mRNA_P-fluviatile_contig11.1219.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1219.1
Unique NamemRNA_P-fluviatile_contig11.1219.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A6H5JXW2_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW2_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 3.530e-124
Identity = 217/353 (61.47%), Postives = 239/353 (67.71%), Query Frame = 1 
Query:  247 MDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELPDTNDYLSASEIAQVLRSTITRIVSAVARFAADQHSRASARTAKASSVPTSSIHGAATSGVVNDGGGYADHKPMPAAAATAPVGGENVGAAARDAAXXXXXXXXXXXXXXXXVGLGEGIXXXXXXGESAQGTASVAADDVVPAMSLNFCVTDGRHIVCSRYRNHPRQDPPSLFVLSGAGFVCEKEGSCLRLIAPGER 1305
            MD L+TKPEHSLVFQSRDASFHPGC DKRNIRVNGDGFGIAWYT RRIEEGGC+VKFPTPAWS  NLLNIAKFVES LVFAHVRAASDGAVLVGNVNHENTHPF+YKRYTFMHNGGIPGF +MKRQLLA LGDEAY TIEG+TDSE+CFA+FLDELP+T D LSA EI+QVLR TI RIVSAVA  +A             +  P++S H         DGG       +P AA                                                 S +G +S +A    PAMSLNFCVTDGRHIVCSRYR+H RQ+PPSLFVL+GAGF C++ G CLR  A   R
Sbjct:    1 MDVLVTKPEHSLVFQSRDASFHPGCADKRNIRVNGDGFGIAWYTPRRIEEGGCVVKFPTPAWSNTNLLNIAKFVESGLVFAHVRAASDGAVLVGNVNHENTHPFKYKRYTFMHNGGIPGFARMKRQLLAQLGDEAYLTIEGSTDSELCFAYFLDELPNTGDQLSAQEISQVLRRTIARIVSAVASLSASPCPXXXXXXXXXA--PSTSGH---------DGGPTTS---LPDAA-------------------------------------------------SVRGGSSASA--AAPAMSLNFCVTDGRHIVCSRYRSHARQNPPSLFVLAGAGFACDEAG-CLRQTATEPR 287
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 2.280e-118
Identity = 225/356 (63.20%), Postives = 241/356 (67.70%), Query Frame = 1 
Query:  229 MGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELPDTNDYLSASEIAQVLRSTITRIVSAVARFAADQHSRASARTAKASSVPTSSIHGAATSGVVNDGGGYADHKPMPAAAATAPVGGENVGAAARDAAXXXXXXXXXXXXXXXXVGLGEGIXXXXXXGESAQGTASVAADDVVPAMSLNFCVTDGRHIVCSRYRNHPRQDPPSLFVLSGAGFVCEKEGSCLRLIAP 1296
            MGA VPMD L+TKPEHSLVFQSRDASFHPGC DKRNIRVNGDGFGIAWYT RRIEEGGC+VKFPTPAWS  NLLNIAKFVES LVFAHVRAASDGAVLVGNVNHENTHPF+YKRYTFMHNGGIPGF +MKRQLLA LGD AY  +EG+TDSE+CFA+FLDELP+T D LSA EI++VLR TI RIVSAVA  +A                                               T P                    XXXXXXXXXX   G   XXXXXX                PAMSLNFCVTDGRHIVCSRYR+H RQDPPSLFVL+GAG  C++ G CLRL AP
Sbjct:    1 MGASVPMDVLVTKPEHSLVFQSRDASFHPGCADKRNIRVNGDGFGIAWYTPRRIEEGGCVVKFPTPAWSNTNLLNIAKFVESGLVFAHVRAASDGAVLVGNVNHENTHPFKYKRYTFMHNGGIPGFARMKRQLLAQLGDAAYLAVEGSTDSELCFAYFLDELPNTGDQLSAQEISKVLRRTIARIVSAVASLSAS----------------------------------------------TCPP-------------------XXXXXXXXXXXXXGHDGXXXXXXXXXXXXXXXXXXXAAAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAG-CLRLTAP 290
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A482RVP5_9ARCH (Class II glutamine amidotransferase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVP5_9ARCH)

HSP 1 Score: 178 bits (451), Expect = 1.840e-48
Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 1 
Query:  208 MCRLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDK---RNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGN---VNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDEL 714
            MCRL  Y G  + +  L+T P +SL++QSRDA++HPG  DK   RNI VNGDGFG+ WY    + +GGC  KF TPAWS  NL +I + V S LV AH+RAAS G   +     V+HEN HPF+Y R+TFMHNGGIP F ++KR L  LL +  +  I+G+TDSE  FA FL  L
Sbjct:    1 MCRLTLYKGKPMLIGDLVTNPSNSLIYQSRDAAYHPGVTDKTHRRNILVNGDGFGVCWY-GENVSKGGCCFKFVTPAWSNGNLRSIGEHVASHLVCAHIRAASSGHDPLHERVAVSHENCHPFRYGRFTFMHNGGIPYFARIKRPLQNLLHEAFFSEIKGSTDSEHIFALFLHYL 174
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A7S0DVN1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DVN1_9EUKA)

HSP 1 Score: 163 bits (413), Expect = 8.300e-43
Identity = 96/213 (45.07%), Postives = 124/213 (58.22%), Query Frame = 1 
Query:  214 RLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCP-------DKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELP----DTNDYL-----------SASEIAQVLRSTITRIV 786
            R L Y G  + + TL+  PE+S++ QSRDA F PG         DKRN RVN DGFG+AWYT  R  +  CL K   P+W   NLL +A  VES  +FAHVRAAS G   V     +N HPF++K +TFMHNGGI  F K+KR++  L+ DE +++++G+TDSE  F  FL  L     DT   +           +A EIAQ L  TI +IV
