mRNA_P-fluviatile_contig11.1193.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1193.1
Unique NamemRNA_P-fluviatile_contig11.1193.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: D8LKJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ8_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.690e-129
Identity = 206/309 (66.67%), Postives = 223/309 (72.17%), Query Frame = 1
Query:  232 GDGLTAIALAQSLGLEFVPLAALHFLDAPDIARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXS-LTWAPAG-DRDGAMRKTSHASAPKPFNSRSHGGSNR-------GLPENFDL----GC---KSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQWEEVR 1110
            G G T ++LAQ LGLEFVPL+AL FLDA DI  CGAANRFL+KAA DEGVWRAARDRLWEGKVFVPESSRAMRAKEGYI SL DS RTWLH EELTSF WWFRFKQQAGEAWTAQDPWYRNEK  GC ++ +    R      P+LP             L W P G   +G ++   H SA     SR H  + R       G+ +N D     GC   K+ I WRFV RTGRRTGP GSFLRVSIGGREVPTYIVSRH SNWGFLLESCWTVYTSWEMPPR+GP CD SLLDD+LTVTMDDQWEE R
Sbjct:   20 GMGATVLSLAQGLGLEFVPLSALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLHAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEK--GCTSEPASSAGRG-----PTLPPRWGKTTGERWRVLPWRPCGAGAEGGLQARPHGSA-----SRRHVAAPREDESAFQGVEKNEDDDGGGGCFAAKANISWRFVGRTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEERR 316          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A6H5LH86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH86_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 1.400e-117
Identity = 186/291 (63.92%), Postives = 196/291 (67.35%), Query Frame = 1
Query:  232 GDGLTAIALAQSLGLEFVPLAALHFLDAPDIARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQWEE 1104
            G G T ++LAQ LGLEFVPL+AL FLDA DI  CGAANRFL+KAA DEGVWRAARDRLWEGKVFVPESSRAMRAKEGYI SL DS RTWL  EELTSF WWFRFKQQAGEAWT+QDPWYRNEK    + K    + R    S P                   PA +                                        I WRFVERTGRRTGP GSFLRVSIGGREVPTYIVSRH SNWGFLLESCWTVYTSWEMPPR+GP CD SLLDD+LTVTMDDQWEE
Sbjct:   23 GMGATVLSLAQGLGLEFVPLSALLFLDARDIEACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTSQDPWYRNEKAPKVDFKPDHTVLRHGDMSLP-------------------PAAN----------------------------------------INWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEE 254          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A7S0ZKW4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKW4_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 7.730e-40
Identity = 94/248 (37.90%), Postives = 130/248 (52.42%), Query Frame = 1
Query:  361 AATDEGVWRAARDRLWEGKVFVPESSRAMR-AKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAM--RKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQ 1095
            A+  E +WR  RD LW  KV+V +  R M+ A+E Y  SL D+ RTWL  EEL +F W FRFK  AGE WT  DPW+++       A +S     SVS  +P                  +P+   + A+  R+    +    F      G +  +     +      RWRFVE++  RT P+GSF+RV+    + P Y+VSRHA NW F++ESCW V  S+ MPP+   G DP L D+ L+VT+D Q
