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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 166 |
| Cds size | 141 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815424.5665762-CDS-P-fluviatile_contig11:45128..45211 | 1622815424.5665762-CDS-P-fluviatile_contig11:45128..45211 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig11 45129..45211 + |
| 1693561802.864804-CDS-P-fluviatile_contig11:45128..45211 | 1693561802.864804-CDS-P-fluviatile_contig11:45128..45211 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig11 45129..45211 + |
| 1622815424.5777042-CDS-P-fluviatile_contig11:49658..49716 | 1622815424.5777042-CDS-P-fluviatile_contig11:49658..49716 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig11 49659..49716 + |
| 1693561803.9270647-CDS-P-fluviatile_contig11:49658..49716 | 1693561803.9270647-CDS-P-fluviatile_contig11:49658..49716 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig11 49659..49716 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815424.5903003-UTR-P-fluviatile_contig11:49716..49741 | 1622815424.5903003-UTR-P-fluviatile_contig11:49716..49741 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig11 49717..49741 + |
| 1693561803.9404492-UTR-P-fluviatile_contig11:49716..49741 | 1693561803.9404492-UTR-P-fluviatile_contig11:49716..49741 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig11 49717..49741 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.980.1 >prot_P-fluviatile_contig11.980.1 ID=prot_P-fluviatile_contig11.980.1|Name=mRNA_P-fluviatile_contig11.980.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=47bp
LEGAKVTLGWTYPQRKSHAGEGYLGKKRPRYDGPTASSFGRVELAA* back to topmRNA from alignment at P-fluviatile_contig11:45129..49741+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig11.980.1 ID=mRNA_P-fluviatile_contig11.980.1|Name=mRNA_P-fluviatile_contig11.980.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4613bp|location=Sequence derived from alignment at P-fluviatile_contig11:45129..49741+ (Porterinema fluviatile SAG_2381)
CTGGAAGGCGCGAAAGTCACCCTGGGGTGGACTTACCCCCAACGTAAATC
CCACGCAGGCGAAGGATATCTGGGCAAGAAACGGTGAGTGAGGAAGAAAC
AGACAGCAGACAGAGAGAAAGAGACAGAGAGCGGGTCAGAGACACAGAGA
CATGGATACATAGAGAGAGAGGGCGAGAGAGAGAGAGAGAGAGAGAGAGA
CAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACAAACAGAGACAGA
GAGAGAGAGCGGAAAAGGAGCGCACCCACCGCGAGGAATTTGCTCCACAG
ATCTCCTGTTGCTCTCCTGTAGAAACAAAAAATGGTAGGCAGCCTAAAAT
GTGCTTGAAAGAGGACAAAAATGCAGTTGTTGTGGACAAGCCCCGGTCGT
