mRNA_P-fluviatile_contig11.1098.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: D7FM81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM81_ECTSI) HSP 1 Score: 293 bits (751), Expect = 2.090e-92 Identity = 153/182 (84.07%), Postives = 164/182 (90.11%), Query Frame = 1
Query: 49 MVDVYSLDSKEQQRVAKALRIALGEDVDVSSPPTLLRSELKGIKLRQVA-GGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALGGSMEPLSVPESVLEHAMGRK----TSFCNIL 579
MVDVYSLDSKEQQRVAKALR ALGEDV+VSSPP LLRSELKGIKLR+ GGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSAT+LANETLVTALAYSGGQQGLLSIH+QKRF+TW+K PSEAQV+C R L G+ EP SVPESVLEH+ GR+ +SFCNIL
Sbjct: 1 MVDVYSLDSKEQQRVAKALRQALGEDVEVSSPPPLLRSELKGIKLREDGRDGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATSLANETLVTALAYSGGQQGLLSIHIQKRFLTWNKAPSEAQVKCFRPPLDGTREPFSVPESVLEHSEGRQGGRASSFCNIL 182
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A836C8Z1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z1_9STRA) HSP 1 Score: 149 bits (375), Expect = 7.550e-38 Identity = 80/174 (45.98%), Postives = 116/174 (66.67%), Query Frame = 1
Query: 58 VYSLDSKEQQRVAKALRIALGEDVDVSSPPTLLRSELKGIKLRQVAGGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALGGSMEPLSVPESVLEHAMGRKTSFCNIL 579
V D +E+++ +AL E V P L SELKGIKLR L LL H++EGRVLLTD+DG+YNDF++EA ++ GGN+ +A++ V T+ LA+E +V ALAYSGGQ+ +LSIH QKRF+TW+K P+ ++ + +AL G++ L+VP+SV ++ + FC IL
Sbjct: 14 VCGTDPRERKKTRRALAARFREQAVVGEQP-LTVSELKGIKLRGPKTD--LALLVHFSEGRVLLTDKDGLYNDFLLEAVKLAGGNLLIAVSGVETAPGTLAHEGVVQALAYSGGQRAVLSIHQQKRFLTWAKEPAPVHLDHIAAALAGNVRLLAVPDSVNMYSSALRRRFCQIL 184
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A7S2XXL6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXL6_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.580e-32 Identity = 74/179 (41.34%), Postives = 113/179 (63.13%), Query Frame = 1
Query: 52 VDVYSLDSKEQQRVAKALR-IALGEDVDVSSPPTLLRSELKGIKLRQVAGGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALGGSMEPLSVPESVLEHAMGRKTS--FCNIL 579
VD+YSLD +E+ +++ + IA GE V + L R+ LK + L G +I+LCHYNEGR+LLTD+DG+YN+FI EA + TGGNVF+ + +S+S LA++ +V++L S GQ + I +R +TW PS Q+E L+ A+ G ++PL PE++L H +K +C +L
Sbjct: 6 VDIYSLDRRERYVLSETMNGIACGEKKLVLNSNPLSRTMLKDMVL---CSGPDMIILCHYNEGRLLLTDQDGLYNNFIKEAVKATGGNVFLVVTGLSSSGGVLADKRVVSSLV-SNGQSSIQYIDSARRLLTWDGAPSRDQLEHLQLAVRGKVDPLETPETILRHCFAKKVKAFYCVLL 180
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A7R9UAW8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAW8_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.280e-29 Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 52 VDVYSLDSKEQQRVAKALRIALGEDVDVSSPPTLLRSELKGIKLRQVAGGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALGGSMEPLSVPESVLEH---AMGRKTSFCNIL 579
V VY+L E++++ K + T + +LK +K L++LCHYNEGRVL+TD DGMYNDF++ A + GGNV + ++ V TS LAN + V +L + G Q + IH Q+R +TW+ PS E + A+ G +EPL +P SVLEH A +K C IL
Sbjct: 4 VHVYALLGSERRQLVKHVEQVCKTAGVKQVAVTPKKLQLKELKSDAFGLDASLVILCHYNEGRVLITDRDGMYNDFLVVASKNAGGNVLLVVSGVDTSDGELANTSFVDSLVWEGAQNAVGEIHTQRRLLTWNGSPSSFHKEHILKAVQGQLEPLQLPHSVLEHSSLAQPKKGFLCAIL 182
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A7S1XMY7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMY7_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.980e-28 Identity = 75/186 (40.32%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 52 VDVYSLDSKEQQRVAKALR-----IALGEDVDVSSPPTLLRSELKGIKLRQVAGGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALGGSMEPLSVPESVLEHAM---GRKTS--FCNIL 579
