mRNA_P-fluviatile_contig12.1375.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1375.1
Unique NamemRNA_P-fluviatile_contig12.1375.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:851688..857426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons3
Model size4275
Cds size354
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1375.1prot_P-fluviatile_contig12.1375.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 851795..853612 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.5386724-UTR-P-fluviatile_contig12:851687..8517941622815500.5386724-UTR-P-fluviatile_contig12:851687..851794Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 851688..851794 +
1693562063.2637706-UTR-P-fluviatile_contig12:851687..8517941693562063.2637706-UTR-P-fluviatile_contig12:851687..851794Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 851688..851794 +
1622815500.60127-UTR-P-fluviatile_contig12:853612..8574261622815500.60127-UTR-P-fluviatile_contig12:853612..857426Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 853613..857426 +
1693562063.2982635-UTR-P-fluviatile_contig12:853612..8574261693562063.2982635-UTR-P-fluviatile_contig12:853612..857426Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 853613..857426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.554227-CDS-P-fluviatile_contig12:851794..8520251622815500.554227-CDS-P-fluviatile_contig12:851794..852025Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 851795..852025 +
1693562063.2735758-CDS-P-fluviatile_contig12:851794..8520251693562063.2735758-CDS-P-fluviatile_contig12:851794..852025Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 851795..852025 +
1622815500.5722184-CDS-P-fluviatile_contig12:853172..8532821622815500.5722184-CDS-P-fluviatile_contig12:853172..853282Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 853173..853282 +
1693562063.2821457-CDS-P-fluviatile_contig12:853172..8532821693562063.2821457-CDS-P-fluviatile_contig12:853172..853282Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 853173..853282 +
1622815500.584403-CDS-P-fluviatile_contig12:853599..8536121622815500.584403-CDS-P-fluviatile_contig12:853599..853612Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 853600..853612 +
1693562063.2902129-CDS-P-fluviatile_contig12:853599..8536121693562063.2902129-CDS-P-fluviatile_contig12:853599..853612Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 853600..853612 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1375.1