Sbjct:    1 RWLAYRGPPINLSTLVLYPENSIINQSRDAQFLPGLTYENQAITDKRNNRVNADGFGVAWYTKGR--KNACLYKSTQPSWGDSNLLELADHVESPTIFAHVRAASMGVASV-----QNCHPFKWKSFTFMHNGGISEFLKIKRRIQNLMEDEFFESLQGSTDSENIFYLFLSVLKRNLYDTKSRVKTVNMIQIEEATALEIAQALSDTIQKIV 206
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A7C5M289_9BACT (Class II glutamine amidotransferase n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7C5M289_9BACT)

HSP 1 Score: 155 bits (392), Expect = 6.590e-39
Identity = 82/182 (45.05%), Postives = 111/182 (60.99%), Query Frame = 1 
Query:  208 MCRLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELPDTNDYLSASEIA 753
            MCR + Y+GA +    LIT+PE+SL+ QS  A   P         +NGDGFG+ WY      E G L K  TPAW+  NL N+A+ VES+ +FAH+RAA++G V     + EN HPF+Y +Y  MHNGG+PGF+K+KR L+  L D  YQ I G TDSE  FA ++  + D +     SE++
Sbjct:    1 MCRFVAYLGAPILAADLITRPENSLIHQSYQARETPE-------PLNGDGFGMGWYNHALRPEPG-LFKAITPAWNNRNLKNLAEIVESNCLFAHIRAATEGGV-----SEENNHPFRYNQYLMMHNGGVPGFKKIKRDLINRLSDHYYQWINGHTDSEHIFALYMQRVSDRSGARQGSELS 169
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A7V2S6W7_9GAMM (Class II glutamine amidotransferase n=1 Tax=Aeromonadales bacterium TaxID=2268177 RepID=A0A7V2S6W7_9GAMM)

HSP 1 Score: 153 bits (387), Expect = 2.760e-38
Identity = 83/192 (43.23%), Postives = 117/192 (60.94%), Query Frame = 1 
Query:  208 MCRLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGG--CLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELPDTNDYLSASEIAQVLRSTIT 777
            MCR + YMG  + MD+LITKP HS++ QS  A+       +R+  +NGDGFG+AWY   R E G    L +  +PAW+  NL+N+++ +ES  + AHVRAAS G      V   N HPF +K+++FMHNG I  F+K+KR+   LL + +Y  I+G+TDSE  FA F+D    T        IA+ L +TI+
Sbjct:    1 MCRFVLYMGPSIKMDSLITKPTHSIIVQSYHAT-------ERDEPLNGDGFGVAWY---RPETGSLPALFRSVSPAWNNQNLINLSRVLESHCILAHVRAASPGLP----VTQFNCHPFTWKQFSFMHNGFIGDFQKIKRRARNLLSESSYNWIQGSTDSETFFALFIDHYQQTTSDSETDRIAKALLATIS 178
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: F0Y652_AURAN (Glutamine amidotransferase type-2 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y652_AURAN)

HSP 1 Score: 149 bits (375), Expect = 2.710e-37
Identity = 83/196 (42.35%), Postives = 109/196 (55.61%), Query Frame = 1 
Query:  208 MCRLLCYMGAV-VPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTP----NLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDEL--PDTNDYLSASEIAQVLRSTI 774
            MCR L Y  A  + +  L+    HS+V QS    FHP C DK N+R+N DGFG+ WY  R       + +  TPAWS      NL  +A  V S   FAHVRAA+ G+V    V+ ENTHPF+Y R  F HNG I GF ++KR+L+  L D     ++G+TDSE CFA  L +L  PD  D    +E+   +  T+
Sbjct:    1 MCRWLVYCSAEPIVLADLVLNSHHSIVRQSFSGGFHPDCSDKNNMRMNADGFGLGWYGLRESGASAAIFRSITPAWSCAWSNRNLRELAGVVSSRCCFAHVRAATPGSV----VSEENTHPFRYGRLLFQHNGHIEGFARVKRRLIEKLPDGLLAWVDGSTDSEYCFALLLAQLERPDRADRFPVAELEFAVLRTL 192
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A7C5ABP5_9BACT (Class II glutamine amidotransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5ABP5_9BACT)

HSP 1 Score: 150 bits (379), Expect = 3.480e-37
Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 1 
Query:  208 MCRLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELPDTNDYLSASE-IAQVLRSTITRIV 786
            MCR + Y G  +P+D +IT+P HS++ QS+D++        R+  VNGDGFG+AWY        G + +   PAW+  N+ +I++   S LV AHVRAAS   + V +VN    HPF + RY FMHNGGI  F  ++R+L+  L D AY+ +EGTTDSE+ FA FLD L      L AS+ IA  +  TI  IV
Sbjct:    1 MCRFVIYSGPPIPLDHIITRPAHSIIQQSKDSTL-------RSEPVNGDGFGMAWYVPSVSPHPG-VFRSIRPAWNNRNVRSISRVTTSGLVAAHVRAASP-ELPVADVN---CHPFTFGRYAFMHNGGIARFRSLRRRLVDCLSDAAYEGVEGTTDSEIAFAMFLDRLDVQPSDLPASDRIANAIEKTIHDIV 182
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A654DZL9_9BACT (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DZL9_9BACT)

HSP 1 Score: 147 bits (371), Expect = 4.950e-36
Identity = 76/193 (39.38%), Postives = 114/193 (59.07%), Query Frame = 1 
Query:  208 MCRLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDELPDTNDYLSASEIAQVLRSTITRIV 786
            MCR   Y G  + + +LIT+P HSL+ QS +A        +R+  +NGDGFG+ WY +  I       K  TPAW+  NL+ +A+  ES+ + AHVRAA+ G      V+  N HPF Y++Y FMHNG I GF K++R+++ LL DEA++ ++G+TDSE  F    DEL   +      +++  L + I ++V
