mRNA_P-fluviatile_contig11.1208.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1208.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE) HSP 1 Score: 772 bits (1993), Expect = 1.310e-259 Identity = 475/834 (56.95%), Postives = 552/834 (66.19%), Query Frame = 1
Query: 445 GDDSLPGDGREPLALAGIG--VGAALQGLNEALRNLRLPWARKDKTVEESEATDGEASSEKGVEQELAKVLVADVVVDESVIPRDVLASAAVKSGLLGREASAVRIKACATILNQWYQYEGHILSGVSNAVISPNGTISFNVNEPVVSAVEPVRLVYYKPANITDPLSKLVQVEKGKTRAGTIAKGLGLKGGEHFKVDAERWRGVLGSGLFNGAQLAGAHRNSIDKGFTLDINVEERSTIVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGLLGLNLRRSMASPFTSFSLRVGNNRFGQPGAWQVSVFRDSVAANGGRAPGAGGIGAXXGGGYADSTLGPAGSAPAFFTAPAGGVSRDLGMLARSIRGAQYGTAAAAADAATPANGDAATKKAVAAVGGTVVPIQEGTAVAGGLADGGPARCHGVSLSSSWPFSFVKATAGAGYQQVSPPTNLLKHGSRAXXXXXXXXXXXXXXVG--------------ATSGDKGTLDVFSLSGGLSRDWRLPGWLRRLGSWGGNVRLGSAGGVAEGSVSSFVDVKTGCLLEGGLAPRPFAQELATLVQRMPVGPQGKAGSWNVTLNVRQQVQHCSKDTPLHQVTPFGGQRTLRGFAEGELGRAKSFALGSAEVRVPLRSLLGKLPAQAVVFLDVGAFRPVTWSTPTAPAAGDYGRPRPRG------WDTARGPSGGGTEGDSVECRHSEMQEQLQYLQPGEEVSPPVENEIAKAAVAGDGEGPSASVLAXXXXXXXSADITPLEVLPAGEWRSSTPSPTPPPVAE--APGGFRVGRGQGVGLRIADLIQIDLGISRHGMKQLHIGLVDRNF 2874
GD+ GDG +PL LA G + A L + +A+R +++PW RKDK+ EE + E +SE+ E+EL+KVLVADVVVD S+IPRDVL SAAVKSGLLGREAS RI+ACA IL++WYQYEGHILSGV NA ISPNGT++F+VNEPVVS VEP++L YYK A+I DP S LVQVEKGKT+A TIAKGLGLKGGEHFK+DA+RWRGVLGSGLF+G QL+GAH+N+ DKG TLDINVEERS++VF PGVTKTLFDSNWAGEI FEE NVLGRNG++GL L RSM+SPFTSFSLR+GNNRFGQPG WQ+S FRD +A G A G XX GYA++ LGPA SAP F TA GV RDL MLARSI+GAQ+G G++ +K G + + HGVSLSSSWPF+ K TA AGYQQ+SPPTN+L+ S XXXXXXXXXXXXXX + D G +D+ +LSGG+SRDWRLPG LRRLG G + GSVSSF+DVKTGCLLEGG+APRPF+ E ATLV R+P+GP GK GSWN TLNVR QVQHCSKDTPL+QV PFGGQRT+RGFAEG LGRAK +A +AEVRVPLR+L G LP QAV+FLD+ AFR VTW A W+TARG GGG EGD XXXXXXX + P VA+ APGGFR RGQGVGLRIA+LIQ+D ISR GMKQLHIGLVD +F
Sbjct: 167 GDEGF-GDG-QPLVLAAAGGSLAAFLNEVKDAMRQVKMPWDRKDKSSEEGQEGVAETASEEDPEKELSKVLVADVVVDNSIIPRDVLTSAAVKSGLLGREASVERIQACARILSEWYQYEGHILSGVVNAAISPNGTVAFSVNEPVVSGVEPIQLSYYKTADIRDPNSGLVQVEKGKTKASTIAKGLGLKGGEHFKLDAQRWRGVLGSGLFSGVQLSGAHQNAEDKGMTLDINVEERSSVVFAPGVTKTLFDSNWAGEISFEETNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGG-----XXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVTEGVEEASGGGNSTSKG------------------QGAVXXXXXSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXETRRGSWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSGXXXXXXXXXXGSVSSFLDVKTGCLLEGGVAPRPFSHESATLVHRVPLGPHGKGGSWNATLNVRHQVQHCSKDTPLYQVPPFGGQRTVRGFAEGGLGRAKEYATSTAEVRVPLRNLFGTLPTQAVLFLDLAAFRSVTWPRGAAXXXXXXXXXXXXXXXXXXXWETARGAHGGGIEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--------------PRTVADMAAPGGFRAERGQGVGLRIAELIQVDFCISRGGMKQLHIGLVDGHF 961
