mRNA_P-fluviatile_contig12.1401.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: D8LDL9_ECTSI (Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL9_ECTSI) HSP 1 Score: 470 bits (1210), Expect = 2.900e-155 Identity = 320/661 (48.41%), Postives = 388/661 (58.70%), Query Frame = 3
Query: 12 MVLELAGLPLEVLQS-ILAPFCRPRDLAYLLASSRGLRALRRGCVTALLEKLFKGRPGAVNALPWLRRRRLEHGRKNKPEGGGSDDXXXXXXXXXXXDGGVCPEDDVGILDWLYGLREGAETGAYRAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAA-EEAVASARAGYVGGDGXXXXXXXXXXXXXVQDGNAGDVWVTCAAAGKHCTVLGTRSGRVLLVGYIWSLWRGGGTGGCDCPRLAEFGRLPRGRGGGSXXXXXXXXXXXGREVGCWRIQCARSRNYFPAEA---VVAIDSAGHAHELSQVMGSIMAAVAADSLVNEPLRPPPKSKPIYAKCSSVLISPAARHTSLSRRGHRCRSWIEHG----DSGWQAGDAF--MAVPADGG---DDDEPWRWGXXXXGVLHASAWVENLAGRSHGLILVDGGASVVTHGNGRTGHLGHGTPCYEPTPKMVTTAVVLGRKVGVAPSREGTAGWARSAGVRVSIAPALPPPVAAAAGPDVDAGDGREAGWVGGLLSLVDAAADERD 1952
MV EL+GLPLEVLQ IL PF PRD+A+LLA+SRGLR+LRRG V+ +L+ LF+G+PGA NA+PW+R HG K DXXXXXXXX G DDV ++DWL GLR+ + TGAY A+LGE H+++VTPGGR L+AGSGRHGVLG+SG +NR+LFTEVDL WGRFPGR+PV AVACG +HTLILT VGTVHSCGLG+YGRLGHG+E SLSRPTLI+ LAG+RITQVAAG AHSVAVSW G A+TWGWG LG + D L+PTR+ D + AR G V +G+ VTCA AG+ CTVLGTR G VL G + ++ T C +EFGRL G + CWR+QC PA V+AID AG +++ G + + N + P S YA CSSV++SP S + RG + W+E G +SGW F + V DG D DE GV+HASA + N SHGL L DGG SV+T G+GRTGHLGHGTP +EP PK VTTAVVLG A RSA V VS+ +L G EAG+ G +L+LVDAAAD RD
Sbjct: 1 MVRELSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGKPGAGNAIPWIR---SHHGGK---------DXXXXXXXXNKLKGNGGSVDDVSVVDWLCGLRDTSATGAYSASLGETHSLLVTPGGRALSAGSGRHGVLGSSGRMNRFLFTEVDLGWGRFPGRIPVVAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIDSLAGERITQVAAGAAHSVAVSWSGKAFTWGWGYQGVLGRGGDDDVLKPTRVAIPLMDVSGGSNGGGDARGGGV----------------VAVEGH-----VTCATAGRSCTVLGTRHGVVLFSGLMSTM-----TSNHFCAVFSEFGRL-------------------GDGLRCWRVQC----ECLPATGTTLVMAIDPAGQVYDVEPRNGVALGGNNSSRYGNPSKQRVPLSAD-YAPCSSVILSP-----SDNERG---QCWLETGGEVEESGWGMDVCFGMVGVSRDGRLLFDSDEDDAGKDRSVGVVHASARIGNSCEVSHGLRLEDGGTSVLTWGDGRTGHLGHGTPAFEPKPKGVTTAVVLG----------SAASGVRSASVNVSVDDSLGGSSREVGGMHSSXXXXXEAGFRG-VLALVDAAADRRD 580
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A6H5L840_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L840_9PHAE) HSP 1 Score: 445 bits (1144), Expect = 1.870e-145 Identity = 304/666 (45.65%), Postives = 370/666 (55.56%), Query Frame = 3
Query: 21 ELAGLPLEVLQS-ILAPFCRPRDLAYLLASSRGLRALRRGCVTALLEKLFKGRPGAVNALPWLRRRRLEHGRKNKPEGGGSDDXXXXXXXXXXXDGGVCPEDDVGILDWLYGLREGAETGAYRAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEAVASARAGYVGGDGXXXXXXXXXXXXXVQDGNAGDVWVTCAAAGKHCTVLGTRSGRVLLVGYIWSLWRGGGTGGCDCPRLAEFGRLPRGRGGGSXXXXXXXXXXXGREVGCWRIQCARSRNYFPAEAVVAIDSAGHAHELSQVMGSIMAAVAADSLVNEPLRPPPKSKPIYAKCSSVLISPAARHTSLSRRGHRCRSWIEHG----DSGWQAGDAF--MAVPADGG---DDDEPWRWGXXXXGVLHASAWVENLAGRSHGLILVDGGASVVTHGNGRTGHLGHGTPCYEPTPKMVTTAVVLGRKVGVAPSREGTAGWARSAGVRVSIAPALPPPVAAAAGPDVDAGDGREAGWVGG-----LLSLVDAAADERDLEEDRAF 1973
+L+GLPLEVLQ IL PF PRD+A+LLA+SRGLR+LRRG V+ +L+ LF+GRPGA NA+PW+R HG K+K XXX +GG DDV ++DWL GLR+ + TGAYRA+LGE H+++VTPGGR L+AGSGRHGVLGASG +NR+LFTEVDL WGRFPGR+PVAAVACG +HTLILT VGTVHSCGLG+YGRLGHG E SLSRPTLIE LAG+RITQVAAGEAHSVAVSW G AYTWGWG LG + D L+PTR+ +A AR G V A + VTCA AG+ CTVLGTR G VL G+I ++ T C +EFGRL G + CWR+QC V AID AG +E+ G + ++ N + P S YA CSSV++SP R + W+E G + GW +F + V DG D DE GV+HASA + SHGL + DGG V+T G+GRTGH +VTTAVVLG A RSA V VS+ + G GG +L+LVDAAAD+RD +DRA
