mRNA_P-fluviatile_contig11.1233.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1233.1
Unique NamemRNA_P-fluviatile_contig11.1233.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: D8LK97_ECTSI (Divergent RAB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK97_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 7.790e-142
Identity = 290/556 (52.16%), Postives = 332/556 (59.71%), Query Frame = 1 
Query:    1 MPRPCCARVVDALCPCFRRRSLSSASG--GVLGNPYLSVNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAEN--PSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLARERLKGSTSRSGNKSVNTTMQSVPGLKRALRARASVMDVFKGMAGRREHLRHEHGSESLKPEEANENGVHERRGHP--------------QPPRWSPEETGGAGWGQSGERTTGAASTRRGIRP--RKFSSRADYLSPHRAVTAA--------------NSPVAQSGSADGPTASLSKRPTTQ----KRCAKGHGTEEYTSPPSAPXXXXXXXXXXXILLKGRLRRA-SPERTAGSVSQATMV-----------------EDSAATKLRETSSFWLRKWGIKAAKTDATRGRHSV-IRGSHP 1497
            M R CC RV+DALCPCFR+  L S+    G  G   +S+N +LHGEC VGKTSLRNRWVDGIFTGDVAPT GVDFNIKTLDLVQE  ++      E   A A    PS    KGG   K+ AP  DLQVKINVYDTSGKPGYR+VNSTYLLAFDAVLFVYDISS+++LNELRRYFSDPEHRDKLA KK++GMAMLLVGNKCD+PLSQRQVGSQTGQ+TAAEFGMPFVEVSAKTG +VREAFMF TTRAV E LAR RLK S  R    +V  TMQ VPGL+RALR RASV+DVFKG+ GRR + +       L                               +P +  P      G G  G+ TT  A   R   P  R+  SRA   SP    TA+               SPVA SG+ D  T+SL +RP       +R ++G    +  +  S             +L  GR     SPERT  +                        E+SA  +LRE SSFWL KWGIKAAKTDATR RHS   RGS+P
Sbjct:    1 MGRSCCRRVLDALCPCFRQNRLGSSPSVSGASGEHDMSLNFILHGECGVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEGEDGGDQTREEEPAVAGKTLPSGGRGKGGSTTKQ-APCADLQVKINVYDTSGKPGYREVNSTYLLAFDAVLFVYDISSVSTLNELRRYFSDPEHRDKLAAKKKAGMAMLLVGNKCDMPLSQRQVGSQTGQDTAAEFGMPFVEVSAKTGTNVREAFMFATTRAVGEHLARTRLKQSAGRGRGATVKKTMQKVPGLQRALRTRASVLDVFKGLTGRRRYPQKAQPVIVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXAAERPLQRLPSSARRGGRGGLGQGTTARAWALRAAAPPHRRHLSRAKSPSPRGLATASAAAAASQGLQQRRPESPVALSGTGDAATSSLLERPELSPVEVERRSEGAAFRKIGA--STLATTTAAEDKESVLACGRRSSGTSPERTVSTXXXXXXXXXXXXXXXXXXXXXXXXEESATKQLREASSFWLDKWGIKAAKTDATRERHSKEFRGSYP 553
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A6H5KHP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP3_9PHAE)

HSP 1 Score: 397 bits (1019), Expect = 9.470e-129
Identity = 277/531 (52.17%), Postives = 316/531 (59.51%), Query Frame = 1 
Query:    1 MPRPCCARVVDALCPCFRRRSLSSASG--GVLGNPYLSVNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEV-EDEXXXX-EGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLARERLKGSTSRSGNKSVNTTMQSVPGLKRALRARASVMDVFKGMAGRREHLRHEH--GSESLKPEEANENGVHERRGHP---------------QPPRWSPEETGGAGWGQSGERTTGAASTRRGIRP--RKFSSRADYLSPHRAVTAA------------NSPVAQSGSADGPTASLSKRPTTQ----KRCAKGHGTEEYTSPPSAPXXXXXXXXXXXILLKGRLRRA-SPERTA-------GSVSQATM----------VEDSAATKLRETSSFWL 1422
            M R CC R +DALCPCFRR  L S++   G  G   +S+N +LHGEC VGKTSLRNRWVDGIFTGDVAPT GVDFNIKTLDLVQE  EDE     E E + A    PS    KGG   K+ AP  DL+VKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISS+++LNELR+YF++PEHR+KLA KK++GMAMLLVGNKCD+PLSQRQVGSQTGQ+TAAEFGMPFVEVSAKTG +VREAFMF TTRAV E LAR RLK S  R    +V  TMQ VPGL+RALR RASV+DVF G+ GRR + +     G     P  A                           Q P  S    G  G GQ    TT  A   R   P  R   SRA   SP    TAA             SPVA+SG+ D  T+SL +RP       +R ++G    +  +  S             +L  GR     SPERT        G VSQ              E+SA  +LRE SSFWL
