mRNA_P-fluviatile_contig11.1200.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1200.1 vs. uniprot
Match: D8LKJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ3_ECTSI) HSP 1 Score: 387 bits (993), Expect = 8.920e-129 Identity = 250/397 (62.97%), Postives = 289/397 (72.80%), Query Frame = 1
Query: 40 PASINIGRHGSGGPPAPNTSERERRRRLTTSVERVADAVVEGLKEPPTPPRDIPSTAEIDALEQALVISIRTAGLKPGRENQLVDEATRLRRRRKTWLEEAEIIHREWVAHANLLWELHKQELLKVQDSQREREKQHARSLAGLKKRLEEERERVLTAVLSEREASVAQFRAAQEAQKEWAKARQEEMLATSTREIASRTTARLRRDAEQHARSIEETLEAEYRDQLAAASAQSEEAAASLSMAQKTAARLESTTRRLEAELAEATERNRRMERLSQAQTAAARELQEDLENRSRRLARRLDEEQVSCDREKETHAAEMLAVKEQWKEELRTVDDRVRAVVGVKDQARDFTSRIELLKQGLESARQRAETAEALLEELQRRICPPLASVAASH-HSP 1227
PA N R SGGPPA T R +R SVER A AVV GL+EPP+PPRDIP T ++DALEQALV+SIRTAGLKPGRENQLVDEATRLRRRRK WLEEAEI+ REWV HANLLWELHKQE+ K+ DSQRERE+QHARSLA LK+RLEEERER AV+ QEAQ+ WAKA ++E A + REIA RTTARLRRD+EQHA S++ETLEA Y D++AAA +SEE+AA LS AQK A RLE+TTRRLEA+LAEA ERNRRME LSQ Q AA +EL+EDLE R+RRLARRL+E++ S ++E+E HA+E+L VK Q IE L GL+S+RQRAETAEALLEELQR ICPP + SH HSP
Sbjct: 16 PAPRNRVRSSSGGPPAQGT--RSKRTSARASVERRATAVVNGLREPPSPPRDIPPTNDVDALEQALVVSIRTAGLKPGRENQLVDEATRLRRRRKAWLEEAEIVFREWVGHANLLWELHKQEVSKLSDSQRERERQHARSLANLKERLEEERERTRAAVVXXXXXXXXXXXXXQEAQELWAKAHRDESAAAAKREIA-RTTARLRRDSEQHASSVKETLEAAYADRMAAALEKSEESAALLSTAQKKAFRLEATTRRLEAQLAEAAERNRRMEHLSQTQNAAVKELKEDLEKRARRLARRLEEDKASHEKEREAHASELLTVKAQA---------------------------IERLTDGLKSSRQRAETAEALLEELQRGICPPFVPGSGSHRHSP 382 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1200.1 >prot_P-fluviatile_contig11.1200.1 ID=prot_P-fluviatile_contig11.1200.1|Name=mRNA_P-fluviatile_contig11.1200.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=421bp MSAAGRASGGRSVPASINIGRHGSGGPPAPNTSERERRRRLTTSVERVADback to top mRNA from alignment at P-fluviatile_contig11:2450880..2456697+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1200.1 ID=mRNA_P-fluviatile_contig11.1200.1|Name=mRNA_P-fluviatile_contig11.1200.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5818bp|location=Sequence derived from alignment at P-fluviatile_contig11:2450880..2456697+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2450880..2456697+ >mRNA_P-fluviatile_contig11.1200.1 ID=mRNA_P-fluviatile_contig11.1200.1|Name=mRNA_P-fluviatile_contig11.1200.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2526bp|location=Sequence derived from alignment at P-fluviatile_contig11:2450880..2456697+ (Porterinema fluviatile SAG_2381)back to top |