mRNA_P-fluviatile_contig12.1382.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1382.1 vs. uniprot
Match: D8LDK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK1_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 1.960e-161 Identity = 536/1345 (39.85%), Postives = 652/1345 (48.48%), Query Frame = 3
Query: 1536 VGPISRFTALYFDEEMAEDEEEEGQGAVGG----------------EVVGSDGED--------GDDDSDSIGHSAASGFHSSGDGHQRQRHLSQQRPHTVRYSEWQRRRXXXXXXXXXGRRIEGEAELSSVVMETRRFVRQRRAAEQDALDRQHPPCFINGKGSPRTPKSGKKPPLVIELLPTCWRVRTVSTERQRYGDGHKKTANLQYCWASRQIMLDLDNGRFPLALMWALPEVLQEEGAVVAEIHDLRGTGADARDPAVATTLLQSFGEGVCPKGTHHPPGLGQGPGQGERFASDGSCISRCGGSSGTAANRSTSFDGXXXXXXXXXXXXXXXXXXXXTASTGGGSGGGDVGFSPGGVSVVQXXXXXXXSFSVQDKQSGLGDHRPLKIVVPTEAMTVAAAPR-------------LFPEKSSPDVVSALVAGAMHGRAGLPRTGLSPKGLSTTTPPTSASTTXXXXXXXXXXXXXXXVSSGA-ETNPSAAACGVGEGRAKGISLDKSPRDIESVTSSVGSMSFAPPLGSVTLVKPRVTRVRLKVNRGAWMASLWGEVLAAAKAHEVHWRSARRSAKGKQITGAPVDGGGAGGG-----------------------KRLLTGPTVGXX------GKRLKGKAAFAAAVPA---------GSESDDVNPWAKCLAGEGSPQETDAVAAGVPEGGPVAAAEALFERGAAMEAGLKAALGAEALLLRALVPTTDLCLYPSVNVSRLATIIRSECGGXXXXXXXXXXVDEDGDGAAPLLCRFDKRHYRVLETLALPGAENAPDEEQFFLGLGAKRLGKSTKRKLVETQAQITTAMRAGRPLQARPRPRAAAALPPVVPSTPSVSPVAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLETAEPSAFPAKPTAAAAAGTDSVSANPRDQTVHGGKIKAEASKASAVGAAASAGGDGRWPAA--GATKSPSKR-----------APGAAVTSGAV-----IVGGGGRSXXXXXXARSAEEMVASAVEGWIKG-----------------------PMAAAVGDSGGSKAAKHKGGKDRSAEIKRRAKKQ-AKEGPGGQPRGVATLSEMPKVVVGAKQEDLVADDVGRRDVS---SPAAXXXXXXXXXXXXXXXXXXXXXRSMTAVAAGAAGLEAXXXXXXXXXXXXDAALKSSKKLEE-KAFAFGVVQRTLLSPVTYVSPATGGRPYDRATFTRFAKPALEKARAIDRSNWNALAHELARASGAAAAA---SLKPGRLTVAEAEGHLRGGMLAVHLADEQRRQXXXXXXXXXXPPQ--EGRQ-HQRDRQAIKTDPDAMMNVRI 5186
+GPISRFTALYFDEE+ ++ + G G + G+D E G D G S+ASG + + LS R H R RRI+ EA+L VV TR+ V ++R A+Q+AL P CF+N KG+P+TPK K+PPLVIELLPTCWR+RT+STER R+GDGHKKTANLQYC+ASRQIMLDLDNGRFPLALMWALPEV+QE G V+AEIHDLRG DA +P+V TTLLQ FGEG+CPKGTHHPPGLGQGPGQGERFASDGS I+ SG XXXX A S G V Q QD S R L I+VP + + LFPEK SP VSA+ + A + R SP TPP +S G+ E P G+ LD S D ++ S ++ PP GSVTLVKPRV RVRLKV+RG WMAS+W V+ AA+ E SAKG A DGG G K ++ G T+G GK+ KGK AAA A G +D NPWA C A +E VA GV E P AAA+A+F RG A + ALGAEAL+L+ALVP+T++CL PSV+VSRLAT++R E D +G G L RF++ HYR+LETLALPG E+APDEEQFFLGLGAKRLGKSTKR +A + GR T+ + P+ + P T SA+ D GG A+ S++S A+ GG G A G+ R AP V+ G + XX RSA EM SAV GW KG P + A+ +S G+ K GK+RS E KRRAKKQ AKEGPG R +A S + K + + +D G + ++ +P A XXXXXXXXXXXXXXXXX X ++KS K+LEE +A AF V RTLLSPVT++SPA GGRP+D A FT+FAKPA+EKA+AIDR+NWN LA ELAR S AAAA S + GRLTVA E LR G+ HLA EQ XXXXXXXXX GR+ H D +AIKT PDAM+ +R+