Sbjct:   52 ASRSESLWRELRDELWSSKVYVSQEIRDMQYAREAYKESLKDAKRTWLTKEELVAFEWSFRFKAAAGEHWTESDPWWQSP-----PAPVSAAEGESVSQQNPQ---------------GVSPSDLSEDAVEHRQNGRQAIVVRF------GEDGSVLGRGQMHSSQQFRWRFVEQSCGRTAPLGSFVRVN----QFPAYVVSRHAKNWAFIMESCWVVLCSFPMPPQ---GSDPLLEDENLSVTVDYQ 266          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A0M0J8D1_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8D1_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 8.020e-32
Identity = 92/285 (32.28%), Postives = 135/285 (47.37%), Query Frame = 1
Query:  277 EFVPLAALHFLDAPDIARCGAANRFLYKA-ATDEGVWRAARDRLWEGKVFVPESSRAMRA----KEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGL--PENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQWEEVR 1110
            + V L A H LD   + R    +R L    ++    W      LW+ KV+VP  +R +RA    +     S+ D+ RTWL  +EL +  W FRFK  AGE+WT +DP++        +   ++V     SA+   +                   G+ DGA                     +RG   P  F++    ++RW++ +  G   G   S L + + GR+VPTY VSRH SNWGFL++SCW +YTS+ MP R   G DPSL D+ L +T++ Q  E R
Sbjct:   17 DLVALIASH-LDLAGVGRLAGVDRTLRTIISSTNDAWEGHCSHLWDRKVYVPLRARKLRASGDARAALRLSIEDAERTWLTDDELCALEWNFRFKASAGESWTEEDPYWN-------DLPPTRVKFEMPSATGGEV------------------GGEADGA--------------------ESRGTMKPSGFEMLEHRSLRWQWAKGRGEDVGGDRSRLELYVDGRKVPTYHVSRH-SNWGFLMQSCWVLYTSFPMPVR---GTDPSLDDEALEITIERQSREAR 251          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A7S0MIA4_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MIA4_9CRYP)

HSP 1 Score: 127 bits (318), Expect = 9.150e-31
Identity = 85/266 (31.95%), Postives = 121/266 (45.49%), Query Frame = 1
Query:  322 IARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAM----RAKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQ-WEE 1104
            + RC    +F    +    +WR     LW  KVF+P+  + +    R++E +I SL DS RT +  EEL+S  ++FRFK+ AG  WT QDP+++ ++                                    +T+ P G   G                             F      A +WRFV+ +G+     GSF+RVS+  R VPTY+VSRH SNWGF+L++CW VY S+ MPP    G + SL D  L   MDD+ W E
Sbjct:   36 VVRCSRVCKFWNAVSRQNSLWRDLCISLWSDKVFIPDQFKPLNTSGRSREAFINSLMDSKRTAITSEELSSILFYFRFKEVAGSYWTDQDPFWQKQE---------------------------------PLRITFTPEGRLVG-----------------------------FPWDVLEA-KWRFVDNSGKTCQTRGSFIRVSVNDRSVPTYMVSRH-SNWGFILQNCWVVYFSFPMPPI---GAELSLDDRALDELMDDERWGE 234          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A7S4DSF9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DSF9_9EUKA)

HSP 1 Score: 122 bits (305), Expect = 6.670e-28
Identity = 79/274 (28.83%), Postives = 121/274 (44.16%), Query Frame = 1
Query:  295 ALHFLDAPDIARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAM---RAKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQWEEV 1107
