mRNA_P-fluviatile_contig12.1379.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1379.1 vs. uniprot
Match: A0A6H5JIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA0_9PHAE) HSP 1 Score: 389 bits (1000), Expect = 1.610e-114 Identity = 411/1093 (37.60%), Postives = 517/1093 (47.30%), Query Frame = 3
Query: 24 MAEEVNTSHLDLFNGNDDVLNKSWDVESRYRLQEKALRLGKAFFTEESARFQVQVELGLHELTAALTSLSRRVDKLEESTAPTDGAEQDQAMKDLARSARCLSQALPGIASARTRRRALHGYFRESDGQRGSESGGRIDPATRALVVEGLSCLAGKVRADTACGSNIAGGDMGSSLGRSGASWGMSHTFPRRRKSPTRSTKNENCVEGAGREAAGLGGWFT--GSSREARQLESGTEGFFLSRDELAHEGLGXXXXXXLEPNTAFAPGTMEIDHL-GGLGASVPPSPITLAGSVDGNNMLPPTRSPKAAKDTNAIAREQ-GR-----------------------SGGGKGXXXXXXXXXXXXXXXXXXXXQQRGHSAGECTGIDAGGGAGRGEPASSAERAASPNGVMPP--PPSRLRINPDSVSTAGAGK-----GKSVTKLVERVINYDTPHADEADSAGVRSTGAAGGGCGMAASHRDLCAAILLNATGAAVDVEERASEAEPHFGRRRSGQGATDE---SGTDDVGGGSEDGFGR----------RADVEAVRALSRRGRHRVSRASPPSSSSSXYXXXXXXXXXXXXXXXXXAGVGDAGTTREAGQGPEADGFESGKIEAAAAGRDGSSSLNHPHHQCPLDLDGCRKPKVGDVPRSSSLEGWPASYVGGAGVGASPFVDAQGFFDLGAATTDGTSLAVLEQAEGKSVNHPDRRGSDPRITDLEAKLGELIRIGDRLKEEAAASTAEPSVTIPSQDLTGLDLSQPHPDFEDGRAATSGGSRFQSTSPNWNNLERLIRGSGGLRAHSHEPPSHVAAAAAPSAFTSAESSPGLAPXXXXXXXXXXXXXXXXXXXXPPSRPEDHPSTAPALSRLLVPPFGNAALRGDFIASLERHLAEYEGGSSGGDGTTPAYDVNGEVEADGRGDGCGSNARRTDGGGRLRQDSDMVAACDGG--EDSMLGAGXXXXXXXXXXXXXXXXXXXXXXXTFLATTTTVRGVPAAPRLAEAGRARAGSSLAGGSKVETAALGVKPAARRVSGG----RVTGLVQDEGKEEGVVVQEPAPRGGEGGTKRPASWAQEYHDYLCSKE 3143
M+E +S+L+ L+KSWD ESR+RLQE AL L + +++A F+V+VELGLHELTAALTSLSRR+DKLEE+TAP + +QD+A+K+L RSARCLSQALPGIASARTRRRALHGYFRESD +RG G RIDPA RALV+EGL+CLAGKVR +TA G+ G SS R A+ G+S + PRRR T S+ E V A E L G + G + R L +E F S L+ L P F G +E++HL G L S+P SPITL GS + +NM PP +P+ KD N A + GR SGG G XXXXXXXX X R A G A+++ A+ + V+ P R N SV+ GA + G K +++N A + G R T G +AS RD+ +LLNA GAA + EERA G + GQG T S D GGG G G R +V+ VRALS R S S S+SS A V A +A + P+ G++ D + + LD +G +K + D R SS V G + VDAQGF DLGAA+T A L + EGK P SD + +LEAKL EL +IGDR+K+EAAAS EPSVTIP+QD + + P P SR + N R RGS + AAA SAFTS ESSP P RP DH T PALS+LL PPF NAALRG+FIASLE+HLA+YE GS T YD G+ DG + +DMVAACDG +DS G+ + L T TTVR +PA+ +EA R+ + K A V P A G GLV+ EG E ++E + G E K +WAQEYHDYLC+K+
Sbjct: 1 MSETPRSSYLECGEEKKSSLSKSWDAESRFRLQENALSLPTS--DDDTALFRVKVELGLHELTAALTSLSRRIDKLEENTAPPETEKQDEAVKELTRSARCLSQALPGIASARTRRRALHGYFRESDEKRGGY-GDRIDPAARALVIEGLACLAGKVRVETARGNKANGRGTWSSTIR--ATRGLSPS-PRRRTQSTHSSVGETGV--ASEEGKMLQGVISRDGGDGDTRMLAPASEPDFSSLRTLS-------LPRVLTPEGEFPAGRLEVEHLRGSLEPSLPSSPITLTGSTN-DNMFPPAPTPEKTKDRNLRAESKVGRWAESARLTEPNEGKPRNKANPSASGGSNGGXXXXXXXXWXSSSADQDDSNSR---------------AINGTSANNSALGATSDSVVENGRPTEGERCNDASVARVGASERTADNGDDRNKYATQLMN-----TTNAATGGSRGTPGEAG----SASDRDVMVRMLLNAAGAAAEAEERAGGP----GTQGDGQGFTRRGLRSWFDSDGGGCRSGGGIQVRQEDLDDFRREVDVVRALSSHLRGSASSTSSSPSASSPSWRAATGSVNVVTAAAPAAVVQQA----KASEVPKDK--SGGRVSPEGVSLDALENSRPRSQRSLLDEEGGKKTPLLDGGRRSSFS--CQHKVSLERDGGARLVDAQGFVDLGAASTCREDSARLAELEGKQPEGPYPEISDTGVAELEAKLEELRKIGDRIKDEAAASM-EPSVTIPTQDFS--ESGSPFPP-----------SRHPHHHQHTNRSART-RGSKPV------------GAAAGSAFTSTESSP------------CRPTVDLLSSAVQPPRPGDHQGTEPALSKLLAPPFNNAALRGEFIASLEQHLAQYEDGSK----HTVKYDAAGKAVGDGH-----------------AEVNDMVAACDGDGDQDSRNGS---------------RRRSDGTSTSVLGTITTVREIPASSVASEA---RSKQLVRAPPKEAEEAERVTPNATGTPSGVSREDTDGLVEGEGHHEKTPIEE-STAGME--AKTSINWAQEYHDYLCNKD 960
BLAST of mRNA_P-fluviatile_contig12.1379.1 vs. uniprot
Match: D8LDJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ2_ECTSI) HSP 1 Score: 199 bits (507), Expect = 5.180e-50 Identity = 136/247 (55.06%), Postives = 166/247 (67.21%), Query Frame = 3
Query: 24 MAEEVNTSHLDLFNGNDDVLNKSWDVESRYRLQEKALRLGKAFFTEESARFQVQVELGLHELTAALTSLSRRVDKLEESTAPTDGAEQDQAMKDLARSARCLSQALPGIASARTRRRALHGYFRESDGQRGSESGGRIDPATRALVVEGLSCLAGKVRADTACGSNIAGGDMGSSLGRSGASWGMSHTFPRRRKSPTRSTKNENCVEGAGREAAGLGGWFT--GSSREARQLESGTEGFFLSRDELA 758
M+E S+++ L+KSWD ESR+RLQE AL L +++A F+V+VELGLHELTAALTSLSRR+DKLEE+TAP D +QD+A+K+LARSARCLSQALPGIASARTRRRALHGYFRE D +RG G R DPA RALV+EGL+CLAGKVR +TA G GG + SS R A+ G+S + PRR+K T S+ E V A E L G + G + R L +E F S LA
Sbjct: 1 MSETPRPSYVEYGEHEKKSLSKSWDAESRFRLQENALSLPTG--EDDTALFRVKVELGLHELTAALTSLSRRIDKLEENTAPPDTEKQDEAVKELARSARCLSQALPGIASARTRRRALHGYFREGDEKRGGY-GDRNDPAARALVIEGLACLAGKVRVETARGK-ANGGGVWSSTTR--ATRGLSPS-PRRQKQSTHSSVGETGV--ASEEEKMLQGVISRDGGDGDTRMLAPASERDFSSLRTLA 238 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1379.1 >prot_P-fluviatile_contig12.1379.1 ID=prot_P-fluviatile_contig12.1379.1|Name=mRNA_P-fluviatile_contig12.1379.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1042bp MAEEVNTSHLDLFNGNDDVLNKSWDVESRYRLQEKALRLGKAFFTEESARback to top mRNA from alignment at P-fluviatile_contig12:894239..900727+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1379.1 ID=mRNA_P-fluviatile_contig12.1379.1|Name=mRNA_P-fluviatile_contig12.1379.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6489bp|location=Sequence derived from alignment at P-fluviatile_contig12:894239..900727+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:894239..900727+ >mRNA_P-fluviatile_contig12.1379.1 ID=mRNA_P-fluviatile_contig12.1379.1|Name=mRNA_P-fluviatile_contig12.1379.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6252bp|location=Sequence derived from alignment at P-fluviatile_contig12:894239..900727+ (Porterinema fluviatile SAG_2381)back to top |