Sbjct:    1 MGRSCCRRALDALCPCFRRHRLGSSTSVSGASGEHDMSLNFILHGECGVGKTSLRNRWVDGIFTGDVAPTFGVDFNIKTLDLVQEEGEDEGDQAREEETAVAGKTLPSGGRGKGGSTAKQ-APHADLKVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSVSTLNELRQYFNNPEHREKLAAKKKAGMAMLLVGNKCDMPLSQRQVGSQTGQDTAAEFGMPFVEVSAKTGTNVREAFMFATTRAVGEHLARTRLKQSAGRGRGATVKKTMQKVPGLQRALRTRASVLDVFTGLTGRRRYPQKAQPVGILPAAPPTAGNAXXXXXXXXXXXXXXXXXXXXERPLQRPSSSARRGGRGGLGQG---TTAQAWALRAAAPPHRCHLSRAKSSSPRGLTTAAAAAFQGLQQRRPESPVARSGTGDAATSSLLERPELSPVDVERGSEGAAFRKGGA--STLATTTAAEDKESVLACGRRSSGTSPERTVSTSGGSHGDVSQGAXXXXXXXXXXXAEESATKQLREASSFWL 525
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A7S2D815_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D815_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.920e-20
Identity = 73/237 (30.80%), Postives = 113/237 (47.68%), Query Frame = 1 
Query:   70 SASGGVL-------GNPYLSVNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPE-HRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLARE 756
            +ASGG         G  YL V L+L G+  VGK+SL  R+ D  F+     TIG+DF IK++++                                        + L+VK+ ++DT+G+  ++ + + Y      +L VYD+SS A+ + ++ +    E H ++   K       +LVGNK DVP   RQV  + G+  AAE+ +PF E SAK    V EAF  +T + V +RL +E
Sbjct:   39 AASGGTCMAAQSQRGYNYL-VKLLLIGDSAVGKSSLLLRFSDASFSSSFITTIGIDFQIKSIEI----------------------------------------DGLKVKLQIWDTAGQERFKTITTAYYRGAMGILLVYDVSSRATFDHVKDWIRQIEQHAEENVNK-------ILVGNKSDVPAEMRQVTYEEGKALAAEYNLPFYETSAKADLEVTEAFEGIT-KDVVDRLGKE 226
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A6S8IR56_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IR56_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.690e-19
Identity = 67/232 (28.88%), Postives = 109/232 (46.98%), Query Frame = 1 
Query:   97 PY-LSVNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSD-PEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLARERLKGSTSRSG 786
            PY + + L++ G+  VGKT L  R+ +  F+     TIG+DF IK +D+                                        +  ++K+ ++DT+G+  +R + ++Y      +L VYD++   S   +R + S   +H D    K       +LVGNKCD+ + ++ V +  GQ+ AAEFG+PF EVSAK    V E+F  +   AV +RL  +   G   +SG
Sbjct:    7 PYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDI----------------------------------------QGTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNK-------ILVGNKCDM-MDEKVVSTAEGQKLAAEFGIPFAEVSAKNDIKVDESFQSLAA-AVKDRLVADGAGGPAKQSG 189
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: M5X0Z8_PRUPE (Uncharacterized protein n=6 Tax=Prunus TaxID=3754 RepID=M5X0Z8_PRUPE)

HSP 1 Score: 97.4 bits (241), Expect = 1.950e-19
Identity = 64/221 (28.96%), Postives = 105/221 (47.51%), Query Frame = 1 
Query:  109 VNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLARERLKGS 771
            + L+L G+  VGK+ L  R+ DG FT     TIG+DF I+T++L                                        +  ++K+ ++DT+G+  +R + + Y      +L VYD++  +S N +R +  + E    ++  K      +LVGNK D+  S+R V +  GQ  A E+G+ F+E SAKT  +V E F F   R + +RLA    +G+
Sbjct:   16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEL----------------------------------------DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASVSVNK------ILVGNKADMDESKRAVPASKGQALADEYGIKFLETSAKTNMNVEEVF-FSIGRDIKQRLAESDARGT 189
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A7S3ACI0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ACI0_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 5.030e-19
Identity = 58/216 (26.85%), Postives = 104/216 (48.15%), Query Frame = 1 
Query:  103 LSVNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLA 750
            L + L++ G+  VGKT+L  R+ D  F   + PTIG+DF IKT++L                                        +  ++++ ++DT+G+  +R++   Y      +L +YD++++ S + +R +  + +        K      +L+GNKCD+   QRQV +  G++ A E+GM F+E SA+   +V +AF+ + T  V   LA
