mRNA_P-fluviatile_contig11.981.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.981.1
Unique NamemRNA_P-fluviatile_contig11.981.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:51472..56127 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2322
Cds size432
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.981.1prot_P-fluviatile_contig11.981.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 51804..54569 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815430.720012-UTR-P-fluviatile_contig11:51471..518031622815430.720012-UTR-P-fluviatile_contig11:51471..51803Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 51472..51803 +
1693561824.047894-UTR-P-fluviatile_contig11:51471..518031693561824.047894-UTR-P-fluviatile_contig11:51471..51803Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 51472..51803 +
1622815430.7596817-UTR-P-fluviatile_contig11:54569..561271622815430.7596817-UTR-P-fluviatile_contig11:54569..56127Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 54570..56127 +
1693561824.0829246-UTR-P-fluviatile_contig11:54569..561271693561824.0829246-UTR-P-fluviatile_contig11:54569..56127Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 54570..56127 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815430.7348897-CDS-P-fluviatile_contig11:51803..521061622815430.7348897-CDS-P-fluviatile_contig11:51803..52106Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 51804..52106 +
1693561824.064412-CDS-P-fluviatile_contig11:51803..521061693561824.064412-CDS-P-fluviatile_contig11:51803..52106Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 51804..52106 +
1622815430.7472563-CDS-P-fluviatile_contig11:54440..545691622815430.7472563-CDS-P-fluviatile_contig11:54440..54569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 54441..54569 +
1693561824.0736527-CDS-P-fluviatile_contig11:54440..545691693561824.0736527-CDS-P-fluviatile_contig11:54440..54569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 54441..54569 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.981.1

>prot_P-fluviatile_contig11.981.1 ID=prot_P-fluviatile_contig11.981.1|Name=mRNA_P-fluviatile_contig11.981.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=144bp