BLAST of mRNA_P-fluviatile_contig11.1208.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI) HSP 1 Score: 662 bits (1708), Expect = 6.910e-220 Identity = 426/790 (53.92%), Postives = 491/790 (62.15%), Query Frame = 1
Query: 535 LRNLRLPWARKDKTVEESEATDGEASSEKGVEQELAKVLVADVVVDESVIPRDVLASAAVKSGLLGREASAVRIKACATILNQWYQYEGHILSGVSNAVISPNGTISFNVNEPVVSAVEPVRLVYYKPANITDPLSKLVQVEKGKTRAGTIAKGLGLKGGEHFKVDAERWRGVLGSGLFNGAQLAGAHRNSIDKGFTLDINVEERSTIVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGLLGLNLRRSMASPFTSFSLRVGNNRFGQPGAWQVSVFRDSVAANGGRAPGAGGIGAXXGGGYADSTLGPAGSAPAFFTAPAGGVSRDLGMLARSIRGAQYGTAAAAADAATPANGDAATKKAVAAVGGTVVPIQEGTAVAGGLADGGPARCHGVSLSSSWPFSFVKATAGAGYQQVSPPTNLL-KHGSRAXXXXXXXXXXXXXXVGATSG-------------------DKGTLDVFSLSGGLSRDWRLPGWLRRLGSWGGNVRLGSAGGVAEGSVSSFVDVKTGCLLEGGLAPRPFAQELATLVQRMPVGPQGKAGSWNVTLNVRQQVQHCSKDTPLHQVTPFGGQRTLRGFAEGELGRAKSFALGSAEVRVPLRSLLGKLPAQAVVFLDVGAFRPVTWSTPTAPAAGDYGRPRPRGWDTARGPSGGGTEGDSVECRHSEMQEQLQYLQPGEEVSPPVENEIAKAAVAGDGEGPSASVLAXXXXXXXSADITPLEVLPAGEWRSSTPSPTPPPVAEAPGGFRVGRGQGVGLRIADLIQIDLGISRHGMKQ 2844
+R ++PW RKDK+ E + E +SE+ E+EL+KVLVADVVVD S+IPRDVLASAAVKSGLLGREAS RI+ACA IL++WYQYEGHI SGV NA ISPNGT++F+VNEPVVS VEP++L YYK A+I DP S L QVEKGK + KGLGLKGG+HFK+DA+RWRGVLGSGLF+G QL+GAH+N+ DKG TLDINVEER+++VF PGVTKTLFDSNWAGEI FEEKNVLGRNG++GL L RSM+SPFTSFSLR+GNNRFGQPG WQ+S FRD +A G A G XX GYA++ LGPA SAP F TA GV RDL MLARSI+GAQ+G G++ +K AG + HGVSLSSSWPF+ K TA AGYQQ+SPPTN+L KH XXXXXXXXXXXXXX D G +D+ +LSGG+SRDWRLPG LRRLG G + A A GSVSS++DV+TGCLLEGG APRPF+ E ATLV R+PVGP GK GSWNVTLNVR QV RGFAEGELGRAK +A +AEVRVPLR+L G LP Q R R GW+T RG GGG EGDS E RH + +Q XXXXXXX S P A GGFR RGQGVGLRIA+LIQ+D ISR GMKQ
Sbjct: 1 MRQFKMPWDRKDKSSVEGQEGVAETASEEDPEKELSKVLVADVVVDNSIIPRDVLASAAVKSGLLGREASVERIQACARILSEWYQYEGHIFSGVVNAAISPNGTVAFSVNEPVVSGVEPIQLSYYKTADIRDPKSGLFQVEKGKIKVSPFPKGLGLKGGDHFKLDAQRWRGVLGSGLFSGVQLSGAHQNAEDKGMTLDINVEERNSVVFAPGVTKTLFDSNWAGEISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGG-----XXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVTEGVEEASGGGNSTSKG----------------HRAGAXXXXXLSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGAGPST---GAAAAAAGSVSSYLDVRTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQV---------------------RGFAEGELGRAKEYATSTAEVRVPLRNLFGTLPTQQ--------------------------RRRHHGWETVRGAHGGGIEGDSAEGRH--LGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPRTVADMAAS--GGFRAERGQGVGLRIAELIQVDFCISRGGMKQ 715