Sbjct:   12 LQIKLMMIGDQAVGKTALLVRYADKEFHEQLLPTIGIDFKIKTIEL----------------------------------------QGKKIRLQIWDTAGQERFRNITQAYYRGAMGILLIYDVTNLKSWSNVRNWVRNIDGNTPQTVNK------ILIGNKCDIT-GQRQVTTAQGEQLAREYGMKFLETSARANTNVTDAFLTIATDVVERLLA 180
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A6T7YLR6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7YLR6_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 1.270e-18
Identity = 58/216 (26.85%), Postives = 104/216 (48.15%), Query Frame = 1 
Query:  103 LSVNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLA 750
            L + L++ G+  VGKT+L  R+ D  F   + PTIG+DF IKT++L                                        +  ++++ ++DT+G+  +R++   Y      +L +YD+S++ S + +R +  +          K      +L+GNKCD   ++RQV +  G++ A E+GM F+E SA++  +V +AF+ + T  V   LA
Sbjct:   34 LQIKLMMIGDQAVGKTALLVRYADSEFHEQLLPTIGIDFKIKTIEL----------------------------------------QGKKIRLQIWDTAGQERFRNITQAYYRGAMGILLIYDVSNLKSWSNVRNWVRNIHENTPQTVNK------ILIGNKCD-KTTERQVTTAQGEQLAREYGMKFLETSARSNVNVTDAFLTIATDVVERLLA 202
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: UPI000D62EF03 (ras-related protein RABE1a-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62EF03)

HSP 1 Score: 94.0 bits (232), Expect = 3.120e-18
Identity = 63/214 (29.44%), Postives = 99/214 (46.26%), Query Frame = 1 
Query:  109 VNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLA 750
            + L+L G+  VGK+ L  R+ DG FT     TIG+DF I+T+++                                        +  ++K+ ++DT+G+  +R + + Y      +L VYD++  AS N +R +  + E        K      +LV NK D+  SQR V +  GQ  A E+GM F+E SAKT  +V E F F   R + +RL+
Sbjct:   16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVEI----------------------------------------DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNK------ILVANKADMDESQRAVPTSKGQALADEYGMKFLETSAKTNMNVEEVF-FTIARDIKQRLS 182
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A1D1ZIW7_9ARAE (Ras-related protein Rab-8A n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZIW7_9ARAE)

HSP 1 Score: 93.6 bits (231), Expect = 3.620e-18
Identity = 62/213 (29.11%), Postives = 100/213 (46.95%), Query Frame = 1 
Query:  109 VNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERL 747
            + L+L G+  VGK+ L  R+ D  FT     TIG+DF I+T++L                                        +  ++K+ ++DT+G+  +R + + Y      +L VYD++   S N +R +FS+ E           G+  +L+GNKCD  L ++ +  + GQ  A EFG+ F+E SAK   +V EAF F   R + +RL
Sbjct:   13 IKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIEL----------------------------------------DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRNWFSNIEQHAS------EGVNKILIGNKCDW-LEKKVIAKEQGQLLADEFGIKFLETSAKANTNVEEAF-FTLARDIKKRL 177
[Close]
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Match: A0A1Y2HP65_9FUNG (Ras family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HP65_9FUNG)

HSP 1 Score: 93.6 bits (231), Expect = 3.790e-18
Identity = 57/201 (28.36%), Postives = 94/201 (46.77%), Query Frame = 1 
Query:  109 VNLVLHGECEVGKTSLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEXXXXEGELSEAPAENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFDAVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVPLSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAF 711
            + L+L G+  VGK+ L  R+ D  FT     TIG+DF I+T++L                                        +  ++K+ ++DT+G+  +R + + Y      +L +YD++   S N +R +  + E          +G+  +LVGNKCDV   ++ +  + GQE A EFG+ F+E SAK+   V EAF
