mRNA_P-fluviatile_contig11.977.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.977.1
Unique NamemRNA_P-fluviatile_contig11.977.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 7.560e-123
Identity = 185/220 (84.09%), Postives = 198/220 (90.00%), Query Frame = 1 
Query:   85 EGAGEMFHVRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            E AG+MF VRLDLFHALNRLSRTIKK HGAFRP MAR+RDACFLVNRD V Q EK  E RG +P QVQQ KDQ+WS FL++CRRLVPPPSELLKRFDKV+ EFG+CVDN S+EVLLRPKSMKAV +LRKHI AGCLSDPDGVAMYYAVGKT DGLV+YRCVRGTNDVEGYHRYLRTLLASYCAS ALAQSVLLEFNFRWN+K+MVKNRGLPA LGEHY Q
Sbjct:  537 EEAGDMFFVRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQ 756
[Close]
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 4.820e-101
Identity = 162/235 (68.94%), Postives = 184/235 (78.30%), Query Frame = 1 
Query:   79 APEGAGEMFHVRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQG-------------EKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            APE    +F VRLD FH LNR+SR  KK+HGAF+PFMAR+RDACFLVNRD V Q              E   E RG  PE+VQQ+ +QNWS FL+  RRLVP    LLKRFD+VI+EFG CVDN S EVLLRPK+MKAVR LRKHIE  CLSDPDG+AMY+A+GK K GL DYRCVRGTNDVEGYHRYLRTLLASYCAS +LAQSVLLEFN+RWN+++M+KNRGLPA+LG HY Q
Sbjct:  478 APEEPHGVFSVRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQ 712
[Close]
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 2.490e-80
Identity = 125/215 (58.14%), Postives = 161/215 (74.88%), Query Frame = 1 
Query:  109 VRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQG---EKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            VRLD+FHAL R+S+  KK+HGAF+PFMAR+RDACF+VN D +++    E+A   +G TPE V + KD+NW+ F++ CRRLVP    LL+RF+ VI +F   VD  S E LLRP + +AV +LRKHIE+GCLSDP+ V +YY  GK   G+   RCVRGTN  EGYHRY+R LL++YCAS +LA SVLLEFN+RWNV++ VKNRGLP  +GE + Q
Sbjct:  178 VRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQ 392
[Close]
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 1.110e-75
Identity = 125/215 (58.14%), Postives = 159/215 (73.95%), Query Frame = 1 
Query:  109 VRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQG---EKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            VRLD+FHAL R+S+  KK+HGAFRPFMAR+RDACF+VN D +++    E+A   +G TPE V + KD+NW+ F++ CRRLVP    LL+RF+ VI +F   VD  S E LLRP + +AV +LRKHIE+GCLSDP+ V +YY       G+   RCVRGTN  EGYHRYLR LL++YCAS +LA SVLLEFN+RWNV++ VKNRGLP  +GE + Q
Sbjct:  178 VRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTKSA---GITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQ 389
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BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 2.470e-74
Identity = 127/162 (78.40%), Postives = 136/162 (83.95%), Query Frame = 1 
Query:  238 QGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPAS 723
            Q EK  ECRG TP Q +QVKD NWS FLKRCRRLVPPPSELLK FDKV++EFG+CVDN S+E LLRPKSMKAVR+LRKHI AGCLSDPDGVAMYYA+GKT DGLV YRCVRGTNDVEGYH      LASY AS ALAQSVLLEFNFRWN+K+MVKNR    S
Sbjct:  836 QVEKVLECRGMTPAQAEQVKDHNWSFFLKRCRRLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGLVRYRCVRGTNDVEGYH------LASYSASPALAQSVLLEFNFRWNLKMMVKNRDWDPS 991
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BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG)

HSP 1 Score: 221 bits (563), Expect = 4.930e-64
Identity = 105/217 (48.39%), Postives = 147/217 (67.74%), Query Frame = 1 
