mRNA_P-fluviatile_contig11.1036.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1036.1 vs. uniprot
Match: A0A6H5JK77_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK77_9PHAE) HSP 1 Score: 543 bits (1398), Expect = 1.300e-170 Identity = 454/1090 (41.65%), Postives = 536/1090 (49.17%), Query Frame = 2
Query: 251 SVSRSFSLLRASGARAMLPVKKALGGDPEVVEARECLTKYKAKLALAIADAEATVATRRDERELLTKALASQENDLRCWGYLSVLPFFREHRRQETSRAQLRVTMAERREKVISEKHQEVIQLLRSLPIIGPWTNKQQLPLGITAESGGDGEGGRPGGNNPFISGGHDRFLENAFSVAPADLLAFDEDLASMRQRLVSCDRACAAAADAFAMKVVDAGGLGPRSFEDRVQMLLSLLSRYHVLEKFADEILGSEEMRQ---------------PAAVGATSVPK------AEVTEEVSGRGVTGNGDDE---------------------DAEAAVDTARGGGSACASGREEEGTAELGH--------------------------------------DDGRSLVR---PASFRFGFSTRSREECEEAFLELMLDERNREGRLLRRFLTMAQAKTSPP---------------------SSSSSAKAESLRSLSTGHSSSGAAYAAEVRRPAPRKAAAGSRPNASDAAATGGGAFSWIRRRPRGSGYPTSASNTGAAEVGNNPDACGAGIGAAGTKWGTTADAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSPQVVKAFINYFSQEYLVKIFDVPDILVPSLTELVTLLVFRQARRLVFGYDRRRVMASDRAWRDKATKLRSVCLLELGAPPEYVPVTKTNA-SNVGDTV--------EAAAMAVTAPVAED---AEAREPDD-------------------AAASPKSASTTDEASGAKINPDTTHPAIAVNLPRETGATPPAAPASCGADGRGGSGGGLAHTPALSKGAAAAPTAGDEMDKLD-VGYTVPPTAHRIEE--------CPAYGRASREFGRLGECLTPAKMLAVVKAGMMHLSEDSARISGSGKPLDADTLIPLLVHALVHADLPRVHEALNLLRNFRGPSWGGEAAYYVTCIEAAVSFTLDWRPAGTQTDLPLAPDDGAPAENVDNDSGSKVATTKTSQARRSGGSDXGDAAVAARWAAERASEEE-----------EKGREALMRLGIFLEKHEVQEDTVDVLASAGWL 3055
SVSRSFSLLRASGARAMLPVK AL GDPE VEARE LTKYKA L+ A+A+AEAT +RR++ LLT ALA QE+DLRCWGY+SVL F+EHRR+ET+RAQLRV M+ERRE+V++ K QEV +LLRS+PIIGPWTNK G ES G G G GG R E A +VAP DLLAFDE+LA RQRLV+CDRACAAAADAFAMKVV AGGL PRS EDR Q LLSLLSRYHVLE + G E+ Q P G T V + + + G G T N + E D VD ++G ++E D+ R V P + FS R++CE AF ELMLDERNREGRLLRRFLTMAQA SP S S A ++ + ++ GS A D T GGA + R P G T+AS T +G G G + + V PQVVKAFINYFS+EYLVK+FDVPD LVP+LT LV LLVFRQARRLVFGYDRRRV +D W++KA ++R V L ELGAP EY+ + + S V D E AV A + + A++R DD A SPKSA+ EAS A+ + + + ATP A G GG G A + + V T A + E+ PAY RASREF RLGEC TP +ML V+KAGM LSE++ARISGS KPLDAD+L+PLLVH+L HA+LPRVHEAL+ LRNF+G WGGE YYVTC+EAAVSF LDW G D DDG X +KGREAL+RLGIFLEKHEVQEDTVDVL+SAGWL