Sbjct:   12 IKLLLIGDSGVGKSCLLLRFTDDSFTPSFITTIGIDFKIRTIEL----------------------------------------DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLIYDVTDERSFNNIRNWIRNIEQHAS------AGVNKILVGNKCDVA-DKKVISKEQGQELADEFGIKFIETSAKSNIGVEEAF 165
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK97_ECTSI7.790e-14252.16Divergent RAB-like GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KHP3_9PHAE9.470e-12952.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2D815_9STRA6.920e-2030.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6S8IR56_9STRA1.690e-1928.88Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
M5X0Z8_PRUPE1.950e-1928.96Uncharacterized protein n=6 Tax=Prunus TaxID=3754 ... [more]
A0A7S3ACI0_9EUKA5.030e-1926.85Hypothetical protein (Fragment) n=2 Tax=Haptolina ... [more]
A0A6T7YLR6_9EUKA1.270e-1826.85Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
UPI000D62EF033.120e-1829.44ras-related protein RABE1a-like n=1 Tax=Cynara car... [more]
A0A1D1ZIW7_9ARAE3.620e-1829.11Ras-related protein Rab-8A n=1 Tax=Anthurium amnic... [more]
A0A1Y2HP65_9FUNG3.790e-1828.36Ras family-domain-containing protein n=1 Tax=Caten... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2773645..2782043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score443.0
Seed ortholog evalue1.9e-121
Seed eggNOG ortholog2880.D8LK97
KEGG koko:K07874
KEGG Pathwayko05134,map05134
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0084@1,KOG0084@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiondivergent RAB-like GTPase
Ec32 orthologEc-16_002590.1
Exons6
Model size1724
Cds size1536
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815471.6084168-UTR-P-fluviatile_contig11:2773644..27738321622815471.6084168-UTR-P-fluviatile_contig11:2773644..2773832Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2773645..2773832 -
1693561948.7829773-UTR-P-fluviatile_contig11:2773644..27738321693561948.7829773-UTR-P-fluviatile_contig11:2773644..2773832Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2773645..2773832 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815471.6209428-CDS-P-fluviatile_contig11:2773832..27739461622815471.6209428-CDS-P-fluviatile_contig11:2773832..2773946Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2773833..2773946 -
1693561951.3089905-CDS-P-fluviatile_contig11:2773832..27739461693561951.3089905-CDS-P-fluviatile_contig11:2773832..2773946Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2773833..2773946 -
1622815471.6317875-CDS-P-fluviatile_contig11:2774600..27747891622815471.6317875-CDS-P-fluviatile_contig11:2774600..2774789Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2774601..2774789 -
1693561951.3239224-CDS-P-fluviatile_contig11:2774600..27747891693561951.3239224-CDS-P-fluviatile_contig11:2774600..2774789Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2774601..2774789 -
1622815471.641804-CDS-P-fluviatile_contig11:2775777..27761791622815471.641804-CDS-P-fluviatile_contig11:2775777..2776179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2775778..2776179 -
1693561951.3354087-CDS-P-fluviatile_contig11:2775777..27761791693561951.3354087-CDS-P-fluviatile_contig11:2775777..2776179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2775778..2776179 -
1622815471.6539373-CDS-P-fluviatile_contig11:2776844..27770601622815471.6539373-CDS-P-fluviatile_contig11:2776844..2777060Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2776845..2777060 -
1693561951.3565288-CDS-P-fluviatile_contig11:2776844..27770601693561951.3565288-CDS-P-fluviatile_contig11:2776844..2777060Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2776845..2777060 -