>prot_P-fluviatile_contig12.1375.1 ID=prot_P-fluviatile_contig12.1375.1|Name=mRNA_P-fluviatile_contig12.1375.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=118bp
MAAARYTARLLGKHLARPWRPSPPDSRSGLLDITSRGLVSASHPLLKGRM
GGSSILRPSSPWKKKKTPGAGKKKKPKIHGEPFSRIAINKKNDEKAKRQM
ERFKDAKWDEDMPPFDV*
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mRNA from alignment at P-fluviatile_contig12:851688..857426+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1375.1 ID=mRNA_P-fluviatile_contig12.1375.1|Name=mRNA_P-fluviatile_contig12.1375.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5739bp|location=Sequence derived from alignment at P-fluviatile_contig12:851688..857426+ (Porterinema fluviatile SAG_2381)
AGGCGAACACCTCGAAAGAAGAGCACGAGACGGAGGTATCACCCTTTGGG
GCGCGGGTCCACCAGGGTATCATAAGAATTTGATTCAGTTTCAAGGATCG
AAAGCTAATGGCGGCCGCGCGTTACACTGCTCGGCTTCTCGGCAAACATC
TCGCGAGGCCATGGAGGCCTTCGCCACCCGACAGCCGCAGCGGCCTCCTC
GACATCACCAGCAGAGGCTTGGTGAGTGCGAGTCATCCTCTCTTGAAGGG
GCGAATGGGTGGCTCTTCGATACTTCGGCCGTCATCTCCGTGGAAGAAGA
AGAAGACCCCCGGTGCGGGAAAGAAGAAGAAACCAAAGGTGCAGCAAGCT
CTGAAGTTTTCGAATGCGATCCCTTCGTCGTTACACCGACGAGCAGAATC
GCCGGGCGATTGCAACACTGTAGTGCAGGAAGTAGAACACGAAATTCCAA
AATTTCAAACCAAAGCGCACGTACAGCGTCAAGGCCGTGCGCTTCATATG
TTTTTGGTGAATCGTGGGCGCACGGCACCGTGGCATCCGGTACCTCTGTT
TTTTTATTCATCTCTTGACAAGGTTTGTCAAAAGTCATTTCTGAAGAAGA
GGGTGTCCCAGGTGTAGTCCGGAGGCAAGCGCAGTATTACAAACGAAACA
GTAATTTCCCGAGAAATACGCTAATTCTCGTTCTCGGGCGGGACTCCTTA
AATCCGAGGACATTCAATCCTTCCCCTGAGTCGCCTACGGAGGGCATCTC
TTAGAATGCTCGAAAACGTGCAGCATTTGTGTCCCGAGCAACTATGTAGC
ATACTCTTCGCATCGTCGGGGGTCGAACACGGTCGACCTACACCCCCGGG
CTTCAGAATCCGTGTCGAAAAAGCAGGTTTTACAAGATTTTATGATCATA
TTGGACCACATCATCGTCGTCTGGGCGGAGGAGACTGAAGCAATGTCCAC
AACGTTGAAAATCACGCGGAGTGAATGGATGAAAACACACGCACAGTATG
CGATGAACCTGAGCGGGGAAATATGACTTGTCGCTCTCCTCCCGAATGAC
ATCCGAACACCCGCGCAACACGCAACATCTCTGTTCAATGTCGAGAGTGC
TGCTATCATGTGGTATGCGTGACCGCTTGCTCGTCTTTCGCAATGACATT
ATTTGTTACGTTTGCCTCCATCAGCTTGGATCCAGAGAATGACCGAACTA
TCGCCATCCATGTCGTCCCCTCTGCATGCCTTACTTGCCGACTTCTCCAA
CCAGAGAACTTATTTCACATTCGCACTTCTGGTCACAGGTTCAGAGCAGG
CACCTGGCCTGGTTTCTGTTGCGCTCATGTGCATTCTTGTCCTGTCGTCG
TCTTCACAGATTCACGGGGAGCCCTTTTCACGGATAGCGATAAACAAGAA
AAATGACGAAAAGGCCAAGCGGCAGATGCCTGGCCTGGTTTCTGTTGCGC
TCATGTGCATTCTTGTCCTGTCGTCGTCTTCACAGATTCACGGGGAGCCC
TTTTCACGGATAGCGATAAACAAGAAAAATGACGAAAAGGCCAAGCGGCA
GATGGAGCGGTTCAAGGACGCCAAGTGGGACGAAGACATGCCGCCGTGAG
TGCTCTCTGTCCTTTGCTAGTTGTCATACAATTGTATTGTACGCATATCC
TCATTCTATTCCCACAGGTAGGAGTACCTGTGGTGTGGATCATTGTCATA
CCACCACCGGACAAAAGCGAAAGCTGTTGGGGGATACATGCGACATGGCA
CTGCTGCCGATAAACCAGCACGTGTCAAACGGCCATTCGCTCTCCATACG
TAAAATAGCTTGCCACCCAACACCTCCTGAATCGGTATAACCCAAATGTG