Sbjct: 6 QLSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGRPGAGNAIPWIR---SHHGGKDKXX---------XXXNKLKGNGGS--HDDVSLVDWLCGLRDMSATGAYRASLGETHSLLVTPGGRALSAGSGRHGVLGASGRMNRFLFTEVDLGWGRFPGRIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGSEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAYTWGWGYLGILGRGSDADVLKPTRVAIPLINAVGGSDGGDARGGGVA---------------------AVEGHVTCATAGRSCTVLGTRHGAVLFSGFITTM-----TSNRFCAVFSEFGRL-------------------GDGLRCWRVQC-ECLPVTDTTVVTAIDPAGQVYEVQPRNGVALGGNSSSRYGNPSEQRVPLSAN-YAPCSSVILSPFD--------DERGQCWLETGGEVEEPGWGMNLSFGMVGVSRDGRLLFDSDEDDAGKERSAGVVHASARIGGSCEVSHGLRMEDGGTCVLTWGDGRTGH-------------VVTTAVVLG----------SAASGVRSASVNVSVDDSF-------GGSSXXXXXXXXXXXXGGPRFRGVLALVDAAADKRDAADDRAL 572
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A7S4NS28_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NS28_GUITH) HSP 1 Score: 116 bits (291), Expect = 6.870e-26 Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 3
Query: 405 HTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVD--LEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEAVASARA 893
HTV VT G + T G G+ G LG + N R + T V +EWG +PVAA G HTL+L G V S G G+ GRLGHG++ PT + L +R +AAG AHSVA++ G YTWG G LGH + D + P +L I D AVA+ A
Sbjct: 17 HTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWG-----MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEA 176
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A7S4KS11_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KS11_GUITH) HSP 1 Score: 116 bits (291), Expect = 3.110e-24 Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 3
Query: 405 HTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVD--LEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEAVASARA 893
HTV VT G + T G G+ G LG + N R + T V +EWG +PVAA G HTL+L G V S G G+ GRLGHG++ PT + L +R +AAG AHSVA++ G YTWG G LGH + D + P +L I D AVA+ A
Sbjct: 219 HTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWG-----MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEA 378
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: L1J1U2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1U2_GUITC) HSP 1 Score: 116 bits (291), Expect = 9.600e-24 Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 3
Query: 405 HTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVD--LEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEAVASARA 893
HTV VT G + T G G+ G LG + N R + T V +EWG +PVAA G HTL+L G V S G G+ GRLGHG++ PT + L +R +AAG AHSVA++ G YTWG G LGH + D + P +L I D AVA+ A
Sbjct: 335 HTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWG-----MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEA 494
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: L1JF46_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JF46_GUITC) HSP 1 Score: 106 bits (264), Expect = 1.490e-21 Identity = 64/166 (38.55%), Postives = 84/166 (50.60%), Query Frame = 3
Query: 384 RAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTE--VDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEA 875
+ + G HT ++ G V T G G G LG +V + T V G+ V VACG HT L + G +++ G GEYGRLGHGDE+ + P L+E L G +T VAAG HS + G TWG G + LGH DE DR P + + + A E A
Sbjct: 43 QVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKH-----VKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVA 203
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A7S0VYN5_9CRYP (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VYN5_9CRYP) HSP 1 Score: 102 bits (253), Expect = 2.450e-20 Identity = 57/160 (35.62%), Postives = 81/160 (50.62%), Query Frame = 3
Query: 384 RAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAA 863
+ + G H+ V+ G + T G G G LG +V + T + G+ + V CG HT L E G + + G GEYGRLGHGDE+ + P L+E L G +T V+AG H+ + G +TWG G + LGH DE DR P + + + A