            ++ FLD  D+  CG  NR  Y A+ +  +W    + LW  KV+VP+  R M     ++ Y+ SL D+ R +   +EL  F W FRFK+ AG  W   DP++  + K    + ++  + R   A                           DG++ +     A + F                    ++  +W   E T    G      R+ +     P+Y++SRH+ NWGFL++SCW ++TS+ MP    PG D  L D  L V +DDQ EEV
Sbjct:   19 SMSFLDVEDVLSCGMVNRRWYSASQENQIWGVLCEALWRDKVYVPKQIRGMANGNPRQAYVESLRDARRQYPTLDELLEFSWCFRFKKSAGPHWIQIDPYWTLDHKG---SSIASTIIRKFKA---------------------------DGSLERLDTHEAMRSF------------------AGEAKFKWAVRETTD---GDKRFVKRIQVN--HFPSYVISRHSRNWGFLMQSCWVLWTSFPMP---APGIDKFLDDGHLEVRVDDQIEEV 236          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A7S0DF25_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DF25_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 2.750e-26
Identity = 82/275 (29.82%), Postives = 121/275 (44.00%), Query Frame = 1
Query:  298 LHFLDAPDIARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMRAK---EGYITSLTDSMRTWLHP--EELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQWEEV 1107
            L FL   D+ RC    +     +    +W    D LW  K +VP   RAM+ +   + Y  SL DS R   HP  EEL  F W FRFK+ AG  W   DP++  + KD   +K+++ + R                              +DG +++  +  A + F+                 G     +WR  +  G      G +++  I     P+YI SRH  NWGF+++SCW ++TS+ MP    PG D  L+D +L V +DDQ EEV
Sbjct:   18 LSFLPLKDVLRCAQVCKQWLARSKSNAIWGGLCDELWRTKAYVPMYIRAMKLRNSNQAYFESLRDSKRQ--HPTLEELCEFEWCFRFKESAGAHWIQIDPYWSLDHKD---SKIAQTIIRRFM---------------------------KDGTLKRLDNFDALRNFS-----------------GSNYEFKWRTRDSEGE-----GKYIK-RIQVNHFPSYITSRHPRNWGFIMQSCWVLWTSFPMP---APGHDDLLVDQKLEVKVDDQMEEV 234          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A7S1BDU6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDU6_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.540e-23
Identity = 82/279 (29.39%), Postives = 129/279 (46.24%), Query Frame = 1
Query:  289 LAALHFLDAPDIARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMR--------AK--EGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVS-ASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERT--GRRTGPMGSFLRVSIGGREVPTYIVSRH-ASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVT 1083
            L  + FL    +      ++ ++   + + VW A   R+W+ KV VP  +  MR        AK  + +     DS R  +   EL S  W+FRFK  AG  WT+ DPW+      G   +L  + D  ++ ASS S+                    D D +     H    +  N  S+GG+ +   +  D   +  +RWRF+ R        P+G+++R+SI GR+VPTY V R   +NWGF +E+CW VY S+ +P R        LL+D++ ++
Sbjct:   56 LVLISFLPTRSVLELMMTDKDVFHRCSTDIVWDALCQRMWKDKVNVPGEALRMRDMIRIRGGAKMIDVFKMCYLDSKRQEVTKRELCSNPWYFRFKGSAGSLWTSSDPWWSG----GNARRLRFLPDGKIAPASSDSIVCEK----------------DNDASE----HLHKKRKLNDYSNGGNEK--EDCNDPFAEVKMRWRFITRPLDCYENRPVGAYIRISINGRDVPTYHVRRSPTNNWGFTMENCWGVYASFNLPKRGTE----KLLEDQVLIS 304          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A7S0E3L2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E3L2_9CRYP)