V+VY++ E++ + KA+ LG DV V LL+ +G+ +V L++LCHYNEGRVLLTD DGMYNDF++ A R GGN+ + ++ V T +LAN V +L + G Q + ++ Q R +TW PS A E + AL G + PL +PESV+E+A G K CNIL
Sbjct: 114 VEVYAVLGSERRALVKAVEKVCKSAGLG-DVQVLPEKLLLKDLKEGV---EVGADASLVILCHYNEGRVLLTDRDGMYNDFLVVAHRNCGGNILLVISGVETEGDSLANTAFVDSLVWEGAQNAMGELNTQGRLLTWKGTPSSAHKEQILKALQGQLSPLELPESVIEYANVTNGDKGGGFICNIL 295
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A7S2SN66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN66_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.240e-23 Identity = 66/174 (37.93%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 49 MVDVYSLDSKEQQRVAKALRIALGEDVDVSSPPTLLRSELKGIKLRQVAGGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALG--GSMEPLSVPESVLEHAMGRKTS 564
++ VY+LD +E + VA+AL + G V P L+ E++ + + I+LCH+ EGR LLTD DG+YN F+ +A + GNVF+AL +ST LAN +V L + GGQ + SIH +RF+T+ P+E Q++ + S+L + PLSVP + HA +S
Sbjct: 11 LLAVYTLDPEEHRGVAEALERSTGCGAVVR--PLRLK-EVRHFRFPRDTDTPDAIILCHFAEGRTLLTDTDGLYNAFLSQAVPMVHGNVFLALTNISTPPEVLANSEVVAELVHQGGQGSIGSIHSARRFLTFQDEPAELQLQHIASSLAHEAPVAPLSVPSGIETHAASTASS 181
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A7S3JRP1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRP1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.290e-19 Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 208 LILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECLRSALGGSME--PLSVPESVLEHA 546
+ILLCHY +GR LLTD DG+YN F++EA TGG VFVAL V LA L+ L + G Q + +H QKRF TW PS+AQV + SA E PL +P S+ EHA
Sbjct: 52 VILLCHYFDGRTLLTDNDGLYNTFLVEAVAATGGYVFVALTGVPAD-DRLARLDLINQLTHDG-QTSISELHRQKRFFTWDSFPSKAQVNIIVSAAKDEKEQCPLQLPISIKEHA 164
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Match: A0A0G4EHK5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHK5_VITBC) HSP 1 Score: 66.6 bits (161), Expect = 3.800e-9 Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 154 LRSELKGIKLRQVAGGGRLILLCHYNEGRVLLTDEDGMYNDFIMEACRVTGGNVFVALAPVSTSATALANETLVTALAYSGGQQGLLSIHMQKRFMTWSKGPSEAQVECL 483
++++L+G L + ++++ H NEGR+LLTD +G+YND + T NV + + V TS L + LV LA+ Q + ++ R +T+ + PS+ Q + L
Sbjct: 1 MKAQLRGFLLAERKTAVDMVVIVHRNEGRLLLTDRNGLYNDVLQACWHATNANVVIIVTKVPTSPDTLNDSALVATLAHHADQPTIGALSAAGRLITYDQTPSQRQADYL 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1098.1 >prot_P-fluviatile_contig11.1098.1 ID=prot_P-fluviatile_contig11.1098.1|Name=mRNA_P-fluviatile_contig11.1098.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=178bp MVDVYSLDSKEQQRVAKALRIALGEDVDVSSPPTLLRSELKGIKLRQVAGback to top mRNA from alignment at P-fluviatile_contig11:1259922..1264464+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1098.1 ID=mRNA_P-fluviatile_contig11.1098.1|Name=mRNA_P-fluviatile_contig11.1098.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4543bp|location=Sequence derived from alignment at P-fluviatile_contig11:1259922..1264464+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:1259922..1264464+ >mRNA_P-fluviatile_contig11.1098.1 ID=mRNA_P-fluviatile_contig11.1098.1|Name=mRNA_P-fluviatile_contig11.1098.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1068bp|location=Sequence derived from alignment at P-fluviatile_contig11:1259922..1264464+ (Porterinema fluviatile SAG_2381)back to top |