1622815471.6718085-CDS-P-fluviatile_contig11:2781150..27812701622815471.6718085-CDS-P-fluviatile_contig11:2781150..2781270Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2781151..2781270 -
1693561951.3678868-CDS-P-fluviatile_contig11:2781150..27812701693561951.3678868-CDS-P-fluviatile_contig11:2781150..2781270Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2781151..2781270 -
1622815471.6867645-CDS-P-fluviatile_contig11:2781548..27820431622815471.6867645-CDS-P-fluviatile_contig11:2781548..2782043Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2781549..2782043 -
1693561951.3773017-CDS-P-fluviatile_contig11:2781548..27820431693561951.3773017-CDS-P-fluviatile_contig11:2781548..2782043Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2781549..2782043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1233.1prot_P-fluviatile_contig11.1233.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2773833..2782043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1233.1

>prot_P-fluviatile_contig11.1233.1 ID=prot_P-fluviatile_contig11.1233.1|Name=mRNA_P-fluviatile_contig11.1233.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=512bp
MPRPCCARVVDALCPCFRRRSLSSASGGVLGNPYLSVNLVLHGECEVGKT
SLRNRWVDGIFTGDVAPTIGVDFNIKTLDLVQEVEDEDEDEEGELSEAPA
ENPSRVAAKGGLPKKRRAPFEDLQVKINVYDTSGKPGYRDVNSTYLLAFD
AVLFVYDISSMASLNELRRYFSDPEHRDKLATKKRSGMAMLLVGNKCDVP
LSQRQVGSQTGQETAAEFGMPFVEVSAKTGASVREAFMFVTTRAVTERLA
RERLKGSTSRSGNKSVNTTMQSVPGLKRALRARASVMDVFKGMAGRREHL
RHEHGSESLKPEEANENGVHERRGHPQPPRWSPEETGGAGWGQSGERTTG
AASTRRGIRPRKFSSRADYLSPHRAVTAANSPVAQSGSADGPTASLSKRP
TTQKRCAKGHGTEEYTSPPSAPAAAAVEDEEDDILLKGRLRRASPERTAG
SVSQATMVEDSAATKLRETSSFWLRKWGIKAAKTDATRGRHSVIRGSHPP
SPRYGSGTGSQ*
back to top

mRNA from alignment at P-fluviatile_contig11:2773645..2782043-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1233.1 ID=mRNA_P-fluviatile_contig11.1233.1|Name=mRNA_P-fluviatile_contig11.1233.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8399bp|location=Sequence derived from alignment at P-fluviatile_contig11:2773645..2782043- (Porterinema fluviatile SAG_2381)
ATGCCACGGCCTTGTTGCGCACGGGTAGTAGACGCGCTGTGCCCTTGTTT
CCGTCGTCGCTCGCTGTCCTCTGCATCGGGCGGCGTTCTCGGCAACCCAT
ACTTGAGTGTAAACCTCGTTCTGCACGGAGAATGCGAGGTCGGGAAGACG
AGCCTCAGAAACAGGTGGGTTGACGGCATCTTCACGGGGGACGTTGCCCC
GACAATTGGCGTGGATTTCAACATCAAGACTCTCGATCTAGTGCAAGAGG
TCGAGGACGAGGACGAGGACGAGGAGGGCGAATTGTCCGAAGCCCCAGCC
GAAAATCCGTCGCGGGTAGCAGCAAAGGGGGGCCTTCCGAAGAAGCGCCG
AGCACCTTTTGAAGACCTGCAGGTGAAGATTAATGTGTACGACACCAGCG
GCAAGCCTGGCTATCGAGATGTTAACAGCACGTATCTCCTGGCGTTCGAT
GCGGTCCTCTTCGTCTACGATATCTCCTCGATGGCGTCCCTGAATGTGAG
CTGAACTATACTCCGTATACATGATCGTTGACGAGCAGTCGCGGCAGATC
AAATTCGTGTGTCACATATGCCGCTGTTCGACGCATGCATGTTGATCTTT
CAGCTGCTTACAGCGTTTGTTTACTTCATGTTGCCAGCTAAAACCTGAAA
ATATGCTACCTCAACTGTAATGTACGTTTCTACCGGCGCACGAGAGCCCG
CTTCAACTGTATCGTACGGTAAACGAACAATATATCCCTGAAGGCGAGTT
GCTTCGTCTCCGGTACCCAGCAGGAGCTACGTCGGTATTTCAGCGACCCA
GAACACCGCGACAAACTTGCGACTAAGAAAAGATCAGGCATGGCGATGTT
GCTGGTCGGGAACAAGTGCGACGTTCCACTTTCGCAGCGTCAGGTATGAT
GCGGGAGCAAGGGCGGGGGGGCTTACTCATGTTTTGCATGCCTTAGTTGT
TAGACCATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCGCAGG
ATCGATTACCGATGGCCAATCGTTCCTTCCTACTTTGCCAGAGGTGGCTC
AAAAATGTTTTCCCTAACTGTCTACTTAATACCTGTCCTTCCTGGGCCAC
ATATTACACCCGAGTACCGCAGCCGTCTTCTCCTCTTTGTTCCATGCCTC
GAACTTCTCTCTATACCGACTGTCTACTTTTTCCAGCTCAACCATGTACC
CTTCTCTCTCCTGATCGTTTAACGGGCATTCGGCACATACATGTACCCGG
TCTTCGCATTCGGCGCCGCAGTCACCTTTGAACTTGTCTTCGTCGTCGTC
TACCTTCCTAAACCTCCTTCCACATTCCGGAAGGTCAATGTCGCCCGTTC
CAAATTTGACCTTCATCTTTGTCCCTTCATCCAATGGTCCGTTCAGGTGC