Query:   94 GEMFHVRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            G +  VRLD FHA+NR+++T+ K+HGA++PFMAR+RDA FL+++D +     A +  G + ++++  KD +W+ FLK C RL+P   ELLKR+D V + F   +D+ + E L R  + K VR LRKHI+ GCLSD   + +Y+  G+T  GL  YRC RGTN  EGYHR++R LL  Y +S  L   +LLEFNFRWN+++ VKNRGLP+  G  Y Q
Sbjct:  430 GFILKVRLDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQGLPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGFYSQ 646
[Close]
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.600e-63
Identity = 108/212 (50.94%), Postives = 142/212 (66.98%), Query Frame = 1 
Query:  109 VRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            VRLD+FHAL R+SR  KK+HGAF+PFMAR+RDACF+VN+D +++ E+A   +G TPE V + KD+NW+ FL+ CRRLVP    LL+RF+ VI++F + VD  S EVL+RPK+M+AV  LRKHIE+ CLSDP GV +YY  G+   G+   RCVRGTN                            EFN+RWN+++ VKNRGLP  +GE + Q
Sbjct:  500 VRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNAAGITTRRCVRGTNYT--------------------------EFNYRWNIRMAVKNRGLPREVGEFFDQ 685
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BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A6H5K811_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K811_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.220e-57
Identity = 100/207 (48.31%), Postives = 135/207 (65.22%), Query Frame = 1 
Query:  109 VRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLG 729
            VRLD FH + R+++ + K HGAF    A +RDA F+VN+  ++  E+  +  G +   +Q +K ++W  FLK  RR VP P  LL RFD VI       D  + +VLL P +MKAV +LR+HI  GC SDP GV +Y+  GKT  GL  +RCVRGTN  EGYHRYL+TLLA++CAS  +  +VL+EFN RWN+   V+NRG+ A +G
Sbjct:  255 VRLDPFHGITRVTKWVPKGHGAFFLLCALLRDAIFMVNQADIKAAERVLQNEGKSAADIQNMKAKDWGFFLKNARRRVPAPEVLLARFDAVISACKDIRDAKTGQVLLSPAAMKAVGLLREHIRLGCFSDPVGVPLYFERGKTSTGLTRFRCVRGTNSTEGYHRYLKTLLAAFCASPEVCHTVLMEFNHRWNISRAVENRGMAAEIG 461
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BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.300e-52
Identity = 96/213 (45.07%), Postives = 144/213 (67.61%), Query Frame = 1 
Query:  109 VRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVD-YRCVRGTNDVEGYHRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ 744
            V+LD FHA+ R+S+ I K+HGA R ++AR+RDA F VN + +   E A    G + E+V+  K ++W  FLKRCRRL+P P+ELL+RFD V + +G  +D  +++ L R ++++A++ LR HI   C SD    A+Y+  GK  + L   +RC+RGTND+EGYH ++R LL ++C S  LA  +LLE+N+RWN++  +KNRGL  ++G  Y Q
Sbjct:  704 VKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMR-LLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQ 915
[Close]
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 8.900e-50
Identity = 89/160 (55.62%), Postives = 118/160 (73.75%), Query Frame = 1 
Query:  109 VRLDLFHALNRLSRTIKKTHGAFRPFMARMRDACFLVNRDGVQQGEKA*ECRGTTPEQVQQVKDQNWSLFLKRCRRLVPPPSELLKRFDKVIDEFGSCVDNDSREVLLRPKSMKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVE 588
            VRLD+FHAL R+SR  KK+HGAF+PFMAR++DACF+VN+D +++ E+A   +G TPE V + KD++W+ FL+ CRRLVP    LL+RF+ VI++F + VD  S EVL+ PK M+AV  LRKHIE+  LSDP GV +YY  G+   G+   RCVRGTN  E
Sbjct:  786 VRLDIFHALQRISRLCKKSHGAFKPFMARLKDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKSWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLILPKVMQAVDQLRKHIESDRLSDPHGVPLYYTTGQNAAGITTRRCVRGTNCTE 945