GGGTTGTGCGCATAGTGTATGACCGTTAAAGGAGTCTTCATGTATGTGCA
GGAGTGTGCGAGAGAGAGTGTATCTTCTTCCCAGTCAGCCTGTTTTTTTC
TTGTCTCGTTCCACCCGAATTTGGAAGCACTTCCACTGCGTTTTGGGATT
GTTTATATTTTCACGTGCCACGTCGACACACGGCGCTTTCCGCAGTATCT
TTTAAGCAGACGGAGTTAGCCCGGTGGTGGTTGATAACGGAGTAGGAGAA
ACACACACCACCGATAGGTATCGCGTCAAGTACCGGGTGACGTCTGCAGG
TTTTTTCGTCCACAGCAGGAGGCCTTCATTGTATTATTACACATAGACTA
CTCATCAATGGGCAGGCATTCAAAAATATCCCAAACAAGGATGGTCTACA
AGCTCATCAATATCGGGCCCGAGCGAAAAGTCTGGCGTCATCAATCAGAC
CAATCAGACCAATCAGTCAATCACGGGGAATTTGAATTTTGCATGCCGTA
GTCGTGAGACCATTGACCTCGCATCCCTACGAAGCCGGGACGGAGCACGC
CGGGTTTTCGCCGCACCAGGCTCGCATTCACCAAGCGCGAAGCGCCGTAG
TTTTTTCGGCGAGTCGCATGAAGAGCTGCATCGTACGAAGATTGTTCCGC
TCAAGCGTACTTAGTTTGGACTAGTCTTGCATCGTCTAGTCTATAGGTTA
CAGCCTCGGATGGGTTCGTTGTGTTTTCTGGTCCTCCCCACTTTAAGAGA
CAGTCATGGGTTCGTACTATGCAACTGCCTCGTAATAGGTGCGTGACTAT
TTTACACTACGTGGTACGATCATCCTCAGTTGTGCGGCGTTGGGTTATCC
ACCCGCACAACATGATCTACTCGAGCATCACAGTTACCCAAAAAAGGCGC
AATACGGGAAAAAAAAGCGGAAACCTGGTGGCCCAGCTCACGTCATGAAG
TGTCGTGTTTTAAAGCTTCGTTGCCAACTCGAAGCCAAGCCAAGCCAACC
CCGTTCGCGCCATCCGCCCGGTGCATCGCTTTCGAGAGCGTTAGGGGTGG
CGGGGGCGGGGGGGGAGAGAGAGAGGGGGAAAGCAAGAACGGAGACGCGG
GTTAGCAGAGGTGGGTCTGTTGCATCTCAGTCACACGCGCGCGCTCCGCG
GATCCCTTGGATCCCTGCACGCGTCCACACCCACCCACGCCAGATGACTT
GAGGCGTTCAATCTAATTATCTTTATCTCCAGCCTATCTTTGCGTGTAGG
GTCGTGCCCCACCTGTTCCCTAAGCTCGTGATTGAAAATGAGAAGAGTGT
GACGCTGTTGGGCCTTTCTCTCCTTAACTCCCCGCAGGTTGTGTCAGCAG
GCCGCGTCTCTTCACTTACGTTTGTTTCCCCCCCCTAAATCTGTTCCCTC
CCACCCCAAAAAAAGCAGAGGAGGGTATTTATTACTTGCGACGGTTGCAT
ATCGTGCGCGCGCGTGTACCCTACTCGCGGGACACCCATTAAGTTTCGAA
GTGTGCACGATGATATATGCTGATTATTTTCTGTATTGAGAGTACGGCGT
TGTTCCATCGTCAAGGGACCAATCCCTAACCCATGGATATACGAACCGCG
CACGTACCACGCGTTTACCGCAGCTGCCTGACGGCTGGCTTGTTGACCAT
GGCGATGTTTTTTTTCATCTACATTAGCTTGCTCCGAAACCTGTACTCGA
GAAATGGATGTGATCTCCGTGTTGCGCACGTGCACTGTCGTCCGGCGGGG
GTCCGTTACAATCCTTAGGTCGATTGGTGGTGGATGGGCAAAGGGGGATG
GCGCAACTTGAACAGAGGGTCTGGCAGACAGAACGTACGTTTCTTTCATC
CTAGGTTTACCAGGTAGGTGAGAGTTTAGTCTCTCCTTACAGTGCGCGTA
GACAAACTTGCTCTTTTCCACCGGTGGTTTAGGTTTGTCGCCATTTCTTC
GTAAGGTTTCACAGCTGGTGGAATGGGAAAAGCAGGTCGACTTCGCCTCG
CGTGTGATAAAGAAAATGTGCGAAGGGCAGTCGCAGGTAGGTGCGGTAGA
AGAGGCCGTGACTGGCCTGTCTCGGAACGCCGAAAAAAGTGCCGTTTGGG
AAAACCTGGATTGAATTTTTGGACTCGGTTGGAGCTGGGAGCTCTTCCGT
GGGACCCCCAAGCGACATGATCGACACGTCATACACTGATACACTTCATC
CCCAACTGTGAATCTCCATAGAACTGCAAACACAGCAGAATCAATCAGAG
AGTGCTGTGAGTAGACTATGTCTGTAAGCCCCCCTACTCGCGACACGAAC
TTGATTCCAGAATCGCACGTTTCCGAAGACTACGCCGACCTGAAATACGG
AAATTCCCATAGAAACAATTGCAGTACAAAGATCACACCGAAAATCCCGA
ATAGTATCAAACCGAACGAAAACATTAATATGACGAAACACTGCCACATT
