mRNA_P-fluviatile_contig11.1283.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: D8LU39_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU39_ECTSI) HSP 1 Score: 503 bits (1294), Expect = 1.450e-154 Identity = 248/307 (80.78%), Postives = 263/307 (85.67%), Query Frame = 1
Query: 397 GTALTAPFLTWLLWLEHCRRASELEAKARSAARAFVMRVGSLAPVLEACFQVLRATQ--GGRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXDLARLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQTWA 1311
G +LT PFLTWLLWLEHCRRASELEAK+RSAAR FV R G+L+PV+EACF+VLRA+Q GGR DLARLALAVYFRTVHVFPALSRSWW+DDCARGLRVWVADFT+RHVSPALIQIEAQII ATDKG+WD GGEMS+RASANSRQ VVASYLKEECTLEAVIQLPP+YPLRNVEVTCSKRMGV+ESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPK+MDLPQ TCKTC NRFHS CLY+WFHTSHKNKCPICQQTWA
Sbjct: 1880 GPSLTGPFLTWLLWLEHCRRASELEAKSRSAARVFVARAGALSPVMEACFRVLRASQDDGGRSNSGSIGGASRLGPAQAVRVSRLDPRKPHDLARLALAVYFRTVHVFPALSRSWWSDDCARGLRVWVADFTKRHVSPALIQIEAQIITRATDKGVWDDGGEMSVRASANSRQ--VVASYLKEECTLEAVIQLPPDYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKSMDLPQMTCKTCNNRFHSSCLYKWFHTSHKNKCPICQQTWA 2184
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A7S4DAB1_HETAK (E3 ubiquitin-protein ligase listerin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAB1_HETAK) HSP 1 Score: 273 bits (697), Expect = 5.700e-82 Identity = 122/213 (57.28%), Postives = 158/213 (74.18%), Query Frame = 1
Query: 664 DLARLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
D+ + V+++TV FPAL R WW+ DC RGL V+ FT+ HV P ++Q E I +A G W EM++R S SR+ V A+Y+K+EC+LE VI++P YPL NVEV C++R+GV E RWR+WVLQIVTLL QDGSVLDAV++WK+NVD+EFEGV+PC IC+S+L+PK LP CKTC+N+FHS CLY+WFHTS KNKCP+CQQ
Sbjct: 153 DMMPFCMKVFYQTVEAFPALVRHWWSHDCRRGLNGRVSRFTEEHVGPMIMQREIDKIREAEANGKWGDTSEMTVRGSKVSRE--VTATYMKDECSLEVVIKVPASYPLANVEVNCTRRLGVAEGRWRRWVLQIVTLLGTQDGSVLDAVLLWKQNVDREFEGVDPCPICFSILYPKDHALPTLPCKTCQNKFHSACLYKWFHTSRKNKCPLCQQ 363
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A1V9ZGZ7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGZ7_9STRA) HSP 1 Score: 268 bits (686), Expect = 2.570e-73 Identity = 122/212 (57.55%), Postives = 163/212 (76.89%), Query Frame = 1
Query: 667 LARLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
LA LA A+++RTV P + R WW D+C+R R WVA F + +VSP L+Q E I A +K LWD EM++R S SR+ VV SY+K+EC+LE V+++P YPLR+VEV C+KR+G++E RWR+WVLQI+ + S QDGS+LDAV++WK NVD+EF+GV+PC ICYS+L+PKTM LP +CKTCKN++H+ CLY+WF+ S KNKCPICQQ
Sbjct: 1459 LAPLAGALFYRTVVKLPTMVRLWWNDECSRSARSWVAKFCEENVSPLLLQEEIAAIHAAAEKDLWDPE-EMNVRGSKVSRE--VVTSYIKDECSLEMVVRVPASYPLRSVEVECTKRIGISEERWRRWVLQIIKVTSSQDGSLLDAVLLWKSNVDREFDGVDPCPICYSILNPKTMGLPNLSCKTCKNKYHNSCLYKWFNQSSKNKCPICQQ 1667
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A2P4YRS2_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRS2_9STRA) HSP 1 Score: 252 bits (644), Expect = 4.340e-72 Identity = 113/215 (52.56%), Postives = 156/215 (72.56%), Query Frame = 1
Query: 673 RLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGL-----WDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
+L V+FRTV PA+ RSWW DDC+R R W A + + H++P+++ E +I A + L WD EM+++ S SR+ + +Y+K+EC LE V+++P YPLR VEV C+KR+G++E RWR+WVLQI+ + S +DGS+LDAV++WK+NVDKEFEGVEPC ICYS+L+PK M LP CKTC N++H+ CLY+WF+ S KNKCPICQQ
