mRNA_P-fluviatile_contig12.1347.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE) HSP 1 Score: 810 bits (2092), Expect = 1.450e-263 Identity = 504/822 (61.31%), Postives = 538/822 (65.45%), Query Frame = 1
Query: 2140 ECGKTLSAAASRRFLLRYPEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKGKRGALWSSKEIGRRSLGVYWL*WSRRPLTGRKSGR*MRSVKPVTRSVKPVAELVLLAIRLTRRLVVARLTRRGASVPAVGAVASPALL*IAGYATSQAISLGTASRYRLKSLGANLRQRRQGLGNRRRDLVNSSRGVSSDRVSSRVQPSRVGQFFRRSRSKLGAMGCQQHFPRRLFPFNGLRRRLTLRRFRRGGPDPWMASRACTPKGRCGSHWYVVFG*FVCPGGS*VYGVP--------GACGARLWVRSDINVCARRAQVTSMLS*CFG----HASYGGCASCTDGRRQLPVRLALHTEWGPVVLRSSAMSSAGVTRLKEILGRRCGAFRRELRGDPPAKVQP------LKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPKPGRAGGFCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEFLQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTKRIASNRAIKSEAWTAGMAEAWTSAQDLV 4551
E GKTLSAAASRRFLLRY EYERVV RGNEGRVVQRKPT I ELLLVHIRKCLSSL+FEGKKILTEAELREG SLNAEISGEALVEPAEAKAGVTRAAT+KPGASVL+RVYAV SALEYYLAENPNVARLY NADDEWLEESAHVVSKALVK ISPPEFK + + + G + + +K +P K + RRLVVARL RRGASVPAVGAVASPALL IAGYATSQAISL TAS +RL+SLGANLRQRRQGL NRRRDLV+SSRGVSS+RVSSRVQ SRVG F+RSRSK+GAMG QQHFPR LFPF GLRR LTLRRFRRGGP PWMASRACTPKG S W +F S GV GA + D + RA + + +G HA AS V A E V + A+ E+ + R L P + P KVTLKPGAQPVKAKARV SPAKATWLTGCMAALVAMGMVVRTIQAV ASPAMAVPK GRA +MTE LQG NC+VWVDDVVWWGIDE L LDEI RRLEDKGIFAAAH CLF +TKIKWCGKVYSGGQVAHDPARLQGLAD+RRPETAGELMQ LQAVNWLR SLPRLAEVVE LRRLLEE+MASAPRRTKRIASNRAIKSEAWTAGMA+AWTSAQDLV
Sbjct: 46 EYGKTLSAAASRRFLLRYAEYERVVTRGNEGRVVQRKPTSIPELLLVHIRKCLSSLHFEGKKILTEAELREGLSLNAEISGEALVEPAEAKAGVTRAATVKPGASVLERVYAVHSALEYYLAENPNVARLYCNADDEWLEESAHVVSKALVKEISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEAIDWKKIENVDAERQPRDAERKTRGGARAAGDKSERRLVVARLARRGASVPAVGAVASPALLGIAGYATSQAISLETASGHRLRSLGANLRQRRQGLKNRRRDLVSSSRGVSSERVSSRVQSSRVGPLFQRSRSKVGAMGWQQHFPRPLFPFKGLRRHLTLRRFRRGGPSPWMASRACTPKG---SMWIALFSACNEKDMSVAAGVAHGVGFGGVGAIPFSVMPGEDDTILLARATLKKLGIDVYGSLAVHARQKAIASVKG------VENAAFHECRRVAVAVEALQHNNKVEPVELHDE---SVTRALSRGPNMSMAPEEEEAQRKVTLKPGAQPVKAKARVYSPAKATWLTGCMAALVAMGMVVRTIQAVWASPAMAVPKRGRA----------------------------------------------------------------------------------------VMTEILQGLNCMVWVDDVVWWGIDETDLPNALDEILRRLEDKGIFAAAHMCLFFDTKIKWCGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLV 767
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE) HSP 1 Score: 664 bits (1712), Expect = 1.950e-202 Identity = 434/859 (50.52%), Postives = 491/859 (57.16%), Query Frame = 1