Sbjct: 45 QVSCGNQHSAVLLESGEIFTFGRGNFGQLGQGASVTANVSTPQIVS--ALQGKA-IKMVCCGWHHTAALLENGQLFTWGSGEYGRLGHGDEVRQASPKLVEGLQGKAVTYVSAGGFHTACIVDGGNLFTWGGGYFGQLGHGDETDRKAPKLVKGVSQSVA 201
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A2P6NTV0_9EUKA (S-layer protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTV0_9EUKA) HSP 1 Score: 107 bits (266), Expect = 2.520e-20 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 3
Query: 324 DVGILDWLYGLREGAETGAYRAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAG--DRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEAV-ASARAGYVGGD 911
D+ ++D+ + + E TG A G+NH++ +T GR+ + G H LG GN F +E FP + +ACG H+L LTE G V S G G YG+LG G RP IE ++ +A G HS+A++ DG YTWGWG + ALGH D+ + EPT L T +D + + A +R G D
Sbjct: 126 DLQLIDFPHNIFESI-TGC---AAGDNHSLALTSEGRLFSFG---HNDLGQLGNPEAQAFATTLVE---FPLSPKITRIACGLAHSLALTEDGKVFSWGWGGYGQLGDGHTEDRQRPVEIEVFKNLQKKVKAIACGGWHSMALTEDGQVYTWGWGEFGALGHGDKTAKNEPTLLDTFSKDKITIKTITAGSRHSLFGAD 314
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A7S0HGJ1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HGJ1_9CRYP) HSP 1 Score: 105 bits (263), Expect = 5.270e-20 Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = 3
Query: 384 RAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTE--VDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGGAYTWGWGLYRALGHEDELDRLEPTRLTTIPRDAAAEEA 875
+ + G HT ++ G V T G G G LG +V + T V G+ V +ACG HT L + G +++ G GEYGRLGHGDE+ + P L+E L G +T VAAG HS + G TWG G + LGH DE DR P + + + A E A
Sbjct: 43 QVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKH-----VKQIACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVEALQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKAPKMVKGVQQCIAHEVA 203
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Match: A0A0M0K9T2_9EUKA (Rcc1 repeat-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K9T2_9EUKA) HSP 1 Score: 105 bits (262), Expect = 1.180e-19 Identity = 61/153 (39.87%), Postives = 85/153 (55.56%), Query Frame = 3
Query: 384 RAALGENHTVVVTPGGRVLTAGSGRHGVLGASGNVNRYLFTEVDLEWGRFPGRVPVAAVACGNQHTLILTEVGTVHSCGLGEYGRLGHGDELSLSRPTLIERLAGDRITQVAAGEAHSVAVSWDGG-AYTWGWGLYRALGHEDELDRLEPTRL 839
R A G +H+ ++ GG VLT G+G +G LG N N Y V+ G+ +VACG++HT+ LT G+V++ G G GRLG GD + RP L+ L +AAGE+HS+A++ + YTWG G Y LGH D +L P L
Sbjct: 140 RVACGSDHSAAISEGGEVLTWGAGSYGNLGHGDNANVYSPKIVEALLGK-----ACISVACGSKHTIALTAAGSVYTWGYGGGGRLGSGDTRGMFRPKLVNDLKDQACLMIAAGESHSMAITAEKAQCYTWGVGDYGKLGHGDTTPQLLPRHL 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1401.1 >prot_P-fluviatile_contig12.1401.1 ID=prot_P-fluviatile_contig12.1401.1|Name=mRNA_P-fluviatile_contig12.1401.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=663bp MVLELAGLPLEVLQSILAPFCRPRDLAYLLASSRGLRALRRGCVTALLEKback to top mRNA from alignment at P-fluviatile_contig12:1190843..1208259+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1401.1 ID=mRNA_P-fluviatile_contig12.1401.1|Name=mRNA_P-fluviatile_contig12.1401.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=17417bp|location=Sequence derived from alignment at P-fluviatile_contig12:1190843..1208259+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:1190843..1208259+ >mRNA_P-fluviatile_contig12.1401.1 ID=mRNA_P-fluviatile_contig12.1401.1|Name=mRNA_P-fluviatile_contig12.1401.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3978bp|location=Sequence derived from alignment at P-fluviatile_contig12:1190843..1208259+ (Porterinema fluviatile SAG_2381)back to top |