Sbjct: 329 QLGTCVFFRTVVRLPAMVRSWWNDDCSRAARSWAAKYFEDHITPSVLAAELDLIQKAGENTLTGGESWDDE-EMTVKGSRVSRE--ITTTYMKDECALEMVVRVPSSYPLRCVEVECTKRIGISEDRWRRWVLQIIRVTSSRDGSLLDAVLLWKRNVDKEFEGVEPCPICYSILNPKNMGLPSLPCKTCNNKYHNSCLYKWFNQSGKNKCPICQQ 540
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A485KRY7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRY7_9STRA) HSP 1 Score: 264 bits (675), Expect = 6.980e-72 Identity = 139/302 (46.03%), Postives = 182/302 (60.26%), Query Frame = 1
Query: 400 TALTAPFLTWLLWLEHCRRASELEAKARSAARAFVMRVGSLAPVLEACFQVLRA-TQGGRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXDLARLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
T AP L W L+L S SA AFV + L P L C L+A T+ +A LA AV++RTV P + R WW DDC R R WVA F + +VSP L+ E + I + LWD EM++R S SR+ + +YLK+ECTLE VI++PP YPLR+VEV C+KR+G++E RWR+WVLQI+ + + QDGS+LDAV++WK NVDKEF+GVEPC IC+S+L+PKTM LP C+TC N++H+ CLY+WF+ S KNKCPICQQ
Sbjct: 1342 TTTLAPLLVWDLFLRMFP--STTSPLVTSALGAFVTQHHLLGPFLTLCGHHLQAATKATASSSTTLPTAAAVDAAFPTLSTLAALDVASAVAPLAAAVFYRTVVKLPTMVRLWWNDDCTRSTRSWVAKFCEENVSPLLLVEEIRAIQVGGETALWDAD-EMTVRGSKVSRE--ITTTYLKDECTLEMVIRVPPSYPLRSVEVECTKRIGISEERWRRWVLQILKVTASQDGSLLDAVLLWKSNVDKEFDGVEPCPICFSILNPKTMGLPNLQCRTCSNKYHNSCLYKWFNQSSKNKCPICQQ 1638
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A067CAS8_SAPPC (E3 ubiquitin-protein ligase listerin n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAS8_SAPPC) HSP 1 Score: 264 bits (674), Expect = 9.520e-72 Identity = 117/212 (55.19%), Postives = 162/212 (76.42%), Query Frame = 1
Query: 667 LARLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
L+ LA A+++RTV P + R WW D+C+R R WVA F + ++SP L+Q E I +++K LWD EM++R S SR+ ++ SY+K+EC+LE VI++P YPLR+VEV C+KR+G++E RWR+WVLQI+ + S QDGS+LDAV++WK NVD+EF+GV+PC ICYS+L+PKTM LP CKTC N++H+ CLY+WF+ S KNKCPICQQ
Sbjct: 1455 LSPLAAALFYRTVLKLPTMVRLWWNDECSRSARSWVAKFCEENISPLLLQEEIAAIHASSEKDLWDPE-EMTVRGSKVSRE--IITSYIKDECSLEMVIRVPASYPLRSVEVECTKRIGISEERWRRWVLQIIKVTSSQDGSLLDAVLLWKTNVDREFDGVDPCPICYSILNPKTMGLPNLPCKTCNNKYHNSCLYKWFNQSSKNKCPICQQ 1663
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A835ZJN0_9STRA (E3 ubiquitin-protein ligase listerin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJN0_9STRA) HSP 1 Score: 234 bits (598), Expect = 4.040e-70 Identity = 106/174 (60.92%), Postives = 136/174 (78.16%), Query Frame = 1
Query: 790 RHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQTWA 1311
RHV+PA+I E ++ A G WD G +++RAS VVA+Y+K+E L I+LPP YPLR VEV+C++++G+ E+RWR+WVLQIVTLLS++DGSVLDAV++WK+NVDKEFEG+EPCVICYS LHP+ M LP C+TC NRFH CLY+WF TSHK+KCP+CQQTWA
Sbjct: 1 RHVTPAIIAREIAHLSSARAGGRWDSEG-LAVRAS--EAVGEVVATYVKDESELSMTIRLPPSYPLRAVEVSCARQLGIGEARWRRWVLQIVTLLSVRDGSVLDAVLLWKRNVDKEFEGMEPCVICYSTLHPRDMALPTLACRTCSNRFHPSCLYKWFQTSHKSKCPLCQQTWA 171
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A6G0WLG8_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLG8_9STRA) HSP 1 Score: 259 bits (661), Expect = 4.700e-70 Identity = 135/303 (44.55%), Postives = 189/303 (62.38%), Query Frame = 1
Query: 409 TAPFLTWLLWLEHCRRASELEAK-ARSAARAFVMRVGSLAPVLEACFQVLRATQGGRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXDLARLALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQII-ADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQTWA 1311