CAAGTCAGAGGTAGGAGGCTTTTACATCCCACACTTAAACCGTGTTTTCC
CTCCTCACGCAGGTTCGACGTCTAGGTTGCGTACGGACGCGCGGAGGTCA
GATCTACCTGGCGAGAGCTTGATATCCACGTACGTCACTGGAACGATATC
AGAGTCGACGGATAGACTATTTTGCACGGCTCAATTCAGCTCTTGAGTTG
CGAAGGGGCAACACACGGCATCAACGCGCCGGCAGTGTAAGCGTGCATGA
GGGTATGCCTGTCGGCGCTGGAGCAGCTTTCCATCGATCAACAGCGTCGC
CATGGTCGCGAGTCCGTCCTCGCAGTCCGTCCTCGCATTCAAGCGTCATG
GCAAGAAAAGGTGGCGGTAGCACTGGAAAAGCTGTGCAGTCGACATGCGG
AGGATGTGATGATGGAAAGCTTTACGCTCTTTCGAGAAGAATGCGTCGAT
TCCACAATGATAATGCTAATGACGGTGGATCTGTTGGGCGTTCCGCAGCA
CTTGATTGTGGCGCTTGTGATCGCCTGTACTCTGACGGAGGCGTGCTAGG
TATGCACCTGGGGGGTGCAACACAAGAGCCGTGACGAGTGCTCCCCGACG
GATCCGATGGACACGTCGTGCCGTGACCCGAAGAAATGTGGCGGTACCAA
CGGCGGAAACCCCGATATCGATGAGGATGACAACCGGTTGCCTCCAGTAG
ATGGGGCGTAAGAGACAAGGGCCGGGGTCGTGACACCCGCCGGAAGACCA
GGAGTCCAAGCAGCAGCAGTTGCTGGGGGTGACCTCCGCCTCTTTTGGTC
CATGTTCGGAGCCAGATACTTTGATATACCGAAGGTGGTGGGTGATATCA
CCGTGACCTGTCCGCAGGGCACCTGGAGGTAAGTTTGGGATTCCGTTATT
TGTCGACATGGTAGGCGCTCTAGATGCGTTTTTTTTCCGTTGAGCTAGCA
GGGCGGAAGAGGCTCATCGGTGATTGGCTTGTATGTATTGCGCCTAAAAA
ATCGACAGAGCGCACTACAACGGAAGAGGAAGCCCTTCTGAGGCAAATCA
GGTTCCGCTCTCTTAACGGAGTGACCGTATCGACATGCTGCGAAGACAGC
CTTGAAGCTTGCTGCGACGACAATCGAATTGCGCAGGAATTTCGATGGCA
CTCACGATGACCTCACCACCACAGCCTTGCACGACTTTGAGTCCAATGTC
ACAAACGACAGGCAGCAGTGTAGCCGAGAAGCCAGAGGCCCAACGGGCAA
ATTTTAACGGAAGCGGCGGGAGTACCCGGGATACACGTTCCCGGTGAACA
AACTCTCGTGCCTGTTGCCTTTTGTCATTCTTCCTTCTTGTTCTCTGCCT
CCGCCTGCCATGTCTGCCCTGGCTTTGTTGTCCGATCTCTTGCTTGGTTT
GTTTTGCACCCCACGTCGATGACATTCTTCTTTCGTGTGCATGGTGCAGA
AATTGCTCGCCTGCCTGGCGCTACCCCAGCTCGGAAAGTCCGGGGTAAAA
TATGTGCGGGAGTACCGCATTGTCGGTATTGGAAGAAAGAAGTACCCACG
TATATGCGTATTGACACGGTCATCAAAGATTGCTAGTAATACGGAGGGAG
AAAGGGCAGGCCGCTAATTGTCTCTGAAAGTGGGCCTCTCCTCTCTCTGT
CCTCAGTGAGTGGTGGAAATCTGCGTTTGTTGGAGAAAGCTCATGGTATT
CCTCGTCTAGGCCGTAAATCGCACCATGTAACTTGACATTCTTTTGCTGA
ATGATGGCGATTGAAAGGAGTAATCATCCTGTGTGCAAGGCAACTCTCTC
ATCTCCTCGTTGGGTTCACAGTGTTTACTGGATTTTTGTCGTCCCGAATC
GAGCTGCTTGTTCCTCTTCCTGCGAACACAGGCCATCAGCTATGAATGGA
ACGGTGCACCATTCGAGAGCATGAAGGTCCATTGTTCAAACTTTGAGATA
ACAAACTCCAGTATCTGAGGCCTGCAGAAGAACCATAAAAAAATCTGCAA
AAGAAGTAGCCCACCGATGGCGTTGATGCTTTGACATTCATAGGCTGAAT
CCGCGGTCATGACACCGTCTCCGAGTGCACCATCGAACGAATGACCACAG
CTGATGTGCAATCGTGCAGCCCTGAGGGTGTCAGCAACAGCTCAGAATGA
TGGTTGGCTGCGAACGACAGTAAATTGCTGGCAAACGACGCGCGCAAGGA
GCAGAGCATCAACCTTGCTCGATGCGAACGTTTCCCATCACTGCTTTTGT
CGCGCCAACTGACAGGTTTCTGTTTGTTCTTCCAAATCACCACCAAGGAT
AAATCCACTGGAGGAGCTCGCTCAATTGCGAGCTTTCAGTTCGGCAGATG
AAGAAGGAGCCGTTGGCCAAGTTGGCGAAATGGGTCTGGACAAGCTGAAG
CGAGGTCTAGCAGACAGTTTTGTCGAGAGTAGCGGCGGCGGCGTACAACC
TCGCTTCCTCTGGAGAATCAGTGTTGCAACCGGTGGATGGGTTTAAACGC