Query: 2140 ECGKTLSAAASRRFLLRYPEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKG---ISPPEFKGKRGALWSSKE---IGRRSLGVYWL*WSRRPLTGRKSGR*MRSVKPVTRSVKPVAELVLLAIRLTRRLVVARLTRRGASVPAVGAVASPALL*IAGYATSQAISLGTASRYRLKSLGANLRQRRQGLGNRRRDLVNSSRGVSSDRVSSRVQPSRVGQ----------FFRRSRSKLGAMGCQQHFPRRLFPFNGLRRRLTLRRFRRGGPDPWMASRACTPKGRCGSHWYVVFG*FVCPGGS*VYGVPGACGARLWVRSDINVCARRAQVTSMLS*CFGHASYGGCASCTDGRRQLPVRLALHTEWGPVVLRSSAMSSAGVTRLKEILGRRCGAFRRELRGDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPKPGRAGG---FCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEFLQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTKRIASNRAIKSEAWTAGMAEAWTSAQDLVAHAVALSHPKEG*TTWCEAMLMYTPTTAISHTFSIL 4659
E GKTLSAAASRRFLLRY EY+RVV +YF+ KK L EAEL EG S+NAEIS EALV+P EAKAGVTRAATMKPG SVL+RVYAV SALEYYLAE PNVARLY +ADDEWLEE A+VVSKAL+K + K G W E R++ G GR +G S KP + R G + + G +R+ K+ + G S + + + P R GQ FRRS SK+GAM Q+HFPR LFPF L RRLTL RF+RGGP PWMASRACTPK S W + L H E P+ + A++ A L R + KV+PLK+TLKPG Q V+ KARV SPAKATWL+GCMAALVAMGMVV+TIQAV ASPAM VPKPGR G + +DY RANLQCEKVP VVP+QE Q+SML+GA CFGK DLLQGYWQ PLAESAREIF+I TPEGL P RVPQ VL ATGYFQA+MTE LQG NC VWVDD +WWGIDE LL TLDEI RL+D GIFAAAHKC F +TKI+WCGKVYSGGQVA DP RLQGL D+RRPETAG+LMQFLQAV WLR SL RLAEV+E +R LLE NMASAPR+TK IA NRAIK EAWTAGM EAW SAQDLVAHAVALSHPK+G A+LM+ P + H S L
Sbjct: 39 EYGKTLSAAASRRFLLRYAEYKRVV------------------------------VYFDRKKNLAEAELLEGLSINAEISREALVKPVEAKAGVTRAATMKPGVSVLERVYAVHSALEYYLAEKPNVARLYHHADDEWLEELANVVSKALMKDPGCVLAVMVKEATG--WKKIEKVDAERKARGG-----------GRAAGEKFNKAARGGASGKPRGQ------------------RSGGGQXXXSGSSGNCWI---------CDKPGHVARHCKKASSE------KSGGKPAPAAAGSEKSPARPHQQQQASPQREGQQPGSIVQGRAAFRRSSSKVGAMAWQRHFPRCLFPFKELLRRLTLLRFQRGGPRPWMASRACTPKE---STWIAL------------------------------------------------------------------ALQHHNEKEPMDVHDEAVTRA--------LSRGPNMSVPPEEEEVQRKVEPLKMTLKPGVQHVQEKARVYSPAKATWLSGCMAALVAMGMVVKTIQAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLNCAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDG-----FAVLMF-PDASEEHWGSFL 738
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5L1I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1I2_9PHAE) HSP 1 Score: 415 bits (1067), Expect = 6.990e-123 Identity = 338/824 (41.02%), Postives = 399/824 (48.42%), Query Frame = 1
Query: 2140 ECGKTLSAAASRRFLLRYPEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKGK----RGALWSSKEIGRRSLGVYWL*WSRRPLTGRKSGR*MRSVKPVTRSVKPVAELVLLAIRLTRRLVVARLTRRGASVPAVGAVASPALL*IAGYATSQAI----SLGTASRYRLKSLGANLRQRRQGLGNRRRDLVNSSRGVSSDRVSSRVQPSRVGQFFRRSRSKLGAMGCQQHFPRRLFPFNGLRRRLTLRRFRRGGPDPWMASRACTPKGRCGSHWYVVFG*FVCPGGS*VYGVPGACGARLWVRSDIN-VCARRAQVTSMLS*CFGHASYGGCASCTDGRRQLPVRLALHTEWGPVVLRSSAMSSAGVTRLKEILGRRCGAFRRELRGDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGM-VVRTIQAVCASPAMAVPKPGRAGGFCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRV---PQGVLKATGYFQALMTEFLQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTKRIASNRAIKSEAWTAGMAEAWTSAQDLVAHAVALS 4572