Sbjct:    1 MCRFTFYQGKPIRIGSLITEPTHSLIHQSFNAL-------ERDEPLNGDGFGLGWY-NHSISNSPAFFKSVTPAWNNRNLIQLARITESTCIMAHVRAATQGL----QVSENNCHPFSYQQYAFMHNGDIGGFHKIRRKIVQLLSDEAFEELKGSTDSEHFFCLVQDELKKRDTLPPHDQMSSSLMAAIRKVV 181
[Close]
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Match: A0A0H5R783_9EUKA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R783_9EUKA)

HSP 1 Score: 147 bits (372), Expect = 8.120e-36
Identity = 84/175 (48.00%), Postives = 106/175 (60.57%), Query Frame = 1 
Query:  208 MCRLLCYMGA---VVPMDTLITKPEHSLV---FQSRDASFHPGCPDKRNIRVNGDGFGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAASDGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQTIEGTTDSEVCFAFFLDEL 714
            MCRLL Y G     V +  LIT+PEHS++   +Q R+       P+     +N DGFGI WYT + I+   C+     PAW+  NL  +   + SSL+FAHVRAA  G+     +   N HPF   RY FMHNG I  F K+KR+L+A LGD+A+Q IEGTTDSE CFA FLDEL
Sbjct:    1 MCRLLVYKGLNHQPVLLSNLITRPEHSIIKQAYQCRERQEGTHLPNA----LNADGFGIGWYTPK-IDWTPCVFTSTLPAWNNRNLNRLCAKISSSLIFAHVRAAGQGSP----ITETNCHPFVAGRYMFMHNGHIAEFSKLKRKLVASLGDKAFQIIEGTTDSEHCFAVFLDEL 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXW2_9PHAE3.530e-12461.47Glutamine amidotransferase type-2 domain-containin... [more]
D8LKF2_ECTSI2.280e-11863.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RVP5_9ARCH1.840e-4852.57Class II glutamine amidotransferase (Fragment) n=1... [more]
A0A7S0DVN1_9EUKA8.300e-4345.07Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7C5M289_9BACT6.590e-3945.05Class II glutamine amidotransferase n=1 Tax=Flamme... [more]
A0A7V2S6W7_9GAMM2.760e-3843.23Class II glutamine amidotransferase n=1 Tax=Aeromo... [more]
F0Y652_AURAN2.710e-3742.35Glutamine amidotransferase type-2 domain-containin... [more]
A0A7C5ABP5_9BACT3.480e-3744.33Class II glutamine amidotransferase n=1 Tax=Planct... [more]
A0A654DZL9_9BACT4.950e-3639.38Glutamine amidotransferase type-2 domain-containin... [more]
A0A0H5R783_9EUKA8.120e-3648.00Glutamine amidotransferase type-2 domain-containin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2649690..2663006 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score385.6
Seed ortholog evalue3.9e-104
Seed eggNOG ortholog2880.D8LKF2
Preferred nameDUG3
KEGG rclassRC00408
KEGG koko:K01836,ko:K14262,ko:K18802
KEGG ReactionR08193
KEGG Pathwayko00520,ko01100,ko01130,map00520,map01100,map01130
GOsGO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0009056,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0019538,GO:0032991,GO:0034641,GO:0042219,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044424,GO:0044464,GO:0051186,GO:0051187,GO:0061672,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368
EggNOG free text desc.glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EggNOG OGsCOG0449@1,KOG1268@2759
EC5.4.2.3
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons7
Model size2093
Cds size1608
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815469.9809878-UTR-P-fluviatile_contig11:2649689..26499671622815469.9809878-UTR-P-fluviatile_contig11:2649689..2649967Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2649690..2649967 -
1693561930.979135-UTR-P-fluviatile_contig11:2649689..26499671693561930.979135-UTR-P-fluviatile_contig11:2649689..2649967Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2649690..2649967 -
1622815470.0713997-UTR-P-fluviatile_contig11:2662799..26630061622815470.0713997-UTR-P-fluviatile_contig11:2662799..2663006Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2662800..2663006 -
1693561931.2307236-UTR-P-fluviatile_contig11:2662799..26630061693561931.2307236-UTR-P-fluviatile_contig11:2662799..2663006Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2662800..2663006 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815469.9993517-CDS-P-fluviatile_contig11:2649967..26510261622815469.9993517-CDS-P-fluviatile_contig11:2649967..2651026Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2649968..2651026 -
1693561930.9920526-CDS-P-fluviatile_contig11:2649967..26510261693561930.9920526-CDS-P-fluviatile_contig11:2649967..2651026Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2649968..2651026 -
1622815470.0094001-CDS-P-fluviatile_contig11:2652249..26523211622815470.0094001-CDS-P-fluviatile_contig11:2652249..2652321Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2652250..2652321 -