BLAST of mRNA_P-fluviatile_contig11.1208.1 vs. uniprot
Match: A0A835Z3Q2_9STRA (Omp85 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q2_9STRA) HSP 1 Score: 209 bits (533), Expect = 2.940e-52 Identity = 136/369 (36.86%), Postives = 209/369 (56.64%), Query Frame = 1
Query: 448 DDSLPGDGREPLALAGIGVGAALQGLNEALRNLRLPWARKDKTVEESEATDGEASSEKGVEQELAKVLVADVVVDES-VIPRDVLASAAVKSGLLGREASAVRIKACATILNQWYQYEGHILSGVSNAVISPNGTISFNVNEPVVSAVEPVRLVYYKPANITDPLSKLVQV--EKGKTRAGTIAKGLGLKGGEHFKVDAERWRGVLGSGLFNGAQLAGAHR--NSIDKGFTLDINVEERSTIVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGLLGLNLRRSMASPFTSFSLRVGNNRFGQPGAWQVSVFRDSVAANGGRAPGAGGIGAXXGGGYADSTLGPAGSAPAFFTAPAGGVSRDLGMLARSIR 1539
+D +PG A G+GV A + R+PW DK + E E+ + V+V DVVV+ + V+P++VL +A+V+SGLLG R+ AC I+N WY +G++LS V+ A + PNG + V EP+VS EP+ LV+ + N TDP S QV KGKTRA T+++ LGL+ G+ ++D +R+ + S LF+ L+GA + ++ T+ + V ER ++VFEPG+TKTLF++ WAGE+ FE++NV G N ++G+ RR + + TS+ +R+GN+RFG+ GAW ++FR+ + + P ++ TLG GVSRD+ ML RS+R
Sbjct: 84 EDGMPG------ASLGLGVAFASAFSWKEFSWPRMPW---DKPLPPPVPQHQEE------EETVPTVVVQDVVVNGTQVLPKEVLNTASVESGLLGAPFDQKRLAACIRIINGWYNSQGYVLSTVAEASVFPNGAVVLQVQEPIVSQKEPISLVFIQKVNATDPESAYEQVPNNKGKTRACTVSRALGLRKGKPLQIDLKRFNSLRASPLFDVVALSGAKKAPGEDEQSATVVLMVSERRSVVFEPGITKTLFNAQWAGEVAFEDRNVAGLNYVVGVEARRGVGASHTSYRVRLGNDRFGRLGAWSAALFREPTSDS---QPDH----------HSGQTLGQ-------------GVSRDVSMLYRSLR 411 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1208.1 >prot_P-fluviatile_contig11.1208.1 ID=prot_P-fluviatile_contig11.1208.1|Name=mRNA_P-fluviatile_contig11.1208.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=533bp MASPFTSFSLRVGNNRFGQPGAWQVSVFRDSVAANGGRAPGAGGIGAGGGback to top mRNA from alignment at P-fluviatile_contig11:2522834..2538776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1208.1 ID=mRNA_P-fluviatile_contig11.1208.1|Name=mRNA_P-fluviatile_contig11.1208.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15943bp|location=Sequence derived from alignment at P-fluviatile_contig11:2522834..2538776+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2522834..2538776+ >mRNA_P-fluviatile_contig11.1208.1 ID=mRNA_P-fluviatile_contig11.1208.1|Name=mRNA_P-fluviatile_contig11.1208.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3198bp|location=Sequence derived from alignment at P-fluviatile_contig11:2522834..2538776+ (Porterinema fluviatile SAG_2381)back to top |