Sbjct: 1 MGPISRFTALYFDEEIDPEDADSSSGGDNGHASFSGLSGGGRRAITDAAGNDSETVSPPVCGGGPADGRGRGLSSASGTGTPKSDRLGRYELSPSRHHHKR--------------ARLRRRIDHEADLLEVVKVTRQAVGEQREADQEALAGVEPACFMNAKGTPKTPKKEKRPPLVIELLPTCWRIRTISTERLRHGDGHKKTANLQYCFASRQIMLDLDNGRFPLALMWALPEVMQEAGTVIAEIHDLRGNALDAGNPSVGTTLLQPFGEGICPKGTHHPPGLGQGPGQGERFASDGSYIA-----SGANTXXXXXXXXXXXXSNSCAADGAADAVDVVDARDS----------SEGSVHQPQQLGRSDSPNRGQDGSSDRSSDRRLTIIVPGDKAGLRPXXXXXXXXXXXXXXXXLFPEKKSPKSVSAVFSAASIATSAPKR---SP------TPP------------------LLLLSPGSVEEKPGV-----------GVGLDDSAADGDAGEPSPVRVAPPPPPGSVTLVKPRVKRVRLKVSRGVWMASVWEAVVEAARRAE--------SAKGAVAAAAHGDGGTHGEDEGTRXXXXXXXXXXXXXXXXKRPKAVVGGKTIGVKHLAAGGGKQPKGKTVAAAAXXAASPLADKLSGQGNDGNNPWAACTA-----KEDAKVAGGVAESSPAAAAQAIFGRGPATDV----ALGAEALILQALVPSTEICLEPSVDVSRLATMVRGE---------GTARADGEG-GGGNLTFRFERHHYRLLETLALPGVEDAPDEEQFFLGLGAKRLGKSTKRSATGDRAAKSPGAGGGR---------------------------------------------------------SGVTNYPDETHPNGHTSNPNGMMRMNTPEASASSGDGGWGGGLGLADRSQSSI----AATGGVGATSTAVVGSXXXXXXRRMKGXXSVLLGAPRQQVSQGGLEXXXXXXXXXXXXXXARSGVRSAAEMAVSAVLGWEKGLNAAXXXXXXXXXXXXXKKVVPLPTSKALNNSVGT----DKSGKERSDEAKRRAKKQQAKEGPGHPKRMIADGSA---AALSTKAAEALIND-GMKGLAVHPTPQAPREDXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XRKTSVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHDPAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDSNQTGRLTVAATEERLRRGLQPAHLAGEQXXXXXXXXXXXXQQDSLVAGREVHDGDAKAIKTSPDAMITLRV 1165
BLAST of mRNA_P-fluviatile_contig12.1382.1 vs. uniprot
Match: A0A6H5KXS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS5_9PHAE) HSP 1 Score: 464 bits (1193), Expect = 3.250e-130 Identity = 537/1455 (36.91%), Postives = 672/1455 (46.19%), Query Frame = 3