1693561931.1757991-CDS-P-fluviatile_contig11:2652249..26523211693561931.1757991-CDS-P-fluviatile_contig11:2652249..2652321Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2652250..2652321 -
1622815470.0187314-CDS-P-fluviatile_contig11:2652807..26529301622815470.0187314-CDS-P-fluviatile_contig11:2652807..2652930Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2652808..2652930 -
1693561931.1847816-CDS-P-fluviatile_contig11:2652807..26529301693561931.1847816-CDS-P-fluviatile_contig11:2652807..2652930Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2652808..2652930 -
1622815470.028411-CDS-P-fluviatile_contig11:2653540..26537301622815470.028411-CDS-P-fluviatile_contig11:2653540..2653730Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2653541..2653730 -
1693561931.1929677-CDS-P-fluviatile_contig11:2653540..26537301693561931.1929677-CDS-P-fluviatile_contig11:2653540..2653730Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2653541..2653730 -
1622815470.0379605-CDS-P-fluviatile_contig11:2654956..26550541622815470.0379605-CDS-P-fluviatile_contig11:2654956..2655054Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2654957..2655054 -
1693561931.2022905-CDS-P-fluviatile_contig11:2654956..26550541693561931.2022905-CDS-P-fluviatile_contig11:2654956..2655054Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2654957..2655054 -
1622815470.049329-CDS-P-fluviatile_contig11:2655662..26557261622815470.049329-CDS-P-fluviatile_contig11:2655662..2655726Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2655663..2655726 -
1693561931.212063-CDS-P-fluviatile_contig11:2655662..26557261693561931.212063-CDS-P-fluviatile_contig11:2655662..2655726Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2655663..2655726 -
1622815470.059215-CDS-P-fluviatile_contig11:2662797..26627991622815470.059215-CDS-P-fluviatile_contig11:2662797..2662799Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2662798..2662799 -
1693561931.2214146-CDS-P-fluviatile_contig11:2662797..26627991693561931.2214146-CDS-P-fluviatile_contig11:2662797..2662799Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2662798..2662799 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1219.1prot_P-fluviatile_contig11.1219.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2649968..2662799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1219.1

>prot_P-fluviatile_contig11.1219.1 ID=prot_P-fluviatile_contig11.1219.1|Name=mRNA_P-fluviatile_contig11.1219.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=536bp
MCRLLCYMGAVVPMDTLITKPEHSLVFQSRDASFHPGCPDKRNIRVNGDG
FGIAWYTSRRIEEGGCLVKFPTPAWSTPNLLNIAKFVESSLVFAHVRAAS
DGAVLVGNVNHENTHPFQYKRYTFMHNGGIPGFEKMKRQLLALLGDEAYQ
TIEGTTDSEVCFAFFLDELPDTNDYLSASEIAQVLRSTITRIVSAVARFA
ADQHSRASARTAKASSVPTSSIHGAATSGVVNDGGGYADHKPMPAAAATA
PVGGENVGAAARDAAAGAGGPGGGGCGGGGSVGLGEGIGAGGAGGESAQG
TASVAADDVVPAMSLNFCVTDGRHIVCSRYRNHPRQDPPSLFVLSGAGFV
CEKEGSCLRLIAPGERVRPGILLSMSTSLALLCLALLVVALLRFGVLQYV
FFALALTCSGLVCPLLCCAVLCCTQWCFAFGLLGFVRLPFALHCAPTSSS
VYSVLGPTGFTATVLTCALSEFELLNDVDFASRVVLFTQRGGRDVQGGLV
ECPRRRRPSRPLTPCDHDAKMWRPPLLVTQRGLLL*
back to top

mRNA from alignment at P-fluviatile_contig11:2649690..2663006-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1219.1 ID=mRNA_P-fluviatile_contig11.1219.1|Name=mRNA_P-fluviatile_contig11.1219.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13317bp|location=Sequence derived from alignment at P-fluviatile_contig11:2649690..2663006- (Porterinema fluviatile SAG_2381)
GCGACTCTAGAAAACGGACATCATGCACACCGGTCGCCCAGCTTCCTCCC
GCCTCTCCCACCTTCCCTCTGGATTTGTAAAAATTTTCGCACACGTTAAG
AGGTGAACGGAGAGGTGTACTTGCAGACTCATTCGCAGCTGCTTGACCGC
GAGAGAGAGAGAGAGAAGGCGCGAGAAGGGGGCATTACGACACTCGGGGC
CAGAATCATGTGAGTTTTCTCCTGATGCTAGCTTGAAACGCCTTCGACCT
GCCTTAACTACCTTCCGTCGAGCTTCTGCATCGCGGCATCCTCCTCTATT
ACCTCCTTAGCGCTCATTTGCTGGCCAAGGAGCTGTGTGCTGCTGTTTGC
TGTTTATTCGAAGTCAAAACATTACACGAAGACAGGGCGCCTGTTTCTTT
ATTCCATGCAACCGTGTCGAAATCTCCAACTTTCAACTTTAGCAGCTGCG
CTTCTTCGTATTGGATAAACCGTGCGCGCGGCCACCCGCCCTGCCGCGGA
GCGTTGTGAAGATCGTGGCAACTTGATGTCTTGATGCGGGGAGGAGTTGC
CCGGGGATTAAGCTTGATTAACAGGGCCGGAGAGCATCGCAAGGAGGAAG