Sbjct: 107 SVSRSFSLLRASGARAMLPVKMALSGDPEAVEARESLTKYKATLSAAVAEAEATTTSRREDLVLLTTALAGQESDLRCWGYVSVLASFKEHRRRETNRAQLRVGMSERREEVVTAKLQEVSRLLRSMPIIGPWTNKS---AGAETESLGFGGG----------IGGDGRLWEEACAVAPEDLLAFDEELALARQRLVACDRACAAAADAFAMKVVAAGGLEPRSPEDRAQALLSLLSRYHVLELGESVVSGEEKTGQDQPTVKKDHPTVKSSPQDPGGTQVEEDREEAGKQQPRKEEGGGETRNLETEPVPVENTGRPIERKKTVEEEADQGRRVDEQTNASGTMSTGAQDEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPPRAESDESRRSVDGWGPPAGSARFSRLGRKDCEVAFFELMLDERNREGRLLRRFLTMAQANKSPXXXXXXXXXXXXXXXXXXXVPWSFSGDATGTGGKTTTLANTXXXXXXXXXXXXXXXXXXXGGSSVEAGDDK-TRGGAANTAGREP---GSATAASAT---------------VGKTGAITGDSEEG----------------------------------EGPVGPQVVKAFINYFSKEYLVKMFDVPDFLVPTLTTLVALLVFRQARRLVFGYDRRRVAKNDEVWQEKARRVRLVPLSELGAPQEYIIASSPRSGSAVQDGARRGPRTEKEGEVEAVDADLTDRKVVADSRSDDDGGPGDSGEPDGAGTDARLAAGLSPKSAAAAVEASHARTADVCANAGDDTAVAGQEQATPAAPSTDKGVSPTGGEHGDAALADTSTAXXXXXXXXXXXXXPVSGVPQTAAGRARQAEKEVAAXXXXAPAYARASREFERLGECATPVEMLDVIKAGMTLLSEEAARISGSDKPLDADSLLPLLVHSLAHANLPRVHEALSFLRNFQGAGWGGEQEYYVTCLEAAVSFVLDW---GAVADPNADGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKGREALVRLGIFLEKHEVQEDTVDVLSSAGWL 1127
BLAST of mRNA_P-fluviatile_contig11.1036.1 vs. uniprot
Match: D7FS45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS45_ECTSI) HSP 1 Score: 355 bits (910), Expect = 2.670e-104 Identity = 307/762 (40.29%), Postives = 356/762 (46.72%), Query Frame = 2
Query: 128 DPDGTEDTTFAEKSPQHATHVSRRGESGVRAGDTG-GLSAAQSVSRSFSLLRASGARAMLPVKKALGGDPEVVEARECLTKYKAKLALAIADAEATVATRRDERELLTKALASQENDLRCWGYLSVLPFFREHRRQETSRAQLRVTMAERREKVISEKHQEVIQLLRSLPIIGPWTNKQQLPLGITAESGGDGEGGRPGGNNPFISGGHDRFLENAFSVAPADLLAFDEDLASMRQRLVSCDRACAAAADAFAMKVVDAGGLGPRSFEDRVQMLLSLLSRYHVLEKFADEILGSEEMRQ--------PAAVGATSVPK------------------------AEVTEEVSGRGVTGNG---DDEDAEAAVDT-ARGGGSACASGREEEGTAELGH---------------------------------------------------------------------DDGRSLVR---PASFRFGFSTRSREECEEAFLELMLDERNREGRLLRRFLTMAQAKTSPPSSSSSAKAESLRSLSTGHSSSGAAYAAEVRRPAPRK-----------------------------AAAGSRPNASDAAATGGGAFSWIRRRPRGSGYPTSASNTGAAEVGNNPDACGAGIGAAGTKWGTTADAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSPQVVKAFINYFSQEYLVKIFDVPDILVPSLTELVTLLVFRQARRLVFGYDRRRVMASDRAWRDKAT 1999
+PDG+ P H V + + G G + SVSRSFSLLRASGARAMLPVK AL GDPE VEARE LTKYKA L+ A+A+AE T +RR++ ELLT ALA QE+DLRCWGY+SVL F+EHRR+ET+RAQLRV M+ERRE+VI+ K QEV +LLRS+PIIGPWTNK P G ES G R G GG F E AF+V+P DLLAFDEDLA RQRLV+CDRACAAAADAFAMKVV AGGL PRS EDR Q LLSLLSRYHVLE + G EE Q P +G T V + V E +GR + D+ D VD A G+ ++E+ + G D+ R V P + FS R++CE AF ELMLDERNREGRLLRRFLTMAQA SP AG N + AA T G R P G T+AS T +G G G + V PQVVKAFINYFS+EYLV +FDVPD LVP++T LV LLVFRQARRLVFGYDRRRV SD AWR+KA+
