mRNA_P-fluviatile_contig12.1412.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A6H5KEC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC4_9PHAE) HSP 1 Score: 310 bits (793), Expect = 1.540e-91 Identity = 257/513 (50.10%), Postives = 300/513 (58.48%), Query Frame = 2
Query: 212 DMVYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSSKQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEKCTWSKKP-SCPLPAGWVPIHDALGGGPGRSRDGPPDGGDEENADPYPGGAAVSHRYNHRPAASGEKHIVRIDSYLDIDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFLSPTKSIPVPR-PPSR----TSKVFAADHRSYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSVGSSAVVRPAAGRLGKGEPPRGRGSFESAGPERAPWYENIWTGERVSRRPMYPAGPSDACVVSQVPRALHPLAFLAIPVKGEDIGGSGSGSRGRTGEKAVLEATVHRMSSSWSSFSSFKSRGYKAAAQCLSRCVD 1729
D VY LKF LVGS GVGKTRL + H + G S MQ TRT+RY+++ VRAQ+WDTAG K V +A+F GT GA+LVYDIS RSTFDDLARWL+LVRE+ H S+A+VLVGNKSDMS+ QREVSM+EGMRFARKHG+DF+E SAL HVEEACRQL++SVARYLPQ+K WSKK S PLP GW+PI G GG+EENA YP A++ R + + G K+ V D +D XXXXXXXXXXXXXXXXXXXXXXX +P ++ R PPS SK+F + XXXXXXXXXXXXXXXX RP P R WYEN WTGERVSRRP++PAGPS+ACVVSQV R L PL +L PVK + G G G G V + SSWS FSSFKSRGY AAA+CLS+C+D
Sbjct: 23 DRVYTLKFVLVGSRGVGKTRL-ASLFHRKKGGRPSAAVGMQFGTRTLRYSDSLSVRAQIWDTAGTLHFKCVKDAYFEGTVGALLVYDISNRSTFDDLARWLSLVRENSHKSVALVLVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKYVWSKKKRSHPLPLGWIPITADDWGNDVT-------GGNEENA--YP---AIAIRMD--GGSGGSKNAVS-DRETSVDTXXXXXXXXXXXXXXXXXXXXXXXXYRPSGTRLPYSG-----TPITTMDESRSPPSGGGRVASKIFGSSS------------------------IKPRGFCSSQNXXXXXXXXXXXXXXXXXXXXXXXXATRP-----------------NRVSPPRVLWYENAWTGERVSRRPLHPAGPSEACVVSQVSRTLAPLRYLPDPVKAKRRGLVFGGGEGEAGAAMVGDR------SSWS-FSSFKSRGYAAAAECLSKCLD 466
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: D8LDH8_ECTSI (Rab11C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH8_ECTSI) HSP 1 Score: 246 bits (628), Expect = 1.250e-71 Identity = 124/182 (68.13%), Postives = 146/182 (80.22%), Query Frame = 2
Query: 212 DMVYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSSKQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEKCTWSKK 754
D VY LKF LVGS GVGKTRL + H + +G S MQ TRT+RY+++ VRAQ+WDTAG F K V +AFF GT G MLVYDIS+RSTFDDLARWL+LVRE+ H S+A++LVGNKSDMS+ QREVSM+EGMRFARKHG+DF+E SAL HVEEACRQL++SVARYLPQ+KC WSKK
Sbjct: 23 DRVYTLKFVLVGSRGVGKTRL-ASLFHRKKSGCPSAAVGMQFGTRTLRYSDSLSVRAQIWDTAGTFAFKSVKDAFFGGTVGVMLVYDISKRSTFDDLARWLSLVRENSHKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKK 203
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A836CHB2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB2_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.870e-36 Identity = 77/177 (43.50%), Postives = 117/177 (66.10%), Query Frame = 2
Query: 221 YALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSSKQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEKCTWS 748
Y LKF LVG VGK++L R D+ + ++ M+ ATR + Y + ++AQ+WDTAG+ +T+A++RG GAMLVYD++ R++FD + RWL VR++ H +IA+ L+ NKSD++ + R V EG+ A HG+DF+E SA E+VE A R+L+++VAR LP+ K +S
Sbjct: 26 YVLKFVLVGDTNVGKSQLVLRFAQDQFSPEATKTVGMEFATRELAYYGGARLKAQIWDTAGQDRYSTLTQAYYRGAVGAMLVYDVTDRASFDAIKRWLKQVRDNAHRNIALSLIANKSDLAEEGRCVPTAEGLALAEAHGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRRYS 202