AGCCAAGTGACGACCACATTTGAGGGCCCCCGAGATGGAGACCTAGGAAT
CACCCCATACCCGCTTACGTAACCCCGCGACGTTCCCGACCGATATTCTC
CCAAACTTCCTCTTCGAACACACGGAGATCAAGTCCCTCACACCACCAAA
TGCTGACGCGAGTATACGTCCAATAGTCCCCCCTACTCGCCGCATTGTTT
TGATCACAAAAACTCTCACCGAACCAGCCTGAAATAACACTTTGATGGTA
CTTCTTTGCGCGGATCATCCGGCCGCAGTTGTGCAGGTCCTTGTGTAGGT
CTTATGTCTTCCTTGTCAACCCTGTCTTGCGCTGCATGCGCTCGACACAC
TGACTGTGATTCACACATACGCTTGAGGGCTTAGTGGATACATGGCGAAT
ACGAGGGTAGTGTAATGTAGCCCTTGCTGCATCTGTCACGAGTTCACGTC
CAGATATCATTACACTACGGAAGCTCGATGAAATATGTTACGATTTAGAC
CAGGACAAGTAAATCCCACCCAACCGCCTCAACGAAGTTCACTTGAAGTG
CATCATGTAGTTCCGGTGCGTCTGGAAGGACTCGCTGGGCAGAATCTTCG
GGAGAATGTCTACGCGCTAAAGCTGCATCGGAAGGGGGAATCACCTCAAA
CACCTTCCTCTCGACAAACTTTCTGAGGAAGTGGTGGCTCGCATCGATGT
GCTTCGAGTTCGAGTTCGACACCGGATACTGCGCAAGTTGAATCGCTCCC
TGACCATTTTCTCGAAAGCGAAATGCGGGGCGTCTCCGCCTTCGGGAGCA
TGACACGCCAAACATGCTGAAAAGCAGACCCTCCTTCTCTCGCCCAACGC
AACTTGCTCGACTCCTGTTGTCGAGCTTAATCTGCGTCCTCAAAAACCAC
ATCACTGCCCCTGGCACCGATATCCGATCTGCTGCCTTACTTAAAGTAGT
CAGCGTCTGCGAAGGCAATCAATCTAATTACTGTCCCCCTCTGAAACGAA
ATTCCACAATAACTAGTCCTACGTGTCCTACACATTAAGTCACTGCCCCT
GACACCGATATCCGATCTGCTGCCTTACTTAAAGTAGTCAGCGTCTGCGA
AGGCAATCAATCTAATTACTGTCCCCCTCTGAAACGAAATTCCACAATAA
CTAGTCCTACGTGCATATCCTGGAATCCCAAGTGCGACTTTCCCATGCAC
AAGCTTCGGTGACGCGCCCTCACCGCATTCGAAATATCAAGCCTGGTCTG
CGTCGACAAGCACATGACCCGATGAACTTCCGAAACGGACATTTCACATC
TGGCTCGTCTCCACGAAACTTCGAAAACCTTGTTCCTACTCTACCCCGCA
CTCTGTCCCCATCTTCTCGGTGTAGGCCTGCTGAGAAACCGTCAACCTGC
CGGCCTCCTTGTCTCCTTTAAAGAAACATCCAGAGTACCATCTCAACTTC
CCAGGTTCTTAACCGGCACCATGTTAATCAAACCCTCACCAAGTTTGTCA
CGCCTCTCCCTCTCTCCAACGCGGAAAATATCGTTTGCTTGAAGTTTAAA
AGTCAGCACTGCACTACCGTCTTCACCAGACGAAAAATACAAGCGTCGGT
AAAACATTGCTCAAATCTCAACGCGACCAGACATGTCTTAAAGTCACATG
TCATCGCCTGAGTACATGCTTCAGGTAATGCCAGACTACGCTATACAGCC
TTGCGGCGATCGCACATGTCTCCTTCCAACTCCGAACGCACGAAAGCATG
CTTTATGTCAAAATGACGCAAACTCAAGATTCAACTGACATGCCAAAGCA
GCAGAAGGACCCGAACACATGGAAGAGAAACAGTTCTAAAATCAGTTTAC
CCTCTCTGCCTATCACTGCGCGCTAAAAGTCTTGCTTTCACCTCGTGGGC
CAACCATACTCACCCGCCTTCCAGTTTTACACCCACTTCGCGTGGATGTA
ATTCGGAAGTGATTGCTATAAGGCAGATGAAAACAGTCCCGCTTTTAGGA
GGCCGAAACTCACGCTCACCCCACCTTTCCACAACTCGGCATATTCGCTT
GACAACAGCCTCCTTGTACGATTTCGGGACGCAAAGTCGCTCGCCAGGCA
GTGGAGCAGATCGTAGCGCTGCTCCACTGGTTTTTCGTCCCGAAAAGCGG
ACCTCAAGGTTGGCGAGCAACGTAGCCATGACGAAGCGGACGCCTCGCCC
GCGTCCATCTTCCACGCCCCCCCCCCGCCCTCCTTGCCTCACACTCTCCG
CTGGAGTCTGCTCCGCTCGCCTCGGGTCTCGTCACCATGGATTCACTCCG
CTCGGCTCTCCGGCAACAATGGCGAGTTCGAGCTCCTTCCACTCATGCTG
GGCAATATGCTTGGCTTCCAGCATTGGAAGAAGAAAGTCTCGGCCGCTGT
GTGACAAGAGACAGGAAGCCCGCACTGTGGGCGGCGTTCGGCAACGATAG
GGGCATCGCCGCCGAATTCTAGGAGCGCAGCCGATGCTGCAGGCGACGAT
CCGGGGGAGGCTGTCATCTGTAGTTACGGAGTTGCCGTTGCGCATGTGCA
CTGCGCGGAGGTGCCGTAGAAGCGGGCGTGTCGAACGTGACCCTCATCCG
AGCAGCTGGCGCGTCAATTGCCTGGGACGGCGACGATGCGGTCAAGGGGG
ATGATGATGATGCATCCGGCGGCTGCGGTGCGAGATGGTGGACAGCGGTC
GCGATGATGCGGCCGAGGGAGAAGGGGATCCTCCCCCCGGCAGCGGCGGC
GGCGGTGAGGCGGCAGTTGGCGACGGCGATGACGAGGCCGGCGGCGCTGT
AGGTGGCTCAGGCATGGCGAGGGTGAACAACACCGAAGTGATCGATGACG
CAGGGGGCGGCGACCGTGCGGCGGGGACATTGATTCTCCCTTTGCCCTGT
GGCACGGTTGCGACCCAGGCGACGTTGCTGGTGTAGCACACGCGCCCGGT
CGACGCCTTGACGACCTTGACGCAGGACGATGGGTGGTTGTCGCCCCCGT
TGAGGTAGAACACAAGCTCCGCCTGGTCTTCGAACTTGTTCTTGCGCTCC
ACCCGCGTGTACCTTGATTGGGAGAACAGGAAGATGCGGAACGGGCCTTT
TCAGCCGGTGAAAGCCTCCTTCGGCGACATGTTGCCGCGATTGGACTTGG
TCGCGAACTGGGTGATCGCCTCGGCCGCCCACTTTCGTGGCTAGAGCCAG
TGCTTATCGCGCCCCTGTCGAGACCGGGGATGGCGTTGGAACGCTCTCCC
AAAACGCGGGCGGCGCTACGGACGGCAGCCTTCGATGCCTTGGTGACACG
CCCGGTCGCGCTCTCCGCGTGCCGTTGGTCTGCGGCACGCCCGGCGAGTT
GTATCGCGGTGTGGTTCCGGCGGCGTCGCAGTATTTGAGGAAGTCCTTGC
TCGAGCACTTGGCGCCATTGTCCACGCAGACGCTTCGCACGTTGCCGTGG
CCGCAGACGGCAGTGTCCGCAATGTACTGACGCAGAACCTTGGTCCCCGC
GGACTTCCGCCGCAGCCCGAAGACATTCAGGTGCCGCGTGCCGCTGTCGA
TGGCTAGGCCCTACGTGAGGTTACCCCCCAGCGATGGCATGCTCGGCCCG
GAGAGGTCGAGGTGAACACGCCCCCTTACGACAGCACCGCGCGCTGCACC
GGCGCCCGTGAGACGTCAGCCCGCCGCCCCTTGGAGACCGTACAGTGGTG
GCAAGGCTCGAGCGTCCCGGCCAACTTCAGACCGTGCTGCTTAGAAGTTT
CTCGCAAAAGAAGTTTGCACAAGTGGCCGTTGGAGCGGTGTGAAAATGGA
TAATATCTAAGTCCTTCTTGGTGAAACCGACGTGGAATGGGGCGCCAGGA
CCCAGCGCAGCATTTCTCACGTCAAACATGTTACCCCGTCTTTTGCGTCA
AACTCATCCACCTACCTCTCGGCATCCTACTCTTGCATGACCAGCGAGAC
TTCGCCCATCTGCAGGGGAAAAATCGACTCCGAACCGTCCATGTTTCGCT
GTTGTATGTTCATGTCCCAAACAACAGCAGTCACAGAGATGTAGTTTTTG
TTCCCAAGCCGCACAAAACGCTTGTGCTCGGGAGTGTCTGTCGTGATGGT