E GKTLSAAASRRFLLRY EYERV A GNEGRVVQRKPT ISELLLVHIRKCLSSLYFEGKKILTEAELREG SLNAE SGEALVEPAEAKAGVTRAA+MKP ASVL+RVYAV SALE YLAENPNVA L+RNADDEWLEES HVVSKALVKGISPPEFK G + K R + V VK T K + +RL L+ RG + G V IAG +S A + G+A+ + G +++QG G D V+ + P P P ++A P A A W ++ V + A+ + + + P+RLALHTEWGPVVL +P + ++ PG T L G A L +G+ V ++ A A+A K F + R + E + + N+E + + A + + + +KP ++V E + K V P + G +A+MT+ LQG +C+VWVDDV WWGIDE LL TLDEI RRLEDKGIFAAAHKCLF +TKIK CGK AVNWLR SLPRLAEVVE LRRLLEE+MASAPRRTKRIASNR I+SEAWTAGMAEAWT AQDL AHAVALS
Sbjct: 38 EYGKTLSAAASRRFLLRYAEYERVAACGNEGRVVQRKPTSISELLLVHIRKCLSSLYFEGKKILTEAELREGLSLNAETSGEALVEPAEAKAGVTRAASMKPSASVLERVYAVHSALECYLAENPNVAWLHRNADDEWLEESEHVVSKALVKGISPPEFKANVESSLGLQGNCKTEPERVIAVM--------------------VKEAT-DWKKTEKWARWPVRLFWELLGIVWEVRGKTCTGGGRVWK-----IAGATSSAAAGGSATSGSAAGFNRPEYGRFSEEQKQGRG---------------DAVAEALPPP---------------------------------------------PVPVQGTKAS----------------------------PDATTAPAWRSQSMDGVASLHAEGVDVDR------------TVPTTNKACPLRLALHTEWGPVVL------------------------------------EPFRFSVMPGEDD-------------TILLG-GATLKKLGIDVYGSLAAHARQKAIAAVKGVENAAF---HECRRVAVAAEALQH--NNEEEPVELRDEA-------VTRAFSRKPN-------MSMVPEEEKVQRKAVWASPAMAVPKPG--RAVMTDILQGLSCMVWVDDVAWWGIDETDLLNTLDEILRRLEDKGIFAAAHKCLFFDTKIKCCGK----------------------------------AVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRPIESEAWTAGMAEAWTLAQDLAAHAVALS 630
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 2.220e-112 Identity = 230/390 (58.97%), Postives = 269/390 (68.97%), Query Frame = 1
Query: 3517 SAMSSAG--------VTRLKEILGRRCGAFRRELR-GDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPKPGRAGGFCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEFLQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTKRIASNRAIKSEAWTAGMAEAWTSAQDLVAHAVALSHPKEG*TTWCEAMLMYTPTTAISHTFSIL 4659
SA+SSA V RL+ I+ R AFRR LR GDPPA V+PL+VTLKPGA+PVKA+ RV +P K WL G +G+V +QAV AS AMA PK G G+ +SD+ AN Q EKVP V+PN EA ++ L AK +G DLLQ YWQ PLA A+EIFTI TP GL TPKRVPQG+L AT YFQA +T L G NC VWVDDVV+WG+D+ LL TLD I RLE G++ AAHKC F T I WCGKVYS GQV HDP RL GLA +RRPETAGELMQFLQAVNWLR SLPR+AEVV LR LE+++ A RTKR+A NRAI ++A T + EAWT+AQDLVA AVALSHP G C A+LM+ P + H S L
Sbjct: 712 SAVSSAAAAGLEEPHVGRLRGIISERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWLAG-------LGLVFLNMQAVWASAAMATPKKG---GYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLNCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG----C-AVLMF-PDASDEHWGSFL 1085
