mRNA_P-fluviatile_contig12.1343.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.070e-88 Identity = 143/179 (79.89%), Postives = 158/179 (88.27%), Query Frame = -2
Query: 3 SCRLFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAVYDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEYAHNVTLGELPKKEFAALASFVRAAFANDELGAKVVAERAAGFETIAHQTIGGAGERQAFNVRILS 539
S R +MP W LDELF CRQAV+PHVPETD+RERF KVGGVARAV+DA+KL QVCLKM++AASNMDL +LQQILSR DD D+ STDRSGDALLHL PIPETGFEE SVDFASE+AH VTLGELPKKEFA LASFV AAFA+DELG KV AERAAGFETIAH+TIGGA E+Q F++RILS
Sbjct: 201 SRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERAAGFETIAHKTIGGASEQQWFDMRILS 379
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: A0A090B923_HYAAE (RxLR effector candidate protein (Fragment) n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090B923_HYAAE) HSP 1 Score: 58.9 bits (141), Expect = 5.560e-7 Identity = 43/114 (37.72%), Postives = 58/114 (50.88%), Query Frame = -2
Query: 198 RLFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAV--YDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEY 533
RLFMPVWS E+F+CR+ +Y + P + +R+ K GGVAR V Y K Q LK SN+ + + S G + +D S LLH P+ F +DFAS Y
Sbjct: 288 RLFMPVWSKQEIFKCRELLYSNTPVEIVEKRYMKWGGVARYVLQYAEDKALQKVLKEAITKSNLQTILTASVESSGVE------SDVSH-RLLHFRVNPD--FCYKCLDFASVY 392
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: M4BU89_HYAAE (RxLR effector candidate protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BU89_HYAAE) HSP 1 Score: 58.9 bits (141), Expect = 5.900e-7 Identity = 43/114 (37.72%), Postives = 58/114 (50.88%), Query Frame = -2
Query: 198 RLFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAV--YDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEY 533
RLFMPVWS E+F+CR+ +Y + P + +R+ K GGVAR V Y K Q LK SN+ + + S G + +D S LLH P+ F +DFAS Y
Sbjct: 309 RLFMPVWSKQEIFKCRELLYSNTPVEIVEKRYMKWGGVARYVLQYAEDKALQKVLKEAITKSNLQTILTASVESSGVE------SDVSH-RLLHFRVNPD--FCYKCLDFASVY 413
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: A0A6G0WL06_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WL06_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.630e-6 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = -2
Query: 198 FMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAVY--DAKKLSQVCLKMESAASNMD-LGVLQQILS--RGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEY 527
F+PVW+L+EL+ECRQ YPH T L +R+ GGVAR + DAK L M++A ++D + ++ I + R + +A LLH+ + ++ VD AS+Y
Sbjct: 282 FLPVWTLNELYECRQECYPHFNITTLDDRYRIFGGVARPAFRTDAKMLD-----MDAALIDVDAVKCVRNIAAPTRIYQNAHM---------LLHIIVSDDGNYQFECVDIASKY 382
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: A0A090BC21_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090BC21_HYAAE) HSP 1 Score: 55.5 bits (132), Expect = 8.980e-6 Identity = 38/113 (33.63%), Postives = 53/113 (46.90%), Query Frame = -2
Query: 198 LFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAV--YDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEY 530
LFMPVW+ +E++ CR +Y P + +RF K GGVAR V Y K Q LK +++ L V + S G + LLH + G+E DFA+ Y
Sbjct: 238 LFMPVWTEEEIYRCRDLLYSTTPVETVEKRFYKWGGVARYVLSYAKDKAKQKVLKEAIGQADLKLIVSASVESSGVEC-------NVSHRLLHFRVTRDFGYE--GFDFATNY 341
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: M4C5N5_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5N5_HYAAE) HSP 1 Score: 55.5 bits (132), Expect = 9.060e-6 Identity = 42/114 (36.84%), Postives = 57/114 (50.00%), Query Frame = -2
Query: 198 RLFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAV--YDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEY 533
RLFMPVWS E+F+CR+ +Y + P + +R+ K GGVAR V Y K Q LK SN+ + + S G + +D S LLH + F +DFAS Y
Sbjct: 263 RLFMPVWSKQEIFKCRELLYSNTPVEIVEKRYMKWGGVARYVLQYAEDKALQKVLKETITKSNLQTILTASVESSGVE------SDVSH-RLLHFRVNRD--FCYKCLDFASVY 367
