mRNA_P-fluviatile_contig12.1367.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.470e-22 Identity = 77/196 (39.29%), Postives = 101/196 (51.53%), Query Frame = 3
Query: 381 PGCSLTGSPLSYAKAHKRLSKRMRRLAE-AEQSLPEGTPGTMVTLQFTVGKSENDPCR--GTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLICHHYDRMSRRRQVLSVADFVAPTPEAAAMFAESLSS 959
P SL S +Y A KRL + M +LA E+SL EG T+V+ CR GTGM+S+PN+ G +KALQYVD RL+A AE GVD+R VYLAR A DI+ S + H ++ F R +ILL A++ S +L P F C Y M+ Q VA F+AP A A+ + S
Sbjct: 28 PELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGE-STVVSF---------GACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGGS-----------FIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLS 202
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 106 bits (264), Expect = 4.660e-21 Identity = 77/196 (39.29%), Postives = 101/196 (51.53%), Query Frame = 3
Query: 381 PGCSLTGSPLSYAKAHKRLSKRMRRLAE-AEQSLPEGTPGTMVTLQFTVGKSENDPCR--GTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLICHHYDRMSRRRQVLSVADFVAPTPEAAAMFAESLSS 959
P SL S +Y A KRL + M +LA E+SL EG T+V+ CR GTGM+S+PN+ G +KALQYVD RL+A AE GVD+R VYLAR A DI+ S + H ++ F R +ILL A++ S +L P F C Y M+ Q VA F+AP A A+ + S
Sbjct: 151 PELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGE-STVVSF---------GACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGGS-----------FIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQILS 325
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 103 bits (258), Expect = 4.660e-20 Identity = 68/184 (36.96%), Postives = 92/184 (50.00%), Query Frame = 3
Query: 381 PGCSLTGSPLSYAKAHKRLSKRMRRLAEAEQSLPEGTPGTMVTLQFTVGKSENDPCRGTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLICHHYDRMSRRRQVLSVADFVAPTPEAA 932
P + + Y +A + L + + LA T G QF +S++ GM+SFPN+ G DKALQYVD RLLA AE GVD+R VYLAR A I+VS T+H + F R + L+ AA+++S +LGP F C Y+ MS Q VA F+AP + A
Sbjct: 110 PSLATPSTKQDYERARRELRRELENLAAYPAEFM--TEGQAAIAQFVTCRSKS------GMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGT-----------FMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTA 274
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: A0A7S2GH68_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GH68_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.650e-15 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 3
Query: 552 GTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLICHHYDRMSRR 881
G+GMLS+PN+GG DKAL ++ LAM AE GVDLR++ L RPA +++VSTT+HR F+++P M +L AA L + L + P F +C Y M R
Sbjct: 28 GSGMLSYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKFNSKPT------------EMAVLGDNAAGLAAQLQLIDPRFFLCVDYSSMGNR 125
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: A0A7S2DFF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFF0_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.600e-13 Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 3
Query: 552 GTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRP 737
G+GMLS+PN+GG DKAL ++ LAM AE GVDLR++ L RPA +++VSTT+HR F+++P
Sbjct: 28 GSGMLSYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKFNSKP 89
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 3.040e-12 Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 3
Query: 444 RMRRLAEAEQSLPEGTPGTMVTLQFTVGKSENDPCRGTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDF 725
+MR LA+ Q+LP TPGT+ + TG +S+P GP K QYVDLRLLA AAEAEGVDLR++Y+ R A +++++ T HR F
Sbjct: 44 QMRDLAQRAQTLP--TPGTVQLI--------------TGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGF 121
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: A0A813BJ34_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BJ34_SYMMI) HSP 1 Score: 62.8 bits (151), Expect = 7.020e-7 Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 3
Query: 555 TGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLICHHY-DRMSRRRQVLS 896
+GM+S+PN+GGPD+ +Q D+ LA AEA G+DLR+V L TRH R +L + + L ++ +T A LL L L P ++ C Y D M+R +LS
Sbjct: 163 SGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLL-----------TRHPASLVRSELARSYEKDLTHAVRKVSMTMA-LLSEQLDLLDPAYVTCWTYEDPMARISHLLS 265
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: F0Y634_AURAN (PPM-type phosphatase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y634_AURAN) HSP 1 Score: 63.5 bits (153), Expect = 1.340e-6 Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 3
Query: 417 AKAHKRLSKRMRRLAEAEQSLPEGTPGTMVTLQFTVGKSENDPCRGTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLIC 854
A KR R++ L +A + G P L ++ GM+S+PN+G PDK L + D++ LA AEA G DLR++ + R A + +VST+ HR + P PE+ +L AA L S L + P F++C
Sbjct: 101 AALRKRFFARLQHLRDAPRD--RGAP----VLYLLNVNADGATIPDAGMMSYPNFGPPDKVLHHPDMQTLATMAEAAGADLRVLVVLRGARETLVSTSVHRLGEFPP-----WPEEA-----AVLGNSAAALASELALVDPRFVVC 230
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: A0A1Q9EVB9_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EVB9_SYMMI) HSP 1 Score: 62.8 bits (151), Expect = 1.550e-6 Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 3
Query: 555 TGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDFDTRPDLPSTKPEQLFSRYMQILLTQAALLDSMLGQLGPVFLICHHY-DRMSRRRQVLS 896
+GM+S+PN+GGPD+ +Q D+ LA AEA G+DLR+V L TRH R +L + + L ++ +T A LL L L P ++ C Y D M+R +LS
Sbjct: 401 SGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLL-----------TRHPASLVRSELARSYEKDLTHAVRKVSMTMA-LLSEQLDLLDPAYVTCWTYEDPMARISHLLS 503
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Match: A0A7S0BYH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYH2_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 2.340e-5 Identity = 32/84 (38.10%), Postives = 43/84 (51.19%), Query Frame = 3
Query: 474 SLPEGTPGTMVTLQFTVGKSENDPCRGTGMLSFPNYGGPDKALQYVDLRLLAMAAEAEGVDLRLVYLARPAMDIVVSTTRHRDF 725
S+P + G + + G GM+S+PN+GG KALQY DL L A GV + V L R A ++V ST HR+F
Sbjct: 17 SIPPPSAGWFIPMNSIKGNKN-------GMMSYPNFGGATKALQYPDLDALYAACAEAGVVCKHVVLYRDAYEVVNSTMVHRNF 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1367.1 >prot_P-fluviatile_contig12.1367.1 ID=prot_P-fluviatile_contig12.1367.1|Name=mRNA_P-fluviatile_contig12.1367.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=218bp MRRLAEAEQSLPEGTPGTMVTLQFTVGKSENDPCRGTGMLSFPNYGGPDKback to top mRNA from alignment at P-fluviatile_contig12:698872..705703- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1367.1 ID=mRNA_P-fluviatile_contig12.1367.1|Name=mRNA_P-fluviatile_contig12.1367.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6832bp|location=Sequence derived from alignment at P-fluviatile_contig12:698872..705703- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:698872..705703- >mRNA_P-fluviatile_contig12.1367.1 ID=mRNA_P-fluviatile_contig12.1367.1|Name=mRNA_P-fluviatile_contig12.1367.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1308bp|location=Sequence derived from alignment at P-fluviatile_contig12:698872..705703- (Porterinema fluviatile SAG_2381)back to top |