TCCTTGAACCCTATTCCTTCGTTCAGCCTTCCGTACACTTCTAGAACCTC
CTTTTCCTTGGTCGCTTTCCGCAAGCTCTGGTCTTGTCTATTTTCAAAGG
CTTCTGAGATACTCGTCTTGTACCCTTCTAAGCTTTCCGCTCCCGTCGTC
TCCTGTTCGTCAATATCTAACCCACTCCACACTCCCTGTACAACCTTAGC
CCACTCAATGGGTTGTCTACCCTTGGCCTTGTTTACCCATCTCGCCTCCC
GAGCTATTCTCGGTAACTCTCCTTTCCCATGCTTTCCATACGGTATTGCC
ATGTCAACTTCCTCCTGTCTCTTCCCGTTCTTAAGGAGTAGACCCTCAAC
TCTGCTCTTACTGCTGCGTTACTTGTGCGCTGGGAGCATCCTAGAAGGAT
CTTCGCTGCTTTCATCTGCGCTGCCTCCAACTCTGAAGCAGCCGAGAATG
ATCTTCGCTGCTTTCATCTGCGCTGCCTCCAACTCTGCTACTATTTTCTT
GGTCCCTTCCCAAACTTCTCCCGCGTACTCTAGTGGCGGGATGATAACAC
TTTTCAGAATGGTCATTTTGACGCGTGTATCAAGGTGCCGGTCTGCTAGG
ATTGGGTGCAACTTCCCTGCCCTTGCTTTGCCCCTGTCCGCTATTTTGTG
CATGTGTGCATCCCATTTACAGTCTTTTGCTATCTCTACTCCAAGGTGTG
TGTATTTTTCCACTCTTGGCAGCTCCTTGTCCCCCCACGTCCACTTGGTA
CCTACTTCCTCGTCACCAACTTCATTGCATACCATTACGGCACACTTTGG
GACGTTGGCCGAGAATCTCCACTTATCAGCGTAGGTCTTCGCTGCGTTAA
TCTGTAGTTGGAGCCCCTCAGGCGTGTCCGACATCCCAACAAAGTCGTCA
GCAAATAGCAGTCCCGATACCGAGGTTTCCCCTACTTCTACTCCCTTCCC
TACCGCCTCTACCTCTTTCAGTAAGTCGTTGATGAATACCTGGAACAACG
TTGGGGACATTGTGCACCCCTGTGGGACCCCCTGCTCAATGTCGAAGAAC
CTCGAGAGTTCTCCATCTAACATCACGGCGCTTTTCGTGCTCTCTGTCAT
CTTCTTAATCATTCTCCACATCTTCCCGTTTATCCCATACTTCGCCAACT
GTTTCCAGAGCCCATTTCTCCATACTGTATCATACGCTTTCTGAACGTCT
AGGAAAAAACAATATGTCAGCGTTCCCACCCTCTTCCGACCTTGTATGAT
TCTCCCTACCGTGCATAGGTGATCTCCACACCCCCTAGCCTCCCTGAAAC
CTGCTTGACCCTCACTAATTCTCTTTTCCATCTCCAGTACTCGTACTATT
CTGTTGTTGAGGATCTTGAAGAACACTTTCCCTACTGTGCTCAACAGGGT
AATTCCCCTATAGTTTCCTGGGTCAGTCTTATCTCCTTTCTTAAATAGGT
TCACCACCACCCCTTCCCTCCATCTACTCGGTGCGTATTCGTTTTCCCAT
ACCCAGTTGAACAACAGCACCATCATCTGAATCATCCCCTCCCCCCCGAA
CTTCATGATTTCGTTCACTATCCCGACTACCCCTGCGGCCTAGTGACGCT
GCAGTTTTTTCACACAACTCTCAACCTCTTCGTCGGTGAACTTCTTTTGG
AGCTCTGCATGCCCAACTTCATCCATCGAAGCTCTCTCTTCGGGCCCACG
CGTCTACCTCTTCCTTGAATACTTGGTCGAAGTCTGCCTTTTCCGGCGGC
ACCCCGAGTCTCCTATAGTGTCCTGCTAGTACCTGTCTCTTACCCTTGCC
ACTGCTGACTAGTTTACCGTCTACGCCTCGCAATGTTGCTACTCCTGTTT
CCCCCCCATCCTCACTCTTTTTTACCAATCCATTAATTCCCTGCCAAATC
TGTTTCACGCTACCCTCCGACCCCCCGTTCGCTTCCTGTCTGCATTCCGT
TGTTGGAATTCAGCACGTACTCTCTCGTTTCCCAGTCGTTCTACTTTCCA
TCTGAATGCCTTCCTCGTCTTCGTACTCTTGACTCTCTTGATACGTGTTG
TTTTAGCCCTAATAAGGAAGTGGTCAGTTGTGCCTATGTCTACCTTGCTT
ACTTGCAATCTTGGGATCCGCTTTTCTCTGTCTACCAGGATGTAGTCAAG
AATCGAGAATTCCCCGCAACTTGCCCGCTGTCTGGTATACTGCGGGGTGT
CCTCCCTACTCCTATTGCTTGTCGCCATCAGCTCGTTACTGCCTACGAAG
TCAAGCACTTTTCCCCGTTGGCATTTACTCGGTTTTCTCCGTATTGCCCT
CTCACCTGCCCCCCCCGACTAGCTTTCCCAACTCGAGAGTTGAAATCGCC
CACCATGACAACTTCTCCCCTCCTCTTGAACTTCTGAACATCTTCCCCCA
CTTGCTCGAAATTCTCCTGCGCCTTACATGCGACATTCTTCGACGACGGT
GGAATATATACATTCCCTATAAATAGGTCTAGCTCACCCCTTTCTCCTGG
TACCCTTATCCATAAGCTTTCCTCGAACGTCGTCTTTACCACAATTTCTA
TCAACTCAAACAAGTGTTCCTTGATGAGGAATCCGATTCCTTCCTCTCCC
TTTTTTTTCGGGGCTAAACCTTTCCGTGCCTTTCCAATCCACCGCTATTC
TCCTATCTTTCGATATCCCCATCTTTCAACTCCCATGACTCTTGGATCCC
TACCAAATCTAGCTCAGCCTGTTCTACTTGCTCAACTATTTCCAACCTCT
TGCGCTTGTCTCTCGCAAACCCGCACACGTTCCACGACCCTACTCGTAGC
TAGTGTTTGTCCCTATTGGACTCTGTCTGCACCCTTGCGCCCGCCTGCCG
CCTCGTCTTCGCGATCTTCTTACTTGGTTGACTAACCTTCCCCCCCCCCC
TGTTCACCTCATTCTTCATTCGTCCCTGCCTTCTTACCTTCTCTGATTCT
ATCATGTTGGCTGTGCAAACACTCCATCCCACCTTCCGTACGTATTTCGA
CAGCCTCTCAATGTCATCCTGCTGGTCCGTTTTACTATCACCTCTGGTCA
TTGTTACCCTGAAGTGATCATGTTCTCTACCTGCTTCCCCCCTAGCTACG
CAATGTAGTCCTTCCGTCACGCAGGCTTTCTTGAACTCTATCGTGGTCAT
GTCTCCATCGACTCCAAAAACTGGCAACTCCATCTTGTCTCCCTCGTATA
ACTTCGTCTCCCATCCGTTTTTGTACCGCACCCTTCTCATGATATCTACA
CACAGTAGTGGACCGTGGCCTCTTTGTTCGTTTTGGTTTGTAGGAACAAT
TACGGAATGCACGGTCTTCCCAATCCGAGCGTCCGGTGAGGGGTTATGGT
TCCTTTCGATTCTTTTGCCGGCTCACCAACGCTAAATAGCGCCTCCAACA
TAGGCTCGTAGTTTAGACCCAATTCCACACCTGGTGGGGGGCGGGGCGGG
