mRNA_P-fluviatile_contig12.1374.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A6H5L5A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A6_9PHAE) HSP 1 Score: 360 bits (924), Expect = 2.050e-111 Identity = 274/662 (41.39%), Postives = 345/662 (52.11%), Query Frame = 1
Query: 406 MGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKGVLANGELSMSLEHHRNGSISLARGLSENGEGVSVDTCG-LPEALELPREFASVLERVDGPQ-MKRSVELMGQCVQVQRSAHGVLLKAIEAQEALKAAIMDKVREMGLPSVSDMSSITDMCGSGAAHMSG----GSGKHSMGLLNAGGGNITSNF-------LTESPSLSAAAAAAFLSPRTGNGGMDTFSGFRGVNAVXXXXXXSXXXXXXXXXXXXXXXDVKAQTARSTGLGTYAGVASMLQASAQSMQLSAP----PPLN-----KSGMPPGSANLFSFVPTANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-------PRETGLSGTGLAGLGLESVDYWDMGILDTGGAXXXXXXXXXALDETSLRMEMKSSMDMHRLMRSRQKNXXXXXXXXXXXXXXESAGDSS---EASKAR--TGDVGGTNISSDSI----------KSSSSSAKTGAAHGNTFKGGDMXXXXXXXXXXXXTTGSINANTDRRLGGAGVAAGVGGSDSLARQGDAPPPXXXXXXXXXXXXXXXXGSEDAMASLRSDMVVAPT--GDTPTVINGEFNWDEDTMDEQLFSFLLDTPPPG 2253
MGLKKA+PSRLKDLLPKKDRS++ +V++SHIQKLRSFRYQMK TLAGDNLDT +EL QKG+L NGEL MSLEH R+GS+SL RGLSENG+GV++ L EA +PR+ AS ++R++GPQ MKRSVELMGQCVQVQRSAHG+L+ A+E Q+AL A+M+K+R +G P ++S D G AA G G G HS L+ GG +TS+ + SP S + +++ P GNGG+ F G R V S D AR G+GT+AGVASMLQASAQSM+ + P PP N ++ +P GSANLFSFVPT + G PRE G G GLGLE DYW+ +LD G ALDETSLRMEM+SSMD+HR+MR+RQKN + G ++ E AR T DV G N S+D K +SS + TG A + + + + R G A G L APPP GS + M + + V +P GDTPT++N ++NWDED +D QLFSFLLDTP G
Sbjct: 1 MGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILPNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQLKEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQALMTALMEKMRVVGFP----VASTPDARGGAAAPALGETPQGGGCHSTAPLSVSGGGVTSSLWPPNQQQTSSSPLASPSPSSSLPCPPEGNGGLAAFPGNRKVTTTVRVAGGSGGG------------DRVPIPARPVGIGTHAGVASMLQASAQSMKFANPAPAQPPANAPTSTRAAIPGGSANLFSFVPTPRADENPGYKTTASSSGTGSATEPAAPSEEVAGAVATPVAMGASEGGGGPSSGPPREGG----GYLGLGLEVGDYWETDMLDVGNVAAE------ALDETSLRMEMQSSMDIHRVMRARQKNQLQLHAQQEQRQELQGGGGNNADGEVGDARRATADVAG-NSSADGFALPAPRITPGKDNSSGSTTGTAPAANVEADGAP--------------AFSVDPTSRGGATTAARATTGDGPLP----APPPDNGTAATRVAEAV---GSGNGMMTSQQYGVSSPRSDGDTPTLMNADWNWDEDKLDAQLFSFLLDTPQSG 614
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: D8LDI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI9_ECTSI) HSP 1 Score: 353 bits (906), Expect = 5.610e-109 Identity = 275/656 (41.92%), Postives = 346/656 (52.74%), Query Frame = 1
Query: 406 MGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKGVLANGELSMSLEHHRNGSISLARGLSENGEGVSVDTCG-LPEALELPREFASVLERVDGPQ-MKRSVELMGQCVQVQRSAHGVLLKAIEAQEALKAAIMDKVREMGLPSVSDMSSITDMCGSGAAHMSG------GSGKHSMGLLNAGGGNITSNFLTE------SPSLSAAAAAAFLSPRTGNGGMDTFSGFRGVNAVXXXXXXSXXXXXXXXXXXXXXXDVKAQTARSTGLGTYAGVASMLQASAQSMQLSAP----PPLN-----KSGMPPGSANLFSFVPT-------ANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPRETGLSGTGLAGLGLESVDYWDMGILDTGGAXXXXXXXXXALDETSLRMEMKSSMDMHRLMRSRQKNXXXXXXXXXXXXXXESAGDSSEASKARTGDVGGTNISSDSIKSSSSSAKTGAAHGNTFKGGDMXXXXXXXXXXXXTTGSINANTDRRLGGAGVAAGV-----GGSDSLA--RQGDAP-PPXXXXXXXXXXXXXXXXGSEDAMASLRSDMVVAPT--GDTPTVINGEFNWDEDTMDEQLFSFLLDTPPPG 2253
MGLKKA+PSRLKDLLPKKDRS++ +V+ SHIQKLRSFRYQMK TLAGDNLDT +EL QKG+L+NGEL MSLEH R+GS+SL RGLSENG+GV + + EA +PR+ AS ++R+DGPQ MKRSVELMGQCVQVQRSAHG+++ A+E Q+ALK A+M+K+R +G P ++S D G+ AA G G HS LN GG TS + SP S +++ P GNGG+ F G R G+GTYAGVASMLQASAQSM ++ P PP N ++ +P GSANLFSFVPT + XXXXX XX G+PRE G G GLGLE+ DYW+ +LD G ALDETSLRMEM+SSMD+HR+MR+RQKN + G ++ GDVG + ++ ++ +SS+ G D T + N D G A GV GG+ + A R GD P P GS + M + + V P GDTPT++N ++NWDED +D QLFSFLLDTP G