MPLQTRPKTQESNNNDDDNDDNAPPLWIIGSVSWRRRVQLGVERVIHDPG
SEITKRAIASLISNGELSGYVYECNSVFPGGGDVFLVDARQLADGGLAHI
QTLIARNNATGEQATIRRTWERVHFTQNDFQRLHGLSGLIAEE*
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mRNA from alignment at P-fluviatile_contig11:51472..56127+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.981.1 ID=mRNA_P-fluviatile_contig11.981.1|Name=mRNA_P-fluviatile_contig11.981.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4656bp|location=Sequence derived from alignment at P-fluviatile_contig11:51472..56127+ (Porterinema fluviatile SAG_2381)
CCTGTGCTTCATTCATATATTGCCTACTCAATTAATGCACAAAGAGAGGC
ACCTTCAAAGAGTTGTGCGCAATGGCCTAAATCAACGATATTCTAATGTG
GCACTCACTTCGATGGCAGGAAGTTTGTACCCTCATTTCTGCCCCTTCGA
GACGGCGGGTCCTGTTTTTCCGAGAATCTCCCCGACGAACACAGCAAATG
GTTCACAGACCTTGTCCGTGTCAATGCGGCGTTTAATTATTGATTCGTGC
ACGGGGTCATTGTACCCCGTGCAGGATTGGAGTAAACAGGAAGAGCACCC
GCATCGTGCTGACTCCCTGTGTGTCCCGGTTGATGCCACTGCAGACCAGA
CCAAAAACACAAGAAAGCAACAACAACGACGATGACAACGACGACAATGC
ACCTCCCCTGTGGATTATTGGTTCTGTCTCATGGCGTCGCAGAGTTCAGC
TAGGTGTGGAGAGAGTGATCCATGATCCGGGCTCCGAAATCACCAAGCGA
GCAATCGCGTCCCTCATCAGCAACGGGGAGCTGAGCGGCTACGTCTACGA
GTGCAACTCCGTTTTCCCCGGCGGCGGCGACGTGTTTCTGGTGGATGCCC
GACAGCTCGCCGATGGGGGACTCGCCCATATCCAGGTTCGTTGGGGTCGG
AGAATAGCTCGATTTCACGCTACATGTGCACACGAGGACTGGGGGGCTTG
CTCGTTATTGATGTCGCCCCATCGTTGCAGATCTGGCGCGAGTGTTTTTT
CCTCCGCGATGTGCGCTGTAAGCGTCGAACCGGCGGGGATAACGTGGATG
GAAGTAAGGTGATCAATTGGAGTTCTACTTTGAGGTTGTGGGCAGGGGTG
CCGCCTGCGAAAATCCATTGACAATACCTGAAACCAACGGCAGCTCAAGG
GTTGTCATCCTTGGAAGGCAGCGACAGTCTGAAAGAGCAGGTGCTTAGTG
CTGCGTTGGCTTGGTTCGGGCCCAAATCCGCCTGGAAGTTCTGCGGCACG
CAACTGGGTAAAAATGGATTGCGGGGTATGTGACCGTCAAGATGGGGACT
TGAAGGGTCCGCGTGGCGAACCGAGAAAATTCGAACTACCTCGAAGCTAA
CCAAACTGGAAGTCACGGACAAATGGAGCGTGGTCCGACTTTCCTTTGCC
GCCGGCTTGCCTGGCTCGAAGTGCGAGCGACAGTTTTTGCCGTTTCTAGC
AGGTCGTCTTGGATGCTCCGGGCAATGTGTGCGGAAATAGTATCTGGGCG
AACAAACGTGGGGCGAGTGTTTGCGCTTCAACGACAGCGGCATCTCGTCC
ATCTAGGGAGCTGTTATCGAGGTCGTCTGCGTTCACTTTGATGCATGAAG
GCGGCTGACTTGTAATCTCACGCGGGGGCGTACTCATGTTTTGCATGCCT
TAGTTGTTAGACCATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTC
CCGCAGGATCGATCACCGATGGCCAGTCGTTCCTACTTTGCCACAAGTGG
CTCAAAAATGTTTTCCCTAACCTGTCCACTTTATACCTGTCCTTCCTGGG
CCACATCTTACACCCGAGTACCGCTACCGTCTTCTCTGTGTTCCATGCCT
