRGRRAPKRKKAVSGKGKKKKKNP------------------GLDVTAVKVDPKSGKIVP 1264
BLAST of mRNA_P-fluviatile_contig12.1427.1 vs. uniprot
Match: D8LDG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG0_ECTSI) HSP 1 Score: 591 bits (1524), Expect = 2.790e-178 Identity = 520/1165 (44.64%), Postives = 609/1165 (52.27%), Query Frame = 2
Query: 611 RTSKLTAEGYSATAFSHGGHRGAGRP---ARRPSDLVIASRNASVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVYVDLEPGARRTAEEEEEPGGEAR-GSGGCGGLGPDVDGGEDGGVGF------EGWAAAAANEDPVWRAVPGLMAFAAVPSKEAGAKMAGPSPLEWEASGEMVSTLAEWAQETGGGGGGARGRLPTVPVKVELVREGDWDAAGLKTTEPLPAAPPSGATGATXXXXXXXXXXXXXXXXNVA-----------AMSGRRRVRIPPLQGITAACGKGKAPEAVLNAGGSVWDIDILLRQQQRXXXXAEGQERDGKSGGVGDGTSDGARTSKRGGSGSGPDLFLAVGTGPLRQTDDPIDEGEIFSGAIP--RSRPSPLPLLGKRTTGPGLLQVWRAKDAFSTL---EPPKSSTSSXXXXXXXXXXXXAXXXXXXXXVFAHP----------RKMGRPS---AAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAAGGRDAEGGDSMFELAYGIAHDGGGVMKCRWAPDSVSLGGDEAGAAXXXXXXXXXXXXARNCSPGGRTVYACPDPDEVKA------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVLKTEPVLHVQLKRAELLCLDWSPREPDLLLAGASDGTVCIWRVSAGGGVGVGTKARLNPPPHRQFACPAIGMFDVVGAAVYDVAWCPGSSRLFATTGAGHILTVWDTSEVFEPLCSVPSRTQRSAGTAVRWGPGGSGIWITTTARPFLLFLDFYEGALREVLYRDHSHQKFGASGKRGAAVPPPVLQDGRGVKDSAPLEDATWGLDVSREPESLNGAVMGQTTHLAAWTAPSGQVRVTAARCREMAEKEPHHHLAAAYVEQTAVKSRNTQRLQIMENRVMHRVEYVRPGDGSVDQGEPWSTTTXXXAGVASAAQQRVRNEEPVNRHGPVSADEARAGVSAAAAG--AEPYLRVFAGCESEGILAVKWHEAMPPLPGLLQCARFANIPPRHAQKLPFSKGKDKGKRPAAVPATAAAGGGTCVLVSGGHGGLVRCSVVPPHVTV-----QRVPSNSKHKFTAARKKQGAPRATGAKPPVAPAARKGKTGVAVAAMSIDPNSGKIVP 3949
R S LTA GY AF++G + + A + SDLVI+ + A ++ +DLEPGA R + G+ R G GG G G D GG D EGW + WR + G + AA P GA A SP W+ VS+ A+WA+ETGGGGGGARG LPT PVKVELV +G WDAAG+K XXXXXXXXXXXXXXXX A+ RRRV+IPPL E ++FS +P +PSPLPL+GKRTTGP LLQ+WRAKD S L PPK T++ XXXXXXXXXX XXXX A +K+GRP+ AAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX GG SMFELAYGIAHDGGGV+KC+WAPD + GG + GA S G VY CPDPD V A + XXXXXXXX AVVLKT+P+L +LK AEL+CLDWSP+EPDLLLAGASDGTVCIW+VSA GG G N PP RQF+C AIGM DVV A V DVAWCP S LFATTGAGHILTVWDTS+VFEPLCS+P +TQR +GT VRWGPGGSGIW++ + RPF+ FLDF+EG GA P V+Q+GRGV+D PLEDAT+GLDV R+P + GQ+ HLAAWTAPSGQVRV+AARCRE+A + HHHLAAA++EQ KS+ +QRLQ++E+RVMHR+EYVRPGD VDQG+PW T A+AA + G V A ARAG + G A+PYLRVF G ESEG+LA+KWHEAMPPL GLL+ K P SK A + G CVLVSGGHGGLVR SVVPPH+TV +R P K +KK + + V A+ +DP SGKIVP