Sbjct: 38 EPDGSLRDDGLHVRPPHQLAVGEQVATASEGGAAGRDRDVSSSVSRSFSLLRASGARAMLPVKMALSGDPEAVEARESLTKYKATLSAAVAEAEGTTTSRREDLELLTAALAGQESDLRCWGYVSVLASFKEHRRRETNRAQLRVGMSERREEVITAKLQEVGRLLRSMPIIGPWTNK---PAGAETES----LGFRGG------IGGDGHFWEEAFAVSPGDLLAFDEDLALARQRLVACDRACAAAADAFAMKVVAAGGLEPRSPEDRAQALLSLLSRYHVLELGESVVSGEEETGQDQPTVKSSPQDLGGTQVEEDREEAGKQXXXXXXXXXXXXXXXXERVPAENTGRPIERRKTVEDEADQGKRVDEQANASGTISTGVQDEQAKGDEGEPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPPRAESDESRRSVDGWGPPAGSARFSRLGRKDCEVAFSELMLDERNREGRLLRRFLTMAQADKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAGDDKNGAGAAKTTG-------REP---GSATTASAT---------------VGKTGAVTGDGEEG----------------------------------EGPVGPQVVKAFINYFSKEYLVNMFDVPDFLVPTMTGLVALLVFRQARRLVFGYDRRRVAKSDEAWREKAS 727
BLAST of mRNA_P-fluviatile_contig11.1036.1 vs. uniprot
Match: D7FS46_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS46_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.250e-45 Identity = 107/192 (55.73%), Postives = 119/192 (61.98%), Query Frame = 2
Query: 2516 MLAVVKAGMMHLSEDSARISGSGKPLDADTLIPLLVHALVHADLPRVHEALNLLRNFRGPSWGGEAAYYVTCIEAAVSFTLDWRPAGTQTDLPLAPDDG------APAENVDNDSGSKVATTKTSQARRSGGSDXGDAAVAARWAAERASE------EEEKGREALMRLGIFLEKHEVQEDTVDVLASAGWL 3055
ML VVKAGM LSE++ARISGS KPLDAD+L+PLLVH+L HA+LPRVHEALN LRNF+G WGGE YYVTC+EAAVSF L W G D DDG D+ GSK K R G X E +KGREAL+RLGIFLEKHEVQEDTVDVL+SAGWL
Sbjct: 1 MLDVVKAGMTLLSEEAARISGSDKPLDADSLLPLLVHSLAHANLPRVHEALNFLRNFQGAGWGGEQEYYVTCLEAAVSFVLGW---GAAADPNADGDDGNXXXXXXXXXXXDSTKGSKAEAGKKLFGRGDGSGXXXXXXXXXXXXXXXXXXXXXXXXEPDKGREALVRLGIFLEKHEVQEDTVDVLSSAGWL 189
BLAST of mRNA_P-fluviatile_contig11.1036.1 vs. uniprot
Match: A0A7S2GUB1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUB1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 5.200e-18 Identity = 79/242 (32.64%), Postives = 114/242 (47.11%), Query Frame = 2
Query: 2381 AGDEMDKLDVGYTVPPTAHRIEECPAYGRASREFGRLGECLTPAKMLAVVKAGMMHLSEDSARISGSGKPLDADTLIPLLVHALVHADLPRVHEALNLLRNFRGPSWGGEAAYYVTCIEAAVSFTLDWRPAGTQTDLP---LAPDDGAPAENVDNDSGS-KVATTKTSQARRSGGSDXGDAAVAARWAAERASEEEEK-----GRE--------ALMRLGIFLEKHEVQEDTVDVLASAGWL 3055