Sbjct: 1 MGLKKAEPSRLKDLLPKKDRSIEADVMSSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVHMAAPDQIKEAFGVPRDLASAIDRLDGPQSMKRSVELMGQCVQVQRSAHGIIMNAMETQQALKTALMEKMRLVGFP----VASRPDARGAAAAAAPSLGETPEGGGCHSTAPLNVSGGGGTSGLWPQNQQRKSSPLASPWPSSSLPCPPEGNGGLAAFPGNR------------------------------------KGIGTYAGVASMLQASAQSMNVANPVPTQPPANAPTSTRAAIPGGSANLFSFVPTPPADKNPVDKTAAPSSSNDPATEXXXXXEEAAGAAVTPVAMGASDGGXXPSGGAPREGG----GYFGLGLETGDYWETDMLDVGNVAAE------ALDETSLRMEMQSSMDIHRVMRARQKNQLQLHAQQEQRQGLQEGGGTNA-----DGDVGDAHGATANVAGNSSADGFALPAPRIPPGEDNSSGSTTGSGPTGTAPATNVEAD-----GGPAFGVNSTSGGGATNTAKARTGDGPLPAPPPDNGTAATHGAEALGSGNGMMTSQQYGVSLPRSDGDTPTLMNADWNWDEDKLDAQLFSFLLDTPQSG 596
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A835Z3W7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W7_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.500e-32 Identity = 85/201 (42.29%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 304 VSAEEGRSCSSSRPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKKDRSLDPEV-IKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKGVLANGELSMSLEHHRNGSISLARGLSENGEGVSVDTCGLPEALELPREFASVLERVDGPQMKRSVELMGQCVQVQRSAHGVLLKAIEAQEALKAAIMDKVREMGLP 903
SA G S +RPKKRFIWPEELHRDFIAAVFD+GLK ADP + LLP + + IKS +QK+R+FRYQM+ G + D E G G L + G +LA + + +GV G + L +P ++ +DG Q++R+VEL+ QCVQVQ S L +A+E Q L+ +M+KV +MG+P
Sbjct: 26 ASARGGGGGSQARPKKRFIWPEELHRDFIAAVFDVGLKSADPRAIASLLPDAESQGGTAIRIKSTLQKMRNFRYQMRKASNGGSSDMPGE----GDHYAGALG---DFGGGGEDALAAATANSRDGVGD---GRRDVLAIPEGVQRLINWLDGGQLRRNVELVAQCVQVQASIQQALSRAMENQRRLQEVMMNKVSDMGMP 216
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A835YLU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU6_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.560e-12 Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 1
Query: 346 KKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPK-KDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKGVLANGELSMSLEHHRNGSISLARGLSENGEGVSVDTCGLPEALELPREFASVLERVDGPQMKRSVELMGQCVQVQRSAHGVLLKAIEAQEALKAAIMDKVREMGLPSVSDMSSITDMCGSGAA 954
KKRF+WP++LH++FIAAVFD GL+ A PS L +LL + + P + S +QK+ S R+Q +T TL + ++ G R G +A + + + G L+ E V G + +LM QCV VQ S + VL +A+ Q+ L A ++ K +GLP GSGAA
Sbjct: 44 KKRFLWPDDLHQEFIAAVFDAGLRAATPSALCELLEDVQPQGATPRRVHSTLQKMSSLRFQARTADG-----TLHKASRTAARHGGS------DERPGIPGIAPPPASTATPAAGEGGGDWGELDAATLSQLSAEGVRGGRGGSEADLMAQCVAVQNSINVVLTRAVANQKRLHALMLAKALALGLPYSQQRPEAESDGGSGAA 236
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 8.390e-12 Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 295 GGAVSAEEGRSCSSSRPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQK--GVLANGELSMSLEHH 627
GG+ A + R KRF WP++LHRDF+AA+FD+GLK + PS + + +PK ++ + E +KSH+QK R R + K + L ++ + G L+ GEL+ L H+
Sbjct: 66 GGSSKARRKAKDTDPRWSKRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQ-ITSERVKSHLQKYRIHRIKSKKEFMSSYDEGLKKIREGTLGTLSAGELASFLTHN 177
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 8.080e-11 Identity = 55/177 (31.07%), Postives = 85/177 (48.02%), Query Frame = 1
Query: 334 SSRPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLA---GDNLDTLDELTQKGVLANGELSMSLEHHRNGSISLARGLSENGEGVSVDTC-GLPEALELPREFASVLERVDGPQMKRSVELMGQCVQVQRSAHGVLLKAIEAQ 852
SS+ KKRF+WP++LHRDF+AA+FD+GLK A P + +++ + L P+ IKSH+QK R R + + G N V A GE A G+S +G S+D+ G+ E+ + D + + L+ C+Q+Q VL +A+ Q