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: G3C9U8_HYAAE (RxLR effector candidate (Fragment) n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=G3C9U8_HYAAE) HSP 1 Score: 54.7 bits (130), Expect = 1.580e-5 Identity = 49/179 (27.37%), Postives = 78/179 (43.58%), Query Frame = -2
Query: 24 SC-RLFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAVYDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSG------DALLHLSPIPETGFEESSVDFASEYAHNVTLGELPKKEFAALASFVRAAFANDELGAKVVAERAAGFETIAHQTIGGAGERQA 539
SC RL+MPVW+ +E+F CRQ +Y + P +++R+ K GG+AR V S+ +++ A + DL ++ + S + SG LLH +T + DF S Y L K+ L F+ A+ + ER FE +A + G +A
Sbjct: 287 SCKRLYMPVWTQEEIFRCRQLMYSNTPVEIVKDRYLKWGGIARYVLRYAMDSEKQEELDQAIAKADLKMILSV-----------SVESSGVESDFCHRLLHFRVNWKT-LRNEAFDFGSVYIAQKVFATLYKRTRRDLIDFIAASHQLSDFAG----ERGIFFERLALSMLSQGGSFEA 449
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: A0A1Y1ICI3_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICI3_KLENI) HSP 1 Score: 54.7 bits (130), Expect = 1.720e-5 Identity = 40/135 (29.63%), Postives = 61/135 (45.19%), Query Frame = -2
Query: 171 FMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAVY-DAKKLSQVCLKMESAASNMDL-----GVLQQILSRGFD----------DADRFSTDRSGDALLHLSPIPETGFEESSVDFASEYAHNVTLGEL 527
++PVW+LDEL +CRQ YPHV + +RF + GGV R+V D + + + SA +DL L+ + F D R + R GD + + + G + VD A N +GE+
Sbjct: 362 WLPVWTLDELLDCRQRFYPHVSQKQTEDRFEQFGGVVRSVLADPGRSFERLARSLSALEAVDLYRLGAAALKSAIRHAFAHIEATQDLEFDGFRLGSPRIGDLVFQRA---KEGRWQDLVDLLHAAASNPRVGEM 493
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: M4BV81_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BV81_HYAAE) HSP 1 Score: 53.9 bits (128), Expect = 2.690e-5 Identity = 43/134 (32.09%), Postives = 63/134 (47.01%), Query Frame = -2
Query: 135 LFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAVY-DAKKLSQVCLKMESAASNMDLGVLQ-QILSRGFDDADRFSTDRSGDALLHLSPIPETGFEESSVDFASEYAHNVTLGELPKKEFAALASFV 530
LFMPVW+ +E+F CR+ +YPH P + E + + GG+AR V A+ Q L E+ A +L + SRG + ALLH E F + AS+Y + G L K++ L F+
Sbjct: 196 LFMPVWTKEEIFRCRELMYPHTPVAIVDECYRRWGGIARYVLRHAEDPQQQGLLGEAIARIQLKAILDASVESRGDEGV-------LSHALLHFRIDRE--FSKECFTLASKYVTDGVYGTLYKRDKKELMKFL 320
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Match: M4C4W8_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4W8_HYAAE) HSP 1 Score: 53.9 bits (128), Expect = 2.730e-5 Identity = 49/179 (27.37%), Postives = 77/179 (43.02%), Query Frame = -2
Query: 24 SC-RLFMPVWSLDELFECRQAVYPHVPETDLRERFGKVGGVARAVYDAKKLSQVCLKMESAASNMDLGVLQQILSRGFDDADRFSTDRSG------DALLHLSPIPETGFEESSVDFASEYAHNVTLGELPKKEFAALASFVRAAFANDELGAKVVAERAAGFETIAHQTIGGAGERQA 539
SC RL+MPVW+ +E+F CRQ +Y + P + +R+ K GG+AR V S+ +++ A + DL ++ + S + SG LLH +T + DF S Y L K+ L F+ A+ + ER FE +A + G +A
Sbjct: 46 SCKRLYMPVWTQEEIFRCRQLMYSNTPVEIVEDRYLKWGGIARYVLRYAMDSEKQEELDQAIAKADLKMILSV-----------SVESSGVESDFCHRLLHFRVNWKT-LRNEAFDFGSVYIAQKVFATLYKRTRRDLIDFIAASHQLSDFAG----ERGIFFERLALSMLSQGGSFEA 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1343.1 >prot_P-fluviatile_contig12.1343.1 ID=prot_P-fluviatile_contig12.1343.1|Name=mRNA_P-fluviatile_contig12.1343.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=136bp LLRILTLNACRSPAPPIVWCAIVSNPAARSATTLAPNSSFAKAARTKLASback to top mRNA from alignment at P-fluviatile_contig12:419753..420292+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1343.1 ID=mRNA_P-fluviatile_contig12.1343.1|Name=mRNA_P-fluviatile_contig12.1343.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=540bp|location=Sequence derived from alignment at P-fluviatile_contig12:419753..420292+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:419753..420292+ >mRNA_P-fluviatile_contig12.1343.1 ID=mRNA_P-fluviatile_contig12.1343.1|Name=mRNA_P-fluviatile_contig12.1343.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=816bp|location=Sequence derived from alignment at P-fluviatile_contig12:419753..420292+ (Porterinema fluviatile SAG_2381)back to top |