AG+ M + T P R+ Y R S ++ C+ P +ML + A M L ++ I+G KPLDAD + P+LV A+VH+ LP +H + LRNF GEAAY++TC EAAVSF + Q DL A G NDS +V + RR+ A ++ E S +E+ G++ A+M+LG +L + EDT+DVL GW+
Sbjct: 76 AGEAMGRKTT--TAAPVPRRV-----YWRTSLLLSKMSICVVPLEMLHWLMAAMRMLHREATLIAGD-KPLDADVMFPILVLAIVHSKLPHMHSYIFFLRNFAIADTTGEAAYFLTCCEAAVSFVMKMDVPSDQRDLSRTTTATTVGQRGRIESNDSDDPEVGVSDEQSVRRT-----------AMYSRESVSSSDERTEGLDGKDWSNEGEAAAMMQLGHWLGAQQAMEDTIDVLEQEGWM 298
BLAST of mRNA_P-fluviatile_contig11.1036.1 vs. uniprot
Match: A0A6U0URX0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0URX0_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.880e-9 Identity = 54/199 (27.14%), Postives = 87/199 (43.72%), Query Frame = 2
Query: 2459 YGRASREFGRLGECLTPAKMLAVVKAGMMHLSEDSARISGSGKPLDADTLIPLLVHALVHADLPRVHEALNLLRNFRGPSWGGEAAYYVTCIEAAVSFTLDWRPAGTQTDLPLAPDDGAPAENVDNDSGSKVATTKTSQARRSGGSDXGDAAVAARWAAERASEEEEKGREALMRLGIFLEKHEVQEDTVDVLASAGWL 3055
+ R SR L C+TP+ M V+ M L ++ ISG L ADTL PL++ A+++A++P +H L+ F GE AYY TC+ A V + + A +++ D + S T T + + D + W E ++A+ LG +L + EDT++ L GW+
Sbjct: 298 FWRTSRYLSNLCACVTPSDMERVLLRAMRLLHGEAVLISGRRTALSADTLFPLILFAVINAEIPPMHSVLHFWNTFSRGDGRGEGAYYRTCVGAVVDYVM-------------AEGRSLASQSADGEEDS----TATERDEAAADDDMDE------WTPE-------AEKQAMQTLGEWLGAQKAMEDTIETLQQDGWM 466 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1036.1 >prot_P-fluviatile_contig11.1036.1 ID=prot_P-fluviatile_contig11.1036.1|Name=mRNA_P-fluviatile_contig11.1036.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=997bp MLQTMRMILRSQAEPTLAKVDPDGTEDTTFAEKSPQHATHVSRRGESGVRback to top mRNA from alignment at P-fluviatile_contig11:618333..637610- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1036.1 ID=mRNA_P-fluviatile_contig11.1036.1|Name=mRNA_P-fluviatile_contig11.1036.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=19278bp|location=Sequence derived from alignment at P-fluviatile_contig11:618333..637610- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:618333..637610- >mRNA_P-fluviatile_contig11.1036.1 ID=mRNA_P-fluviatile_contig11.1036.1|Name=mRNA_P-fluviatile_contig11.1036.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5982bp|location=Sequence derived from alignment at P-fluviatile_contig11:618333..637610- (Porterinema fluviatile SAG_2381)back to top |