AAGGTTTGAGGTCTGATTTGTTTGGCCCACAACACGTTGTCCACAACGTC
CTTGGGTATGTAGACACTAGTGTCGAGTTTTGTGAGGGGTGCTTGTGACA
GATTTATTTCATATATTTCCCGGCTGTTGATGCCCGTTGTTGTGTCCCTG
CCGTGTCACTATGATTGTTTTGTTGCTTTTTTTTTAGTGGTCGGAGGACA
AAATACTGCAGTGAAATCCACATGTTCGGTAGCGATGCCGTTATTATGTA
CTTGAGAGTTTTGCTGTGCTTGTCATGTTTTGGGCGAAGAGAGTTGTAGA
GCGCGAGGAAGGGGGGACGAGGCGTTCAGTTACGCCGGCGAGGATTTTTT
TTTTGACGAATAGGAAAGGGTTGCGCGTCTCGACAGTTGGTTGTACCCGT
GATAGCGCCAAGGCGTGAGTCATATGTCAGTTTTTGAACCAGCAGAGGTA
CTTTGGGTCGCTTCACGAGTATATTTTATCCCTAATTTGCTTGGTGCTAA
TGGATACGTTCTTCCTTTTGTGATGAGTGATTTTGGCTTGATTCACCCTC
GATTAGCGGAACGAACGATTGCTCCAGTTCCAAACGTCCTGTTTGCGATG
TTGGACGGGGCATTTTGTTCCACATCGGCGTATCACATGATGGCACGGTG
CAAATGCGGAGCAGCACTCGACGCAGCCGAAGATCAAAATATTTTCGCCA
CGGTTTTTAAGAAGCTGCCTATTGCGTTCCCACCTCTCGCCCAGATTTTT
ACGGTCAGGGGGTTCCTCCGTTGATCTCCGGGCCGGTTTCTCGATGCAGT
GGAAAGTGCGAACAAGTTCTAATGTCAACAATAGATTCAGGTATAAGTAC
GTTAACGAGGCTTACGCCGACCCGTTCTCGTTTGGACAGGCGGGAGAATG
AATGGCCAGGTTTTCCAATTGGCATTTCCGTGCTTTAGAATAAATGCACC
TAAAAGTGTACGACTGTTTGGTTTTATCCCCCTAGCCAAAGTTGTTCCCT
CCCCGGTTGCCTTCAAGTTCTTTTAAAGTGAGCTCGGAATAGCCGTACGA
GCTTCGAATACGAGTCGATCGAACCTTGAAGATATGCCATCTGCACACCA
TGACTGACTTTTCGTTCGTGTCAGAGGAAGTAAGACGATCGAGCTCCTCG
TGGATGCGGCCCATTGGAGGGTCCCGTCGGGACTCGCGATGAGGTGTCTG
ATTCAGATGATGAATTCCTCGGTGTTATTCTTCGCAACACGGCTACAGAA
AATGTGGGGGGAACAGATAAATTGCAATACATTGCAACGGTTGTGACGCC
TGGCGTTTTGCGGACGTGGCTTACCCGTTGGAGACGTGAAGTGTAGCGGG
GGCACAGAAGAGTGTGATATTATGACAAGTGACTGGCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:851688..857426+

>mRNA_P-fluviatile_contig12.1375.1 ID=mRNA_P-fluviatile_contig12.1375.1|Name=mRNA_P-fluviatile_contig12.1375.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=708bp|location=Sequence derived from alignment at P-fluviatile_contig12:851688..857426+ (Porterinema fluviatile SAG_2381)
ATGGCGGCCGCGCGTTACACTGCTCGGCTTCTCGGCAAACATCTCGCGAG
GCCATGGAGGCCTTCGCCACCCGACAGCCGCAGCGGCCTCCTCGACATCA
CCAGCAGAGGCTTGGTGAGTGCGAGTCATCCTCTCTTGAAGGGGCGAATG
GGTGGCTCTTCGATACTTCGGCCGTCATCTCCGTGGAAGAAGAAGAAGAC
CCCCGGTGCGGGAAAGAAGAAGAAACCAAAGATGGCGGCCGCGCGTTACA
CTGCTCGGCTTCTCGGCAAACATCTCGCGAGGCCATGGAGGCCTTCGCCA
CCCGACAGCCGCAGCGGCCTCCTCGACATCACCAGCAGAGGCTTGGTGAG
TGCGAGTCATCCTCTCTTGAAGGGGCGAATGGGTGGCTCTTCGATACTTC
GGCCGTCATCTCCGTGGAAGAAGAAGAAGACCCCCGGTGCGGGAAAGAAG
AAGAAACCAAAGATTCACGGGGAGCCCTTTTCACGGATAGCGATAAACAA
GAAAAATGACGAAAAGGCCAAGCGGCAGATGGAGCGGTTCAAGGACGCCA
AGTGGGACGAAGACATGCCGCCATTCACGGGGAGCCCTTTTCACGGATAG
CGATAAACAAGAAAAATGACGAAAAGGCCAAGCGGCAGATGGAGCGGTTC
AAGGACGCCAAGTGGGACGAAGACATGCCGCCGTTCGACGTCTAGGTTCG
ACGTCTAG
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