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 1.310e-106 Identity = 207/388 (53.35%), Postives = 259/388 (66.75%), Query Frame = 1
Query: 3517 SAMSSAGVTRLKEILGRRCGAFRRELRGDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPK-PGRAGGFCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEFLQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTKRIASNRAIKSEAWTAGMAEAWTSAQDLVAHAVALSHPKEG*TTWCEAMLMYTPTTAISHTFSILMRACRS 4677
+ +S G+ RL++++ RR FRR +RGDPPA V P+ V LK GA+PVKA+ R +P K WLT C+AALVA+G+V +QA+ AS M PK G + F+ D+ N Q EK P +P+ EA M L A C+G D+LQGYW PLA A+EIFT++ P GL +P+RVPQGVL AT Y+Q M L NCIVWVDD+V+WG E LL TLD I R E G+F AAHKC F T +KWCGKVYS G + HD RL GLA+LRRPETAGELMQFLQAVNWLR SLPR++E+V LR LE +MA P RTKR+ASNRAI +AWT M E+W AQD+VA+AV L HP G +A+LM+ P + H S + + +S
Sbjct: 612 AGLSPWGLDRLRQVVDRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLNCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAG-----KAVLMF-PDASDEHWGSFVTQVPQS 993
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5JNT7_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT7_9PHAE) HSP 1 Score: 282 bits (721), Expect = 3.380e-80 Identity = 146/160 (91.25%), Postives = 152/160 (95.00%), Query Frame = 1
Query: 2140 ECGKTLSAAASRRFLLRYPEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFK 2619
E GKTLSAAASRRFLLRY EYER+V RGNEGRVVQRKPT ISELLLVHIRKCLSSLYFEGKKILTEA+LREG SLNAEISGEALVEPAEAKAGVTRAATMKPGASVL+R+YA+ SALEY+L NPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFK
Sbjct: 38 EYGKTLSAAASRRFLLRYAEYERLVGRGNEGRVVQRKPTSISELLLVHIRKCLSSLYFEGKKILTEAKLREGLSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLERIYAIHSALEYFLVVNPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFK 197
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE) HSP 1 Score: 259 bits (662), Expect = 7.320e-69 Identity = 251/744 (33.74%), Postives = 346/744 (46.51%), Query Frame = 1
Query: 2113 VWMPRRGQSECGKTLSAAASRRFLLRYPEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLDRVYAVQSALEY-YLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKGK-------RGALWSSKEIGRRSLGVYWL*WSRRPLTGRKSGR*MRS---VKPVTRSVKPVAELVLLAIRLTRRLVVARLTRRGASVPAVGAVASPALL*IAGYATSQAISLGTASRYRLKSLGANLRQRRQGLGNRRRDLVNSSRGVSSDRVSSRVQPSRVGQFFRRSRSKLGAMGCQQHF-PRRLFPFNGLRRRLTLRRFRRGGPDPWMASRACTPKGRCGSHWYVV----FG*FVCPGGS*VY--GVPGACGARLWVRSDINVCAR-RAQV----TSMLS*CFGHASYGGCASCTDGRRQLPVRLAL--------HTEWGPVVLRS-------SAMSSAGVT--------RLKEILGRRCGAFRRELR-GDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPKPGRAGGFCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEFLQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGI 4203