GCATAAAGGGGTTGCGATTTTATTCGCCTGCCTTCGACGTATTTGCAATC
GAATTATAGCACGCCTTCGACGAAGTGGTTTATCGTCCTCATCCGTCACT
GACGGCCAGTTTCTCTCAATTCGCCGGGAACAGGTGGGATCCCAGACAGG
GCAAGAGACGGCGGCAGAGTTCGGTATGCCTTTTGTGGAAGTCAGTGCGA
AGACGGGGGCTAGCGTGAGGGAGGCTTTCATGTTCGTCACGACTCGGGCC
GTCACGGAGCGTCTCGCGCGCGAGAGGCTGAAAGGATCGACGAGTAGGTC
GGGGAATAAATCGGTGAATACGACAATGCAGAGCGTTCCCGGGCTGAAGG
TGAGCGGCGAGATGGAGTGAGGAAGATAGACAGACGGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGGACGAAAGGGAGGGGGG
CAAAGGACACCTGGCTAACCACGACCCACCTCTGCATGTGAAAGGCAAAT
ATCGGTCGGGACGAGGAAGGGATGTACAAATGCTCGTGTGCTGAAGGAGG
CGGGCAAAGGACGAGACTCCGCTTCCTGACCATCGGTCTTCGTACGTGGT
TCGAGCCCTCGTACCTTATTTTCCTGATGTCACCCTAAAAAGCGTTGGTA
CACCCACAACGCCTGTCAAGGGCGATACCCCCCCTTTCGCTGTTCATTTG
CCCGGGCGTTGTCGTATGTACGCACGAGTTCGGATATCCTCGTCGACGCC
ACTTCGAAGCGGAAATCGTCCTCGACAGCCGTTGTGGCGCCAGATCCTTT
TCACGGCTGGCATCCACCCAAGGCGGCGTAGAAAAGAAACGCGTTTCTCC
GAAGATTGCAAAGGACGCCGCTCATCGAACGGAGCAGGCTACCGCCGCTC
CATCACTCGCCCCAACTATCTTCGCATGATGACTCGCTTGTTCCACACCC
CATGTCAAACGCAGCGCGCCCTTCGAGCGAGAGCTAGCGTGATGGACGTC
TTCAAGGGCATGGCGGGCCGTCGCGAGCACCTCCGGCATGAACACGGAAG
TGAAAGTTTGAAACCCGAAGAGGCGAATGAGAACGGTGTCCACGAACGGC
GGGGACACCCTCAACCACCCCGGTGGTCGCCAGAGGAAACGGGGGGAGCA
GGCTGGGGCCAGTCCGGCGAAAGGACGACAGGCGCAGCGTCGACAAGGCG
AGGAATAAGACCGCGAAAATTTTCGTCGAGAGCCGACTATCTTTCACCTC
ATAGGGCGGTGACGGCGGCGAACTCCCCCGTGGCGCAAAGCGGAAGCGCG
GACGGCCCGACGGCAAGCTTGTCCAAAAGACCCACGACACAGAAAAGGTG
CGCCAAGGGGCACGGCGTAGTGTTCTGCACGTCCAGGCGGTGGCTCGTTG
TGCCATTTTGCCGATCCTATTGCTCGCGCACGGTGCTGCGCCCACCGGCC
TCATAACGGCACAGCCCAGACTTCACACTTTCGCTGCATCGCTCAGGTGT
TGATTGAGAGATTGAAGTGGCCTGTTTGGCGCGCCGAAGGTGTGAACCTA
TAACCCGCTCTAAAGTTCCCTATTTATTGGCGTGTATTTTCTTGGCCCTT
CGCGCCCTGTCCATGGGGTCCCACTGCTCCCCCTCGCGTGCAACGCGCTG
AAGCCCACAAAAACGGCATATTAGAACGCGATGTGTGGTGGTGTGCCCTA
AAATTGCTCCTTTCTCGGTTGAATATGAGCTGGTTATCATTTCGTAGGTA
CCGACTTGTCGCCAGATTGCAATTAGATACGTGGACGGCGCGAAAGTCGG
GTGGATACGAAGTGTGCTTTCATTGAAGGGTGAAACCGTCGTTTGAACAG
TGACCCCTCGTTGCAGACGATGAGATCTCCATCCTTCGTTACCGTGCCCC
GCCCCTCCTTGCTTTCCCCCTCTCGCCCCCCGCGCGCAGCATGCCCGAAC
GAGAGTCGACGGCCTTCGGAAGCAGCTCTTGCACTCCGCAATTGGATACC
AGCGGTGAACCCTTCGACTCTCAAGTATCTCGACTGGCAGCCAGGGCCAC
CGACACTCCCGGGGGGCGCCGGCAAGGCCCGTGGCTCGGGCAGCGAAGGA
ACCCACCCGGCAGTGGCCCGACCTCCACGCACACGCCCTCGCCGCCGACG
CCGTCGTCGCTTCGGTCGGCGTCGCCGGCGACAACAGCCGCATCGGCCAG
GCGACCCCGCGGGCTCCTCAACCCCTCTCAGGCACGGGTTGATCCCGCGG
TTCCCGGTGGTGAGCGTCCGGCGGTGGCCGCGGGAGGTGCGGCCGCGAGG
GGATATGGACAGCTAACCCATGCGGGTTGCGGCTCGGAAGGGGCGGACCC
GAAGACAGAAGAATACACGTCGCCGCCCTCGGCACCGGCGGCGGCGGCGG
TCGAGGACGAGGAGGATGATATCCTCTTGAAGGGAAGGCTCAGGAGGGCA
TCCCCGGAAAGAACGGCCGGCAGCGTCTCGCAAGCGACGATGGTCGAGGA
CAGCGCGGCGACGAAGCTTAGAGAGACCAGCAGTTTTTGGCTGGTGCGTG
GGAGGCTCCTTGACGTAGTGATGGCGCAATACCGTAGCCCATGGTTGGAC
GAAAAAGCCGTGCAGCATTCGGCCAGCGGGAGGTATTGCCCAACCCGACC
CCTCCGTCGGTTTTCCAGTCGAACGGAAACGGCGATCCGCCAACGCCGAC
CGCTGCCTCGCGCCTTGTCCAAATCAAACCCTTAGTCCGTTCTCATGTGC
TGCTCGCCGTAGCTCAACCCCCCTGGACGAAACCGCCTTGTTATGTGCGA
CTCGTCATCCTTTCGACATCTCGGTGACGATGCTAATTTTTCGGCTACGA
TCTCAAATTGCCGGCGTGGGTTCCGGCAGTCGATAATTTCAAGCATAACA
TTAAGCAAGCAAACATCTCAACCGCAATCCACCGCTGAACAAGTCGATCA
CGTTTCTACTCATCAACGTCCTCTCGCCCATCTAAAAGCGATAATTCTCT
CCCCCCCGCTTGAGATGATCACTCTCAGGAAGAAGGAGGCAGGTCAAGCG
TCCTTCACCCGGAAAGCTCGTAGAACGGAAAACCTCAAATGTGGTGTACC
ATGATCTACGTGAAAAGGAGAAAACGCTCAAGTACTGAGCCCAGATTCTC
TCTCTCCCGAATGCCCGTCCTCCCAAAACAACTTTCGCCACGAGCAGCGC
AAATGGGGCATCAAGGCTGCAAAGACGGATGCCACCCGAGGGAGGCACTC
GGTGATTCGTGGCAGCCATCCGCCATCGCCGAGATATGGTAGTGGGACCG
GAAGTCAATGAGGACGAGAGACAGTGACCCACGGGCTCGAAGGCGTCGAG
GGGGGACGCGGCATGCTGCCACCAACTCGGAAAAACGTGGACAGATTTTT
TTCACAGTTTGTGTGGCGTTTGAGAAGACTTGTGTAAGCACAGCGACGAC