CAAACATCTCTCTATACCGACTGTCTACTTTTTCCAGCTCAACCATGTAC
CCTTCTCTCTCCTGATCGTATAACGGGCATTCCGCAACTACATGTACCCG
GTCTTCGCATTCGGGGCCGCAGTCACATTTGAACTTGTCTTCGTCGTCGT
CTGCCTTCCTAAACCTCCTTCTACGTTCCCGAAGGTCAATGTCGCCCGTT
CTAAATTTGACCTTCATCTTTGTCCCTTCATCCAATGGTCCGTTCAGGTA
CTCCTTGAACCCTATTCCTTCGTTCAGCCTTCCGTACACTTCTAGAACCT
CCTTTTCCTTGGTCTCTTTCCGCAAGCTCTGATCTTCTCTATTTTCAAAG
GCTTCTGAGATACTCTTCTTGTACTCTTCTAAGCTTTCCGCTCCCATCGT
CTCCCGTCCGTCAATATCTAATCCACTCCACACTCCCTGTACAACCTTAG
CCAACTCAATGGGTTGTCTACCCTTGGCCTTGTTTACCCATCTCGCCTCC
CAAGCTATTCTCGGTAACCTCTCCTTTCCCATGTTTTCAATACGGTGTTG
TCATGTCAACTTCCTTCTGTCTCTTCCCGTTCTTAGGGAGTTAATCCTCG
ACTCTGCTCTTACTGCTGCGTTACTTGTGCGCTGCGAGCATCCTAGCATG
ATCTTTGCTGCTTTCATCTGCGCTGCCTCCAACTCTGCTACTATTTTCTT
GCTCCCTTCCCAAACTTCTCCCGCGTACTCTAGTGGCGGGATGATGAAAC
TTTTCAGAATGGTCATTTTGACGCGTGTATCAAGGTGCCGGTCTGCTAGG
ATCGGGTGCAACTTCCCTGCCCTTGCTTTGCCCTTGTCCGCTATTTCTGA
CGCGGGGGGGGGGCGACATTCTCTGAGAGCAGATCAGTCCCCCTCAGGGG
ACCATTTTTTGTGCTTGCGTGCGTACACGTTCTTGTGTGCCTGCCCACGT
TTCGATATCTCCATGAAGATACGACTGCTATGTCGGGTTGAAAAGAGGCA
GAAAGGCTTTTTGTGCACTCTCTGAGCGCAAGAGGAATGAAGCATCGTTT
TTTTTTCTGCTGTGGTAGGCAGATTTTGTGCTATATGGGTGTCAGTGTTT
GCCGCACAACTCTCCAGATCGGTACTTTAGTTTCCCGACGTAGGTGCTTG
TTTCACACCGTCATGGCATTCTTTTTGCCCGGGTCACTTTCCATGTTCTC
GCCGCCTGTAACTTTGTCTATCCTTGCCTTATGCCAAAATCGAATTCGTC
GTCATTTCCCCCCCGGCCACTCCCCTGACCTATGCCGCCTCCTCGGTTTC
TGCCCGTTTCATGAATCGTGTTGATACTATTGTTCACTTCCGCCATTTTT
ATCTTTTCTTATGCTTCAGACCCTCATCGCGCGGAACAACGCCACCGGCG
AGCAGGCCACCATCCGGCGCACCTGGGAGAGGGTGCACTTTACCCAAAAC
GACTTTCAGAGGTTGCACGGGCTGAGTGGGTTGATCGCCGAGGAGTGAGC
AACGAACGCTCCAGGATCCACAACGTCGCTCCGTTCGGCGGTACGCTGCT
AAAGAAACAATCACCAACTCCAGGCGCGCGCTTGTGAGCCCCTGAACCCG
TTACCTGTCCTTGTTGTGTGCAGATAGATGCCAATTTTCCATTGGATGTT
TCGATGGCTGTTCCTGTTTTTTCCCAGAAAATAGCAAAGAAGCTGGTGAC
ATTTCCTAAGTGTTTGGCGCAATTCTAGTGGAGATAGAATCGTGTTTCTT
TTGGCCGATGAAGTGTGAGGCGGGTGTGATTCTTAGTGTCCCCGGGGATG
AGGAGGGCCCTGTACGATAGCCACAAGCCTAAACCGTCTTCGCACGGGTG
CTTTCCGCTCCTTCTTGAGAATTCCATCCCAAACTCCTTTTGTCGAAGGG
CCACACGGGTAGAAATTCTACATGACTTGATTATGAAGGTTGTCGTTCCC
TTATAAATGTGGCGTAGCAATAAGTTTATGCTGGCTCAATAGAAATATGG
GGATTGATTCATTTCGTCGTTTTCAACGGGGGCAGCTACTGCCCGCGGTC
GGAATTTGCTCACGAGTATGTGGACTGTGAACTCAACAGAACAACCTGCC
TGACTTGTCACTTTGTTCTTCTAACCTGGCATGCAAGGTTGGATTTCCGT