Query: 1524 AAFVVGPISRFTALYFDEEM----------AEDEEEEGQGAVGG------EVVGSDGED------GDDDSDSIGHSAASGFHSSGDGHQRQRHLSQQRPHTVRYSEWQRRRXXXXXXXXXGRRIEGEAELSSVVMETRRFVRQRRAAEQDALDRQHPPCFINGKGSPRTPKSGKKPPLVIELLPTCWRVRTVSTERQRYGDGHKKTANLQYCWASRQIMLDLDNGRFPLALMWALPEVLQEEGAVVAEIHDLRGTGADARDPAVATTLLQSFGEGVCPKGTHHPPGLGQGPGQGERFASDGSCISRCGGSSGTAANRSTSFDGXXXXXXXXXXXXXXXXXXXXTASTGGGSGGGDVGFSPGGVSVVQXXXXXXXSFSVQDKQSGLGDHRPLKIVVPTEAMTVAAAPR------------LFPEKSSPDVVSALVAGAMHGRAGLPRTGLSPKGLSTTTPPTSASTTXXXXXXXXXXXXXXXVSSGA-ETNPSAAACGVGEGRAKGISLDKSPRDIESVTSSVGSMSFAPPLGSVTLVKPRVTRVRLKVNRGAWMASLWGEVLAAAKAHEVHWRSARRSAKGKQITGAPVDGGGA------------GGGKR---LLTGPTVGXX------GKRLKGKAAFAA----AVP-----AGSESDDVNPWAKCLAGEGSPQETDAVAAGVPEGGPVAAAEALFERGAAMEAGLKAALGAEALLLRALVPTTDLCLYPSVNVSRLATIIRSECGGXXXXXXXXXXVDEDGDGAAPLLCRFDKRHYRVLETLALPGAENAPDEEQFFLGLGAKRLGKSTKRKLVETQAQITTAMRAGRPLQARPRPRAAAALPPVVPSTPSVSPVAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLETAEPSAFPAKPTAAAAA-----------------GTDSVSANPRDQTVHGGKIKAEASKASAVGAAASAGGDGRWPAAGATKSPSKRAPGAAVTSGAVIVGGGGRSXXXXXXARSAEEMVASAVEGWIKGPMAAAV-------------------GDSGGSKAAKHKGGKDRSAEIKRRAKKQAKEGP---------------------------GGQPRGVATLSEMPKVVVGAKQEDLVADDVGRRDV-----------SSPAAXXXXXXXXXXXXXXXXXXXXXRSMTAVAAGAAGLEAXXXXXXXXXXXXDAALKSSKKLEE-KAFAFGVVQRTLLSPVTYVSPATGGRPYDRATFTRFAKPALEKARAIDRSNWNALAHELARASGAAAAAS---LKPGRLTVAEAEGHLRGGMLAVHLADEQRRQXXXXXXXXXX--PPQEGRQ-HQRDRQAIKTDPDAMMNVRIPIQQXXXXXXXXXXXXXXXXXXXXXXXXXXXSIFSSDGGQAFLSLQQSVGAPTEGVRRDDLDGNGCGGSLRTAPRSPANAPASPARKA 5450
++FV+GPISRFTALYFDEE+ +DE G G + G++ E G +D G SG SG G + LS+ R+ + R RRI+ +A+L VV TR+ V ++R A+Q+AL P CF+N KG+P+TPK KKPPLVI+LLPTCWR+RT+STER R+GDGHKKT NLQYC++SRQIMLDLDNGRFPLALMWALPEV+QE G V+AEIHDLRG DA +P+V TTLLQ FGEG+CPKGTHHPPGLGQGPGQGERFASDGS I+ + TAA S S G V Q QD S R L I+VP + + + P+ LFPEK SP VSA+ + A + R SP TPP +S G+ E P GVG G L S D ++ S ++ PP GSVTLVKPRV RVRLKV+RG WMAS+W V+ AA+ E +A +A+G T G GKR ++ G T+G GK+ GK A A P +G ++ NPWA C A E VA GV E P AAA+A+F RG A + ALGAEAL+L+ALVP+TDLCL PSV+VSRLA ++R E GG L RF++RHYR+LETLALPG E+AP + G GA + T ++ T RAA + XXXXXXXXXXXXXXXXXXXXXXX L S+ A AA+ G + PR Q GG +++ + A+ VGAA S RSA E+ SAV GW KG A+ + + A K GK++S E KR+AKKQ +G P +TL P + K +R + S+ A X XXXXXXXXXXXX ++KS K+LEE +A AF V RTLLSPVT++SPA GGRP+D A FT+FAKPA+EKA+AIDR+NWN LA ELAR S AAAA+ + GRLTVA E LR G+ +LA EQ++QXXXXXXXXX P GR+ H D +AIKT PDAM+ +R+ S+ GQ+ L LQ S+ P EG + G+GC A R+PA+ A+ +R A