HSP 1 Score: 107 bits (266), Expect = 2.120e-22
Identity = 80/263 (30.42%), Postives = 118/263 (44.87%), Query Frame = 1
Query:  331 CGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMR---AKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSK-VLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQWEEV 1107
            C    +   +A   + VWRA  D +W+   + PE+   +R    K+ Y+ +  D  RT L  EEL  F W+FRFK+ AG  WT  DP++     +G  A+ S    D S++  S  +            +LTW                            G++R L       C            GR        +RVS+ GR+VPTY+VSRH  + GFL++SCW V +S+ +PP   P  DP + D+ L+VT++ Q  EV
Sbjct:   77 CALVCKGWMEALQSDDVWRALCDEIWKRSGYWPENLERLRDKNPKQAYLEACKDIDRTELTLEELCGFRWYFRFKKAAGSHWTDSDPYW-----NGMPARFSCFTADGSLTRMSSEV-TDEAEHNTYFPTLTW--------------------------RWGNSRSLQPASGSPC------------GR--------VRVSVEGRDVPTYVVSRHPKHRGFLMQSCWAVMSSFPLPP---PREDPDMEDEALSVTLECQQTEV 284          
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Match: A0A812PGR1_9DINO (Kif11-b protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PGR1_9DINO)

HSP 1 Score: 107 bits (268), Expect = 6.150e-22
Identity = 85/270 (31.48%), Postives = 113/270 (41.85%), Query Frame = 1
Query:  307 LDAPDIARCGAANRFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMR--AKEGYITSLTDSMRTWLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRSVSASSPSLPXXXXXXXXXXXSLTWAPAGDRDGAMRKTSHASAPKPFNSRSHGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSF----LRVSIGGREVPTYIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDE-LTVTMDDQ 1095
            L A +IA   A    L   A    VW      LW+G+  +   +   R  A+E Y  SL DS RT +   EL S  W FRFK  AGE W A DPW++ ++      K +    R+     P                     G R   +R          F +R+H   NR                     TGR +     F    +R  + GREVPTY V R+  NWG+ +ESCW V++SW MP +D P  +  LL+DE L V+ D Q
Sbjct:   20 LRAQEIAAVAATGSRLRSVAVSNPVWDGLCGALWQGRAVLHRFTELRRSDAREAYRQSLEDSRRTNITRGELLSIDWSFRFKASAGEGWQAGDPWWQGQEATRVRFKKN---GRAAFKRGPLF-------------------GSRPPVLRWRFVR-----FPARTHQALNR--------------------TTGRGSADFSEFGRRGIRAKVMGREVPTYCVRRNKHNWGWTMESCWVVWSSWPMPRKDSP--EAELLEDERLPVSFDVQ 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKJ8_ECTSI1.690e-12966.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LH86_9PHAE1.400e-11763.