VW R E G+T S A+S RF +Y EYER + N G+ ++R +LL I KCLS YF+G + L E +L E + +AE + +EP+ A A VTR M A+ +DR+ AV+S LE Y + N A ++N SA V+SKA+V +PPEFK + +G+ + E+ + W L R+ G+ + S + E R R V V + + +P +L+ L + +RRQ L ++S S++ V V P G R + G + H P L +G RR L + + C + + W +V F V G V G P + V + C+R RA V T+ C ++GR Q+ A+ H + P S SA+SSA V RL+ I+ R AFR +R GDPPA V+PL+VTLKPGA PVKA+ R +P K WL GCMA+ V +G+V +QAV AS AMA PK G G+ +SD+ AN Q EKVP V+PN EA M+ K G DLL+ Y Q+PL+ A++IFTI TP GL TPKRVPQG+L AT YFQA ++ L+G NC+VWVD VV G++E LL TLD I RL+ G+
Sbjct: 29 VWGNRLKPPEYGRTFSRASSLRFFTQYNEYERSMGLCNSGQSIKRPLLNECQLLRQSIHKCLSRTYFDGTE-LEETDLCEALAKHAECWTDDTIEPSIAAAAVTRMVAMGTKATAVDRIDAVRSRLEREYPSAERNSAGAFKNG-------SAAVMSKAVVAESAPPEFKVEVESKLDMQGSWKDNPELVFEIARDVAVEWRTVELADRQRGQSRGGGVQARKKNISATEMEENERAWWRWRCRCVFICQACYEFQVDGLFLLVNPRAR-------------------KLRRLSSRQTRRRQ------LPLPSASFAASTEGVG--VPPGPEGPCVPAFRG-VQPGGRRGHTKPGELKVADG-RRVLEV------------IQKTCPVRIALHTSWGLVSVDPFSLAVMTGNDEVVILGNPTLKALGIDVYESLGTCSRSRASVMGVQTTAWKECRRVTLAVDALQRSEGREQVEQDPAVKRLVAQRPHADMSPEEEASARSASLDSAVSSAVVAGLDEPHVGRLRSIIRERWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKG---GYRLLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAYCQRPLSPEAQKIFTIATPRGLHTPKRVPQGILNATSYFQATLSRILEGLNCLVWVDGVVNRGMEEDDLLNTLDMIVERLDGAGL 720
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE) HSP 1 Score: 244 bits (624), Expect = 3.440e-64 Identity = 130/292 (44.52%), Postives = 174/292 (59.59%), Query Frame = 3
Query: 4587 LDYLV*GDVNVYTDHRNLAYIFDPDACVS*LPKTTAQRLEQWKMVLAQFQYPIMHISGERNCWGDLLSRWVKVPAVKVRAVVVFAPSEPDDTMPSKEVSRRVQQSAREQVRTRAHGAEVFMAPHAKAVKDSEGIFRIKVKGREVMWIPEDAKNNVSWSALICEAQDMGVRWQLCNDYKSTAVGFAWKTRWKSLSNSA-----CTV*IRGRVI*SQGRLEKQYGTRPGDVVHYDYMYVGQSGLLNIEGLDEGVGFKYILVVMDDLSKFVWFEPTESCGISRTQ----NYCGSL 5435
L+YL+ G V+++TDHRNLAYIFDP+AC+S +PKTTAQRLE WK VL Q+ Y I HISGERNCWGDLLSRWV VPAV R+ VF PS PD +PSK R VQQ+ R V F + D EG+FR+ + GR+V+WIP+ A++ L ++ G R ++ W T + + C G ++ + E +G RPG+V+H+DY++VG+SG L +GLDE G+ Y+LV+MDDLS F W EPT +C T N+C +L
Sbjct: 264 LEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASV---GDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREY-CCWSTMDRDVKEFVQQCLHCMDSKSGEIV-PRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTL 550
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6A3GK08_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GK08_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.260e-54 Identity = 130/353 (36.83%), Postives = 197/353 (55.81%), Query Frame = 1
Query: 3538 VTRLKEILGRRCGAFRRELRGDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPKPGRAGGFCFMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEFLQ---GSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTKRIASNRAIKSEAWTAGMAEAWTSAQDLVAHAVALSHPKEG 4587