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q9_ECTSI7.560e-12384.093'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE4.820e-10168.943'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JPK9_9PHAE2.490e-8058.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE1.110e-7558.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M0_9PHAE2.470e-7478.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y2A9B5_9FUNG4.930e-6448.393'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV1_ECTSI1.600e-6350.94Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
A0A6H5K811_9PHAE1.220e-5748.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JET4_9PHAE1.300e-5245.073'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV2_ECTSI8.900e-5055.633'-5' exonuclease domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:25756..27551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.1
Seed ortholog evalue9.9e-46
Seed eggNOG ortholog2880.D7G3Q9
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibonuclease H-like domain
Ec32 orthologEc-00_006840.2
Exons4
Model size744
Cds size300
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.977.1prot_P-fluviatile_contig11.977.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 27090..27551 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815430.396526-UTR-P-fluviatile_contig11:25755..258391622815430.396526-UTR-P-fluviatile_contig11:25755..25839Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 25756..25839 +
1693561819.7677321-UTR-P-fluviatile_contig11:25755..258391693561819.7677321-UTR-P-fluviatile_contig11:25755..25839Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 25756..25839 +
1622815430.4165974-UTR-P-fluviatile_contig11:26484..266401622815430.4165974-UTR-P-fluviatile_contig11:26484..26640Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 26485..26640 +
1693561819.788606-UTR-P-fluviatile_contig11:26484..266401693561819.788606-UTR-P-fluviatile_contig11:26484..26640Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 26485..26640 +
1622815430.4295309-UTR-P-fluviatile_contig11:26885..270891622815430.4295309-UTR-P-fluviatile_contig11:26885..27089Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 26886..27089 +
1693561819.7992861-UTR-P-fluviatile_contig11:26885..270891693561819.7992861-UTR-P-fluviatile_contig11:26885..27089Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 26886..27089 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815430.4420245-CDS-P-fluviatile_contig11:27089..272331622815430.4420245-CDS-P-fluviatile_contig11:27089..27233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 27090..27233 +
1693561819.8070061-CDS-P-fluviatile_contig11:27089..272331693561819.8070061-CDS-P-fluviatile_contig11:27089..27233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 27090..27233 +
1622815430.4544022-CDS-P-fluviatile_contig11:27395..275511622815430.4544022-CDS-P-fluviatile_contig11:27395..27551Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 27396..27551 +
1693561821.7567763-CDS-P-fluviatile_contig11:27395..275511693561821.7567763-CDS-P-fluviatile_contig11:27395..27551Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 27396..27551 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.977.1

>prot_P-fluviatile_contig11.977.1 ID=prot_P-fluviatile_contig11.977.1|Name=mRNA_P-fluviatile_contig11.977.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=100bp