CGAAATAAACCAACGTAACACGTCAGAGGTTCATGACGTGTTTGCGGTGG
AACTCGAACGCCTTCGCGGGCACTATTTTCTTGAGGAAATCCGCGCCCTC
CAACTCAAATGACACACGGATTACCGAAATCCCCTTCCCCTCTACAACGT
CACGCAGGAACTTGTGTCTCACTTTGATGCGCTTCGTGTTCGAGTTCGAG
ATAGGTTTGTTCGCAAGCTGAATCGCCCCCTTTTTGTCGTCTAAGACAAG
GGTGCACGGCAAATCAACCTTCGGCAACATGAAAAACGCCACACGTCCCT
AAGGAACAACACTCCCTCACGACGCCACCTAACGCCACGTACTCTACCCT
CGCAAGTCGACGTCGTGATACACTGGGTCCTCGAAAACCGCATCACCACG
CTTCCTGCGTAAGACACGATTCCTCCTAATACCGACCTTCGGTCTGCTGC
CTTGCTGACAAGGTCGGCATCCGCGAAAGCCAGTAAAATAAATCCCTCTA
TTATCCCCTTCTGAAAAGAGGTACCAAAATGACTAGTCGTACGTAGATGC
CCCAACACTCCAAGAGCTACCTTCCAATGCAAAAGGTTCAGGGACGCGCA
GTCCCTGGCCAATGTCCTTACCGTATTGATCATGTCTTGCTTGGCCTGGG
TGGCCAACCGCATGAGCGAGCTAATCGATTCCCAGAACGGAAACGTCACG
TTAGACTTGTCGGCGCTAAGTACGAATGCTTCAGTCCGACACGCAGGGGG
GCAGTCTTGCCCCATGTGACCCCGTACTCTTTTGCCAACTCGTCCACGAA
GTCGACTAAGAAATCGTCAGTCTACCGGCCGTTTTGTTCTCTCGTAGAAG
CACCCAGAGTATCGTCGCAACTCTCCAAGGTTCGTCACCGGCACGGATTT
GTTCAATTCCTCCCCGACATGTCACACCTTTCCTGCTCTTCTAAGATATC
ATCCACATTCACAACAAGAATCAACTCCACACGCGCATCCTCGATCAGGC
GAAACATACACGCGTCTGCCAAGCAATGTTCAAGTCCCAACGCAATCATG
GGGCATTTTTAGGGGTAACTGAAGGGAGGTCACGGTACATCCGTCACCCC
GTCACGCATTAGTATTTTTTTCATGTTAAGTATCAGGCCCTCTGTTTCTT
GATTGATCCTTGAGATCCAAGCTCTACGTTTGGTGCGAACTCGCCGTATG
CTGCGATCGAATGATGAAGGAAGCATACCGCATACCAAACTCAGGGGTAG
AGCACTTTACAAGGCTCGCGTTGAAGTACTACACCGCATGTCGTGTTTCC
TTTGAATTATCACAATTACTTTACCGGAATCTCGGTATCTTGCGCTGTAC
ATACGGTGCTTTGACGCCCACGCTTCACGCACGCACGCACGCGTTTGAGG
TGGCGTGACATGCCACATCCCGTTTTTTCAAGAATCGATGTCTTTTCAGC
AGGTCCGGCGATTGCGTCAAACGAAGCGGCGTTCTAGCGACGTTGTCCGT
AGCTCCATCTATCGGCTCATCACTCGACACTGGTCGAGATCTTTGCTGCC
GAGACACGGGCTTTCATTTCGATCCGACCGGGGTTGCGCGCTTCGCCATG
CGACCCACGAATGTTTCCTAATTCCATGACGTGGCATGTCCTATCCGCTC
CTGTTTCTTCTGTTGCCCTTTGTTCTTTAGGCCACGCTACGACGGACCGA
CGGCCTCATCTTTCGGCAGAGTAGAGCTGGCGGCGTGAGCGACGGTCGAC
AGACAGACCGACA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig11:45129..49741+ >mRNA_P-fluviatile_contig11.980.1 ID=mRNA_P-fluviatile_contig11.980.1|Name=mRNA_P-fluviatile_contig11.980.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=282bp|location=Sequence derived from alignment at P-fluviatile_contig11:45129..49741+ (Porterinema fluviatile SAG_2381)
CTGGAAGGCGCGAAAGTCACCCTGGGGTGGACTTACCCCCAACGTAAATC
CCACGCAGGCGAAGGATATCTGGGCAAGAAACGCTGGAAGGCGCGAAAGT
CACCCTGGGGTGGACTTACCCCCAACGTAAATCCCACGCAGGCGAAGGAT
ATCTGGGCAAGAAACGGCCACGCTACGACGGACCGACGGCCTCATCTTTC
GGCAGAGTAGAGCTGGCGGCGTGAGCCACGCTACGACGGACCGACGGCCT
CATCTTTCGGCAGAGTAGAGCTGGCGGCGTGA back to top
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