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A835YTB2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB2_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.550e-35 Identity = 79/175 (45.14%), Postives = 113/175 (64.57%), Query Frame = 2
Query: 218 VYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS-KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEK 736
VY LKF LVG VGK++L R + S M+ ATR + Y + ++AQVWDTAG+ +T+A++RG GA+LVYD++ R++F+ RWL +R++ H +IAV LVGNKSD QR V+ EG+ FA +G+DF+E SA E+VE A R+L+++VAR LP+ K
Sbjct: 17 VYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGK 191
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A2D4C264_PYTIN (Rab11 family GTPase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C264_PYTIN) HSP 1 Score: 142 bits (359), Expect = 2.690e-33 Identity = 79/198 (39.90%), Postives = 120/198 (60.61%), Query Frame = 2
Query: 203 PATDMVYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS--KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEKCTWSKKPS--CPLPAGW 781
P+ D Y LK L+G GVGK+ L R +R + + AT++IR + ++AQ+WD++G+ + +T A++R GAM+VYDI+ R+TF+ +WLA + EHCH S+ +LVGNK D++ R+VS +E RFA KHG++F+E SAL A +V +A ++++V V R L S P+ LPAGW
Sbjct: 83 PSGDPEYTLKVVLIGDSGVGKSNLVLRFAKNRFNAKSQQTVGFEFATKSIRVGDRR-LKAQLWDSSGQDRFQSLTAAYYRNAVGAMVVYDITNRATFESATKWLAQIHEHCHESLVTILVGNKCDLAHLPNSRQVSTLEAARFAAKHGMEFVETSALDATNVIDAFKKIIVPVGRLLSP-----SANPNNVVRLPAGW 274
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: W2HPP4_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2HPP4_PHYPR) HSP 1 Score: 142 bits (359), Expect = 3.070e-33 Identity = 91/247 (36.84%), Postives = 138/247 (55.87%), Query Frame = 2
Query: 53 RSPGAQPYSPAIQVFREKARWAWGEISTHAMVSARKPTARGRRSSISGTAPATDMVYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS--KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYL-PQEKCTWSKKPSCPLPAGW 781
RS + +SPA++ G S ++ + + R S ++P + + LK L+G GVGK+ L R +++ + + AT+TIR + +RAQ+WDTAG+ + +T A++R GAM+VYDI+ RS+F+ + WLA V EH H S+ ++LVGNK D++ + REVS +E RFA KH ++FLE SAL A +V +A ++L+V V R L P E K LP GW
Sbjct: 49 RSISSTQFSPAVK----------GSTSQASVTGSSMSASNSPRCSSPASSPMAESI--LKVVLIGDSGVGKSNLVMRFTKNKYMPQSVQTVGFEFATKTIRVGDRR-LRAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLETSALDATNVVDAFKKLIVPVGRLLSPTEP-----KKIARLPPGW 277
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: W2HQ38_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HQ38_PHYPR) HSP 1 Score: 139 bits (351), Expect = 4.310e-33 Identity = 81/189 (42.86%), Postives = 116/189 (61.38%), Query Frame = 2
Query: 227 LKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS--KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYL-PQEKCTWSKKPSCPLPAGW 781
LK L+G GVGK+ L R +++ + + AT+TIR + +RAQ+WDTAG+ + +T A++R GAM+VYDI+ RS+F+ + WLA V EH H S+ ++LVGNK D++ + REVS +E RFA KH ++FLE SAL A +V +A ++L+V V R L P E K LP GW
Sbjct: 6 LKVVLIGDSGVGKSNLVMRFTKNKYMPQSVQTVGFEFATKTIRVGDRR-LRAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLETSALDATNVVDAFKKLIVPVGRLLSPTEP-----KKIARLPPGW 188
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A485LCL1_9STRA (Aste57867_19095 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCL1_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.870e-33 Identity = 72/194 (37.11%), Postives = 119/194 (61.34%), Query Frame = 2