Sbjct: 51 SSKAKKRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSN-TKELTPDHIKSHLQKYRLHRERAREEFLQHFGKNPFVAGAAGTGLVCAKGE---------------AGGVSRDGSASSLDSVNGIGGRAEMDHQG-------DEDAFRGQLNLIRDCIQMQAGFQSVLRQALMQQ 204
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A7S2YNK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNK9_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.620e-10 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 313 EEGRSCSSSRPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKGVLANGELSMSL 618
E +S + R KRF WPEELHRDF++A+FD+GLK + PS L + +PK ++ + E IKSH+QK R R + K TL +L V +G + +L
Sbjct: 181 ENSKSNNDGRWSKRFTWPEELHRDFVSAIFDVGLKHSSPSTLLEQMPKHEQ-ITTERIKSHLQKYRLHRVKSKQEFMHTYTATLQQLQAGTVGKDGSNNKTL 281
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A5D6XW89_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW89_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 6.430e-10 Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 268 TDSGDSDSGGGAVSAEEGRSCSSSRPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKK--DRSLDPEVIKSHIQKLR 510
T+ G S SGGG +A G+ R KRFIWP+ELHR FIAA+FD+GLK A P L L+ D L E +KSH+QK R
Sbjct: 89 TEPGQSSSGGGTPNASGGKQRKYERKTKRFIWPDELHRLFIAAIFDVGLKNASPKALLGLMEAAGPDTGLTTEHLKSHLQKYR 171
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: A0A7S1Z020_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z020_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 9.940e-10 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 325 SCSSSRPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKG----------VLANGELSMSLEH 624
S S +R KRF WP+ELHRDF++A+FD+GLK + PS + + + K D S+ E +KSH+QK R R + K + +L G L++GE++ L H
Sbjct: 318 STSDNRWSKRFTWPDELHRDFVSAIFDVGLKHSSPSAILENMRKHD-SITSERVKSHLQKYRLRRAKSKREFMASYDSAMSKLNSSGGGGNEAEPSSSLSSGEVAAHLSH 426
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Match: B7G3R5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3R5_PHATC) HSP 1 Score: 72.0 bits (175), Expect = 2.370e-9 Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 340 RPKKRFIWPEELHRDFIAAVFDMGLKKADPSRLKDLLPKKDRSLDPEVIKSHIQKLRSFRYQMKTTLAGDNLDTLDELTQKGV-----LANGELSMSLEH 624
R KRF WPE+LHRDF++A+FD+GLK++ PS + + +PK + E IKSH+QK R R + K T+ +L + G LA+ E++ L H
Sbjct: 217 RWSKRFTWPEDLHRDFVSAIFDVGLKQSSPSTILETMPK-HADVTSERIKSHLQKYRLHRIKSKQDFMTAYDATVRKLQKNGTGALKSLADAEVAAHLMH 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1374.1 >prot_P-fluviatile_contig12.1374.1 ID=prot_P-fluviatile_contig12.1374.1|Name=mRNA_P-fluviatile_contig12.1374.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=752bp GVAAAAIAGLALALPGQTRRAEEESRAAAAERRADQTRNRERCRYHTAATback to top mRNA from alignment at P-fluviatile_contig12:840369..848999- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1374.1 ID=mRNA_P-fluviatile_contig12.1374.1|Name=mRNA_P-fluviatile_contig12.1374.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8631bp|location=Sequence derived from alignment at P-fluviatile_contig12:840369..848999- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:840369..848999- >mRNA_P-fluviatile_contig12.1374.1 ID=mRNA_P-fluviatile_contig12.1374.1|Name=mRNA_P-fluviatile_contig12.1374.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4512bp|location=Sequence derived from alignment at P-fluviatile_contig12:840369..848999- (Porterinema fluviatile SAG_2381)back to top |