mRNA_P-fluviatile_contig11.1198.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1198.1 vs. uniprot
Match: A0A6H5JMY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY3_9PHAE) HSP 1 Score: 258 bits (659), Expect = 8.200e-68 Identity = 161/218 (73.85%), Postives = 180/218 (82.57%), Query Frame = 1
Query: 88 MGKSGRTLLVALLALLVSPDVLGFSLIPAGARHRSQQHQLAARGKRSIVVRPLSMQADPRFDSLVERVETASKAPKEAAASAAVPAFKSQAGADAPATIAEVQEQISTATTKVVAEQQPPSVTAAGSGQAFDGAVSVGSVGLQVFEGLAVVAAVPAILAAINKQQAAQQLKERNKMRAEELARGRQARADAKAAALAQAAIDRKKKQEGIAERIEAAR 741
MGKSGRTLLVALLALLVSPDVLGFSL PAGAR QQHQ A RGKR R L+M ADPRFDSLV+RVETA+KAP E+ VP FKSQ ADAPATIAEV+EQ++ +PPSV AAGSGQA+D AVSVGSVGLQV EGLAV+AAVPAIL A+NKQ+A Q+ KE+N+ RA+ELA+GRQARADAKAAALAQAAIDRK+KQEGIA+RIEAAR
Sbjct: 1 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRLSAARTLNMAADPRFDSLVDRVETAAKAPVES-----VPVFKSQE-ADAPATIAEVKEQVAPXXXXXXXXXRPPSVLAAGSGQAYDSAVSVGSVGLQVVEGLAVLAAVPAILTALNKQKATQERKEKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAAR 212
BLAST of mRNA_P-fluviatile_contig11.1198.1 vs. uniprot
Match: D8LKJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ5_ECTSI) HSP 1 Score: 234 bits (596), Expect = 3.870e-61 Identity = 195/274 (71.17%), Postives = 216/274 (78.83%), Query Frame = 1
Query: 88 MGKSGRTLLVALLALLVSPDVLGFSLIPAGARHRSQQHQLAARGKRSIVVRPLSMQADPRFDSLVERVETASKAPKEAAASAAVPAFKSQAGADAPATIAEVQEQISTATTKVVAEQQPPSVTAAGSGQAFDGAVSVGSVGLQVFEGLAVVAAVPAILAAINKQQAAQQLKERNKMRAEELARGRQARADAKAAALAQAAIDRKKKQEGIAERIEAARIEEEXXXXXXXXXXXXXXXXXXXXXXAAKXXXXXXXXXXXXXXARREASRLEREAK 909
MGKSGRTLLVALLALLVSPDVLGFSL PAGAR QQHQ A RGKRS R L+M ADPRFD LV+RVETA+KAP+E+ +P FKSQ ADAPATIAEV+EQ+ A+D AVSVGSVGLQV EGLAV+AAVPAIL A+NKQ+A Q+ K++N+ RA+ELA+GRQARADAKAAALAQAAIDRK+KQEGIA+RIEAAR XXXXXXXXXXXXXXXXXXXXX AA XXXXXXXXXXXXXX RREASR ERE +
Sbjct: 1 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAADPRFDGLVDRVETAAKAPRES-----IPVFKSQE-ADAPATIAEVKEQVXXXXXXXXXXXXXXXXXXXXXXXAYDSAVSVGSVGLQVAEGLAVLAAVPAILTALNKQKATQERKDKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAARXXXXXXXXXXXXXXXXXXXXXXXXXAAAXXXXXXXXXXXXXXXXRREASRKEREIR 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1198.1 >prot_P-fluviatile_contig11.1198.1 ID=prot_P-fluviatile_contig11.1198.1|Name=mRNA_P-fluviatile_contig11.1198.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1018bp MGKSGRTLLVALLALLVSPDVLGFSLIPAGARHRSQQHQLAARGKRSIVVback to top mRNA from alignment at P-fluviatile_contig11:2436424..2446304- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1198.1 ID=mRNA_P-fluviatile_contig11.1198.1|Name=mRNA_P-fluviatile_contig11.1198.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9881bp|location=Sequence derived from alignment at P-fluviatile_contig11:2436424..2446304- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2436424..2446304- >mRNA_P-fluviatile_contig11.1198.1 ID=mRNA_P-fluviatile_contig11.1198.1|Name=mRNA_P-fluviatile_contig11.1198.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6108bp|location=Sequence derived from alignment at P-fluviatile_contig11:2436424..2446304- (Porterinema fluviatile SAG_2381)back to top |