mRNA_P-fluviatile_contig12.1352.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A6H5JWH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWH2_9PHAE) HSP 1 Score: 171 bits (434), Expect = 4.340e-47 Identity = 91/124 (73.39%), Postives = 96/124 (77.42%), Query Frame = 1
Query: 1 EGYEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
EGYEPDLDGEF+PN++NSVVFLVGAVQ QVSVFVVNLKGRPF+GGLSENRPLLYSLAA FA+TFMSASETI RLNKWLQLEPFPDD FRNAIMLVLVLDI
Sbjct: 1329 EGYEPDLDGEFKPNMINSVVFLVGAVQ-------------------------QVSVFVVNLKGRPFMGGLSENRPLLYSLAATFALTFMSASETIPRLNKWLQLEPFPDDNFRNAIMLVLVLDI 1427
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A836CGN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN5_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.570e-32 Identity = 72/137 (52.55%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 EGYEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRP-------------FVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
E Y PDLDGEF+PNI+N VVFLVGAVQ QVSV+VV LKGRP F+ GL+ENR LL+SLAA FA+ FMSASET+ RLNKWLQLEPFPD FR ++++L LD+
Sbjct: 1679 EDYVPDLDGEFKPNIINGVVFLVGAVQ-------------------------QVSVYVVKLKGRPCVXXXXXXXXXXXFMNGLTENRTLLWSLAATFALVFMSASETVPRLNKWLQLEPFPDSQFRAKLLIILALDL 1790
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A7S0CEF7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CEF7_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.860e-31 Identity = 65/124 (52.42%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 1 EGYEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
EGYE DLDG F+P I+NSVVFLV VQ QV+VFVVNL+GRPF+ GL+ENRPLL+SLAA F +TFM ASE++ LNK+ QL PFP D FR+ I+ +L D+
Sbjct: 107 EGYEADLDGRFQPGILNSVVFLVTNVQ-------------------------QVTVFVVNLQGRPFMNGLTENRPLLWSLAATFILTFMFASESLPGLNKYFQLVPFPSDDFRDFILKILAADV 205
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A7S0KBY2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBY2_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.380e-30 Identity = 65/119 (54.62%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 16 DLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
DLDGEF+P IVNSVVFLV VQ QV+VFVVNL+GRPF+ GL+ENRPLLYSL A F +TFM ASET+ LNK++QL PFP D FRN I+++L D+
Sbjct: 181 DLDGEFKPGIVNSVVFLVSCVQ-------------------------QVAVFVVNLQGRPFMTGLTENRPLLYSLIATFILTFMFASETVPSLNKYMQLVPFPSDDFRNFILILLAADV 274
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A7S3V8N7_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8N7_9STRA) HSP 1 Score: 119 bits (298), Expect = 9.260e-29 Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 7 YEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
YE DLDGEF+P I+NSVVFLV VQ QV+VFVVNL+GRPF+ GL+ENRPLL+SL A F +TFM ASE++ LNK+ QL PFPDD+FR+ I+ +L D+
Sbjct: 1385 YEADLDGEFKPGILNSVVFLVSNVQ-------------------------QVTVFVVNLQGRPFMTGLTENRPLLWSLIATFILTFMFASESVPSLNKYFQLVPFPDDSFRDYILKLLAADV 1481
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A7S1ZGT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGT6_TRICV) HSP 1 Score: 119 bits (297), Expect = 1.240e-28 Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 EGYEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
E Y+ DLDGEF+P I NSVVFLV VQ QV+VFVVNL+GRPF+ GL+ENRPLL+SL F +TFM ASET+ LNK+ +L PFPD+AFR+ I+ +L++D+
Sbjct: 869 EDYKVDLDGEFKPGIFNSVVFLVSNVQ-------------------------QVTVFVVNLQGRPFMNGLTENRPLLWSLLITFILTFMFASETVPSLNKYFELVPFPDEAFRDFILRILMVDV 967
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A7S2UGQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGQ7_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.210e-28 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 7 YEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
Y+ DLDG F+P IVNSVVFLV VQ QV+VFVVNL+GRPF+ GL+ENRPLL+SL A F +TFM ASE++ LNK+ QL PFPDDAFR+ I+ +L D+
Sbjct: 1396 YKVDLDGAFKPGIVNSVVFLVSNVQ-------------------------QVTVFVVNLQGRPFMTGLTENRPLLWSLLATFILTFMFASESVPGLNKYFQLVPFPDDAFRDFILKILAADV 1492
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A812UPZ1_SYMMI (Atp13a1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UPZ1_SYMMI) HSP 1 Score: 115 bits (289), Expect = 3.380e-28 Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 16 DLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
DLD E++P++VNSVVFLV AVQ QVSVFVVNLKG PF+GGL++N PLL+SLA F TFM ASE+I +LN++LQLEPFP AFRN +++ L +D+
Sbjct: 253 DLDSEYKPSVVNSVVFLVTAVQ-------------------------QVSVFVVNLKGPPFMGGLAQNTPLLWSLAVTFVGTFMCASESIPQLNQFLQLEPFPSIAFRNTVLVALAIDV 346
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: A0A7S1ZNT5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZNT5_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.230e-28 Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 16 DLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
DLDGEF P IVNSVVFLV VQ QV+VFVVNL+GRPF+ GL+ENRPLL+SL A F +TFM ASE++ LNK+ QL PFPD+AFR+ I+ +L+ D+
Sbjct: 460 DLDGEFRPGIVNSVVFLVSNVQ-------------------------QVTVFVVNLQGRPFMTGLTENRPLLWSLLATFILTFMFASESVPSLNKYFQLVPFPDEAFRDFIIKILIADV 553
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Match: K0R4W1_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4W1_THAOC) HSP 1 Score: 117 bits (292), Expect = 5.890e-28 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 1 EGYEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRHAQVSVFVVNLKGRPFVGGLSENRPLLYSLAANFAITFMSASETIARLNKWLQLEPFPDDAFRNAIMLVLVLDI 372
+ Y+ DLDGEF+P I+NSVVFLV VQ QV+VFVVNL+GRPF+ G++ENRPLL+SL A F +TFM ASE++ LNK+ QL PFP D FRN I+ +LV D+
Sbjct: 1035 DDYKVDLDGEFKPGILNSVVFLVSNVQ-------------------------QVTVFVVNLQGRPFMTGMTENRPLLWSLLATFILTFMFASESVPGLNKYFQLVPFPSDDFRNFIIKILVADV 1133 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1352.1 >prot_P-fluviatile_contig12.1352.1 ID=prot_P-fluviatile_contig12.1352.1|Name=mRNA_P-fluviatile_contig12.1352.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=124bp EGYEPDLDGEFEPNIVNSVVFLVGAVQQWQNKFAKEREREGDRANQHLQRback to top mRNA from alignment at P-fluviatile_contig12:470453..472362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1352.1 ID=mRNA_P-fluviatile_contig12.1352.1|Name=mRNA_P-fluviatile_contig12.1352.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1910bp|location=Sequence derived from alignment at P-fluviatile_contig12:470453..472362- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:470453..472362- >mRNA_P-fluviatile_contig12.1352.1 ID=mRNA_P-fluviatile_contig12.1352.1|Name=mRNA_P-fluviatile_contig12.1352.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=744bp|location=Sequence derived from alignment at P-fluviatile_contig12:470453..472362- (Porterinema fluviatile SAG_2381)back to top |