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0ZKW4_9RHOD7.730e-4037.90Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A0M0J8D1_9EUKA8.020e-3232.28Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S0MIA4_9CRYP9.150e-3131.95Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S4DSF9_9EUKA6.670e-2828.83Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S0DF25_9EUKA2.750e-2629.82Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S1BDU6_9STRA3.540e-2329.39Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0E3L2_9CRYP2.120e-2230.42Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A812PGR1_9DINO6.150e-2231.48Kif11-b protein n=1 Tax=Symbiodinium sp. CCMP2592 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2409392..2413764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score103.6
Seed ortholog evalue1.7e-19
Seed eggNOG ortholog2850.Phatr50194
EggNOG free text desc.A Receptor for Ubiquitination Targets
EggNOG OGs2CNXT@1,2QYMI@2759,2XGEQ@2836
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionF-box domain
Ec32 orthologEc-16_003220.1
Exons5
Model size1110
Cds size915
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1193.1prot_P-fluviatile_contig11.1193.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2409392..2413569 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815465.6968858-CDS-P-fluviatile_contig11:2409391..24095811622815465.6968858-CDS-P-fluviatile_contig11:2409391..2409581Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2409392..2409581 -
1693561924.8916597-CDS-P-fluviatile_contig11:2409391..24095811693561924.8916597-CDS-P-fluviatile_contig11:2409391..2409581Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2409392..2409581 -
1622815465.7122765-CDS-P-fluviatile_contig11:2409905..24099741622815465.7122765-CDS-P-fluviatile_contig11:2409905..2409974Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2409906..2409974 -
1693561924.900426-CDS-P-fluviatile_contig11:2409905..24099741693561924.900426-CDS-P-fluviatile_contig11:2409905..2409974Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2409906..2409974 -
1622815465.7274525-CDS-P-fluviatile_contig11:2411624..24117651622815465.7274525-CDS-P-fluviatile_contig11:2411624..2411765Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2411625..2411765 -
1693561924.9080248-CDS-P-fluviatile_contig11:2411624..24117651693561924.9080248-CDS-P-fluviatile_contig11:2411624..2411765Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2411625..2411765 -
1622815465.7396214-CDS-P-fluviatile_contig11:2413008..24131181622815465.7396214-CDS-P-fluviatile_contig11:2413008..2413118Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2413009..2413118 -
1693561924.9155927-CDS-P-fluviatile_contig11:2413008..24131181693561924.9155927-CDS-P-fluviatile_contig11:2413008..2413118Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2413009..2413118 -
1622815465.7496128-CDS-P-fluviatile_contig11:2413164..24135691622815465.7496128-CDS-P-fluviatile_contig11:2413164..2413569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2413165..2413569 -
