mRNA_P-fluviatile_contig11.1240.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1240.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI) HSP 1 Score: 523 bits (1348), Expect = 9.720e-176 Identity = 340/671 (50.67%), Postives = 393/671 (58.57%), Query Frame = 1
Query: 16 ISGTLFPSPEPEPAPIDRWARGWVISRNATANDWIQRVHGGSSDSWSEDGRSLRPGKSMGTGLNNAHRH------HARQRPQGSNSRQDGAEAPFPIAPEAREDQSLPPWIPVKGVNTQKGKNGST----GKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVDAEAGNDMSNINSRVKELGGREWTIDGSGEILIVERVKGDDMRKTVVSALYNFRDVGEKAEDNDRAAMEGTRDGGGG-------------RLETGKGRGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVRASGRRHGAGLFFELEPTLQPNLTNSVDRPGAGVSVSDGSSFKEGPNWPQDPNHMSRSEYRQRQWQQNFSDGRTLDGAEDASTLGFSIGSVQSAPALRGLGLGHFDNENDPGWRGGNHAASSCNGENGG--GGHRGTSITSFDNVNPFAGGIRMAGSTPTRLDGKPTATGPGIDGVGQSPLPASVGNQEGGMHFARAGPESPSAGEETDDPHLALTKDPDWGRNVRGSPREAGFLPKVKHVSRERPLTHERSQTRNPRDPRNVPAGKVTHISPKSKAVTSTAEGNGRHERGGGKHEARSKADGTGSVKSLASSSFTSLPMSLSGWGRSGNGGEGWGPDSALAGTT-RGKKDRGMITMARPQTIIVEGLLR 1950
++GTLFPSPEPE PIDRWARGWV SR T DW + G SSD SE GRSLR +S TG+ +AHRH HAR RP S+ ++D + PFP+APE REDQSLPP IP V + K G + G+ G D + +++SR+K+LGGREWTIDG+GE+LIV+RV+GD M KTVVSALYNFRDV +K + G +GGGG R G G G+ XXX RR G+G FFELEPTLQPNL NS+DRPG GVSVSDG S KEGP+WPQDP HMSRSEYR+RQ +Q+ + LDG EDAS+LGFS+GSVQSAPALRGLGLG N G R G G RGTSIT+F++VNPFAGGIR+ S P DG+ A G G SPL ASVG Q G F AGPES S GE +DDPHLAL KDPDWGRNVRGSP+EAG+LPKVK VSRERPLTHER TRNPRDPRNVPA H+SPK N R G + + D GS KS SF SLPMSL+GWG G GG G + G RGKK RGMITM +P+ IIV+GLLR
Sbjct: 1 MAGTLFPSPEPETPPIDRWARGWVASRRTTVRDWDRFPRGSSSDDGSEGGRSLRSVRSTATGMTSAHRHGXXXXXHARHRPHSSSCKEDSSGVPFPLAPEVREDQSLPPTIPGHSVRMSR-KGGDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGESESGCLWDGGTDG-SDRQEDDLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVRDK--------LAGGENGGGGVXXXXXXXLDGGKRHRDGSGVGK-TRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLTGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLNGNAAAGGGRDGGXXXXXXXXXXXXXXGVGRGTSITAFEDVNPFAGGIRVDTSPPAGGDGRGAAGASGTRGD-LSPLTASVGGQSGSF-FPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPK----------NSTSSRVGCNADPQYTGDDGGSTKS----SFPSLPMSLTGWGEGGGGGS-LGKGGGVPGRPMRGKKGRGMITMTKPKEIIVQGLLR 643 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1240.1 >prot_P-fluviatile_contig11.1240.1 ID=prot_P-fluviatile_contig11.1240.1|Name=mRNA_P-fluviatile_contig11.1240.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=651bp MQQQSISGTLFPSPEPEPAPIDRWARGWVISRNATANDWIQRVHGGSSDSback to top mRNA from alignment at P-fluviatile_contig11:2854720..2859304+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1240.1 ID=mRNA_P-fluviatile_contig11.1240.1|Name=mRNA_P-fluviatile_contig11.1240.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4585bp|location=Sequence derived from alignment at P-fluviatile_contig11:2854720..2859304+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2854720..2859304+ >mRNA_P-fluviatile_contig11.1240.1 ID=mRNA_P-fluviatile_contig11.1240.1|Name=mRNA_P-fluviatile_contig11.1240.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3906bp|location=Sequence derived from alignment at P-fluviatile_contig11:2854720..2859304+ (Porterinema fluviatile SAG_2381)back to top |