V RL+ I R +R L DPPA+V P+K+ LKPGA+P + K R P +L A LV +G V ++ A PA+ V K G G F +DY N E + V+PN + + +KGA FG D ++GYWQ LAE +E + +T + TP+RVPQG A +FQ+ + + L+ + +VW+DD++ + D L+ L+ + L+ G +A K +++WCGK+ SG V HDP ++ L + P+TAGEL QFL A NW+R SL A V L+ L++ +ASA +RTKRIA+ A++ TA +A+ ++L+ ++ L+HPK+G
Sbjct: 48 VPRLRRI-ATRYDIWRLRLGDDPPARVPPMKIRLKPGAKPYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTG--GEFRQTADYKPVNGDMEAIVGVMPNIQTDLECVKGACFFGLFDFIKGYWQLALAEECQEWLSYMTHRKVYTPRRVPQGCTDAALFFQSTIQKCLEELLNKHLLVWIDDLLLFASDASTYLSKLERLFELLDFFGFKLSAKKSSLFEREVRWCGKLISGDGVHHDPEIIKALQAMPYPQTAGELQQFLCATNWMRDSLIDYARVARPLQDKLDDALASASKRTKRIAAGVAVE---LTALQRKAFDDVKELLTRSMTLAHPKDG 394
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA) HSP 1 Score: 197 bits (502), Expect = 7.690e-51 Identity = 124/326 (38.04%), Postives = 174/326 (53.37%), Query Frame = 1
Query: 3511 RSSAMSSAGVTRLKEILGRRCGAFRRELRGDPPAKVQPLKVTLKPGAQPVKAKARVSSPAKATWLTGCMAALVAMGMVVRTIQAVCASPAMAVPKPGRAGGFC----FMSDYSRANLQCEKVPNVVPNQEAQMSMLKGAKCFGKPDLLQGYWQKPLAESAREIFTIVTPEGLITPKRVPQGVLKATGYFQALMTEF---LQGSNCIVWVDDVVWWGIDEIGLLTTLDEIPRRLEDKGIFAAAHKCLFVNTKIKWCGKVYSGGQVAHDPARLQGLADLRRPETAGELMQFLQAVNWLRKSLPRLAEVVEALRRLLEENMASAPRRTK 4467
R+ +S+ GV RL+EIL RR +FR E DPP KV PL+V + AQP KA+ R SP +L A L+ G+V ++ AS V K + D N + E +P +P E + L+GAK D +GYWQ PL E ++E+FT +T G+ TP RVP G A Y Q ++ E L G+ + W+DD++ + E LL LD++ R E G+ A KC F ++KWCGK S V H R+QGL +++ P+TAG+L QFL AVNW+R+S+P + L +LEE M +A R K
Sbjct: 45 RAKGLSAKGVKRLREILLRRQDSFRLEFGCDPPVKVAPLQVRVTVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDILGYAESEDELLQLLDQVLARCEVYGLKLHAKKCEFFEIEVKWCGKTVSAAGVRHCSDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKK 370 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1347.1 >prot_P-fluviatile_contig12.1347.1 ID=prot_P-fluviatile_contig12.1347.1|Name=mRNA_P-fluviatile_contig12.1347.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=356bp MSSAGVTRLKEILGRRCGAFRRELRGDPPAKVQPLKVTLKPGAQPVKAKAback to top mRNA from alignment at P-fluviatile_contig12:445327..452360+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1347.1 ID=mRNA_P-fluviatile_contig12.1347.1|Name=mRNA_P-fluviatile_contig12.1347.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7034bp|location=Sequence derived from alignment at P-fluviatile_contig12:445327..452360+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:445327..452360+ >mRNA_P-fluviatile_contig12.1347.1 ID=mRNA_P-fluviatile_contig12.1347.1|Name=mRNA_P-fluviatile_contig12.1347.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2136bp|location=Sequence derived from alignment at P-fluviatile_contig12:445327..452360+ (Porterinema fluviatile SAG_2381)back to top |