1693561924.9280522-CDS-P-fluviatile_contig11:2413164..24135691693561924.9280522-CDS-P-fluviatile_contig11:2413164..2413569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2413165..2413569 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815465.761195-UTR-P-fluviatile_contig11:2413569..24137641622815465.761195-UTR-P-fluviatile_contig11:2413569..2413764Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2413570..2413764 -
1693561924.94174-UTR-P-fluviatile_contig11:2413569..24137641693561924.94174-UTR-P-fluviatile_contig11:2413569..2413764Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2413570..2413764 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1193.1

>prot_P-fluviatile_contig11.1193.1 ID=prot_P-fluviatile_contig11.1193.1|Name=mRNA_P-fluviatile_contig11.1193.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=305bp
MADPERREAIAAGDGLTAIALAQSLGLEFVPLAALHFLDAPDIARCGAAN
RFLYKAATDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYITSLTDSMRT
WLHPEELTSFCWWFRFKQQAGEAWTAQDPWYRNEKKDGCEAKLSKVLDRS
VSASSPSLPPSLPPSLSPSLSLTWAPAGDRDGAMRKTSHASAPKPFNSRS
HGGSNRGLPENFDLGCKSAIRWRFVERTGRRTGPMGSFLRVSIGGREVPT
YIVSRHASNWGFLLESCWTVYTSWEMPPRDGPGCDPSLLDDELTVTMDDQ
WEEVR
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mRNA from alignment at P-fluviatile_contig11:2409392..2413764-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1193.1 ID=mRNA_P-fluviatile_contig11.1193.1|Name=mRNA_P-fluviatile_contig11.1193.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4373bp|location=Sequence derived from alignment at P-fluviatile_contig11:2409392..2413764- (Porterinema fluviatile SAG_2381)
CCGCTTCGTCTGTGTTGTGTCCGCGAAAAAAAGTGATATTTGACTTTACC GAGGTCAACTAAAATATCAAAGATCCAATAAATGGAGCCAGCCGTGCTAG TTTTTGTTTTTTCGACACACACGCACGTATAGCGCTGTTGGACTACACCA AACGGACGTGTAAGTGACAACTTACCCCACACAAGTATTAAACGCATGGC GGATCCGGAGAGACGAGAGGCCATTGCAGCGGGCGATGGCCTTACAGCAA TCGCCCTAGCGCAGAGCCTCGGGCTAGAGTTCGTCCCCCTCGCCGCCCTG CACTTCCTTGACGCCCCCGACATCGCGCGTTGCGGCGCCGCGAACCGCTT CCTCTACAAGGCCGCGACCGACGAGGGCGTCTGGCGGGCGGCCCGGGATC GGCTTTGGGAGGGAAAGGTCTTCGTCCCGGAGAGCTCGCGCGCGATGCGC GCGAAGGAGGGCTACATCACCAGCCTGACGGACTCGATGCGGACCTGGCT CCATCCCGAGGAGCTCACCTCTTTCTGCTGGTGGTTTCGCTTCAAACAGC AGGCGGGGGAAGCGTGGACCGCGCAAGACCCCTGGTACCGCAACGAGAAG GTGAGGAGTGAACGGCCATAACGGGGAGAGAGGATCCCCAAGAGAGAAGG ATGGGTGTGAGGCGAAGTTGAGTAAAGTGTTGGACCGAAGTGTCTCCGCT TCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCTCT CTCGCTGTTGCCTCTCTTCTCTCTCGATGTTTTTATTCCGTGGCGCGTTT TGATTTTCCCCCCGCCTTAGGGCTTGATGAGCGAGTTGAGTGTTTGTCTC CTTTACATTGTTTTGGCCCACCTTCGTGTGCGTCCGCTGAAGACCGCAGA GGGGTGTTGTTTTCTGGGAGACGAATGAACATCTCACAGAGAGAGGGCCG GTGTGTGGAGTTTCTCAAGAATATTCCTTCTGCCACTTGTCGCAATTTTG TAATTTAGAGGGCACGCTCTCAACATCCACTTTTTATAGCTCTGTCTCGT TGAACTGTTTTGCATCGATCTTAAATGGCAAATATTCGTCCGCGCACCCC ATATGTGCTTGTAATGCTCTCCTCCGCCACCGTCTTGGCGTCGTGTCCCG AATTTCCACTAGCTCATGGTTTCAGAGCGTGAACACACTACCCTGCTTGC