mRNA_P-fluviatile_contig11.1296.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5JMC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC7_9PHAE) HSP 1 Score: 204 bits (520), Expect = 6.120e-62 Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 3
Query: 78 DIGELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
++ ELKYDPAD RYP G++GK LLWGAS+AGPLRHGLE GRTRKQTREM G E PG GET DP+EALLAT+LETGG IV++YICNSLVKE+W+EEQTRRMEEM RRE+Q+VLG ++Q F AEV SGSSQP PDPQL
Sbjct: 136 NLEELKYDPADDRYPRGLEGKKLLWGASNAGPLRHGLESGRTRKQTREMQGVGEMPGAGETSDPQEALLATILETGGTGIVEDYICNSLVKEQWDEEQTRRMEEMYRREMQEVLGPKQQTFGAEVDASGSSQPLPDPQL 274
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5JMP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP4_9PHAE) HSP 1 Score: 197 bits (501), Expect = 3.670e-61 Identity = 103/139 (74.10%), Postives = 117/139 (84.17%), Query Frame = 3
Query: 78 DIGELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
++ ELKYDPAD RYP G++GK LL GA +AGPLRHGLE GRTRKQTREM G E PGPGET PEEALLAT+LETGG IV++Y+CNSLVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGS QP PDPQL
Sbjct: 48 NLEELKYDPADDRYPHGLEGKKLLCGAWNAGPLRHGLESGRTRKQTREMQGAGEMPGPGETSYPEEALLATILETGGTGIVEDYMCNSLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSLQPLPDPQL 186
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE) HSP 1 Score: 210 bits (534), Expect = 6.390e-61 Identity = 107/139 (76.98%), Postives = 120/139 (86.33%), Query Frame = 3
Query: 78 DIGELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
++ ELKYDPAD RYP G++GK LLWGAS+AGPLRHGLE GRTRKQTREM G E GPGETPDPEEALLAT+LETGG IV++YICNSLVKE+W+EEQTR MEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQL
Sbjct: 58 NLEELKYDPADDRYPRGLEGKKLLWGASNAGPLRHGLESGRTRKQTREMQGAGEMSGPGETPDPEEALLATILETGGTGIVEDYICNSLVKEQWDEEQTRHMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQL 196
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5L1D0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D0_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.020e-60 Identity = 103/135 (76.30%), Postives = 115/135 (85.19%), Query Frame = 3
Query: 87 ELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQ 491
ELKYDPAD RY G++GK LLWGAS+AGPLRHGLE GRTRKQT EM G E PGPG+TPDPEEALLAT+LE GG IV++YICNSLVKE+W+EEQ RRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQ
Sbjct: 105 ELKYDPADDRYSRGLEGKKLLWGASNAGPLRHGLESGRTRKQTWEMQGAGEMPGPGQTPDPEEALLATILENGGTGIVEDYICNSLVKEQWDEEQIRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQ 239
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5JNJ1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ1_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.480e-60 Identity = 104/136 (76.47%), Postives = 116/136 (85.29%), Query Frame = 3
Query: 87 ELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
ELKYDPAD RYP G++GK LLWGA++AGPLRHGLE GRTRKQTREM G E P PGET DPEEALLAT+LETGG V++YICNSLVKE+W+EEQTRR EEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQL
Sbjct: 107 ELKYDPADDRYPRGIEGKELLWGAANAGPLRHGLESGRTRKQTREMQGAGEMPRPGETTDPEEALLATILETGGTGTVEDYICNSLVKEQWDEEQTRRTEEMYRREVQEVLGPEQQAFGAEVDASGSSQPLPDPQL 242
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5K1G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G4_9PHAE) HSP 1 Score: 204 bits (519), Expect = 3.590e-60 Identity = 105/139 (75.54%), Postives = 119/139 (85.61%), Query Frame = 3
Query: 78 DIGELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
++ ELKYDPAD RYP G++GK LLWGAS+AGPLRHGLE GRTR QTREM G E GPGETP P+EALLAT+LETGG IV++YICNSLVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQL
Sbjct: 325 NLEELKYDPADDRYPRGLEGKKLLWGASNAGPLRHGLESGRTRYQTREMQGAGEMSGPGETPVPKEALLATILETGGAGIVEDYICNSLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQL 463
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5L0R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R5_9PHAE) HSP 1 Score: 192 bits (488), Expect = 7.690e-58 Identity = 102/139 (73.38%), Postives = 116/139 (83.45%), Query Frame = 3
Query: 78 DIGELKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
++ ELKYDPAD RYP G++GK LL GAS+AGPLRHGLE GRTRKQTREM G E PGPGETP+ EALLAT+L+TGG IV+ YIC LVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQL
Sbjct: 79 NLEELKYDPADDRYPRGLEGKKLLLGASNAGPLRHGLESGRTRKQTREMQGAGEMPGPGETPN--EALLATILQTGGTGIVEYYICKPLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQL 215
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5JI90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI90_9PHAE) HSP 1 Score: 200 bits (508), Expect = 9.940e-58 Identity = 102/135 (75.56%), Postives = 116/135 (85.93%), Query Frame = 3
Query: 90 LKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
LKYDPAD YP G++GK LLWGAS+AGPLRHGLE GRTRK+ REM G E P PGETPDPEEALLAT+L+TGG IV++YIC+SLVKE+W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQL
Sbjct: 306 LKYDPADDSYPRGLEGKKLLWGASNAGPLRHGLESGRTRKKAREMQGAGEMPVPGETPDPEEALLATILKTGGTGIVEDYICSSLVKEQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQL 440
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5JCR5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR5_9PHAE) HSP 1 Score: 203 bits (516), Expect = 3.810e-57 Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 3
Query: 99 DPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQLR 497
DPA+ RYP G++GK LL GAS+AGPLRHGLE GRTRKQTREM G E PGPGETPDPEE LLAT+LETGGM IV++YICNSLVKE+W+EEQTRRMEEM+RRE+Q+VLG E+QAF AEV SGSSQP PDPQLR
Sbjct: 467 DPANDRYPRGLEGKKLLLGASNAGPLRHGLESGRTRKQTREMQGAWEMPGPGETPDPEEVLLATILETGGMGIVEDYICNSLVKEQWDEEQTRRMEEMNRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQLR 599
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Match: A0A6H5JRY6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY6_9PHAE) HSP 1 Score: 199 bits (507), Expect = 4.460e-57 Identity = 104/135 (77.04%), Postives = 115/135 (85.19%), Query Frame = 3
Query: 90 LKYDPADARYPSGVQGKNLLWGASSAGPLRHGLEPGRTRKQTREMHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQTRRMEEMSRRELQKVLGEEEQAFEAEVGGSGSSQPQPDPQL 494
LKYDPAD RYP G++GK LLWGAS+AGPLRHGLE GRTRKQTREM PGPGETPDPEEALLAT+LETGG IV++Y CNSLVK +W+EEQTRRMEEM RRE+Q+VLG E+QAF AEV SGSSQP PDPQL
Sbjct: 131 LKYDPADERYPRGLEGKKLLWGASNAGPLRHGLESGRTRKQTREM------PGPGETPDPEEALLATILETGGTGIVEDYTCNSLVKGQWDEEQTRRMEEMYRREMQEVLGPEQQAFGAEVDASGSSQPLPDPQL 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1296.1 >prot_P-fluviatile_contig11.1296.1 ID=prot_P-fluviatile_contig11.1296.1|Name=mRNA_P-fluviatile_contig11.1296.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=97bp MHGTEEAPGPGETPDPEEALLATVLETGGMEIVQEYICNSLVKERWEEEQback to top mRNA from alignment at P-fluviatile_contig11:3450508..3451964+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1296.1 ID=mRNA_P-fluviatile_contig11.1296.1|Name=mRNA_P-fluviatile_contig11.1296.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1457bp|location=Sequence derived from alignment at P-fluviatile_contig11:3450508..3451964+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3450508..3451964+ >mRNA_P-fluviatile_contig11.1296.1 ID=mRNA_P-fluviatile_contig11.1296.1|Name=mRNA_P-fluviatile_contig11.1296.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=582bp|location=Sequence derived from alignment at P-fluviatile_contig11:3450508..3451964+ (Porterinema fluviatile SAG_2381)back to top |