GTACATGTGCATGAATGCGGGGTCAATGTGTAGTGCCCCGCGGCTCCCGA
GTCCCCGATGAGCATCTGCAGATTAATTTTCCTGCAGATTATTTTTCAAG
ATTGAAATCACTCCCGAGCTACTCTGACTAGTCAACGCAGAATCACACTC
GCGCACAATGCCAATCCTCCCACACCTCGTGACACGGAAAGTGCGTGCAC
GCGTGCAGGAAGCCGCGAGGGGAACCAGGCGCGCCGGGAGAACACGACAA
AGGCGACGGGGCGTTGCTGCTCGAGGGGGCACGCACCTCCAGCTGCTGCT
CTTCACTATAGCCGTCCGCCTGGAGGTCAGCGCCGTATCTAGCCTATCTG
TTGCCACTCCACCGGCGGGGGTGATAGGAAGGCGGAGGGCCATCCTCTCA
GAACCCCCCCCGCCCCACTCGTCGTAGTGGCTGCCCTCGTATCCGCCGTC
ACCTTCCGGTCCCCACCCCTCGACGACCGAGTCTCCTTAGTGCTCGTGTC
TCTCGAGGCTTATCTTGGGGCTGTGGAAACACGCGGCCCTCTCCTCCATA
GCCCCCACCTCCGTAGTACACGGCTCCGAACGGCTGAGCATCGCAAGCGC
GGTCTGGCTGCCGCTGCTGCTCCTGCTGTTCGCGAGGTGCGCGATGCGGT
GGGCCTCCACGACCCGGGCCACACCCGAAACGACGCTCCGGGGTCCCCGC
GGCCCGGGAGAGGGCCTCCACCTGAAGAGCTCCTGCCAGGCATCGGGCGG
CTCAGGGGAGGACGGGAGTACCTACGGCCACCACGACTGCCGGCGCCAGC
TTGCTGCATTCACTCGCCCCCCCCCGATCCACGGCAAGGGCAGCCGCCGT
CGCGCATCGGGATACCCTCCCCTCGCGGCGGAAGGTCGCTGCCTAGCCTC
TCGTCGCTCGGCTCCGGCCAGAGGCGGCTGTTCTGGTACAAGCATTCTTT
ATCGCTGTGCCTGTCGGTTTTGTGGTAGTTGCAGTAGACGGCGGTTTGGA
TTCCGCCGCCAGCTGATCTGGACCAACCGCTGCTCCTCCGGTCACTCCTC
GTGTCCCCCCTGCCCCAGCTGCCCCGACCCATGCCGGCGGCGGCGAGGGC
GTGCCCCACGTCGTTCATGTCCTCCTCCCGGTTGATCTTCATGTCCTCGG
CGGCCTCCCGCATCACGCTTTCGAGGACAATATTGGTCAACTGCGAAGCT
TGGACGAGCAACACCGTACGTTGAACGGAAAGTTTTGAAGAGTTCGTAAC
TTGGCGTCAATGTTGCTGCTCCCTAAAAGTCATACCGAGGGAAGCCAAGC
GCATTCGAATCGTCCGGGCTCTCGCTCAAAACTCCTGGGGCGACTCTCTC
TCTCATTCATGCCAGCATCTGCCAGTCCCCTCTCGGAACTCGCGCTCTAC
CTCTTGCCTCTCCCTGCGATTGCCGCTCACGGTTGATGAGAAATACCACG
TTCAATCATAGACGGAGCCCTATTTGCACCTCCGCTGCTGTTCTTGATTT
GGCGGCCGTGTGATCATTTGATCCACAGTGTTGGTTTCTTCAGCCGTGTT
GGGTGTATGGTTGCATGGCCAAAGCAAGGCCAATACGAACAATATTGACA
GAGAGGGAGGGAATCTGGCGAGAGATCCTTCTCCTCGCTTTCGAAACCCC
TGGACCGTACAGCGTGAGCATGAGGTTTCCCGTCGCGATTCGCTCTTCGA
AACAAGCATAGTGCAAGCCCACTCTTCGCAGCGCCAACCCGCTCCAAGAT
CGTCGGGTCACATCTCATACCGTGCTGCTGCACGGCTTCTCTTGCTGATT
GATTTTCCGGCGCGTTACGAAAACTTACGAACATGTCCAGACCGCCTTCG
TTGGTGACATGATTGTGTCGGTGCCGGGCCGTTGCCCGATTTCGTTGCTC
CAAGCAATGAGAAACCATCGTCCATGCACCAGACAAGAGCGTCTGCACGA
CCCTACCCTGAGCACCAAACAACGCATCCCCCATGGGAGTTGGTCACAAT
CGGAGTGACGCGGTATCTACGCCGTACCTGCCGGATTCTGCGCGAGGAGG
AAGTTCTCGTCCGTTCTTAGGAGTAGTTTGTGGACGGAAAGCCCCGCTGC
TTTCTTTCGACCCACCCCTCATTCGGTCTTGGACCCCCACTGGCTCATGG
AAAGCTCCAATCCTGCAAAACCGAAGCGGCGATTTGCATGCCACGTTTGA
TGAAAGAACACGCCCTCTGTGAGGCCACGCTAACAGTTGTGGAGATGGGG
AGCTGCGCCGAAAGTACTGAGAAGACCTCTTGATTGCCCGATTTATAGGA
AATTTCATCAGCGCAAGCTCCGGATATATCAGTGTCCGACGAACGAAACC
TCACAATATGATGCGTGCACGTCTGGCCTGCGAAGCTAACCTCCTCTCCC
CCAACAGCCCCAGCCACCGCTGTCTGTTGCCGGGACTCAAACCCACTACC
CGACTCATTTTTGACAACCCTTCACCTGCCTCAATCCTGTTTCGTCAAAG
ACGAGCCCACCCAACTATCTTACCCTGCGCGCTTTCTCCCCACCACCCAC
GCATTTGTTGTGTTCGGCCTCTCCTTTCAGGTGCCGGCTCCTTTGCTACA
TGGGGGCGGTTGTCCCGATGGACACACTTATCACGAAACCCGAGGTGCAA
GCACAGCTGCGCAATAGCTCTCAAGTCTTGTCCGCTTTCCCTGTGACCCT
GGTCCGACAAACTGATACTTAGTCGGTGGCTATTTTTTACCATAGGGTGT
GCTGGTAGGTGTAATACGTCTTGAGTTTACTTTTCGGGTGTTGTTCCCCC
TTATCCTTTACCGTCCTCCCTTGAGAGAGGCCCCGACCCCTGCCATATAC
CTGTCTGCTTGGCGCGTTGTCCAGGCGTTTCATTTACACTGAGAGGGGGC
TGGGAGGGAGACGGTAAGTATGCGCCACGGTCCGGGGCTTTCCGATGACT
TTCTGTCGCCGTGAGGATGTCGCGCACGTGAAGCTCTGTGTGCGACCCCT
CTGTTGGTCTGCCGCTCACTCTCACTCTCTCTGTGTCCCAGTCTGTTGTC
TATTTCTTCGTCGCTTGCACACGCATCCCGACGCTCTCGTGTTTGCGCCG
TCGCTCCGCCCGATCCTTTCTCCGACGCCCGTTTGTACCCCCCGCCCGCG
CGACGCCCTTCCTGCCCACCTACGCTGTGCTCCCCACGCCAACCGCATTC
CGCGTCCACCCCGTGCGCCACCTGCTGCCTTCTCCCCCTCTTGCCTGAGC
AGCACTCGTTGGTTTTTCAATCCAGGGACGCGTCGTTTCACCCCGGGTGC
CCGGACAAGAGAAATATCCGCGTCAACGGAGACGGGTTCGGGATAGCCTG
GTCAGTCTTGTAAAACTGTGTGAGAAACGAATGCGTGGCGCTCACCAATC
GAAAGGCCAGTGACGTTGTCGTAGCTAGCATTTGTCTTGAGTCGTGCTGC
TGATACCTGTTTTGTCGTGCAGACGACGACGAAGGTCGTCCCCGTGGTCA
CAATCGCTTTCGCACGACAACCGTGTTCAGAATCGTGTGTGCACCACGGG
ATTCCATTACACAGGGAAAGGATTAATGGTTGCAGGGATAGCGCTGTCGG
GAGATTGAGGTAGAAAGCCAATGGTCACTTCCCTTTGTTTCGTTCAACAA
CCGACGGGCTGGCTGAAATGAATCTTGGAAACGGAGAAGCTCAGATTGAC
GTCGAGATATTTTGTCCACAATATCAAATGACGCGCGCCAGTTGTGGAGG
TGCTCAAATGAGCCGCTACGCAAACCTTTGAGGCACGTTTGCCTCTCGTG
CTCCGCCACAGCGCTCACGTGAACCGTTGAGGTCGAGCCGCGCTAATGTT
GCGTGAGTTCAGGCGTCCTCCAAAGAGGCAAAGCGGATTTTGCGGCACGA
GCGAGTATCGTGTATCGGGGACGACATCCGTCGACATATGTCGAGGATGG
AGGACGACCTGACAAAGAGTTGAAAGAAGCAAGCGCTGGCTTGCGTCTAT
GCTCTGTCTCTCTCTGTCGTCTGTCTGCCTGTCTGTCTCTCTCTGTCTCT
CTGTTTCTCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCT
GTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCCCTCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTC
CCTCTCTCTCCCTCGCTCTCTCTCTTTCTTTGTCTGTCTCTCTCTGTCTG
TCTCCCTCTCACGTTATAGCGAAATGGTTCCAAGCGAACGACTCGACCAC
GGATTTTGCTGCAATGTGCTGTCGTTCCCGAACGAACAACACCTACTTTC
CCCTATTCCATCGCCCCAGTCGATGTTCGAAGATATGCGTGGTGGATTCA
TTCAGATGAACTGAAATGCGCCGCTCCAAGCCCCTCCCGTCTCAAAAGAC
TTAAGGTTATGATAGCACCAAGTGAGTACCCTCCCCCGCGCCCTTCCTCT
TGTCCGCGGGGCGCCTTTTTCAACAGGTACACTTCGAGGAGAATCGAGGA
AGGGGGATGCCTCGTCAAGTTCCCGACCCCGGCTTGGTCCACCCCGAACC
TCCTCAACATCGCCAAGTTCGTGGAGTCCAGCCTGGTGTTCGCGCACGTG
CGGGCGGCGTCGGACGGAGCGGTCCTCGTCGGAAACGTGAACCACGAGAA
TACGCACCCCTTCCAGGTGAACAACTGTAGTTTTGCCTGGGTTTGTGATG
CGCGTGTTTTTTCCCACGAAGCGATACGTATTGTCGAAAAACTGAAACCG
CGAGAAACCACGCCCCTCCTTTCCGGCACCGTGGGCTAGATACGACCAAG
TGGTCTTGATTTTGTTTGGAATTGCCGCAAGGTGTCAGCGTGGCAGCCGC
AGACAAAAGGTGTCAGCCTCTGGACGCACGTTCTGGAAGGTTATCGATAT
ATGCTGCAGACACTTTGACGAGGGCTCGGGACCATCCCGGACCTTTCAAC
GTTGCCGAACAGCGTGTGCAGACGCGACGTGGGCACGCCGCCTGTCCATC
CACTGCGGGCTTATTGGCAGCGCACCATCCACACATGCCGCCCCGATGAC
GACGCGATCGGTTCATCATCGTTACTGAGTCCTAGGTGAATGTATCGGCC
TTTTTTTTTGGTCGACACTCGGCACGCTTGCCGACACTTTCTGTGCCAAA
CCCAGATCGTACGCTACCGAAACACCAACACCGCACTCTCGAAAAGCCCC
GACTTCGTTTCTCGTTCCCCCGTGCCCTGCCCCATCTCCTTGTTGCTCCT
CACACCGTGCCTCGCGACGGTACCAGTACAAGCGGTATACGTTCATGCAC
AATGGGGGCATTCCCGGGTTCGAAAAGATGAAGCGCCAGCTACTAGCTCT
GCTCGGGGACGAGGCCTACCAGACGATTGAGGGTACGACGGATTCCGAGG
TGAGCATCCAAGGTGGGTGGACGGCAAGGTGGAAGCCAGGGTGGAAGCCA
GGAAAGTAGGAAGAAGGAAGCAAACGATGACTGGAGATGGGAAGAGGCGA
TGTCGTCCGCCCGTGGCCCTGCAGCGGTGGTCGATGTACGCACCTTGGCG
TTGCAACGAACCCCGACACCTTAGAAGGTCACCGCTTGATTCGGCAATCG
ATGAAACTTTCCCCCGGGTAGCACGGCAATCATCCGCAGTGGAGCACTCG
CCCTCGAGAATTTCTACAGCACTAGTTGCGGCACCTGCCGAGCATAACAG
GCACGGATTAACAAGCCTTTCGGAAGAGAATATCAGTATCTTTTACTCAT
CCGCCTTCTGATAAAAGACAGGGGATGACCGCGGCGGAGACCTTTCCCTG
TTGTTGTTTCGTTGCGTTCGTCACGACAGGGATGAATCGGTTCGTTCCGC
CCTTCGTTCATGCAGCTTTTTCCATTTTACGTCAGGTGTGCTTCGCGTTC
TTTTTGGACGAGCTGCCCGACACGAACGACTATCTCAGCGCGTCTGAGAT
CGCTCAGGTGACCACGACCCCCCCCTCCCCCCCCTCGGCGCTACGGGCGA
AATAATGTATGATGAACCGGTCGCGTTAGACCAACGCGAGATTGTAAAAC
ATGTCCTCTCTTCTTTTCGCGACATCTGTTGGAGCGCTGGCGTTGCAAAC
AGTGCGGGTGGGTGGCGCCGGGAGGACGAAGGGAGGGTTTTTGCATACCG
TATACGGTACAAGATAACACACCCCCTCCCCTGGACAGATTTTCAAAGGT
CGATTTCTTAGCAACAAAGAGAATTATGATGCCCAAATTGGTGTCGTTGG
AGAGATTTAATCGATATCTTTCTGTGGTTTTATCGCAAGTCATTGGCACC
GTCCTTGATGCGGGGAAATGGCTTTGAGAATCGGTCCAGGGGGTGTGGTA
TCTTGTGTCGTATACGGTAATGTTATTCTCACTCTGGTGTGCTTCGGTCA
GCGGCGGTGCTGGTGCTGCGATGCCGCCGCTTGTGCTTGCAGGAAATGTT
CATGACTCCCGTTGTCCGGCCTGTCCTTCACTTGGTGTGCCCACCTTTCT
TGGTGGCACCCTGCGACATGGCGGCGTCCCGTCCCTGAAGTTCTCGATCG
ACATACTATGTAGATGGTTTTTCTTCCATACTCGCCGTGAGATCGCGCTC
CCTGTTCCCTGTGTGCCTCAGAAAGGCGTTGCTCCTATTTTTTGCACTGG
TTTCGTGAAGTCTTAACGGCTTCCCTAGTGCAGTCTACGATGCTCCGAAA
AATGCATCGACGCGCATCTCCTTTCCTCGGGAAACAAGAACTACCGAGTG
TACGTGTTGCCTTCACACTTTTCTTGCATTCCTACGAAGTCGGGATCGAG
GCCCGCCTTCATAACAGCTCTCCCCCGGCCCTCCACCTTCTCTTATCTCT
CTGGCTCTCTCTCTGTCTCTAACTCTCTCTGTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCT
GTCTGTCTCTGTCTGTCTCTGTCTGTCTCTGTCTGTCTCTGTCTGTCTCT
CTCTGTCTCTGTCTGTCTCTCTGTCTATCTCTCTCTCTCTCTCTCTCTCT
CTCTTCCCCCCCTCTCTCTCCCCCCTCTCTCTCTCCCTCTCTCTCACGCG
CGCGATCTCGCTCTCTCTCTTCCCCGTGCTGCCCCCCGCAAATGTACGCC
GTCCACCCTCTCGTCACAAACCAAGTCTAGGTCCTACGCAGTACAATCAC
ACGGATCGTATCGGCGGTAGCCCGATTCGCCGCTGATCAGCACTCCCGGG
CGTCGGCAAGAACAGCCAAGGCATCCTCGGTCCCAACTAGCTCAATCCAT
GGGGCTGCCACCTCTGGTGTTGTCAATGATGGTGGTGGCTACGCTGATCA
TAAACCGATGCCAGCAGCGGCAGCAACAGCCCCGGTAGGCGGGGAGAACG
TGGGTGCTGCTGCTCGTGATGCAGCCGCTGGTGCTGGCGGTCCCGGTGGC
GGTGGCTGTGGTGGAGGGGGCTCCGTCGGCCTCGGCGAGGGGATAGGCGC
CGGCGGCGCCGGCGGAGAAAGTGCTCAAGGCACAGCATCAGTTGCTGCTG
ATGATGTGGTCCCGGCGATGTCTCTGAATTTCTGCGTGACGGACGGGAGG
CATATTGTGTGCTCGCGGTACCGTAACCACCCTCGCCAAGACCCGCCGAG
TCTATTCGTTCTGTCGGGCGCGGGGTTCGTCTGCGAGAAGGAGGGGAGCT
GTTTGCGACTGATCGCCCCTGGTGAGCGTGTCCGCCCCGGAATCCTCTTA
TCCATGTCCACGTCTCTTGCCTTGCTTTGCCTTGCGTTGCTCGTCGTCGC
TTTGCTTCGTTTTGGCGTACTCCAGTATGTCTTCTTCGCGTTGGCTCTTA
CTTGCTCTGGTTTGGTTTGCCCTTTGCTGTGCTGTGCTGTGCTGTGCTGT
ACTCAGTGGTGCTTTGCTTTTGGTCTCCTCGGCTTCGTTCGGCTTCCGTT
TGCTCTGCACTGCGCCCCCACCTCCTCCTCTGTGTACTCCGTCTTGGGCC
CGACGGGATTTACGGCGACTGTGTTGACTTGCGCCCTTTCCGAGTTTGAG