TGTCGGCGTAGATCGTTTTTGGGACTCTCCTCACCGCGCGGGCCCGCTCT CAGTGTGCTCGAACATTTTCTTCCCCCGCGCCGCCCGAAGATGTGCACAT GCTTTGGACTTCACACGCGCCGCGCGTGGTATTGTAGCGGTTGCGCATGT CTCCTGCGGAAACCTTCGAGTATGATTTCAGGTGCACGATGTGAAGGTAA TCCAAACCTCACAATGTTCGATTATGCGCAAAACGAACGAAAAAACAAAA AACAACGGTGTCTCAATACCCGGACTGAAACGCACGCACGCACGCACCAA TCTATCCGACATATGCCGTGAATAAGTGTGAGTCAACGAGCAACTTGCGT CATGCGCACGCGCCTCATTCGTGCTGACAGGAAGGGCTGCGACAACTGGC TGCGAAATCCGAAAGCAACCTACAACCAATTTTTGTGATCATTTCCAGAA GCGCACCTCTCTCGGTGATTTCGCGTTATAGAGATGTCTTGTGGCAGTGC GGCGCAGGCACACACACGTTCCATTCTGACAAGTCTGGTTTCGGCGGCGC GAAGGGCCCAACCCTCCCTCCGAACTAACAAAAGCAGGCAACAAACAACC GATGTCGAACGTTGTCGGGGGAAAGGGGGCTTGAACGGATTTTGCTTCCA TCGCTTGGGCCGTCGCTGAACTGCGATCGGGTTCTATGTTAACGCATCTG GGCCTCGAGTGCGATTCGAACGTGCTTCGCCGTCGTGTGAAAGAAAAAAA GGTGGCGGCTGTGAAGGGGTAACTATCGTCTCGGATTTCTTCAAACCAGG ACGTGGGCCCCCGCCGGGGACAGGGATGGTGCGATGCGCAAGACATCCCA TGCGTCTGCACCGAAGCCGTTCAATTCGCGATCGCACGGCGGTAGTAACC GCGGGCTACCAGAAAACTTCGACCTCGGATGCAAGTCAGCGTCGGCGACG AACTCCGCCTTCCTTGTTTGCAAAAGTGCAGGCGTGCGTGCTGCAACATG CAGTCAAACATGTGTCCTCCAAAATACTTAACTCTGTTTTACTCGGAATC ATATGTCCAATGCCCACCCATTGCACGTGGTACATACGTCGACACTACGA AATTCGCCGATGCGCACCATAGCCCGTGGCATTCGCGTGCTCTTGCTGCT TGCGAATCTGCCGAGTATATGATGGTTGATAGGAGAGCAAGACCCAGGAC ACGGAAAATACCTTACTATTTCGCCGCCTGTGCCCGTGTATCGCCGCCAG ATATGGTACGTACTCTATTATTGGCCTCATCATATGTATAAGGTGTAAGG CGTGGGGTGCCACTCCTTTGGCTTCAACTGCTGTGTCCTCGTGAAAAAGA CGAGGCTGGTGTATGGTGACTGTTGATGGTGCACGACATTACGATGTCTG ACATGAACCCAACCGAACGGCGATCGTATCTGATTTATTCGCCCGGAAAA TACGGGACACCAGCGAACCAGTACCCGAGGTGCCCTGATCTCACTTCTTG CCGTCTAGTTGGTGAATCTCCGCCCCGAGATGTAAATGCCCGCGCGGGTG AAAGAAGGTCGATTTTGCGCTGGGGGTGAGCAATACGTAACAACAAAAAC GGCGCTCGCACACCCCGTCGCATCACCGAATTTCTTCCCGGCAAAGCTGC CGGCTCAGTTCGGGTGCTTTCGACAGATATTTTTGATTTTTTGTTTGTGT TATTCTTGCTTGCCCCGTCCTCTTTGTCCCCGTCTTGAAAACTCTCCTTG AACCTCACACGTTGCGCCACCCCCTCTCACCCACCCTGTCTCCCTTTCTC TCTCACCGTTACCCTATCGCTTGCCATGTCCGTTGGGCGTGTCGGTGTGC CTGTGCCGCAGGCTCCTACGGTGGACTTTAAGGTCGACCACACCGTCCTG CGCCACGGCGACATGTCTCTCCCTCCCGCGGTACGTGCTTTTGCACATTT TTAACATGACTGACTGCCTACGTTTCAACAATTCTCACGAAATGGGCTTC ACTGCGCGCTATGGCTTCAATGCTTGTCTTGGATGGGGGCGTGACGGGTG GAAGAACCGTCGCTTTATTAGCGAGCGGGCTCTGTCTAGAAGTATCTACC GGGTAGAAACCTCAGTTTGGTTCAGACATGACGTGCTGCTTCGTCTGGCT TTAGGTGTCGAGGAAATTTTTGCGACGTCGGTGACGCTTGCCCTAACAGA TTCAGCTCCATCTGTATGTCTCTTACGTCTAATTCTCTCCATAGAGTTGA TCGTTCGCACGCGCACCAGGTGGCGGTCGCTTCACGGAAACAAGGCACAA GATAGCAAACACAACGCGCTCATGCCACGGAGAATGTGCCCTTGAAATTT TCGAACGACTTCGAGCAAGGCTTTCCTTAGGATTTATTCCAGGTGTAAGG TCGTCGAGCTCCTGGTATGCAGATATGCGTGTGGGAATTGGCCCCGCCTG CACGCACGTTTCTGATTGGGTGACACCTCCCTCCTCCCCTCCCTCCCTTC CTCGTCTTGACCACCACGACCACCACAACCGCTCCCTGCGTGCACGTGTC TTCGTCTCGATACTTGCCAATCCTGTTCCGTATAGGCTAGCATCCGGTGG CGCTTTGTGGAACGGACTGGAAGGAGAACCGGGCCCATGGGATCCTTCCT GCGCGTCAGGTGTGATTGGTGTTGAGCGCCGAGAGGCAAAGAGGTAGAGA GAGTGGGGGGAGGGGAGGCACACCGCCCTTATTGATTCATTCGTGTTTGC