Sbjct: 659 RGSGLTAGGYGIAAFTNGSLKNMTKSTGSAVKTSDLVISGQGCKSAALAPSAAEGSKGKLASRLDHSQVRAATKKA-----RLAMDLEPGAWRRKGSKASANGKGREGEGGGGLAGKDRSGGADDADSSDVEPQEEGW------KQRSWREMAGFSSVAACPL---GAGEAKASPPLWK-----VSSFADWAKETGGGGGGARGCLPTAPVKVELVLQGAWDAAGIKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVPARRRVQIPPL-------------------------------------------------------------------------------------------EADVFSSGVPYNHGQPSPLPLVGKRTTGPALLQIWRAKDVCSVLTPSRPPKPGTATTPXXXXXXXXXXXXXXXAKATTAAKDPPPETDNMPVKKLGRPTKATAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERAAAEAAAKKXXXXXXXXXXXXXEAVVGGSSMFELAYGIAHDGGGVVKCKWAPDGSAGGGGDGGALGLPPA---------GVSGGSLPVYVCPDPDGVTAEAASSLSNTAPGSGASGGTAGAFAPPGSTPAAXXXXXXXXHGAVVLKTKPILQARLKHAELMCLDWSPQEPDLLLAGASDGTVCIWKVSALGGEHGGEGTTGNHPPFRQFSCSAIGMCDVVQAVVNDVAWCPTSPNLFATTGAGHILTVWDTSDVFEPLCSIPVKTQRCSGTTVRWGPGGSGIWVSASTRPFIFFLDFFEGG--------------------GAGNVPAVVQEGRGVRDVVPLEDATYGLDVMRKPGQPDH---GQSIHLAAWTAPSGQVRVSAARCREVAPLQ-HHHLAAAFLEQCR-KSKKSQRLQLLEHRVMHRLEYVRPGDRLVDQGDPWCTAEGDRVNDAAAAARTTW------MLGAVGAG-ARAGPPSMGGGTAADPYLRVFTGAESEGLLAIKWHEAMPPLSGLLE-------------KAPSSK--------------AVSSPGACVLVSGGHGGLVRVSVVPPHLTVHASRGRRAPKRKKAVSGKGKKK-----------------KINTPSLDVTAVKVDPKSGKIVP 1628
BLAST of mRNA_P-fluviatile_contig12.1427.1 vs. uniprot
Match: A0A3M6VKC8_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKC8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.640e-5 Identity = 47/144 (32.64%), Postives = 66/144 (45.83%), Query Frame = 2
Query: 2453 VVLKTEPVLHVQLKRAELLCLDWSPREPDLLLAGASDGTVCIWRVSAGGGVGVGTKARLNPP----PHRQFA-CPAIGMFDVVG-----AAVYDVAWCPGSSRLFATTGAGHILTVWDTSEVFEP-LCSVPSRTQRSAGTAVRW 2851
VV K ++ +L R L + WSP ++LL GASDG+V +W + K R P P R+F IG + A+ VAW P +FATTG + VWD V EP +C R + + G A++W
Sbjct: 336 VVEKDILIVVGKLPRIMQLSVQWSPHNWNMLLTGASDGSVSLWNIETAVKESRSLKIRHAQPAPIEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHIFATTGNDSVFKVWD---VREPRVCLRSHRIRSTWGLALQW 476 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1427.1 >prot_P-fluviatile_contig12.1427.1 ID=prot_P-fluviatile_contig12.1427.1|Name=mRNA_P-fluviatile_contig12.1427.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1271bp MRVPVAMAAAPAAAAGSGRPRRRLPLFLRPAPGAAAAAAAAAAPAARTAPback to top mRNA from alignment at P-fluviatile_contig12:1546053..1562238- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1427.1 ID=mRNA_P-fluviatile_contig12.1427.1|Name=mRNA_P-fluviatile_contig12.1427.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=16186bp|location=Sequence derived from alignment at P-fluviatile_contig12:1546053..1562238- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:1546053..1562238- >mRNA_P-fluviatile_contig12.1427.1 ID=mRNA_P-fluviatile_contig12.1427.1|Name=mRNA_P-fluviatile_contig12.1427.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7626bp|location=Sequence derived from alignment at P-fluviatile_contig12:1546053..1562238- (Porterinema fluviatile SAG_2381)back to top |