Query: 209 TDMVYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS--KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEKCTWSKKPSCPLPAGW 781
++ Y LK L+G GVGK+ L +R +++ ++ + A +TIR + ++AQ+WDTAG+ + +T A++R GA++VYDI+ R +F+ + WLA +REH H ++ ++LVGNK D++ R+VS +E RFA H ++F+EASAL + +V EA ++++V V R L + S + LP GW
Sbjct: 21 SEQEYILKVVLIGDSGVGKSNLVQRFTKNKYNEASTQTIGFEFAAKTIRVGDRR-IKAQIWDTAGQERFQSLTAAYYRNAVGALVVYDITNRHSFEHVTHWLAQIREHAHENVVLILVGNKCDLAHLPNTRQVSTLEAARFAETHHMEFVEASALDSTNVVEAFKRIIVPVGRLLTPMPPSSSTSQTQRLPPGW 213
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A024T8E4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024T8E4_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.040e-32 Identity = 77/213 (36.15%), Postives = 126/213 (59.15%), Query Frame = 2
Query: 161 PTARGRRSSISGTA--PATDMVYALKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS--KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYL-PQEKCTWSKKPSCPLPAGW 781
P G + S T+ P ++ Y LK L+G GVGK+ L +R +++ ++ + +TIR + ++AQ+WDTAG+ + +T A++R GA++VYDI+ R +F+ + WLA +REH H ++ ++LVGNK D++ R+VS +E RFA H ++F+EASAL + +V EA ++++V V R L P + + P LP GW
Sbjct: 7 PPLSGTATDASSTSSKPESEQEYILKVVLIGDSGVGKSNLVQRFTKNKYNEASTQTIGFEFTAKTIRVGDRR-IKAQIWDTAGQERFQSLTAAYYRNAVGALVVYDITDRHSFEHVTHWLAQIREHAHENVVLILVGNKCDLAHVPNTRQVSTLEAARFAETHHMEFVEASALDSTNVVEAFKRIIVPVGRLLTPPSSSSTGQTPR--LPPGW 216
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Match: A0A3F2S0R5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0R5_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.460e-32 Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 2
Query: 227 LKFTLVGSPGVGKTRLWERILHDRHAGGGSRRF-MQLATRTIRYAENSCVRAQVWDTAGEFPSKVVTEAFFRGTAGAMLVYDISRRSTFDDLARWLALVREHCHNSIAVVLVGNKSDMSS--KQREVSMMEGMRFARKHGLDFLEASALHAEHVEEACRQLVVSVARYLPQEKCTWSKKPSCPLPAGW 781
LK L+G GVGK+ L R +++ + + AT+TIR + ++AQ+WDTAG+ + +T A++R GAM+VYDI+ RS+F+ + WLA V EH H+S+ ++LVGNK D++ + REVS +E RFA KH ++FLEASAL + +V +A ++L+V V R L K LP GW
Sbjct: 108 LKVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVGDRR-LKAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHHSLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLEASALDSTNVVDAFKKLIVPVGRLLSPT----DPKKIARLPTGW 290 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1412.1 >prot_P-fluviatile_contig12.1412.1 ID=prot_P-fluviatile_contig12.1412.1|Name=mRNA_P-fluviatile_contig12.1412.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=531bp MVSARKPTARGRRSSISGTAPATDMVYALKFTLVGSPGVGKTRLWERILHback to top mRNA from alignment at P-fluviatile_contig12:1318899..1326536- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1412.1 ID=mRNA_P-fluviatile_contig12.1412.1|Name=mRNA_P-fluviatile_contig12.1412.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7638bp|location=Sequence derived from alignment at P-fluviatile_contig12:1318899..1326536- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:1318899..1326536- >mRNA_P-fluviatile_contig12.1412.1 ID=mRNA_P-fluviatile_contig12.1412.1|Name=mRNA_P-fluviatile_contig12.1412.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3186bp|location=Sequence derived from alignment at P-fluviatile_contig12:1318899..1326536- (Porterinema fluviatile SAG_2381)back to top |