TTTAAAGAGTACGCAGTACAGGTCCATCCCAAAAAATCACTATCGTGGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:2773645..2782043-

>mRNA_P-fluviatile_contig11.1233.1 ID=mRNA_P-fluviatile_contig11.1233.1|Name=mRNA_P-fluviatile_contig11.1233.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3072bp|location=Sequence derived from alignment at P-fluviatile_contig11:2773645..2782043- (Porterinema fluviatile SAG_2381)
ATGCCACGGCCTTGTTGCGCACGGGTAGTAGACGCGCTGTGCCCTTGTTT
CCGTCGTCGCTCGCTGTCCTCTGCATCGGGCGGCGTTCTCGGCAACCCAT
ACTTGAGTGTAAACCTCGTTCTGCACGGAGAATGCGAGGTCGGGAAGACG
AGCCTCAGAAACAGGTGGGTTGACGGCATCTTCACGGGGGACGTTGCCCC
GACAATTGGCGTGGATTTCAACATCAAGACTCTCGATCTAGTGCAAGAGG
TCGAGGACGAGGACGAGGACGAGGAGGGCGAATTGTCCGAAGCCCCAGCC
GAAAATCCGTCGCGGGTAGCAGCAAAGGGGGGCCTTCCGAAGAAGCGCCG
AGCACCTTTTGAAGACCTGCAGGTGAAGATTAATGTGTACGACACCAGCG
GCAAGCCTGGCTATCGAGATGTTAACAGCACGTATCTCCTGGCGTTCGAT
GCGGTCCTCTTCGTCTACGATATCTCCTCGATGGCGTCCCTGAATATGCC
ACGGCCTTGTTGCGCACGGGTAGTAGACGCGCTGTGCCCTTGTTTCCGTC
GTCGCTCGCTGTCCTCTGCATCGGGCGGCGTTCTCGGCAACCCATACTTG
AGTGTAAACCTCGTTCTGCACGGAGAATGCGAGGTCGGGAAGACGAGCCT
CAGAAACAGGTGGGTTGACGGCATCTTCACGGGGGACGTTGCCCCGACAA
TTGGCGTGGATTTCAACATCAAGACTCTCGATCTAGTGCAAGAGGTCGAG
GACGAGGACGAGGACGAGGAGGGCGAATTGTCCGAAGCCCCAGCCGAAAA
TCCGTCGCGGGTAGCAGCAAAGGGGGGCCTTCCGAAGAAGCGCCGAGCAC
CTTTTGAAGACCTGCAGGTGAAGATTAATGTGTACGACACCAGCGGCAAG
CCTGGCTATCGAGATGTTAACAGCACGTATCTCCTGGCGTTCGATGCGGT
CCTCTTCGTCTACGATATCTCCTCGATGGCGTCCCTGAATGAGCTACGTC
GGTATTTCAGCGACCCAGAACACCGCGACAAACTTGCGACTAAGAAAAGA
TCAGGCATGGCGATGTTGCTGGTCGGGAACAAGTGCGACGTTCCACTTTC
GCAGCGTCAGGAGCTACGTCGGTATTTCAGCGACCCAGAACACCGCGACA
AACTTGCGACTAAGAAAAGATCAGGCATGGCGATGTTGCTGGTCGGGAAC
AAGTGCGACGTTCCACTTTCGCAGCGTCAGGTGGGATCCCAGACAGGGCA
AGAGACGGCGGCAGAGTTCGGTATGCCTTTTGTGGAAGTCAGTGCGAAGA
CGGGGGCTAGCGTGAGGGAGGCTTTCATGTTCGTCACGACTCGGGCCGTC
ACGGAGCGTCTCGCGCGCGAGAGGCTGAAAGGATCGACGAGTAGGTCGGG
GAATAAATCGGTGAATACGACAATGCAGAGCGTTCCCGGGCTGAAGGTGG
GATCCCAGACAGGGCAAGAGACGGCGGCAGAGTTCGGTATGCCTTTTGTG
GAAGTCAGTGCGAAGACGGGGGCTAGCGTGAGGGAGGCTTTCATGTTCGT
CACGACTCGGGCCGTCACGGAGCGTCTCGCGCGCGAGAGGCTGAAAGGAT
CGACGAGTAGGTCGGGGAATAAATCGGTGAATACGACAATGCAGAGCGTT
CCCGGGCTGAAGCGCGCCCTTCGAGCGAGAGCTAGCGTGATGGACGTCTT
CAAGGGCATGGCGGGCCGTCGCGAGCACCTCCGGCATGAACACGGAAGTG
AAAGTTTGAAACCCGAAGAGGCGAATGAGAACGGTGTCCACGAACGGCGG
GGACACCCTCAACCACCCCGGTGGTCGCCAGAGGAAACGGGGGGAGCAGG
CTGGGGCCAGTCCGGCGAAAGGACGACAGGCGCAGCGTCGACAAGGCGAG
GAATAAGACCGCGAAAATTTTCGTCGAGAGCCGACTATCTTTCACCTCAT
AGGGCGGTGACGGCGGCGAACTCCCCCGTGGCGCAAAGCGGAAGCGCGGA
CGGCCCGACGGCAAGCTTGTCCAAAAGACCCACGACACAGAAAAGGTGCG
CCAAGGGGCACGGCCGCGCCCTTCGAGCGAGAGCTAGCGTGATGGACGTC
TTCAAGGGCATGGCGGGCCGTCGCGAGCACCTCCGGCATGAACACGGAAG
TGAAAGTTTGAAACCCGAAGAGGCGAATGAGAACGGTGTCCACGAACGGC
GGGGACACCCTCAACCACCCCGGTGGTCGCCAGAGGAAACGGGGGGAGCA
GGCTGGGGCCAGTCCGGCGAAAGGACGACAGGCGCAGCGTCGACAAGGCG
AGGAATAAGACCGCGAAAATTTTCGTCGAGAGCCGACTATCTTTCACCTC
ATAGGGCGGTGACGGCGGCGAACTCCCCCGTGGCGCAAAGCGGAAGCGCG
GACGGCCCGACGGCAAGCTTGTCCAAAAGACCCACGACACAGAAAAGGTG
CGCCAAGGGGCACGGCACAGAAGAATACACGTCGCCGCCCTCGGCACCGG
CGGCGGCGGCGGTCGAGGACGAGGAGGATGATATCCTCTTGAAGGGAAGG
CTCAGGAGGGCATCCCCGGAAAGAACGGCCGGCAGCGTCTCGCAAGCGAC
GATGGTCGAGGACAGCGCGGCGACGAAGCTTAGAGAGACCAGCAGTTTTT
GGCTGACAGAAGAATACACGTCGCCGCCCTCGGCACCGGCGGCGGCGGCG
GTCGAGGACGAGGAGGATGATATCCTCTTGAAGGGAAGGCTCAGGAGGGC
ATCCCCGGAAAGAACGGCCGGCAGCGTCTCGCAAGCGACGATGGTCGAGG
ACAGCGCGGCGACGAAGCTTAGAGAGACCAGCAGTTTTTGGCTGCGCAAA
TGGGGCATCAAGGCTGCAAAGACGGATGCCACCCGAGGGAGGCACTCGGT
GATTCGTGGCAGCCATCCGCCATCGCCGAGATATGGTAGTGGGACCGGAA
GTCAATGACGCAAATGGGGCATCAAGGCTGCAAAGACGGATGCCACCCGA
GGGAGGCACTCGGTGATTCGTGGCAGCCATCCGCCATCGCCGAGATATGG
TAGTGGGACCGGAAGTCAATGA
back to top