mRNA_P-fluviatile_contig11.1311.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1311.1 vs. uniprot
Match: D7FQU4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU4_ECTSI) HSP 1 Score: 616 bits (1589), Expect = 1.360e-202 Identity = 446/859 (51.92%), Postives = 530/859 (61.70%), Query Frame = 2
Query: 392 LAWDDGGEYARAAEAAGVDVGGMLEAGVDAKKLLGFVSRFHRREGDKLGLLDERNLKFATSQVLREGPRAGVDAVNAQLAGNPRSRGAPTS--------GAIPLGRANQALRRVPGRQPLQPRGGTFANPKQQQQLRHLPSGGSEAGPAVSTDGRHGGRSESARPTGGRKSAPSAPLPRRPFDQRDSSDEAETSRLCDELLRWSSALQSAEKRLGGKGRSGGFGGGAXGNGAGTIHRTRV-PIDDVLEEGSKCSTSTTENAGHERSRVDDAGVFYRGVRHEPGRPDYAREEALKYDRG---REQPDIDDDDDLVEGGXXXXXXXXXXXXXSLENNEALKDIEEGWGESELRAASFPRRGTGGGVRRSVPSSRHERPTPSYALPTKHFKALDRYRKHSMYAEDAPGQNQLHRQAHLEDENAALKLRLEGQRRAIHELEHQASTLRDDARLRQEELSELRKKISTGGATGNGRGRCPCCASTHPTRVRGMSDTGPSALKKRALAAEARTQTLERSLSESKTREQRSREIVASLKHSHSDAQAKMTRLEAELESTKESLTXXXXXLVESRRNAKVRLKATQKQRRQQGEKERDAEIARAEAAELATKLRKALRAVEKARREAIEMREDKARLESESQIVVRENRMLRDRLSDGKVWSKARERDRWILAELRS--DSRSPARRS----------PQKASHASFRRQPAPSPGFRTQANLGRR--LGAAKAPLDSISISDSS----DAAGVPRDG-EDGREEGAGGRVLRPRDSRPVRDTRSTTGEAPGAWSRAVGGLSTRSIDGNVGVTAEGRRDDAAIFRGS-TLSGVSARSSTMGARYEKLQAMYRRVNRRDGGSRGRAGV 2872
LAWDDGGEYARAAEAAGVDVGGMLEAGVDAK LL FVS + + EGDKLGLLDE+NLKFATSQVLR+GPRAG N R R PT+ G G ++A RR Q + R T NP+ +Q R + H TGGR SAP A F + D ET+RL ELLRWSSAL+ AEK+LGG G G G A H + P +D EEGS+ ST + + E D + RP R E + DR R + D+ + V G + E + D+ E W ESE A R GG VR S+ + H RPTPSYALPTKHFK DR R+H++YAEDA GQ Q+ RQAHLE+ENAALKLRLEG RRAIHELEHQA+TLRDDAR+R+EE S L+KK++ ++ G G+C CCASTH R + + GPSALKKRALAAE RT+TLER L ESK +EQRSREIVASLKHS+S AQAK LEAELEST+ SL+ +VESRR AK RLK T+KQRRQQGEKER+AE ARA+AA+LA KLRKA R +E+AR EA+++RE+KAR+E ESQ + RENRML+DRLSDGK+ S+ RERDRWILAELRS SRSP+RR P AS + R++ FR + + RR LG A DS S S+ S + P G +GR EGAGGR L PRDSR V + G +PG W GLSTRS DG AEG DAA+ RGS TLSG SA + TM ARYE+LQAMYRRVNRR+ G+RGR+GV
Sbjct: 5 LAWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGDKLGLLDEQNLKFATSQVLRKGPRAG----------NQRPRRPPTTATGTSSAWGFGTQGETDEASRRAVDCQSRRTRKRTSPNPEVRQSARV----------GIGNGNTHR--------TGGRPSAPVA------FGEDDG---VETARLRSELLRWSSALEGAEKQLGGNGGPAGMESWTGGGIARARHVAKAAPAEDAKEEGSEQSTPSRQVDDDESFDSDQEDATHHD------RPASTRVEERRNDRSDTRRSRRQRDEGEGEVSGDRDRHRSH---------SPEVVDDVVEVWEESEGEPACSSSRRPGGRVRGSISTYGHARPTPSYALPTKHFKTPDRDRRHAVYAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLRDDARIREEEFSRLKKKLAATPSSVAG-GKCSCCASTHHGRQKAAGENGPSALKKRALAAEGRTETLERCLRESKAKEQRSREIVASLKHSYSAAQAKAVSLEAELESTRNSLSEARQEIVESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIERARLEAVKLREEKARVEGESQDLARENRMLQDRLSDGKLRSRTRERDRWILAELRSHSQSRSPSRRRAEGQDSRRDPPPTASRPAARQRSLTREDFRARNDGVRRRHLGVQDASFDSASDSEPSVRCRSLSPPPNPGLGEGRAEGAGGRWLPPRDSRRVPCVQGRVGGSPGGWGGTGRGLSTRSADG-----AEGPPGDAAVLRGSSTLSGGSA-NGTMKARYERLQAMYRRVNRREAGARGRSGV 804 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1311.1 >prot_P-fluviatile_contig11.1311.1 ID=prot_P-fluviatile_contig11.1311.1|Name=mRNA_P-fluviatile_contig11.1311.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=888bp MDSSDQGEDSFLVEFLNPAGRLGHGRRPAAAATAGDDDTDRRDSTTMAFDback to top mRNA from alignment at P-fluviatile_contig11:3676855..3694504+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1311.1 ID=mRNA_P-fluviatile_contig11.1311.1|Name=mRNA_P-fluviatile_contig11.1311.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=17650bp|location=Sequence derived from alignment at P-fluviatile_contig11:3676855..3694504+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3676855..3694504+ >mRNA_P-fluviatile_contig11.1311.1 ID=mRNA_P-fluviatile_contig11.1311.1|Name=mRNA_P-fluviatile_contig11.1311.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5328bp|location=Sequence derived from alignment at P-fluviatile_contig11:3676855..3694504+ (Porterinema fluviatile SAG_2381)back to top |