CTGCTCAACGACGTTGACTTTGCATCGAGAGTCGTGCTCTTTACACAGCG
GGGTGGGAGGGACGTTCAGGGAGGACTCGTGGAATGTCCCCGAAGGCGAA
GGCCTTCACGACCTTTAACTCCCTGTGACCACGACGCCAAGATGTGGCGA
CCACCTTTGCTTGTGACTCAACGAGGACTTCTCCTCTGACTTGATTTGTG
CTTCGCCGTCACCAAAATGACCCGATATCATTCAAAGCTTCACGAACCAA
GTCCATCTGTTCTGAATCCCCTTCCCACGCCTGCCCTCCCCGTCTCACCC
CGCTGTCTACACCATATTTCCATCGCGCCTTTTCCTCCTCATACGCGCCG
TTTCATGCGCCCAATGTTTCACAACAACTTCAAGAACCCAGCACAAGTGT
GGTGATATCCTCGGAGCCGCTCTGCCGGTCCACGAAGAGCTGGCAGCTCG
TTCCGCGTAATAGCATG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:2649690..2663006-

>mRNA_P-fluviatile_contig11.1219.1 ID=mRNA_P-fluviatile_contig11.1219.1|Name=mRNA_P-fluviatile_contig11.1219.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3216bp|location=Sequence derived from alignment at P-fluviatile_contig11:2649690..2663006- (Porterinema fluviatile SAG_2381)
ATATGTGCCGGCTCCTTTGCTACATGGGGGCGGTTGTCCCGATGGACACA
CTTATCACGAAACCCGAGGTGCCGGCTCCTTTGCTACATGGGGGCGGTTG
TCCCGATGGACACACTTATCACGAAACCCGAGCACTCGTTGGTTTTTCAA
TCCAGGGACGCGTCGTTTCACCCCGGGTGCCCGGACAAGAGAAATATCCG
CGTCAACGGAGACGGGTTCGGGATAGCCTGCACTCGTTGGTTTTTCAATC
CAGGGACGCGTCGTTTCACCCCGGGTGCCCGGACAAGAGAAATATCCGCG
TCAACGGAGACGGGTTCGGGATAGCCTGGTACACTTCGAGGAGAATCGAG
GAAGGGGGATGCCTCGTCAAGTTCCCGACCCCGGCTTGGTCCACCCCGAA
CCTCCTCAACATCGCCAAGTTCGTGGAGTCCAGCCTGGTGTTCGCGCACG
TGCGGGCGGCGTCGGACGGAGCGGTCCTCGTCGGAAACGTGAACCACGAG
AATACGCACCCCTTCCAGGTACACTTCGAGGAGAATCGAGGAAGGGGGAT
GCCTCGTCAAGTTCCCGACCCCGGCTTGGTCCACCCCGAACCTCCTCAAC
ATCGCCAAGTTCGTGGAGTCCAGCCTGGTGTTCGCGCACGTGCGGGCGGC
GTCGGACGGAGCGGTCCTCGTCGGAAACGTGAACCACGAGAATACGCACC
CCTTCCAGTACAAGCGGTATACGTTCATGCACAATGGGGGCATTCCCGGG
TTCGAAAAGATGAAGCGCCAGCTACTAGCTCTGCTCGGGGACGAGGCCTA
CCAGACGATTGAGGGTACGACGGATTCCGAGTACAAGCGGTATACGTTCA
TGCACAATGGGGGCATTCCCGGGTTCGAAAAGATGAAGCGCCAGCTACTA
GCTCTGCTCGGGGACGAGGCCTACCAGACGATTGAGGGTACGACGGATTC
CGAGGTGTGCTTCGCGTTCTTTTTGGACGAGCTGCCCGACACGAACGACT
ATCTCAGCGCGTCTGAGATCGCTCAGGTGTGCTTCGCGTTCTTTTTGGAC
GAGCTGCCCGACACGAACGACTATCTCAGCGCGTCTGAGATCGCTCAGGT
CCTACGCAGTACAATCACACGGATCGTATCGGCGGTAGCCCGATTCGCCG
CTGATCAGCACTCCCGGGCGTCGGCAAGAACAGCCAAGGCATCCTCGGTC
CCAACTAGCTCAATCCATGGGGCTGCCACCTCTGGTGTTGTCAATGATGG
TGGTGGCTACGCTGATCATAAACCGATGCCAGCAGCGGCAGCAACAGCCC
CGGTAGGCGGGGAGAACGTGGGTGCTGCTGCTCGTGATGCAGCCGCTGGT
GCTGGCGGTCCCGGTGGCGGTGGCTGTGGTGGAGGGGGCTCCGTCGGCCT
CGGCGAGGGGATAGGCGCCGGCGGCGCCGGCGGAGAAAGTGCTCAAGGCA
CAGCATCAGTTGCTGCTGATGATGTGGTCCCGGCGATGTCTCTGAATTTC
TGCGTGACGGACGGGAGGCATATTGTGTGCTCGCGGTACCGTAACCACCC
TCGCCAAGACCCGCCGAGTCTATTCGTTCTGTCGGGCGCGGGGTTCGTCT
GCGAGAAGGAGGGGAGCTGTTTGCGACTGATCGCCCCTGGTGAGCGTGTC
CGCCCCGGAATCCTCTTATCCATGTCCACGTCTCTTGCCTTGCTTTGCCT
TGCGTTGCTCGTCGTCGCTTTGCTTCGTTTTGGCGTACTCCAGTATGTCT
TCTTCGCGTTGGCTCTTACTTGCTCTGGTTTGGTTTGCCCTTTGCTGTGC
TGTGCTGTGCTGTGCTGTACTCAGTGGTGCTTTGCTTTTGGTCTCCTCGG
CTTCGTTCGGCTTCCGTTTGCTCTGCACTGCGCCCCCACCTCCTCCTCTG
TGTACTCCGTCTTGGGCCCGACGGGATTTACGGCGACTGTGTTGACTTGC
GCCCTTTCCGAGTTTGAGCTGCTCAACGACGTTGACTTTGCATCGAGAGT
CGTGCTCTTTACACAGCGGGGTGGGAGGGACGTTCAGGGAGGACTCGTGG
AATGTCCCCGAAGGCGAAGGCCTTCACGACCTTTAACTCCCTGTGACCAC
GACGCCAAGATGTGGCGACCACCTTTGCTTGTGACTCAACGAGGACTTCT
CCTCTGAGTCCTACGCAGTACAATCACACGGATCGTATCGGCGGTAGCCC
GATTCGCCGCTGATCAGCACTCCCGGGCGTCGGCAAGAACAGCCAAGGCA
TCCTCGGTCCCAACTAGCTCAATCCATGGGGCTGCCACCTCTGGTGTTGT
CAATGATGGTGGTGGCTACGCTGATCATAAACCGATGCCAGCAGCGGCAG
CAACAGCCCCGGTAGGCGGGGAGAACGTGGGTGCTGCTGCTCGTGATGCA
GCCGCTGGTGCTGGCGGTCCCGGTGGCGGTGGCTGTGGTGGAGGGGGCTC
CGTCGGCCTCGGCGAGGGGATAGGCGCCGGCGGCGCCGGCGGAGAAAGTG
CTCAAGGCACAGCATCAGTTGCTGCTGATGATGTGGTCCCGGCGATGTCT
CTGAATTTCTGCGTGACGGACGGGAGGCATATTGTGTGCTCGCGGTACCG
TAACCACCCTCGCCAAGACCCGCCGAGTCTATTCGTTCTGTCGGGCGCGG
GGTTCGTCTGCGAGAAGGAGGGGAGCTGTTTGCGACTGATCGCCCCTGGT
GAGCGTGTCCGCCCCGGAATCCTCTTATCCATGTCCACGTCTCTTGCCTT
GCTTTGCCTTGCGTTGCTCGTCGTCGCTTTGCTTCGTTTTGGCGTACTCC
AGTATGTCTTCTTCGCGTTGGCTCTTACTTGCTCTGGTTTGGTTTGCCCT
TTGCTGTGCTGTGCTGTGCTGTGCTGTACTCAGTGGTGCTTTGCTTTTGG
TCTCCTCGGCTTCGTTCGGCTTCCGTTTGCTCTGCACTGCGCCCCCACCT
CCTCCTCTGTGTACTCCGTCTTGGGCCCGACGGGATTTACGGCGACTGTG
TTGACTTGCGCCCTTTCCGAGTTTGAGCTGCTCAACGACGTTGACTTTGC
ATCGAGAGTCGTGCTCTTTACACAGCGGGGTGGGAGGGACGTTCAGGGAG
GACTCGTGGAATGTCCCCGAAGGCGAAGGCCTTCACGACCTTTAACTCCC
TGTGACCACGACGCCAAGATGTGGCGACCACCTTTGCTTGTGACTCAACG
AGGACTTCTCCTCTGA
back to top