ATTTTCGAGTGATGTGTAAAAGCCAGAAAGTGTTTCTCCCGAAGATGATG TTTTCGTTTCGACGGAAGAACAAGCCGCCGCTACCTCTCATCTTTTCATC TCATTCACGGAGAGTGCTCTCCTGCGCCCTCCTTCCCCCGACCTCGACGT GCCCCGCACAACCCCGCTTTCACCTCACGGGTCTTCCACACTCGGCAATC CCGATTACACACATGCCGTGCCGTCGACACCAGCATCGGAGGAAGAGAAG TGCCGACGTACATCGTGTCTCGTCACGCATCGAACTGGGGCTTCCTGCTG GAGAGCTGCTGGACCGTCTACACGAGCTGGGAAATGCCCCCGCGGGACGG ACCCGGCTGCGATCCGTCGCTGCTGGACGACGAGCTCACGGTCACCATGG ACGACCAGTGGGAAGAGGTGCGT
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:2409392..2413764-

>mRNA_P-fluviatile_contig11.1193.1 ID=mRNA_P-fluviatile_contig11.1193.1|Name=mRNA_P-fluviatile_contig11.1193.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1830bp|location=Sequence derived from alignment at P-fluviatile_contig11:2409392..2413764- (Porterinema fluviatile SAG_2381)
ATGGCGGATCCGGAGAGACGAGAGGCCATTGCAGCGGGCGATGGCCTTAC
AGCAATCGCCCTAGCGCAGAGCCTCGGGCTAGAGTTCGTCCCCCTCGCCG
CCCTGCACTTCCTTGACGCCCCCGACATCGCGCGTTGCGGCGCCGCGAAC
CGCTTCCTCTACAAGGCCGCGACCGACGAGGGCGTCTGGCGGGCGGCCCG
GGATCGGCTTTGGGAGGGAAAGGTCTTCGTCCCGGAGAGCTCGCGCGCGA
TGCGCGCGAAGGAGGGCTACATCACCAGCCTGACGGACTCGATGCGGACC
TGGCTCCATCCCGAGGAGCTCACCTCTTTCTGCTGGTGGTTTCGCTTCAA
ACAGCAGGCGGGGGAAGCGTGGACCGCGCAAGACCCCTGGTACCGCAACG
AGAAGATGGCGGATCCGGAGAGACGAGAGGCCATTGCAGCGGGCGATGGC
CTTACAGCAATCGCCCTAGCGCAGAGCCTCGGGCTAGAGTTCGTCCCCCT
CGCCGCCCTGCACTTCCTTGACGCCCCCGACATCGCGCGTTGCGGCGCCG
CGAACCGCTTCCTCTACAAGGCCGCGACCGACGAGGGCGTCTGGCGGGCG
GCCCGGGATCGGCTTTGGGAGGGAAAGGTCTTCGTCCCGGAGAGCTCGCG
CGCGATGCGCGCGAAGGAGGGCTACATCACCAGCCTGACGGACTCGATGC
GGACCTGGCTCCATCCCGAGGAGCTCACCTCTTTCTGCTGGTGGTTTCGC
TTCAAACAGCAGGCGGGGGAAGCGTGGACCGCGCAAGACCCCTGGTACCG
CAACGAGAAGAAGGATGGGTGTGAGGCGAAGTTGAGTAAAGTGTTGGACC
GAAGTGTCTCCGCTTCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCTCTCCCTCTCTCTCGCTAAGGATGGGTGTGAGGCGAAGTTGAGTAAA
GTGTTGGACCGAAGTGTCTCCGCTTCCTCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCTCTCCCTCTCTCTCGCTGACGTGGGCCCCCGCCGGGG
ACAGGGATGGTGCGATGCGCAAGACATCCCATGCGTCTGCACCGAAGCCG
TTCAATTCGCGATCGCACGGCGGTAGTAACCGCGGGCTACCAGAAAACTT
CGACCTCGGATGCAAGTCAGCGACGTGGGCCCCCGCCGGGGACAGGGATG
GTGCGATGCGCAAGACATCCCATGCGTCTGCACCGAAGCCGTTCAATTCG
CGATCGCACGGCGGTAGTAACCGCGGGCTACCAGAAAACTTCGACCTCGG
ATGCAAGTCAGCCATCCGGTGGCGCTTTGTGGAACGGACTGGAAGGAGAA
CCGGGCCCATGGGATCCTTCCTGCGCGTCAGCATCCGGTGGCGCTTTGTG
GAACGGACTGGAAGGAGAACCGGGCCCATGGGATCCTTCCTGCGCGTCAG
CATCGGAGGAAGAGAAGTGCCGACGTACATCGTGTCTCGTCACGCATCGA
ACTGGGGCTTCCTGCTGGAGAGCTGCTGGACCGTCTACACGAGCTGGGAA
ATGCCCCCGCGGGACGGACCCGGCTGCGATCCGTCGCTGCTGGACGACGA
GCTCACGGTCACCATGGACGACCAGTGGGAAGAGGTGCGTCATCGGAGGA
AGAGAAGTGCCGACGTACATCGTGTCTCGTCACGCATCGAACTGGGGCTT
CCTGCTGGAGAGCTGCTGGACCGTCTACACGAGCTGGGAAATGCCCCCGC
GGGACGGACCCGGCTGCGATCCGTCGCTGCTGGACGACGAGCTCACGGTC
ACCATGGACGACCAGTGGGAAGAGGTGCGT
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