TTTGCGGAATGTTCGCCGCGAGAGAAGTAGTCGTGAAGGGTGCTGCAAGC
ACCACGGCCCTTCAGACTTCCACATCTCCTAGAGCACGAGGTATAATTCC
GGTGCGTATTGTAGTCAGTCGTGCATATTTTCCAAGAATACATACACAAT
GGCGGATAACTTTTCAGGTTGCACGTCTTCCTTGGTTTTAATGCTTTCCC
CCTCTCCTCGATGATGAAAATATTTTTTGCTCTGCAGCAATATCTTCGAA
AATTCTTGAGGGTTGTTCTATGCAGTTCAAGAACGATATCAGGTGCTTGG
TTTGTTTTGTTGCCGTCAGATCGGGACGTTTTCATGGCTGCTTGTGCATC
AGTGTTCCAACTTTGAATGTTATCGACTTCCCATTGGGTCGCCGGCCGGC
TTTTGGGAAAAGTTTGATAATTTCACGTGGATTTTTGCCAGTTTGGATTG
GCTTGGGTCAATGCGCAGGTGGTGAGGAATACTAATCTAGGGGTACTCGG
ACGGTGCAGCAGCATTCTGAAAAAGCATGTCTTATGAAACAAAGCGTCTG
TATCATCGTTGACTTTTCTGCCCAGTATTTCTTTTCCACAGCTATGCAGT
GTAGATGTATCAAACCGTATGCAGAATATGCAGTCCCGATAGTTCCAATG
ATTTGCTGGCATGAAAGATGTGATGGCGTAAAAATAAGCAAGGCTTGCAG
AGATTGTATGCGATCCTCGACATTTTCTGACGTGTTTAACTTCGCTTACC
GATCACTTAAAGAAGAAATTGCAATGTGTTGGATGAGGCCTCCTCTTCCC
ACAGGAGAACCTCACTCCAGGATAGCACACCGCGCTGGGTCTGTTGACTG
CCGGAATCAGGCACAGCGTCGCTCGTGCGCAAGCACGTCTGCGCCTAAGG
ACCCCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:51472..56127+

>mRNA_P-fluviatile_contig11.981.1 ID=mRNA_P-fluviatile_contig11.981.1|Name=mRNA_P-fluviatile_contig11.981.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=864bp|location=Sequence derived from alignment at P-fluviatile_contig11:51472..56127+ (Porterinema fluviatile SAG_2381)
ATGCCACTGCAGACCAGACCAAAAACACAAGAAAGCAACAACAACGACGA
TGACAACGACGACAATGCACCTCCCCTGTGGATTATTGGTTCTGTCTCAT
GGCGTCGCAGAGTTCAGCTAGGTGTGGAGAGAGTGATCCATGATCCGGGC
TCCGAAATCACCAAGCGAGCAATCGCGTCCCTCATCAGCAACGGGGAGCT
GAGCGGCTACGTCTACGAGTGCAACTCCGTTTTCCCCGGCGGCGGCGACG
TGTTTCTGGTGGATGCCCGACAGCTCGCCGATGGGGGACTCGCCCATATC
CAGATGCCACTGCAGACCAGACCAAAAACACAAGAAAGCAACAACAACGA
CGATGACAACGACGACAATGCACCTCCCCTGTGGATTATTGGTTCTGTCT
CATGGCGTCGCAGAGTTCAGCTAGGTGTGGAGAGAGTGATCCATGATCCG
GGCTCCGAAATCACCAAGCGAGCAATCGCGTCCCTCATCAGCAACGGGGA
GCTGAGCGGCTACGTCTACGAGTGCAACTCCGTTTTCCCCGGCGGCGGCG
ACGTGTTTCTGGTGGATGCCCGACAGCTCGCCGATGGGGGACTCGCCCAT
ATCCAGACCCTCATCGCGCGGAACAACGCCACCGGCGAGCAGGCCACCAT
CCGGCGCACCTGGGAGAGGGTGCACTTTACCCAAAACGACTTTCAGAGGT
TGCACGGGCTGAGTGGGTTGATCGCCGAGGAGTGAACCCTCATCGCGCGG
AACAACGCCACCGGCGAGCAGGCCACCATCCGGCGCACCTGGGAGAGGGT
GCACTTTACCCAAAACGACTTTCAGAGGTTGCACGGGCTGAGTGGGTTGA
TCGCCGAGGAGTGA
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