MKAVRVLRKHIEAGCLSDPDGVAMYYAVGKTKDGLVDYRCVRGTNDVEGY
HRYLRTLLASYCASLALAQSVLLEFNFRWNVKLMVKNRGLPASLGEHYRQ
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mRNA from alignment at P-fluviatile_contig11:25756..27551+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.977.1 ID=mRNA_P-fluviatile_contig11.977.1|Name=mRNA_P-fluviatile_contig11.977.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1796bp|location=Sequence derived from alignment at P-fluviatile_contig11:25756..27551+ (Porterinema fluviatile SAG_2381)
TGCCAGGGGGCGGGGCGGATCCTGATGCTTATGAAGACGACTTCTTTGAC
GCGCCAAGACCACCACAGGCTCTCTACCGCGCCGGTGAGAATACAGTCTG
TGAAGTTTTTATTTTATTTTTCGAGCAGCGGTTACAAATATTTGTGCGCG
CTGTGCCAACCCCTAGAATCAACATGTTCTAAACGGCAGATGGGGGCGTT
GAGGGCGATCTCAGCACCGATAATGAGAGCAGTGACGACGAGATCCTCGA
CGGGAGCGGGGCAGGTGGTGACTTGCCAGGCAGTGGTGGGCCCGGCGCTA
AAGGGGAGAAGACACAGGTGACTTGTTACTGCATCTTGTTTTGAATAAAG
AACACGTTCTTGTTTGGTTCCAAGAATCTTTGGCGTATTTTTGCCTGTCA
TCATGGTGTCTCTTGACTTCTTTTTTTTTTCTCTGTATTGTCGTTACTCC
TATATCGCTGTGCTGACGTTTCGGGTCCATTTTATTTCAGTGTACCTTGT
TTTAGGTAGGTTAACCTGTCACCACGTGAAATGACCGCGTCGAGTGCTGG
ATTAGTACAGAGAGATTGTGACGGAAGGAGGTACTGCATAGAGAGACCGG
GACAATTTTTAATGTGAAGATAACAACAATAGTGCCGTCTGGATTGGTAG
CGTTCTTGGGTTCTTGGGTATCAGGATGTCACCACCACGCTCGTGTTCTC
TGTACCATGCTGTACCGTCCTCGACGCAGGAAGGAGCTGGCGAAATGTTC
CATGTCCGCCTCGACCTGTTCCATGCGCTCAACCGCTTGTCGCGTACGAT
CAAGAAAACCCACGGCGCCTTCAGGCCGTTCATGGCGCGGATGCGTGACG
CCTGTTTTCTTGTCAACCGGGACGGTGTCCAACAGGTAAGTTCCTACCGC
CACAGAGCCTGAAAATACGGGTCTCAGGGCGCCTTACTATTAGTGCAGAT
GGCAGAGGAAACAGTCTTCTTAATTTTCTATTTTTTGCGTTGTTGCAGAC
AACCAGTATGGATGTCCGCAAGGTACACATTCCCAGCAAGATGTTTTGCT
AAGGTGTCATGGATATGTTTTTTGTTCTGTCTGACTGCGCCGTCCGACCG
ATGTTTTGCCCCGTGGTGCCCATTTTCCAGGGAGAGAAGGCGTAGGAATG
TCGTGGTACGACCCCGGAACAGGTGCAGCAGGTCAAGGACCAGAACTGGT
CTCTTTTCCTGAAGAGATGCCGGCGTCTTGTCCCTCCACCGAGTGAGCTG
CTGAAACGCTTCGACAAGGTCATCGACGAGTTTGGCAGCTGTGTTGACAA
CGACTCGAGGGAGGTGCTGCTGCGCCCGAAGTCGATGAAAGCCGTGAGGG
TGCTGCGGAAGCACATCGAGGCCGGATGCTTGAGCGATCCTGACGGTGTG
GCGATGTACTACGCGGTTGGCAAGACCAAGGACGGTCTCGTCGACTATCG
TTGCGTGCGAGGCACCAACGATGTCGAGGTGAGATGTTGCAACTTGAGCT
GGGAAGCAGTGTATGTACACTGGACAACCTTTGTTGGCTATCTTGACTTT
TTTTTCTCCATTGTTGTTGTTGTAGGAACGTTTCTCGATTGTGACTCCTT
TTCCTCCTCTTGCGCCTTTGCTGCTCACGTTTCGCAACAGGGGTATCACC
GCTACTTGCGCACTCTCCTGGCCTCCTACTGCGCGTCGCTGGCACTAGCT
CAGTCGGTCTTACTGGAGTTCAATTTCCGGTGGAACGTCAAGCTGATGGT
CAAGAACCGTGGCTTGCCCGCGTCGCTGGGAGAGCACTACAGACAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:25756..27551+

>mRNA_P-fluviatile_contig11.977.1 ID=mRNA_P-fluviatile_contig11.977.1|Name=mRNA_P-fluviatile_contig11.977.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=600bp|location=Sequence derived from alignment at P-fluviatile_contig11:25756..27551+ (Porterinema fluviatile SAG_2381)
ATGAAAGCCGTGAGGGTGCTGCGGAAGCACATCGAGGCCGGATGCTTGAG
CGATCCTGACGGTGTGGCGATGTACTACGCGGTTGGCAAGACCAAGGACG
GTCTCGTCGACTATCGTTGCGTGCGAGGCACCAACGATGTCGAGATGAAA
GCCGTGAGGGTGCTGCGGAAGCACATCGAGGCCGGATGCTTGAGCGATCC
TGACGGTGTGGCGATGTACTACGCGGTTGGCAAGACCAAGGACGGTCTCG
TCGACTATCGTTGCGTGCGAGGCACCAACGATGTCGAGGGGTATCACCGC
TACTTGCGCACTCTCCTGGCCTCCTACTGCGCGTCGCTGGCACTAGCTCA
GTCGGTCTTACTGGAGTTCAATTTCCGGTGGAACGTCAAGCTGATGGTCA
AGAACCGTGGCTTGCCCGCGTCGCTGGGAGAGCACTACAGACAGGGGTAT
CACCGCTACTTGCGCACTCTCCTGGCCTCCTACTGCGCGTCGCTGGCACT
AGCTCAGTCGGTCTTACTGGAGTTCAATTTCCGGTGGAACGTCAAGCTGA
TGGTCAAGAACCGTGGCTTGCCCGCGTCGCTGGGAGAGCACTACAGACAG
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