+AP L+W + R E SA AFV R L P+L C VL++++ G +A LA AV++RTV P + R WW D+C+R R WV+ F + VSP ++ E Q I A + ++ LWD EM++R S SR+ + +YLK+EC+LE VI++PP YPLR VEV C+KR+G++E RWR+W+LQI+ + + QDGS+LDAV++WK NVDKEF+GVEPC IC+S+L+PKTM LP C+TC N++H+ CLY+WF+ S KNKCPICQQ ++
Sbjct: 1345 SAPLKLLLVWDLYLRMFPETSNPLVTSALGAFVGRQKLLTPLLTLCGHVLQSSKVQLGSNEAVEGAFPALDGLDREIA---------VAPLAAAVFYRTVVKLPTMVRLWWNDECSRSARSWVSKFCEELVSPLMLNEEIQSIQAASAEQSLWDPD-EMTVRGSKVSRE--ITTTYLKDECSLEMVIRVPPSYPLRTVEVECTKRIGISEERWRRWILQILKVTTSQDGSLLDAVLLWKSNVDKEFDGVEPCPICFSILNPKTMGLPNLPCRTCNNKYHNSCLYKWFNQSSKNKCPICQQPFS 1635
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: A0A8K1C458_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C458_PYTOL) HSP 1 Score: 258 bits (660), Expect = 6.690e-70 Identity = 113/209 (54.07%), Postives = 157/209 (75.12%), Query Frame = 1
Query: 676 LALAVYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
+A +FRTV PA+ R+WW D+C RGLR W + + + H++P ++ E II A+ WD EM+++ S SR+ + +Y+K+EC LE VI++P YPLR+VEV C++R+G++E RWR+WVLQI+ + S QDGS+LDAV++WK+NVDKEFEGVEPC ICYS+L+PKTM LP +CKTC N++H+ CLY+WF+ S KNKCPICQQ
Sbjct: 1592 IAARSFFRTVIRLPAMVRAWWNDECGRGLRSWASKYFEEHITPYVLASELAIIQKASSLNSWDVD-EMTVKGSKVSRE--ITTTYMKDECALEMVIRVPSSYPLRSVEVECTRRIGISEDRWRRWVLQIIKVTSAQDGSLLDAVLLWKQNVDKEFEGVEPCPICYSILNPKTMGLPNLSCKTCSNKYHNSCLYKWFNQSGKNKCPICQQ 1797
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Match: K3WIF3_GLOUD (E3 ubiquitin-protein ligase listerin n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIF3_GLOUD) HSP 1 Score: 258 bits (659), Expect = 9.250e-70 Identity = 114/205 (55.61%), Postives = 153/205 (74.63%), Query Frame = 1
Query: 688 VYFRTVHVFPALSRSWWADDCARGLRVWVADFTQRHVSPALIQIEAQIIADATDKGLWDGGGEMSIRASANSRQASVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVTESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQTTCKTCKNRFHSRCLYRWFHTSHKNKCPICQQ 1302
V+FRTV PA+ R+WW D+C R LR W A + + H++P ++ E II A+ WD EMS++ S SR+ + +Y+K+EC LE VI++P YPLR+VEV C+KR+G+ E RWR+WVLQI+ + + QDGS+LDAV++WK+NVDKEFEGVEPC ICYS+L+PKTM LP CKTC N++H+ CLY+WF+ S KNKCPICQQ
Sbjct: 1691 VFFRTVTRLPAMVRTWWNDECTRSLRSWAAKYFEDHITPFILSSELDIIQSASQTHSWDVD-EMSVKGSRVSRE--ITTTYVKDECALEMVIRVPASYPLRSVEVECTKRIGIAEDRWRRWVLQIIKVTASQDGSLLDAVLLWKQNVDKEFEGVEPCPICYSILNPKTMGLPNLPCKTCSNKYHNSCLYKWFNQSGKNKCPICQQ 1892 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1283.1 >prot_P-fluviatile_contig11.1283.1 ID=prot_P-fluviatile_contig11.1283.1|Name=mRNA_P-fluviatile_contig11.1283.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=270bp MRVGSLAPVLEACFQVLRATQGGRGVRGTGAASARLGSVQAIRVSRLDPRback to top mRNA from alignment at P-fluviatile_contig11:3296634..3303473- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1283.1 ID=mRNA_P-fluviatile_contig11.1283.1|Name=mRNA_P-fluviatile_contig11.1283.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6840bp|location=Sequence derived from alignment at P-fluviatile_contig11:3296634..3303473- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3296634..3303473- >mRNA_P-fluviatile_contig11.1283.1 ID=mRNA_P-fluviatile_contig11.1283.1|Name=mRNA_P-fluviatile_contig11.1283.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1620bp|location=Sequence derived from alignment at P-fluviatile_contig11:3296634..3303473- (Porterinema fluviatile SAG_2381)back to top |