Sbjct: 152 SSFVMGPISRFTALYFDEEIDPGAADSSSGGDDEHASFSGLSSGGRRGIADAAGNESETVSPPVFGGGPADGRGRDLCSG---SGTGTPKSDPLSRCELPPSRHHHKRAR---------LQRRIDCQADLLEVVKATRQAVGEQREADQEALAGVEPACFMNAKGTPKTPKKEKKPPLVIDLLPTCWRIRTISTERLRHGDGHKKTGNLQYCFSSRQIMLDLDNGRFPLALMWALPEVMQEAGTVIAEIHDLRGNALDAGNPSVGTTLLQPFGEGICPKGTHHPPGLGQGPGQGERFASDGSYITS---GANTAAXXXXXXXXSGSNSCAANGTADAADVVDARNS------------SEGSVHQPQQLGRGDSPNRGQDGSSDRSSDRRLTIIVPGDKVGLRPLPQPPLQTTPGSGHHLFPEKKSPKSVSAVFSAASIATSAPIR---SP------TPP------------------LLLLSPGSVEEKP-----GVGSG------LGYSAADGDAGELSSVRVAPRPPPGSVTLVKPRVKRVRLKVSRGVWMASVWESVVEAARRAESAKGAAAAAARGDDGTHGKXXXXXXXXXXXXXXXXXNGKGKRPKAVVGGKTIGVKHLAAGGGKQPTGKTVAAXXXXXASPLADKLSGQGNNGNNPWATCTA-----IEDGKVAGGVVESTPAAAAQAIFGRGPATDV----ALGAEALILQALVPSTDLCLEPSVDVSRLAAMVRGEGGGGN------------------LTFRFERRHYRLLETLALPGVEDAPSQAASASG-GASPSSRPTAAPASAGRSSATGD-------------RAAKSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGWGGGLGLPDRSQSSIAATGGVGAASTAXXXXXXXXXXRRMKGGGSVLLCAPRQQVSQGG-LESAVAAAAGVGAARSG-------------------------------------------VRSAAELAVSAVRGWEKGLNASTAXXXXXXXXXXXKKAVSPRTSQALNNLVATDKNGKEKSDEAKRKAKKQQPKGKLEGTDASFGYGVCHPAWGRINPSTCRWRSPPVESSTLHVYPIPLDALKPSFTEGPGHAKRMIADGSTAALSTKSAEALINDGMKGLVVHRTPQAQREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHDPAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDGKQTGRLTVAATEERLRRGLQPAYLAGEQQQQXXXXXXXXXQQDPLVTGREVHDGDAKAIKTSPDAMITLRVSTASPSNDQLPRPPVPSPSHQQEPQRLPLHRQQCGSNDGQSPL-LQTSIELPQEGFYQIG-GGSGCNLGQHIASRNPASPIAASSRPA 1454 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1382.1 >prot_P-fluviatile_contig12.1382.1 ID=prot_P-fluviatile_contig12.1382.1|Name=mRNA_P-fluviatile_contig12.1382.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=2053bp MEVTPEGQVATVAAAGLSAAVSTAGVADYTAGDAAAVAATGGGGGGGTGEback to top mRNA from alignment at P-fluviatile_contig12:953638..972951+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1382.1 ID=mRNA_P-fluviatile_contig12.1382.1|Name=mRNA_P-fluviatile_contig12.1382.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=19314bp|location=Sequence derived from alignment at P-fluviatile_contig12:953638..972951+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:953638..972951+ >mRNA_P-fluviatile_contig12.1382.1 ID=mRNA_P-fluviatile_contig12.1382.1|Name=mRNA_P-fluviatile_contig12.1382.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=12318bp|location=Sequence derived from alignment at P-fluviatile_contig12:953638..972951+ (Porterinema fluviatile SAG_2381)back to top |